TCONS_00052003 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052003
Unique NameTCONS_00052003
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1816

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052003 ID=TCONS_00052003|Name=TCONS_00052003|organism=Clytia hemisphaerica|type=transcript|length=1816bp
gaaaaatcctgaaaaaataacTACTACTGAATCAAAGACTCCTGGAGCAA
AGCAAACCAAGACAAAGAAAGAAATGGCTCCAAAGACTTTAAGCACATCT
CACACTAGGATTGGTTATAAGCAAGTGAAgGTAACCATTGAAACCATAGA
GAATGGgtcaacaaaaacaaagattGTCAATGGACTTGAAGCTATTGCTG
TTAAATTAATTTCCTTTGACATGAAAAAAGAAGCAATGGCAACTTTGTTG
AAACTCCCAGAGTATAAAAATCACCTCATTGAGTCGCTGATGAAATGCTG
TCTAGAAGAACTAACAGATTTGTCTTCAATGTCCTCAAATTCAATTTTGC
GCAAAACCGATGCACAATCaataaaacaattgaaagtTGATACTGTCTTT
AAAGAATTTACAACAAAAATTCCAACAATTACTAAAGTCATCAAGAAACT
AACCAAAGACAACAAATATTCTACCACGCAGATTTGTAATTCGATTGTCT
CTGCACACAATGAACATCTAAGTGCTCTGAGATACAAGAATGGTTTGTTT
TTCAGACAATGTGGTTTATTAAGAAAGGGACAAGAGGTGTTATGCCAGTC
CAAAATGTCCACACATCCAACAGCAATCAGAAAGAAACTAATTCAAATGG
GTGAAAATCATGATTCTAAAGCCAAAGACTGGAAAAGAGAGAAAGAGGAA
GCAGTAAGAAAAGGTGAATGCGGTTTTGATCCCCTTGTAGTTGGAGACAA
TTTGGATGGAGAAACCCAACCAAAACACCAGACTTTGACAAACACAAACa
aatcatttcattattttaacaTGTTTGCAGTAAAGGAAAAGGTCAACGGG
AGTCATTTGAGCAACAAGCGGAAAAGAGAAATGAAGGATGTTTCCCCAGA
AGAATTCTTGCCAACAAACAAAGAGCTGGATAAACTTGAGAAGGATTTTA
TAGTCCTTGCCGCAAGGGTTATTGTAAAGCAGATACCATCAATGCAAGAA
GTATTCAAGGATGCTGTTGTTCATCACATTAAACATCAATACTCGGAAGA
AATGGAAACAAAATCTGAACAGGTACCATTAGGAGCTTATGCCCTTAATG
AAAATAAGCATGAAGACATGATCGAAATCATTGAACGCATACAAGAAAGA
TATGTTCCAAAAGATGAATCTGGAGACGGTGTAACTTTCTTTGGTGGTGA
CCAGTTGACAGAAGAAAGGTCAAGATCTGCTCAAAATGCCCGTGCGGATG
GAAGAACTGTAGAAGAATGACTCCAGGGACTATTGCCTAAATTTGAAGAC
TGGCATGCTATCAGGACTGCTTATGATTCTGCGTTGAAAGTATTCTACAG
CAAAGAGGCAACTGGTGATGCTGGAACCTACCTGACAAACGCGATAAAAA
CAGGCAACAAAAATGCTCTGAGGAAAGTAGAGGACAAGTTTCAAGAGGTC
CGGGAGTTTTTTGACATTGAAACAAAGGCATTACTGTTGTCTGGATTTCT
GAAACAAGAAGgttttgaaaacattGAGGACTACCTTCAACCACAGGACC
TATTAACAAAAGATGTCAAAACACAAAGGAGATGGCTTCATGGAAGAATt
cgtttatttttgaaagataaCATAATGGGATCATTGCAATCTTTAACCAA
AATGCTCCCAGAACAAAGAACTCACAAATGCCGTGATGCTACCTGTAACA
AAAGATTCTTCTTCCTACCTGCTAAGAACATGCACGAGCAACGAGAGCAT
GGGCTTGAACCTTTGACTTCATTACCATCCTCAGAGAAAGAATTAGTAGA
TGACGATTTATTCAAA
Run BLAST on NCBI

protein sequence of TCONS_00052003-protein

>TCONS_00052003-protein ID=TCONS_00052003-protein|Name=TCONS_00052003-protein|organism=Clytia hemisphaerica|type=polypeptide|length=422bp
KNPEKITTTESKTPGAKQTKTKKEMAPKTLSTSHTRIGYKQVKVTIETIE
NGSTKTKIVNGLEAIAVKLISFDMKKEAMATLLKLPEYKNHLIESLMKCC
LEELTDLSSMSSNSILRKTDAQSIKQLKVDTVFKEFTTKIPTITKVIKKL
TKDNKYSTTQICNSIVSAHNEHLSALRYKNGLFFRQCGLLRKGQEVLCQS
KMSTHPTAIRKKLIQMGENHDSKAKDWKREKEEAVRKGECGFDPLVVGDN
LDGETQPKHQTLTNTNKSFHYFNMFAVKEKVNGSHLSNKRKREMKDVSPE
EFLPTNKELDKLEKDFIVLAARVIVKQIPSMQEVFKDAVVHHIKHQYSEE
METKSEQVPLGAYALNENKHEDMIEIIERIQERYVPKDESGDGVTFFGGD
QLTEERSRSAQNARADGRTVEE
Run BLAST on NCBI

transcript from alignment at scaffold_208:546783..551778-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052003 ID=TCONS_00052003|Name=TCONS_00052003|organism=Clytia hemisphaerica|type=transcript|length=4996bp|location=Sequence derived from alignment at scaffold_208:546783..551778- (Clytia hemisphaerica)
GAAAAATCCTGAAAAAATAACTACTACTGAATCAAAGACTCCTGGAGCAA
AGCAAACCAAGACAAAGAAAGAAATGGCTCCAAAGACTTTAAGCACATCT
CACACTAGGATTGGTTATAAGCAAGTGAAGGTAATTTAAAACTTTTGGAC
AAATATTCACATCAACAAAAAGATTACCTTATTGAAACTAATTTTCACGG
GAATTGATTTTAGCGTTTTCAAGCCAAAAATGGGCAAAACCGCAAAAATT
AAAACCCACAAAAATTCCAGAATGAAAAAAACCGCAAAAATTAAATCCAG
CGAAATGCAATTTTTTGATATTTTTTTTCAACCCCAAAAATTAGTTCCCC
GCAAAAATTAGTTCCAAGGTATTGATCTTTAATTCTCCTAATCCTTGGGT
ACAATATTTTAGCAGCATGCATTAGTAGAAATTGAAGTAGAAAAGTAAGT
ATTTGAATTTAGATTACATTTTCAAAAATATCAGAATGAGACAAATAATT
TATGATATTTTTTAGTTCCTAACTAATAATATTTTAGGTAACCATTGAAA
CCATAGAGAATGGGTCAACAAAAACAAAGATTGTCAATGGACTTGAAGCT
ATTGCTGTTAAATTAATTTCCTTTGACATGAAAAAAGGTTAGTGCTTTGA
AAACTAAGCTTTACAGTAACTTATTATCGAATTTTTTAGTACTTTGATTA
TGATTTTAGAACAAGTAGTATTTCTAAACATGAAAACGTTATTGAATAAT
GATTTGTCCTGACCAGGAATCGAACCTGGACCAATCATAACATTAGTGCA
TGATTATCATGTATCATTAGACTATCAGGGCTTTTCTTTTCTTTGCCATT
GCTTTCTGAAACTTATAAAAATTACAATATTATATAACCATCACCTTTAG
AAGCAATGGCAACTTTGTTGAAACTCCCAGAGTATAAAAATCACCTCATT
GAGTCGCTGATGAAATGCTGTCTAGAAGAACTAACAGATTTGTCTTCAAT
GTCCTCAAATTCAATTTTGCGCAAAACCGATGCACAATCAATAAAACAAT
TGAAAGTTGATACTGTCTTTAAAGAATTTACAACAAAAATTCCAACAATT
ACTAAAGTCATCAAGAAACTAACCAAAGACAACAAATATTCTACCACGCA
GATTTGTAATTCGATTGTCTCTGCACACAATGAACATCTAAGTGCTCTGA
GATACAAGAATGGTTTGTTTTTCAGACAATGTGGTTTATTAAGAAAGGTA
AAAATGATATTTAAAAGTTGATATACAATATATACAAATACAATAAACAG
TAAAATAAACCAACAAATTTTAAGGTCAAAAGGAATCAAAAAAAGTTGAT
AAATATACTTAAATGGGATAAACTTTTGCGGGAATTAAATTTTGCCGATT
TTGCAGATTTGGGTGTCATCCGCGAAAATCCGCAAAATTAAGTCCCAATG
GAAATTTGGAAGGGGCTCATCCGCGAAATATTTCTAAACAAAACTCAAAA
TATGTCAAATAAATACTATTTCAATGGCTACTTGCATCAAAGAAATCAAA
TAATGCAAGGTTCAACAACCAACATGCATTATTTGACAGTAAAAGTCACG
AAATCGTGAAAAACCGCGAAATTTAATCCCCGCAAAAGTTTACCCCATCA
AAGTACATACAAAGCAAAAACAGAAGTAGACATTTTACAGTTATTTTTCT
AAAATTCATTGATTATTATATATATGCATGAAATATTGAAAATGCCATTA
TCTTTCATTGTGGGAATATTTATTTTATTGCTAAATCTTTTATCTTTTGT
CAATGCATTACAAAAATTATTTTTTACTTCGCTTCAAAATCTATCTTAGG
GACAAGAGGTGTTATGCCAGTCCAAAATGTCCACACATCCAACAGCAATC
AGAAAGAAACTAATTCAAATGGGTGAAAATCATGATTCTAAAGCCAAAGA
CTGGAAAAGAGAGGTAAACCAATATAAATATTTGTACTAATGCAGAAATT
TGGGTAACTTCTGAAAAATTTCATGTTTCAATAATTCTTAGTGACTAGTG
TGTATATAACTTTTTATTTGAATAATTTTTTCCACATGTACTAAAGTAAA
GTACTATATATAAATCTATGCAGTGCAAAATAAAAGAAGAATTTGTTTTA
ACATAAACTCTATGTTCTCTCTTTACAGAAAGAGGAAGCAGTAAGAAAAG
GTGAATGCGGTTTTGATCCCCTTGTAGTTGGAGACAATTTGGATGGAGAA
ACCCAACCAAAACACCAGACTTTGACAAACACAAACAAATCATTTCATTA
TTTTAACATGTTTGCAGTAAAGGAAAAGGTGAACCTCCTTTTTAAACTTA
GAATAAACATTTTTCATATTGAATTTTGGTTTCATATGGTTATTTGTGTG
TGTTATTATTACACTCTTTTAAAGGCATATCACTAACAGTGTACTGCATT
ATAAACTATAAATTTGATGGAAAATCAGGTAAAATGGTAGAATGTTGAAC
ACACTACACTAGTTTCCAGTTAAATGAGTTTTTTTATATTATTTCAAGGT
CAACGGGAGTCATTTGAGCAACAAGCGGAAAAGAGAAATGAAGGATGTTT
CCCCAGAAGAATTCTTGCCAACAAACAAAGAGCTGGATAAACTTGAGAAG
GATTTTATAGTCCTTGCCGCAAGGGTTATTGTAAAGCAGATACCATCAAT
GCAAGAAGTATTCAAGGATGCTGTTGTTCATCACATTAAACATCAATACT
CGGAAGAAATGGAAACAAAATCTGAACAGGTTATAAACATTATAACAATG
ATATTATTTGGATGAGGTTATCATAAGACTTCTATCATCTAAATTCTGAT
ATAAAATTCTGGTTGGGCGTAAGTAAAACTTTTTAAAGAATTAGCTTTTC
AAACCTAACAAAAGCAGGAAATGTGAATGTCATGAGCAGAATTTAATTGT
AGCTTTGTGTTTAATTTTAAGGTACCATTAGGAGCTTATGCCCTTAATGA
AAATAAGCATGAAGACATGATCGAAATCATTGAACGCATACAAGAAAGGT
ACAATGCACGATTATTTTTTAATAGAATTAAATAGCAAAAACTTCAGGAT
TTCTTTTTTGCAAATTAAACATCAAATCTGTTGAGAGTGGACCTAAGACT
TATAAAATACTTACTGTGAAAAAAGAAATTACAGGGTACTTGTGGTAACA
ATCTGATAAAAAAATTTCATTTGGATTTAAATTTGCACATTTTTCAAAAG
ATTTCTTTTTTATATAAAAATTTGCAAAAGCGCCAAATTAAATCTGTATC
TTTTAACTTATACATTTTTTAATCACCATACTGACTACAGTTTTATACAG
GTTATCCTTGATCAATATTTTAGCTTTTATAATGCTTTAATCCCCTTATA
TTTTATTATAAAGATATGTTCCAAAAGATGAATCTGGAGACGGTGTAACT
TTCTTTGGTGGTGACCAGTTGACAGAAGAAAGGTCAAGATCTGCTCAAAA
TGCCCGTGCGGATGGAAGAACTGTAGAAGAATGACTCCAGGGACTATTGC
CTAAATTTGAAGACTGGCATGCTATCAGGACTGCTTATGATGTATGTCTG
TAAAAACTTTTTTTAAATCTTTGAAAACCCTTTTTTTTTACAAAACATGG
GAGATGTACATCCTAATAAAATTGAGGGAAGATGTATTTACAGCTTGGAG
TTCAAATTTTTTGTAACAATTGAAGGCTTTTAGTTTGAAAAAAAAAACCA
AGCCCTTAAGAAAACACATCTTTGAAGAATTTGACTTTACTATAATTTTA
ATTTTGATTCATTTCTACCTATACTCAGTCTGCGTTGAAAGTATTCTACA
GCAAAGAGGCAACTGGTGATGCTGGAACCTACCTGACAAACGCGATAAAA
ACAGGCAACAAAAATGCTCTGAGGAAAGTAGAGGACAAGTTTCAAGAGGT
CCGGGAGTTTTTTGACATTGAAACAAAGGCATTACTGTTGTCTGGATTTC
TGAAACAAGAAGGTATGTTTTAAGAAATGGTTTATTAGCTTGAAATAAGT
TTTTGAATTGTACTGATTTTAAAGCTTGCCAAGAAGTGCCAGGAAGTGAG
AACTCTCCCCTCAGAGTGTTGATTTCCCTGCATCATTTTATATTTACTGT
TTTGAGAAGAAACAAAAAACAGTTTTACTTCTACTAAAGGGACTAACTAT
TCTCATTTCTTTGAAAAAGGTTTTGAAAACATTGAGGACTACCTTCAACC
ACAGGACCTATTAACAAAAGATGTCAAAACACAAAGGAGATGGCTTCATG
GAAGAATTCGTTTATTTTTGAAAGATAACATAATGGGATCATTGCAATCT
TTAACCAAAATGCTCCCAGAACAAAGAACTCACAAATGCCGTGATGCTAC
CTGTAACAAAGTAAATACAACCCATTTTTTATTACCTTAAGGGAAGAAAT
TTTTGCGAGAAGAAATTTTCGCGGAAGAAATTTTCGCGGAAGAAATTTTC
GCGGAATTTAATTTCGCGAATTTGGGCGTAATTCGCGAAATTTAATTCCG
TGAAACTTTTGAAATCGGCTCATTCGCGAAATTAAATTCCGCGAAATTTG
CCATTTTGAAACTCTGATTCGCGAAATTAAATTCCGCGAAATTTGCCATT
TTGAAACTCTGATTCGCGAAATTAAATTCCGCGAAAATTTCTTCTCGCGA
AAATTTCTTCCCTTAAGGTACTTTCATCATCCTGTTGCTTGATTACATGT
TATGCTTTTAAAAAGCCTTCAACTGTCCCTTAAATTTACTATAACAAAAA
TCAGATGTAAAGCCCATTCAAAAAATCAGACCTGTATTTTTCCTTTTTCC
ATTTTAAATTATTTCTTATTCCTTGACAACAGAGATTCTTCTTCCTACCT
GCTAAGAACATGCACGAGCAACGAGAGCATGGGCTTGAACCTTTGACTTC
ATTACCATCCTCAGAGAAAGAATTAGTAGATGACGATTTATTCAAA

Coding sequence (CDS) from alignment at scaffold_208:546783..551778-

>TCONS_00052003 ID=TCONS_00052003|Name=TCONS_00052003|organism=Clytia hemisphaerica|type=CDS|length=10152bp|location=Sequence derived from alignment at scaffold_208:546783..551778- (Clytia hemisphaerica)
ATATGTTCCAAAAGATGAATCTGGAGACGGTGTAACTTTCTTTGGTGGTG
ACCAGTTGACAGAAGAAAGGTCAAGATCTGCTCAAAATGCCCGTGCGGAT
GGAAGAACTGTAGAAGAATGAGTACCATTAGGAGCTTATGCCCTTAATGA
AAATAAGCATGAAGACATGATCGAAATCATTGAACGCATACAAGAAAGGT
CAACGGGAGTCATTTGAGCAACAAGCGGAAAAGAGAAATGAAGGATGTTT
CCCCAGAAGAATTCTTGCCAACAAACAAAGAGCTGGATAAACTTGAGAAG
GATTTTATAGTCCTTGCCGCAAGGGTTATTGTAAAGCAGATACCATCAAT
GCAAGAAGTATTCAAGGATGCTGTTGTTCATCACATTAAACATCAATACT
CGGAAGAAATGGAAACAAAATCTGAACAGAAAGAGGAAGCAGTAAGAAAA
GGTGAATGCGGTTTTGATCCCCTTGTAGTTGGAGACAATTTGGATGGAGA
AACCCAACCAAAACACCAGACTTTGACAAACACAAACAAATCATTTCATT
ATTTTAACATGTTTGCAGTAAAGGAAAAGGGACAAGAGGTGTTATGCCAG
TCCAAAATGTCCACACATCCAACAGCAATCAGAAAGAAACTAATTCAAAT
GGGTGAAAATCATGATTCTAAAGCCAAAGACTGGAAAAGAGAGAAGCAAT
GGCAACTTTGTTGAAACTCCCAGAGTATAAAAATCACCTCATTGAGTCGC
TGATGAAATGCTGTCTAGAAGAACTAACAGATTTGTCTTCAATGTCCTCA
AATTCAATTTTGCGCAAAACCGATGCACAATCAATAAAACAATTGAAAGT
TGATACTGTCTTTAAAGAATTTACAACAAAAATTCCAACAATTACTAAAG
TCATCAAGAAACTAACCAAAGACAACAAATATTCTACCACGCAGATTTGT
AATTCGATTGTCTCTGCACACAATGAACATCTAAGTGCTCTGAGATACAA
GAATGGTTTGTTTTTCAGACAATGTGGTTTATTAAGAAAGGTAACCATTG
AAACCATAGAGAATGGGTCAACAAAAACAAAGATTGTCAATGGACTTGAA
GCTATTGCTGTTAAATTAATTTCCTTTGACATGAAAAAAGAAAAATCCTG
AAAAAATAACTACTACTGAATCAAAGACTCCTGGAGCAAAGCAAACCAAG
ACAAAGAAAGAAATGGCTCCAAAGACTTTAAGCACATCTCACACTAGGAT
TGGTTATAAGCAAGTGAAGATATGTTCCAAAAGATGAATCTGGAGACGGT
GTAACTTTCTTTGGTGGTGACCAGTTGACAGAAGAAAGGTCAAGATCTGC
TCAAAATGCCCGTGCGGATGGAAGAACTGTAGAAGAATGAGTACCATTAG
GAGCTTATGCCCTTAATGAAAATAAGCATGAAGACATGATCGAAATCATT
GAACGCATACAAGAAAGGTCAACGGGAGTCATTTGAGCAACAAGCGGAAA
AGAGAAATGAAGGATGTTTCCCCAGAAGAATTCTTGCCAACAAACAAAGA
GCTGGATAAACTTGAGAAGGATTTTATAGTCCTTGCCGCAAGGGTTATTG
TAAAGCAGATACCATCAATGCAAGAAGTATTCAAGGATGCTGTTGTTCAT
CACATTAAACATCAATACTCGGAAGAAATGGAAACAAAATCTGAACAGAA
AGAGGAAGCAGTAAGAAAAGGTGAATGCGGTTTTGATCCCCTTGTAGTTG
GAGACAATTTGGATGGAGAAACCCAACCAAAACACCAGACTTTGACAAAC
ACAAACAAATCATTTCATTATTTTAACATGTTTGCAGTAAAGGAAAAGGG
ACAAGAGGTGTTATGCCAGTCCAAAATGTCCACACATCCAACAGCAATCA
GAAAGAAACTAATTCAAATGGGTGAAAATCATGATTCTAAAGCCAAAGAC
TGGAAAAGAGAGAAGCAATGGCAACTTTGTTGAAACTCCCAGAGTATAAA
AATCACCTCATTGAGTCGCTGATGAAATGCTGTCTAGAAGAACTAACAGA
TTTGTCTTCAATGTCCTCAAATTCAATTTTGCGCAAAACCGATGCACAAT
CAATAAAACAATTGAAAGTTGATACTGTCTTTAAAGAATTTACAACAAAA
ATTCCAACAATTACTAAAGTCATCAAGAAACTAACCAAAGACAACAAATA
TTCTACCACGCAGATTTGTAATTCGATTGTCTCTGCACACAATGAACATC
TAAGTGCTCTGAGATACAAGAATGGTTTGTTTTTCAGACAATGTGGTTTA
TTAAGAAAGGTAACCATTGAAACCATAGAGAATGGGTCAACAAAAACAAA
GATTGTCAATGGACTTGAAGCTATTGCTGTTAAATTAATTTCCTTTGACA
TGAAAAAAGAAAAATCCTGAAAAAATAACTACTACTGAATCAAAGACTCC
TGGAGCAAAGCAAACCAAGACAAAGAAAGAAATGGCTCCAAAGACTTTAA
GCACATCTCACACTAGGATTGGTTATAAGCAAGTGAAGATATGTTCCAAA
AGATGAATCTGGAGACGGTGTAACTTTCTTTGGTGGTGACCAGTTGACAG
AAGAAAGGTCAAGATCTGCTCAAAATGCCCGTGCGGATGGAAGAACTGTA
GAAGAATGAGTACCATTAGGAGCTTATGCCCTTAATGAAAATAAGCATGA
AGACATGATCGAAATCATTGAACGCATACAAGAAAGGTCAACGGGAGTCA
TTTGAGCAACAAGCGGAAAAGAGAAATGAAGGATGTTTCCCCAGAAGAAT
TCTTGCCAACAAACAAAGAGCTGGATAAACTTGAGAAGGATTTTATAGTC
CTTGCCGCAAGGGTTATTGTAAAGCAGATACCATCAATGCAAGAAGTATT
CAAGGATGCTGTTGTTCATCACATTAAACATCAATACTCGGAAGAAATGG
AAACAAAATCTGAACAGAAAGAGGAAGCAGTAAGAAAAGGTGAATGCGGT
TTTGATCCCCTTGTAGTTGGAGACAATTTGGATGGAGAAACCCAACCAAA
ACACCAGACTTTGACAAACACAAACAAATCATTTCATTATTTTAACATGT
TTGCAGTAAAGGAAAAGGGACAAGAGGTGTTATGCCAGTCCAAAATGTCC
ACACATCCAACAGCAATCAGAAAGAAACTAATTCAAATGGGTGAAAATCA
TGATTCTAAAGCCAAAGACTGGAAAAGAGAGAAGCAATGGCAACTTTGTT
GAAACTCCCAGAGTATAAAAATCACCTCATTGAGTCGCTGATGAAATGCT
GTCTAGAAGAACTAACAGATTTGTCTTCAATGTCCTCAAATTCAATTTTG
CGCAAAACCGATGCACAATCAATAAAACAATTGAAAGTTGATACTGTCTT
TAAAGAATTTACAACAAAAATTCCAACAATTACTAAAGTCATCAAGAAAC
TAACCAAAGACAACAAATATTCTACCACGCAGATTTGTAATTCGATTGTC
TCTGCACACAATGAACATCTAAGTGCTCTGAGATACAAGAATGGTTTGTT
TTTCAGACAATGTGGTTTATTAAGAAAGGTAACCATTGAAACCATAGAGA
ATGGGTCAACAAAAACAAAGATTGTCAATGGACTTGAAGCTATTGCTGTT
AAATTAATTTCCTTTGACATGAAAAAAGAAAAATCCTGAAAAAATAACTA
CTACTGAATCAAAGACTCCTGGAGCAAAGCAAACCAAGACAAAGAAAGAA
ATGGCTCCAAAGACTTTAAGCACATCTCACACTAGGATTGGTTATAAGCA
AGTGAAGATATGTTCCAAAAGATGAATCTGGAGACGGTGTAACTTTCTTT
GGTGGTGACCAGTTGACAGAAGAAAGGTCAAGATCTGCTCAAAATGCCCG
TGCGGATGGAAGAACTGTAGAAGAATGAGTACCATTAGGAGCTTATGCCC
TTAATGAAAATAAGCATGAAGACATGATCGAAATCATTGAACGCATACAA
GAAAGGTCAACGGGAGTCATTTGAGCAACAAGCGGAAAAGAGAAATGAAG
GATGTTTCCCCAGAAGAATTCTTGCCAACAAACAAAGAGCTGGATAAACT
TGAGAAGGATTTTATAGTCCTTGCCGCAAGGGTTATTGTAAAGCAGATAC
CATCAATGCAAGAAGTATTCAAGGATGCTGTTGTTCATCACATTAAACAT
CAATACTCGGAAGAAATGGAAACAAAATCTGAACAGAAAGAGGAAGCAGT
AAGAAAAGGTGAATGCGGTTTTGATCCCCTTGTAGTTGGAGACAATTTGG
ATGGAGAAACCCAACCAAAACACCAGACTTTGACAAACACAAACAAATCA
TTTCATTATTTTAACATGTTTGCAGTAAAGGAAAAGGGACAAGAGGTGTT
ATGCCAGTCCAAAATGTCCACACATCCAACAGCAATCAGAAAGAAACTAA
TTCAAATGGGTGAAAATCATGATTCTAAAGCCAAAGACTGGAAAAGAGAG
AAGCAATGGCAACTTTGTTGAAACTCCCAGAGTATAAAAATCACCTCATT
GAGTCGCTGATGAAATGCTGTCTAGAAGAACTAACAGATTTGTCTTCAAT
GTCCTCAAATTCAATTTTGCGCAAAACCGATGCACAATCAATAAAACAAT
TGAAAGTTGATACTGTCTTTAAAGAATTTACAACAAAAATTCCAACAATT
ACTAAAGTCATCAAGAAACTAACCAAAGACAACAAATATTCTACCACGCA
GATTTGTAATTCGATTGTCTCTGCACACAATGAACATCTAAGTGCTCTGA
GATACAAGAATGGTTTGTTTTTCAGACAATGTGGTTTATTAAGAAAGGTA
ACCATTGAAACCATAGAGAATGGGTCAACAAAAACAAAGATTGTCAATGG
ACTTGAAGCTATTGCTGTTAAATTAATTTCCTTTGACATGAAAAAAGAAA
AATCCTGAAAAAATAACTACTACTGAATCAAAGACTCCTGGAGCAAAGCA
AACCAAGACAAAGAAAGAAATGGCTCCAAAGACTTTAAGCACATCTCACA
CTAGGATTGGTTATAAGCAAGTGAAGATATGTTCCAAAAGATGAATCTGG
AGACGGTGTAACTTTCTTTGGTGGTGACCAGTTGACAGAAGAAAGGTCAA
GATCTGCTCAAAATGCCCGTGCGGATGGAAGAACTGTAGAAGAATGAGTA
CCATTAGGAGCTTATGCCCTTAATGAAAATAAGCATGAAGACATGATCGA
AATCATTGAACGCATACAAGAAAGGTCAACGGGAGTCATTTGAGCAACAA
GCGGAAAAGAGAAATGAAGGATGTTTCCCCAGAAGAATTCTTGCCAACAA
ACAAAGAGCTGGATAAACTTGAGAAGGATTTTATAGTCCTTGCCGCAAGG
GTTATTGTAAAGCAGATACCATCAATGCAAGAAGTATTCAAGGATGCTGT
TGTTCATCACATTAAACATCAATACTCGGAAGAAATGGAAACAAAATCTG
AACAGAAAGAGGAAGCAGTAAGAAAAGGTGAATGCGGTTTTGATCCCCTT
GTAGTTGGAGACAATTTGGATGGAGAAACCCAACCAAAACACCAGACTTT
GACAAACACAAACAAATCATTTCATTATTTTAACATGTTTGCAGTAAAGG
AAAAGGGACAAGAGGTGTTATGCCAGTCCAAAATGTCCACACATCCAACA
GCAATCAGAAAGAAACTAATTCAAATGGGTGAAAATCATGATTCTAAAGC
CAAAGACTGGAAAAGAGAGAAGCAATGGCAACTTTGTTGAAACTCCCAGA
GTATAAAAATCACCTCATTGAGTCGCTGATGAAATGCTGTCTAGAAGAAC
TAACAGATTTGTCTTCAATGTCCTCAAATTCAATTTTGCGCAAAACCGAT
GCACAATCAATAAAACAATTGAAAGTTGATACTGTCTTTAAAGAATTTAC
AACAAAAATTCCAACAATTACTAAAGTCATCAAGAAACTAACCAAAGACA
ACAAATATTCTACCACGCAGATTTGTAATTCGATTGTCTCTGCACACAAT
GAACATCTAAGTGCTCTGAGATACAAGAATGGTTTGTTTTTCAGACAATG
TGGTTTATTAAGAAAGGTAACCATTGAAACCATAGAGAATGGGTCAACAA
AAACAAAGATTGTCAATGGACTTGAAGCTATTGCTGTTAAATTAATTTCC
TTTGACATGAAAAAAGAAAAATCCTGAAAAAATAACTACTACTGAATCAA
AGACTCCTGGAGCAAAGCAAACCAAGACAAAGAAAGAAATGGCTCCAAAG
ACTTTAAGCACATCTCACACTAGGATTGGTTATAAGCAAGTGAAGATATG
TTCCAAAAGATGAATCTGGAGACGGTGTAACTTTCTTTGGTGGTGACCAG
TTGACAGAAGAAAGGTCAAGATCTGCTCAAAATGCCCGTGCGGATGGAAG
AACTGTAGAAGAATGAGTACCATTAGGAGCTTATGCCCTTAATGAAAATA
AGCATGAAGACATGATCGAAATCATTGAACGCATACAAGAAAGGTCAACG
GGAGTCATTTGAGCAACAAGCGGAAAAGAGAAATGAAGGATGTTTCCCCA
GAAGAATTCTTGCCAACAAACAAAGAGCTGGATAAACTTGAGAAGGATTT
TATAGTCCTTGCCGCAAGGGTTATTGTAAAGCAGATACCATCAATGCAAG
AAGTATTCAAGGATGCTGTTGTTCATCACATTAAACATCAATACTCGGAA
GAAATGGAAACAAAATCTGAACAGAAAGAGGAAGCAGTAAGAAAAGGTGA
ATGCGGTTTTGATCCCCTTGTAGTTGGAGACAATTTGGATGGAGAAACCC
AACCAAAACACCAGACTTTGACAAACACAAACAAATCATTTCATTATTTT
AACATGTTTGCAGTAAAGGAAAAGGGACAAGAGGTGTTATGCCAGTCCAA
AATGTCCACACATCCAACAGCAATCAGAAAGAAACTAATTCAAATGGGTG
AAAATCATGATTCTAAAGCCAAAGACTGGAAAAGAGAGAAGCAATGGCAA
CTTTGTTGAAACTCCCAGAGTATAAAAATCACCTCATTGAGTCGCTGATG
AAATGCTGTCTAGAAGAACTAACAGATTTGTCTTCAATGTCCTCAAATTC
AATTTTGCGCAAAACCGATGCACAATCAATAAAACAATTGAAAGTTGATA
CTGTCTTTAAAGAATTTACAACAAAAATTCCAACAATTACTAAAGTCATC
AAGAAACTAACCAAAGACAACAAATATTCTACCACGCAGATTTGTAATTC
GATTGTCTCTGCACACAATGAACATCTAAGTGCTCTGAGATACAAGAATG
GTTTGTTTTTCAGACAATGTGGTTTATTAAGAAAGGTAACCATTGAAACC
ATAGAGAATGGGTCAACAAAAACAAAGATTGTCAATGGACTTGAAGCTAT
TGCTGTTAAATTAATTTCCTTTGACATGAAAAAAGAAAAATCCTGAAAAA
ATAACTACTACTGAATCAAAGACTCCTGGAGCAAAGCAAACCAAGACAAA
GAAAGAAATGGCTCCAAAGACTTTAAGCACATCTCACACTAGGATTGGTT
ATAAGCAAGTGAAGATATGTTCCAAAAGATGAATCTGGAGACGGTGTAAC
TTTCTTTGGTGGTGACCAGTTGACAGAAGAAAGGTCAAGATCTGCTCAAA
ATGCCCGTGCGGATGGAAGAACTGTAGAAGAATGAGTACCATTAGGAGCT
TATGCCCTTAATGAAAATAAGCATGAAGACATGATCGAAATCATTGAACG
CATACAAGAAAGGTCAACGGGAGTCATTTGAGCAACAAGCGGAAAAGAGA
AATGAAGGATGTTTCCCCAGAAGAATTCTTGCCAACAAACAAAGAGCTGG
ATAAACTTGAGAAGGATTTTATAGTCCTTGCCGCAAGGGTTATTGTAAAG
CAGATACCATCAATGCAAGAAGTATTCAAGGATGCTGTTGTTCATCACAT
TAAACATCAATACTCGGAAGAAATGGAAACAAAATCTGAACAGAAAGAGG
AAGCAGTAAGAAAAGGTGAATGCGGTTTTGATCCCCTTGTAGTTGGAGAC
AATTTGGATGGAGAAACCCAACCAAAACACCAGACTTTGACAAACACAAA
CAAATCATTTCATTATTTTAACATGTTTGCAGTAAAGGAAAAGGGACAAG
AGGTGTTATGCCAGTCCAAAATGTCCACACATCCAACAGCAATCAGAAAG
AAACTAATTCAAATGGGTGAAAATCATGATTCTAAAGCCAAAGACTGGAA
AAGAGAGAAGCAATGGCAACTTTGTTGAAACTCCCAGAGTATAAAAATCA
CCTCATTGAGTCGCTGATGAAATGCTGTCTAGAAGAACTAACAGATTTGT
CTTCAATGTCCTCAAATTCAATTTTGCGCAAAACCGATGCACAATCAATA
AAACAATTGAAAGTTGATACTGTCTTTAAAGAATTTACAACAAAAATTCC
AACAATTACTAAAGTCATCAAGAAACTAACCAAAGACAACAAATATTCTA
CCACGCAGATTTGTAATTCGATTGTCTCTGCACACAATGAACATCTAAGT
GCTCTGAGATACAAGAATGGTTTGTTTTTCAGACAATGTGGTTTATTAAG
AAAGGTAACCATTGAAACCATAGAGAATGGGTCAACAAAAACAAAGATTG
TCAATGGACTTGAAGCTATTGCTGTTAAATTAATTTCCTTTGACATGAAA
AAAGAAAAATCCTGAAAAAATAACTACTACTGAATCAAAGACTCCTGGAG
CAAAGCAAACCAAGACAAAGAAAGAAATGGCTCCAAAGACTTTAAGCACA
TCTCACACTAGGATTGGTTATAAGCAAGTGAAGATATGTTCCAAAAGATG
AATCTGGAGACGGTGTAACTTTCTTTGGTGGTGACCAGTTGACAGAAGAA
AGGTCAAGATCTGCTCAAAATGCCCGTGCGGATGGAAGAACTGTAGAAGA
ATGAGTACCATTAGGAGCTTATGCCCTTAATGAAAATAAGCATGAAGACA
TGATCGAAATCATTGAACGCATACAAGAAAGGTCAACGGGAGTCATTTGA
GCAACAAGCGGAAAAGAGAAATGAAGGATGTTTCCCCAGAAGAATTCTTG
CCAACAAACAAAGAGCTGGATAAACTTGAGAAGGATTTTATAGTCCTTGC
CGCAAGGGTTATTGTAAAGCAGATACCATCAATGCAAGAAGTATTCAAGG
ATGCTGTTGTTCATCACATTAAACATCAATACTCGGAAGAAATGGAAACA
AAATCTGAACAGAAAGAGGAAGCAGTAAGAAAAGGTGAATGCGGTTTTGA
TCCCCTTGTAGTTGGAGACAATTTGGATGGAGAAACCCAACCAAAACACC
AGACTTTGACAAACACAAACAAATCATTTCATTATTTTAACATGTTTGCA
GTAAAGGAAAAGGGACAAGAGGTGTTATGCCAGTCCAAAATGTCCACACA
TCCAACAGCAATCAGAAAGAAACTAATTCAAATGGGTGAAAATCATGATT
CTAAAGCCAAAGACTGGAAAAGAGAGAAGCAATGGCAACTTTGTTGAAAC
TCCCAGAGTATAAAAATCACCTCATTGAGTCGCTGATGAAATGCTGTCTA
GAAGAACTAACAGATTTGTCTTCAATGTCCTCAAATTCAATTTTGCGCAA
AACCGATGCACAATCAATAAAACAATTGAAAGTTGATACTGTCTTTAAAG
AATTTACAACAAAAATTCCAACAATTACTAAAGTCATCAAGAAACTAACC
AAAGACAACAAATATTCTACCACGCAGATTTGTAATTCGATTGTCTCTGC
ACACAATGAACATCTAAGTGCTCTGAGATACAAGAATGGTTTGTTTTTCA
GACAATGTGGTTTATTAAGAAAGGTAACCATTGAAACCATAGAGAATGGG
TCAACAAAAACAAAGATTGTCAATGGACTTGAAGCTATTGCTGTTAAATT
AATTTCCTTTGACATGAAAAAAGAAAAATCCTGAAAAAATAACTACTACT
GAATCAAAGACTCCTGGAGCAAAGCAAACCAAGACAAAGAAAGAAATGGC
TCCAAAGACTTTAAGCACATCTCACACTAGGATTGGTTATAAGCAAGTGA
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032919XLOC_032919Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052003-exon-scaffold_208-1575043694:551649..551778TCONS_00052003-exon-scaffold_208-1575043694:551649..551778Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1575043694:551142..551241TCONS_00052003-exon-scaffold_208-1575043694:551142..551241Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1575043694:550532..550878TCONS_00052003-exon-scaffold_208-1575043694:550532..550878Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1575043694:549816..549929TCONS_00052003-exon-scaffold_208-1575043694:549816..549929Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1575043694:549451..549600TCONS_00052003-exon-scaffold_208-1575043694:549451..549600Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1575043694:549000..549230TCONS_00052003-exon-scaffold_208-1575043694:549000..549230Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1575043694:548731..548807TCONS_00052003-exon-scaffold_208-1575043694:548731..548807Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1575043694:548188..548365TCONS_00052003-exon-scaffold_208-1575043694:548188..548365Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1575043694:547767..547950TCONS_00052003-exon-scaffold_208-1575043694:547767..547950Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1575043694:547369..547559TCONS_00052003-exon-scaffold_208-1575043694:547369..547559Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1575043694:546783..546896TCONS_00052003-exon-scaffold_208-1575043694:546783..546896Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1510915933:551649..551778TCONS_00052003-exon-scaffold_208-1510915933:551649..551778Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1510915933:551142..551241TCONS_00052003-exon-scaffold_208-1510915933:551142..551241Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1510915933:550532..550878TCONS_00052003-exon-scaffold_208-1510915933:550532..550878Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1510915933:549816..549929TCONS_00052003-exon-scaffold_208-1510915933:549816..549929Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1510915933:549451..549600TCONS_00052003-exon-scaffold_208-1510915933:549451..549600Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1510915933:549000..549230TCONS_00052003-exon-scaffold_208-1510915933:549000..549230Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1510915933:548731..548807TCONS_00052003-exon-scaffold_208-1510915933:548731..548807Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1510915933:548188..548365TCONS_00052003-exon-scaffold_208-1510915933:548188..548365Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1510915933:547767..547950TCONS_00052003-exon-scaffold_208-1510915933:547767..547950Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1510915933:547369..547559TCONS_00052003-exon-scaffold_208-1510915933:547369..547559Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1510915933:546783..546896TCONS_00052003-exon-scaffold_208-1510915933:546783..546896Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1491911889:551649..551778TCONS_00052003-exon-scaffold_208-1491911889:551649..551778Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1491911889:551142..551241TCONS_00052003-exon-scaffold_208-1491911889:551142..551241Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1491911889:550532..550878TCONS_00052003-exon-scaffold_208-1491911889:550532..550878Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1491911889:549816..549929TCONS_00052003-exon-scaffold_208-1491911889:549816..549929Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1491911889:549451..549600TCONS_00052003-exon-scaffold_208-1491911889:549451..549600Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1491911889:549000..549230TCONS_00052003-exon-scaffold_208-1491911889:549000..549230Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1491911889:548731..548807TCONS_00052003-exon-scaffold_208-1491911889:548731..548807Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1491911889:548188..548365TCONS_00052003-exon-scaffold_208-1491911889:548188..548365Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1491911889:547767..547950TCONS_00052003-exon-scaffold_208-1491911889:547767..547950Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1491911889:547369..547559TCONS_00052003-exon-scaffold_208-1491911889:547369..547559Clytia hemisphaericaexon
TCONS_00052003-exon-scaffold_208-1491911889:546783..546896TCONS_00052003-exon-scaffold_208-1491911889:546783..546896Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052003-proteinTCONS_00052003-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_208supercontigscaffold_208:546783..551778 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.06095	0.749891	0.429942	0.345314	1.20414	0.686769	1.69001	0.869408	0.70379	0.658939	1.14141	0.604158	0.959898	0.942109	0.622354	0.780183	1.13083	0.773272	1.21935	1.18307	1.0644	1.03316	0.613477	0.737724	0.634115	0.780551	1.27135	0.635114	1.17856	0.791929
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052003 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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