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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051968 ID=TCONS_00051968|Name=TCONS_00051968|organism=Clytia hemisphaerica|type=transcript|length=1415bpRun BLAST on NCBI transcript from alignment at scaffold_207:49319..95284- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00051968 ID=TCONS_00051968|Name=TCONS_00051968|organism=Clytia hemisphaerica|type=transcript|length=45966bp|location=Sequence derived from alignment at scaffold_207:49319..95284- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00051968 vs. Swiss-Prot (Human)
Match: ZNF45 (Zinc finger protein 45 OS=Homo sapiens GN=ZNF45 PE=1 SV=2) HSP 1 Score: 290.812 bits (743), Expect = 1.230e-89 Identity = 140/259 (54.05%), Postives = 172/259 (66.41%), Query Frame = 1
Query: 430 FFIDTAKEPHKCNFCGAEFSESSHLKDHFKTHTDKKPYKCNVCEKEFFCLSSLKIHHRIHTGERPYKCNICGKDYRRLNHLTIHHRIHTGERPFKCDVCKMDFRYASHLKGHFRIHTGEKPFMCDVCGKKFAITGHLKEHLLTHSEEKPYKCDVCGKGFKKSRDVKRHFLIHSGEKPYRCEICEKRFTASCNLKVHMRIHTGEKPYKCETCGKKFTESGNLKVHLRTHTGEKPYKCNVCGLSFKQAHCLIRHRGIHNGE 1206
+ T ++P+KC CG FS+ S+L+ H K HT KKPYKC C K F S L+ H RIHTGE+PYKCN CGK + +HL IH RIHTGE+P+KC+ C F SHL+ H HTGEKP+ C+ CGK F +L +H H+ EKPY+CD CGKGF +S D HF +H+GEKPY+CE C K F+ + NL H R HTGEKPYKC TCGK F+ S +L VH R HTGEKPYKC CG +F Q L H+ +H GE
Sbjct: 267 LIVHTGEKPYKCEECGVGFSQRSYLQVHLKVHTGKKPYKCEECGKSFSWRSRLQAHERIHTGEKPYKCNACGKSFSYSSHLNIHCRIHTGEKPYKCEECGKGFSVGSHLQAHQISHTGEKPYKCEECGKGFCRASNLLDHQRGHTGEKPYQCDACGKGFSRSSDFNIHFRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCGTCGKGFSRSSDLNVHCRIHTGEKPYKCERCGKAFSQFSSLQVHQRVHTGE 525 HSP 2 Score: 274.633 bits (701), Expect = 1.279e-83 Identity = 134/260 (51.54%), Postives = 169/260 (65.00%), Query Frame = 1
Query: 427 HFFIDTAKEPHKCNFCGAEFSESSHLKDHFKTHTDKKPYKCNVCEKEFFCLSSLKIHHRIHTGERPYKCNICGKDYRRLNHLTIHHRIHTGERPFKCDVCKMDFRYASHLKGHFRIHTGEKPFMCDVCGKKFAITGHLKEHLLTHSEEKPYKCDVCGKGFKKSRDVKRHFLIHSGEKPYRCEICEKRFTASCNLKVHMRIHTGEKPYKCETCGKKFTESGNLKVHLRTHTGEKPYKCNVCGLSFKQAHCLIRHRGIHNGE 1206
H I T ++P+KCN CG FS SSHL H + HT +KPYKC C K F S L+ H HTGE+PYKC CGK + R ++L H R HTGE+P++CD C F +S HFR+HTGEKP+ C+ CGK F+ +L H H+ EKPYKC CGKGF +S D+ H IH+GEKPY+CE C K F+ +L+VH R+HTGEKPY+C CGK F+ L+ H R HTGEKPY+C CG F +A + HRG+H GE
Sbjct: 322 HERIHTGEKPYKCNACGKSFSYSSHLNIHCRIHTGEKPYKCEECGKGFSVGSHLQAHQISHTGEKPYKCEECGKGFCRASNLLDHQRGHTGEKPYQCDACGKGFSRSSDFNIHFRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCGTCGKGFSRSSDLNVHCRIHTGEKPYKCERCGKAFSQFSSLQVHQRVHTGEKPYQCAECGKGFSVGSQLQAHQRCHTGEKPYQCEECGKGFCRASNFLAHRGVHTGE 581 HSP 3 Score: 269.626 bits (688), Expect = 1.026e-81 Identity = 136/280 (48.57%), Postives = 176/280 (62.86%), Query Frame = 1
Query: 361 ETQIKCTVCEEKMNFCCISNG-QHFFIDTAKEPHKCNFCGAEFSESSHLKDHFKTHTDKKPYKCNVCEKEFFCLSSLKIHHRIHTGERPYKCNICGKDYRRLNHLTIHHRIHTGERPFKCDVCKMDFRYASHLKGHFRIHTGEKPFMCDVCGKKFAITGHLKEHLLTHSEEKPYKCDVCGKGFKKSRDVKRHFLIHSGEKPYRCEICEKRFTASCNLKVHMRIHTGEKPYKCETCGKKFTESGNLKVHLRTHTGEKPYKCNVCGLSFKQAHCLIRHRGIH 1197
E KC C + FC SN H T ++P++C+ CG FS SS HF+ HT +KPYKC C K F S+L H R HTGE+PYKC CGK + R + L +H RIHTGE+P+KC+ C F S L+ H R+HTGEKP+ C CGK F++ L+ H H+ EKPY+C+ CGKGF ++ + H +H+GEKPYRC++C KRF L+ H R+HTGE+PYKCE CGK F+ S L+ H R HTGEKPYKC CG F + LI H+ +H
Sbjct: 385 EKPYKCEECGK--GFCRASNLLDHQRGHTGEKPYQCDACGKGFSRSSDFNIHFRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCGTCGKGFSRSSDLNVHCRIHTGEKPYKCERCGKAFSQFSSLQVHQRVHTGEKPYQCAECGKGFSVGSQLQAHQRCHTGEKPYQCEECGKGFCRASNFLAHRGVHTGEKPYRCDVCGKRFRQRSYLQAHQRVHTGERPYKCEECGKVFSWSSYLQAHQRVHTGEKPYKCEECGKGFSWSSSLIIHQRVH 662 HSP 4 Score: 265.388 bits (677), Expect = 4.148e-80 Identity = 127/260 (48.85%), Postives = 170/260 (65.38%), Query Frame = 1
Query: 427 HFFIDTAKEPHKCNFCGAEFSESSHLKDHFKTHTDKKPYKCNVCEKEFFCLSSLKIHHRIHTGERPYKCNICGKDYRRLNHLTIHHRIHTGERPFKCDVCKMDFRYASHLKGHFRIHTGEKPFMCDVCGKKFAITGHLKEHLLTHSEEKPYKCDVCGKGFKKSRDVKRHFLIHSGEKPYRCEICEKRFTASCNLKVHMRIHTGEKPYKCETCGKKFTESGNLKVHLRTHTGEKPYKCNVCGLSFKQAHCLIRHRGIHNGE 1206
H + T + P+K CG +SSH + HT +KPYKC C F S L++H ++HTG++PYKC CGK + + L H RIHTGE+P+KC+ C F Y+SHL H RIHTGEKP+ C+ CGK F++ HL+ H ++H+ EKPYKC+ CGKGF ++ ++ H H+GEKPY+C+ C K F+ S + +H R+HTGEKPYKCE CGK F+++ NL H R HTGEKPYKC CG F ++ L H IH GE
Sbjct: 238 HQRVPTGENPYKYEECGRNVGKSSHCQAPLIVHTGEKPYKCEECGVGFSQRSYLQVHLKVHTGKKPYKCEECGKSFSWRSRLQAHERIHTGEKPYKCNACGKSFSYSSHLNIHCRIHTGEKPYKCEECGKGFSVGSHLQAHQISHTGEKPYKCEECGKGFCRASNLLDHQRGHTGEKPYQCDACGKGFSRSSDFNIHFRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCGTCGKGFSRSSDLNVHCRIHTGE 497 HSP 5 Score: 261.151 bits (666), Expect = 1.533e-78 Identity = 132/286 (46.15%), Postives = 174/286 (60.84%), Query Frame = 1
Query: 349 VESRETQIKCTVCEEKMNFCCISNGQHFFIDTAKEPHKCNFCGAEFSESSHLKDHFKTHTDKKPYKCNVCEKEFFCLSSLKIHHRIHTGERPYKCNICGKDYRRLNHLTIHHRIHTGERPFKCDVCKMDFRYASHLKGHFRIHTGEKPFMCDVCGKKFAITGHLKEHLLTHSEEKPYKCDVCGKGFKKSRDVKRHFLIHSGEKPYRCEICEKRFTASCNLKVHMRIHTGEKPYKCETCGKKFTESGNLKVHLRTHTGEKPYKCNVCGLSFKQAHCLIRHRGIHNGE 1206
+ + E KC C + ++ N H I T ++P+KC CG FS SHL+ H +HT +KPYKC C K F S+L H R HTGE+PY+C+ CGK + R + IH R+HTGE+P+KC+ C F AS+L H R HTGEKP+ C CGK F+ + L H H+ EKPYKC+ CGK F + ++ H +H+GEKPY+C C K F+ L+ H R HTGEKPY+CE CGK F + N H HTGEKPY+C+VCG F+Q L H+ +H GE
Sbjct: 325 IHTGEKPYKCNACGKSFSYSSHLN-IHCRIHTGEKPYKCEECGKGFSVGSHLQAHQISHTGEKPYKCEECGKGFCRASNLLDHQRGHTGEKPYQCDACGKGFSRSSDFNIHFRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCGTCGKGFSRSSDLNVHCRIHTGEKPYKCERCGKAFSQFSSLQVHQRVHTGEKPYQCAECGKGFSVGSQLQAHQRCHTGEKPYQCEECGKGFCRASNFLAHRGVHTGEKPYRCDVCGKRFRQRSYLQAHQRVHTGE 609 HSP 6 Score: 240.35 bits (612), Expect = 9.377e-71 Identity = 112/233 (48.07%), Postives = 153/233 (65.67%), Query Frame = 1
Query: 427 HFFIDTAKEPHKCNFCGAEFSESSHLKDHFKTHTDKKPYKCNVCEKEFFCLSSLKIHHRIHTGERPYKCNICGKDYRRLNHLTIHHRIHTGERPFKCDVCKMDFRYASHLKGHFRIHTGEKPFMCDVCGKKFAITGHLKEHLLTHSEEKPYKCDVCGKGFKKSRDVKRHFLIHSGEKPYRCEICEKRFTASCNLKVHMRIHTGEKPYKCETCGKKFTESGNLKVHLRTHTGEK 1125
HF + T ++P+KC CG FS++S+L H + HT +KPYKC C K F S L +H RIHTGE+PYKC CGK + + + L +H R+HTGE+P++C C F S L+ H R HTGEKP+ C+ CGK F + H H+ EKPY+CDVCGK F++ ++ H +H+GE+PY+CE C K F+ S L+ H R+HTGEKPYKCE CGK F+ S +L +H R H ++
Sbjct: 434 HFRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCGTCGKGFSRSSDLNVHCRIHTGEKPYKCERCGKAFSQFSSLQVHQRVHTGEKPYQCAECGKGFSVGSQLQAHQRCHTGEKPYQCEECGKGFCRASNFLAHRGVHTGEKPYRCDVCGKRFRQRSYLQAHQRVHTGERPYKCEECGKVFSWSSYLQAHQRVHTGEKPYKCEECGKGFSWSSSLIIHQRVHADDE 666 HSP 7 Score: 235.343 bits (599), Expect = 6.388e-69 Identity = 124/313 (39.62%), Postives = 169/313 (53.99%), Query Frame = 1
Query: 436 IDTAKEPHKCNFCGAEFSESSHLKDHFKTHTDKKPYKCNVCEKEFFCLSSL----KIHHR----------------------------------------------------IHTGERPYKCNICGKDYRRLNHLTIHHRIHTGERPFKCDVCKMDFRYASHLKGHFRIHTGEKPFMCDVCGKKFAITGHLKEHLLTHSEEKPYKCDVCGKGFKKSRDVKRHFLIHSGEKPYRCEICEKRFTASCNLKVHMRIHTGEKPYKCETCGKKFTESGNLKVHLRTHTGEKPYKCNVCGLSFKQAHCLIRHRGIHNGE 1206
+ T ++P+K C FS SSHL+ + + H +KPYKC C+ F SSL ++H R +HTGE+PYKC CG + + ++L +H ++HTG++P+KC+ C F + S L+ H RIHTGEKP+ C+ CGK F+ + HL H H+ EKPYKC+ CGKGF ++ H + H+GEKPY+CE C K F + NL H R HTGEKPY+C+ CGK F+ S + +H R HTGEKPYKC CG F QA L+ H+ H GE
Sbjct: 157 VHTGEKPYKGEHCVKSFSWSSHLQINQRAHAGEKPYKCEKCDNAFRRFSSLQAHQRVHSRAKSYTNDASYRSFSQRSHLPHHQRVPTGENPYKYEECGRNVGKSSHCQAPLIVHTGEKPYKCEECGVGFSQRSYLQVHLKVHTGKKPYKCEECGKSFSWRSRLQAHERIHTGEKPYKCNACGKSFSYSSHLNIHCRIHTGEKPYKCEECGKGFSVGSHLQAHQISHTGEKPYKCEECGKGFCRASNLLDHQRGHTGEKPYQCDACGKGFSRSSDFNIHFRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGE 469 HSP 8 Score: 211.846 bits (538), Expect = 2.063e-60 Identity = 107/240 (44.58%), Postives = 143/240 (59.58%), Query Frame = 1
Query: 487 SESSHLKDHFKTHTDKKPYKCNVCEKEFFCLSSLKIHHRIHTGERPYKCNICGKDYRRLNHLTIHHRIHTGERPFKCDVCKMDFRYASHLKGHFRIHTGEKPFMCDVCGKKFAITGHLKEHLLTHSEEKPYKCDVCGKGFKKSRDVKRHFLIHSGEKPYRCEICEKRFTASCNLKVHMRIHTGEKPYKCETCGKKFTESGNLKVHLRTHTGEKPYKCNVCGLSFKQAHCLIRHRGIHNGE 1206
++SSHL+ H + HT +KPYK C K F S L+I+ R H GE+PYKC C +RR + L H R+H+ + + D F SHL H R+ TGE P+ + CG+ + H + L+ H+ EKPYKC+ CG GF + ++ H +H+G+KPY+CE C K F+ L+ H RIHTGEKPYKC CGK F+ S +L +H R HTGEKPYKC CG F L H+ H GE
Sbjct: 147 NQSSHLQVH-RVHTGEKPYKGEHCVKSFSWSSHLQINQRAHAGEKPYKCEKCDNAFRRFSSLQAHQRVHSRAKSYTNDASYRSFSQRSHLPHHQRVPTGENPYKYEECGRNVGKSSHCQAPLIVHTGEKPYKCEECGVGFSQRSYLQVHLKVHTGKKPYKCEECGKSFSWRSRLQAHERIHTGEKPYKCNACGKSFSYSSHLNIHCRIHTGEKPYKCEECGKGFSVGSHLQAHQISHTGE 385 The following BLAST results are available for this feature:
BLAST of TCONS_00051968 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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