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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052055 ID=TCONS_00052055|Name=TCONS_00052055|organism=Clytia hemisphaerica|type=transcript|length=670bp
TGTTCAGTTTCATTTGTCACAATATATGTCAGGCTGTATAACAAGTCTTC
ATCTGTAACAGCTGGATTTTTAAGTGTCTCCCTTAACTGCATCCGAATAC
TTTCGTTTCGCAGACCAGATATTACAGAAGTCTTGAACTTTCTATCAATG
ATTTGTTCTTCAAAGGGACAAGGGTCTGTGTGCGACACAGACTTGACTTT
TTGTCGCATGGCCATCAGTCTCATAACAAATTCATAAGCAGATTCCCcta
ctttttgtttttcagaCCCCAACGCAGAGAACAAAGAACTGGCATCCTGT
TCCCGGAAGTGTGACCGCAATACGATATAAAGATCATTAATCTTCATTGT
TGGCCGAGATTCAAGTGAACTTGATGTCCAGTGCTGTGGCGATGGACCAC
AATGTCTCCACATCTGCTTCAGCCACACCTCTCAAGACTTCGTGCACGAC
AGATTCCATGCTGTTTGCCCCGGATTGCACTGATACCACCAGATAATGCC
CAATAAGCAGAGATCAGCATGGGCATGTTGCTGACGTCATCCGTGCTGTT
CTACATGACTGTACCAACAGTACCAAACCACCCTCTGCTACCAAATGTAG
TAACCCGAAAGCTACTGAAAACGTTTGGTGGATGGTACTGGACAGAAGAA
ATTGAGAACACAAGTCATNN Run BLAST on NCBI transcript from alignment at scaffold_209:107609..108652- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052055 ID=TCONS_00052055|Name=TCONS_00052055|organism=Clytia hemisphaerica|type=transcript|length=1044bp|location=Sequence derived from alignment at scaffold_209:107609..108652- (Clytia hemisphaerica)
TGTTCAGTTTCATTTGTCACAATATATGTCAGGCTGTATAACAAGTCTTC
ATCTGTAACAGCTGGATTTTTAAGTGTCTCCCTTAACTGCATCCGAATAC
TTTCGTTTCGCAGACCAGATATTACAGAAGTCTTGAACTTTCTATCAATG
ATTTGTTCTTCAAAGGGACAAGGGTCTGTGTGCGACACAGACTTGACTTT
TTGTCGCATGGCCATCAGTCTCATAACAAATTCATAAGCAGATTCCCCTA
CTTTTTGTTTTTCAGACCCCAACGCAGAGAACAAAGAACTGGCATCCTGT
TCCCGGAAGTGTGACCGCAATACGATATAAAGATCATTAATCTTCATTGT
TGGCCGAGATTCAAGGTATGACCTCAAATAATTATCCGGTGTCGCAGCTT
TGATTACAGCATTAATTATGTCAGACTCCCCATATCCCTTCTTAATGCCA
CTTTCAATTTGGTACAACAAACTGCTGTATGATATACAGTCTTTCTCCCC
GTAACGTCCCAGCTTCCCAGTGATTTTGAATTCTCGCATAAACACTTTTC
TCATCTCTTCAAACTCATCAGATCTGGCAGAATTCCTGGAGTCATTTCCA
AGCCTCGAACGCCCAGGTGTAAAGGGATTACGGGAGATCCTTGGTACTGG
TTCAAAAGGGTTTGTGTTGTTCATCTTGGGTCTGTNATAGCGTAACACAA
AACGACGTAATTCAAATTCCTTACCCCTTGCCCTTTCAGTGAACTTGATG
TCCAGTGCTGTGGCGATGGACCACAATGTCTCCACATCTGCTTCAGCCAC
ACCTCTCAAGACTTCGTGCACGACAGATTCCATGCTGTTTGCCCCGGATT
GCACTGATACCACCAGATAATGCCCAATAAGCAGAGATCAGCATGGGCAT
GTTGCTGACGTCATCCGTGCTGTTCTACATGACTGTACCAACAGTACCAA
ACCACCCTCTGCTACCAAATGTAGTAACCCGAAAGCTACTGAAAACGTTT
GGTGGATGGTACTGGACAGAAGAAATTGAGAACACAAGTCATNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052055-exon-scaffold_209-1575043694:108288..108652 | TCONS_00052055-exon-scaffold_209-1575043694:108288..108652 | Clytia hemisphaerica | exon |
| TCONS_00052055-exon-scaffold_209-1575043694:107609..107913 | TCONS_00052055-exon-scaffold_209-1575043694:107609..107913 | Clytia hemisphaerica | exon |
| TCONS_00052055-exon-scaffold_209-1510915933:108288..108652 | TCONS_00052055-exon-scaffold_209-1510915933:108288..108652 | Clytia hemisphaerica | exon |
| TCONS_00052055-exon-scaffold_209-1510915933:107609..107913 | TCONS_00052055-exon-scaffold_209-1510915933:107609..107913 | Clytia hemisphaerica | exon |
| TCONS_00052055-exon-scaffold_209-1491911889:108288..108652 | TCONS_00052055-exon-scaffold_209-1491911889:108288..108652 | Clytia hemisphaerica | exon |
| TCONS_00052055-exon-scaffold_209-1491911889:107609..107913 | TCONS_00052055-exon-scaffold_209-1491911889:107609..107913 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_209 | supercontig | scaffold_209:107609..108652 - |
Blast
The following BLAST results are available for this feature:
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