TCONS_00051901 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051901
Unique NameTCONS_00051901
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1774

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051901 ID=TCONS_00051901|Name=TCONS_00051901|organism=Clytia hemisphaerica|type=transcript|length=1774bp
CTAATAAACAGTATattgaaaaacattattttttgcaACTTCCTACAGGA
CCTCCTGTGTTTCGAATGTTTAGAAGGAAATTATGTCCATTTAATTACTT
CTTCTCGGTTACTATTGCAAACTTTGCCAGTATTTAAAGGGCAGCTCagc
atcaaaatttcaaagcattGTTTACATTCTCAAGTATCTGATACAAGGAC
AACAAGATGTGGACAGTTCGTTTAGCTTTACTATTTTGTGCCCTTCACCT
TTCATCTGCAGGATACAAGAACAAAGGTGAGTTGATCGCCAGAAATTACC
TAGTTGATAGTATTGAAACATTATCACCAACATGGTATGTGTCTTTCCAA
GTTCAACCAATCCATCGAGTTGCACAATGGAGTAATGTCATTCATCTTAC
TGCATCTGGAAAAGACATTACAAGCTACGGTGATCGAATTCCAGCCGTCT
TTTTCAACCGACATAGTACATCGCTCCATATCTGTTCAGCAGTCAATAAC
AACCGAAACTATTGTTTCAACACTCAACCTCTACCACTCCACCGCTGGTC
TACAGTAGAAATCACACAATTCCAACAAGGACATACTgctgttttttata
aaatcaaaatcaacggACAGGTCGTTCATAAAGTTCAAAACAAGAATGTA
CGATTTTTCCCCAATGTTCAAGTCTATAGAGGAAATCCTTTTTATACCGC
AGCACCAGCTAGAATCAGAGCATTTACCTACAAAAACCTTCCTTACGAAC
ACACTCTTACTCGAAATACGTTgatcaagaaattaaaagcttACTACAGT
GACTTCGAGGTCTCATTTGATATCAGACCATTCGGTAAAGTACACTCTTG
GTCAAGCATTCTTCACGTGACCGAATGGGATGATAACTCAGCTTACGGCA
ACCGAATCCCTGCTGTCTTTTTTCGACCTGAATCAAATAAATTGACAATC
TGCTCAGCTATCAATGGTAACAAGAATTACTGTTGGAGCTCCAAAACTGA
TCTACCAGCCGACAAATTCTCTCATGTTATCATCAAACAAAAGTTGATTA
AGAATCAATTCATGTACACCATTTATGTCAACGcaaaacaggtttttaaa
attgtcAATACCAGACCAATCACTTTGTACAGAGCCAAAGTTTTCCTCTC
AAGTCCATGGCATCCAGCAGCTAAAGCTTTCGTCCAAAGAGTTCGCGTTA
CAACAACAACTAGAGCTGGCTTCAAACTTATCAAAGGAAAAATGACGAGT
GTCATCCCTAGAGTTGATCGTGAATGGTACCTCTCCTTTGACATCAAGCC
TGAAAACAAACTCATCTACGGTTGGGGAAGTATCATCCATTTGACGACCG
GAGGAAACCACGGAAAGGTTGGTTACCGTATCCCGGGAATCTGGTTTAAC
CCGAACTCCCGACGTCTTCATATTTGTTATGCTATCAATCACTATCATAA
TAGATGTATTAATACGCATGCTCTTGCTGCCAACAAATGGACCAGCATCC
AGGTTGTCCAAGTCTTCGATAGTGGTCTATATCAattcaaatatatcatt
ttgaTCAATAATGTTGTCAAGGCAACCTTGATCAACTCGAGACCTCGATC
ATTCCAGAACGTACAAGTATGGACAGCGGACCCATGGCACCATGCAGCTA
ACGCCCTTCTCAGAAATCTCGTTTTTCAGAACATCCGTGCCTACGACTAA
ATTTTAaagaatctcgagaaaatctggTGAAATGGCCAAATCATCAAGAA
AATTgacaatttaaattttgaaat
Run BLAST on NCBI

protein sequence of TCONS_00051901-protein

>TCONS_00051901-protein ID=TCONS_00051901-protein|Name=TCONS_00051901-protein|organism=Clytia hemisphaerica|type=polypeptide|length=497bp
MWTVRLALLFCALHLSSAGYKNKGELIARNYLVDSIETLSPTWYVSFQVQ
PIHRVAQWSNVIHLTASGKDITSYGDRIPAVFFNRHSTSLHICSAVNNNR
NYCFNTQPLPLHRWSTVEITQFQQGHTAVFYKIKINGQVVHKVQNKNVRF
FPNVQVYRGNPFYTAAPARIRAFTYKNLPYEHTLTRNTLIKKLKAYYSDF
EVSFDIRPFGKVHSWSSILHVTEWDDNSAYGNRIPAVFFRPESNKLTICS
AINGNKNYCWSSKTDLPADKFSHVIIKQKLIKNQFMYTIYVNAKQVFKIV
NTRPITLYRAKVFLSSPWHPAAKAFVQRVRVTTTTRAGFKLIKGKMTSVI
PRVDREWYLSFDIKPENKLIYGWGSIIHLTTGGNHGKVGYRIPGIWFNPN
SRRLHICYAINHYHNRCINTHALAANKWTSIQVVQVFDSGLYQFKYIILI
NNVVKATLINSRPRSFQNVQVWTADPWHHAANALLRNLVFQNIRAYD
Run BLAST on NCBI

transcript from alignment at scaffold_206:163224..167697+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051901 ID=TCONS_00051901|Name=TCONS_00051901|organism=Clytia hemisphaerica|type=transcript|length=4474bp|location=Sequence derived from alignment at scaffold_206:163224..167697+ (Clytia hemisphaerica)
CTAATAAACAGTATattgaaaaacattattttttgcaACTTCCTACAGGA CCTCCTGTGTTTCGAATGTTTAGAAGGAAATTATGTCCATTTAATTACTT CTTCTCGGTTACTATTGCAAACTTTGCCAGTATTTAAAGGGCAGCTCagc atcaaaatttcaaagcattGTTTACATTCTCAAGTATCTGATACAAGGAC AACAAGATGTGGACAGTTCGTTTAGCTTTACTATTTTGTGCCCTTCACCT TTCATCTGCAGGATACAAGAACAAAGGTATACATACGTTTTTGTTAAGAA TTTACCACCAAAAATTTACATCGGTCTCGCAGAAACAACCTTCAAAAAGC GATATGCGAACCACAAGAAATCGTTCAACCAGGCCAAATACGAAAATGAA ACCGATCTCTCCAACGAATTTTGGCGGCATTCTCGTAACCAGACCAACCC TAAAGTTACATTTTTGTTgtgttcattttctttttgatgaCGATTCACTA ATTTCTATACTCTCTATATCTATAATCTATCTCTGTTTTTATACGAGTCA GCACATCACTTGAAAATTTCCGATATCACTGTTGCCTCGGCTATTTTTTT CCCGCCTTCAAAAAAGAAGCTGTAAATTTCAGAACTTGTGACTATTTGGA TGTCCATTCCGAAATTTCGACCAATTGTTTTCGCTAAATACTGATTATAC GGACTAGATAGTTTTCTCCCAGGGATGGGGGCACTGACTTTGACGGCCGA TGGCGTTTGAAAAGTGgaacctgtcagatatgaatgtttgggaaatttgg gaccctgtcagaaggaaaatcgaaaaaatttcccattttcaccattaaaa gaagcaaaaatgACGAAATGTAGACAAAAGATTGAAAGGTTTcctaattt ccaccctgaaattgtccaaaataaccaaaagtcgaccctgtcagGTACAA ATGTTAAAGATTAGTAAGTTtgcgaccctgtcagatatcttcagagccta aaaaagggaacctgaccagcggcacatccccgtTCCTAATTTCGACTGAG TGCCTCCCCAAGTGGGTTTTCCATCTCCGACATTTGAAATAACTTTTGCA ATCTTACCGTGAATTCCGCCAATCCAGACGAAAAAAGGACTGATTCCACT CTCCCGCCAAGTAGTTTCTTCTAGGGAACTTTCAAACCTAATCCTTTTTT TTATCANTCCCGCCAAGTGGTTTCTTCTAGGGAACTTTCAAACCTAATCC TTTTTTTTATCATCCCAAATATTAATAGTAATTATTATTTAATTCTCATT TTAGGTGAGTTGATCGCCAGAAATTACCTAGTTGATAGTATTGAAACATT ATCACCAACATGGTATGTGTCTTTCCAAGTTCAACCAATCCATCGAGTTG CACAATGGAGTAATGTCATTCATCTTACTGCATCTGGAAAAGACATTACA AGCTACGGTGATCGAATTCCAGCCGTCTTTTTCAACCGACATAGTACATC GCTCCATATCTGTTCAGCAGTCAATAACAACCGAAACTATTGTTTCAACA CTCAACCTCTACCACTCCACCGCTGGTCTACAGTAGAAATCACACAATTC CAACAAGGACATACTgctgttttttataaaatcaaaatcaacggACAGGT CGTTCATAAAGTTCAAAACAAGAATGTACGATTTTTCCCCAATGTTCAAG TCTATAGAGGAAATCCTTTTTATACCGCAGCACCAGCTAGAATCAGAGCA TTTACCTACAAAAACCTTCCTTACGGTACGTAAGAGCTTCCTTAAAATTG CGTCTCCTTGCCAAATACAGCCAGCATTCATTCTTTCGAAATAGTCCAAG tgctcgggtgaaacaaggcatgtcccaaatatattttgcgtgacgcacac cgcttcccattattcattaactttcatatatagctcaaaagaatcgtatC NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagt gctgggtcaaaaatttacatcaagccaatctcaagatatcggccaaaaac tgattttgacgttataaaatacatcgaaaaaacacgtcaaaaagacaatt taagtgacgtcattattgaaaaaaggcgataattctgattaacttactac aatcaaagcaaaattttgactggagatgtaaagtaacgattctaaaatat ttcatgaaaaaaattttgaaaattcacgatgacgtcagcatttttgacgt attttgatttttcccgacagcaaatgacgtcattcaaattttctgaaaat ttttgaacaaatatttcagaatcattaatttacagctccagtcaaaattt ggtgttgattgcattaataaaattgaagttatcgctgtttttcaataatg acggcatttgaatcttacttatgacgtgttttttcgatgtattttataac gtcaaaatcaatttttgaccgatatcttgagattagcttaatgcaaattt ttgacccagcacttttcaaAATCCGCTCGttgatatgattcttttgagct atatatgaacgttaaggaataattggaagcggtgcgcgtcacgcaaaata tatttgggacatgccttgtttcaccCGAGTGTATTTATTTTCTGTGGCGG GATCAATTAGCatcgaaaaattgattaaaattgatTATGCATGCGGAAAA ACTTTTGTGAGATACTGAAATGTTTACATGCTGAAAATATTCATTCTATT GCTTTATATAACTCATCAAGCTTTTGACTTAACCTTTCCGTTGTGCTTTA AATCATGAAGGTAAAACAACCTTACCTTCATGTTTAAATGTTTATTGTAT ACGTCTCTTTTTAGAACACACTCTTACTCGAAATACGTTgatcaagaaat taaaagcttACTACAGTGACTTCGAGGTCTCATTTGATATCAGACCATTC GGTAAAGTACACTCTTGGTCAAGCATTCTTCACGTGACCGAATGGGATGA TAACTCAGCTTACGGCAACCGAATCCCTGCTGTCTTTTTTCGACCTGAAT CAAATAAATTGACAATCTGCTCAGCTATCAATGGTAACAAGAATTACTGT TGGAGCTCCAAAACTGATCTACCAGCCGACAAATTCTCTCATGTTATCAT CAAACAAAAGTTGATTAAGAATCAATTCATGTACACCATTTATGTCAACG caaaacaggtttttaaaattgtcAATACCAGACCAATCACTTTGTACAGA GCCAAAGTTTTCCTCTCAAGTCCATGGCATCCAGCAGCTAAAGCTTTCGT CCAAAGAGTTCGCGTTACAACAACAACTAGAGGTACACCTATTTTTTCAT TACCTATTATGACCACTCCCTCATATCCATAGCTCCAagttcaatacacc tttttgaccgtagccaCAAAATGCNATGACCACTCCCTCATATCCATAGC TCCAagttcaatacacctttttgaccgtagccaCAAAATGCCGCGCAGGA ATTTTTTcatccgttttaccaccctaaaaccgtcgcAATCTTTTTTCACG cttaaagacaatagaaaaaagtgtaaaaaaggattggatcgagtttaggg tggtaaaataaGTAATAAAGTGGCACACGCCTGACCGACTGATGAATAGT TGCTAGATTTAGTGACGACCATCTAGGAATCGTATTTATTTCGAAAATAA TATGCACCAAATCTTTTCTAGACTCTCTGCTCATAATCGAGCGAAAAGGC TTCCATTGGAAGGGATAGAGTTCTGCGATTCAAACTTACACACATCCCAT CTTTAATAATTTTAGCTGGCTTCAAACTTATCAAAGGAAAAATGACGAGT GTCATCCCTAGAGTTGATCGTGAATGGTACCTCTCCTTTGACATCAAGCC TGAAAACAAACTCATCTACGGTTGGGGAAGTATCATCCATTTGACGACCG GAGGAAACCACGGAAAGGTTGGTTACCGTATCCCGGGAATCTGGTTTAAC CCGAACTCCCGACGTCTTCATATTTGTTATGCTATCAATCACTATCATAA TAGATGTATTAATACGCATGCTCTTGCTGCCAACAAATGGACCAGCATCC AGGTTGTCCAAGTCTTCGATAGTGGTCTATATCAattcaaatatatcatt ttgaTCAATAATGTTGTCAAGGCAACCTTGATCAACTCGAGACCTCGATC ATTCCAGAACGTACAAGTATGGACAGCGGACCCATGGCACCATGCAGCTA ACGCCCTTCTCAGAAATCTCGTTTTTCAGAACATCCGTGCCTACGACTAA ATTTTAaagaatctcgagaaaatctggTGAAATGGCCAAATCATCAAGAA AATTgacaatttaaattttgaaat

Coding sequence (CDS) from alignment at scaffold_206:163224..167697+

>TCONS_00051901 ID=TCONS_00051901|Name=TCONS_00051901|organism=Clytia hemisphaerica|type=CDS|length=5976bp|location=Sequence derived from alignment at scaffold_206:163224..167697+ (Clytia hemisphaerica)
ATGTGGACAGTTCGTTTAGCTTTACTATTTTGTGCCCTTCACCTTTCATC
TGCAGGATACAAGAACAAAGGTGAGTTGATCGCCAGAAATTACCTAGTTG
ATAGTATTGAAACATTATCACCAACATGGTATGTGTCTTTCCAAGTTCAA
CCAATCCATCGAGTTGCACAATGGAGTAATGTCATTCATCTTACTGCATC
TGGAAAAGACATTACAAGCTACGGTGATCGAATTCCAGCCGTCTTTTTCA
ACCGACATAGTACATCGCTCCATATCTGTTCAGCAGTCAATAACAACCGA
AACTATTGTTTCAACACTCAACCTCTACCACTCCACCGCTGGTCTACAGT
AGAAATCACACAATTCCAACAAGGACATACTgctgttttttataaaatca
aaatcaacggACAGGTCGTTCATAAAGTTCAAAACAAGAATGTACGATTT
TTCCCCAATGTTCAAGTCTATAGAGGAAATCCTTTTTATACCGCAGCACC
AGCTAGAATCAGAGCATTTACCTACAAAAACCTTCCTTACGAACACACTC
TTACTCGAAATACGTTgatcaagaaattaaaagcttACTACAGTGACTTC
GAGGTCTCATTTGATATCAGACCATTCGGTAAAGTACACTCTTGGTCAAG
CATTCTTCACGTGACCGAATGGGATGATAACTCAGCTTACGGCAACCGAA
TCCCTGCTGTCTTTTTTCGACCTGAATCAAATAAATTGACAATCTGCTCA
GCTATCAATGGTAACAAGAATTACTGTTGGAGCTCCAAAACTGATCTACC
AGCCGACAAATTCTCTCATGTTATCATCAAACAAAAGTTGATTAAGAATC
AATTCATGTACACCATTTATGTCAACGcaaaacaggtttttaaaattgtc
AATACCAGACCAATCACTTTGTACAGAGCCAAAGTTTTCCTCTCAAGTCC
ATGGCATCCAGCAGCTAAAGCTTTCGTCCAAAGAGTTCGCGTTACAACAA
CAACTAGAGCTGGCTTCAAACTTATCAAAGGAAAAATGACGAGTGTCATC
CCTAGAGTTGATCGTGAATGGTACCTCTCCTTTGACATCAAGCCTGAAAA
CAAACTCATCTACGGTTGGGGAAGTATCATCCATTTGACGACCGGAGGAA
ACCACGGAAAGGTTGGTTACCGTATCCCGGGAATCTGGTTTAACCCGAAC
TCCCGACGTCTTCATATTTGTTATGCTATCAATCACTATCATAATAGATG
TATTAATACGCATGCTCTTGCTGCCAACAAATGGACCAGCATCCAGGTTG
TCCAAGTCTTCGATAGTGGTCTATATCAattcaaatatatcattttgaTC
AATAATGTTGTCAAGGCAACCTTGATCAACTCGAGACCTCGATCATTCCA
GAACGTACAAGTATGGACAGCGGACCCATGGCACCATGCAGCTAACGCCC
TTCTCAGAAATCTCGTTTTTCAGAACATCCGTGCCTACGACTAAATGTGG
ACAGTTCGTTTAGCTTTACTATTTTGTGCCCTTCACCTTTCATCTGCAGG
ATACAAGAACAAAGGTGAGTTGATCGCCAGAAATTACCTAGTTGATAGTA
TTGAAACATTATCACCAACATGGTATGTGTCTTTCCAAGTTCAACCAATC
CATCGAGTTGCACAATGGAGTAATGTCATTCATCTTACTGCATCTGGAAA
AGACATTACAAGCTACGGTGATCGAATTCCAGCCGTCTTTTTCAACCGAC
ATAGTACATCGCTCCATATCTGTTCAGCAGTCAATAACAACCGAAACTAT
TGTTTCAACACTCAACCTCTACCACTCCACCGCTGGTCTACAGTAGAAAT
CACACAATTCCAACAAGGACATACTgctgttttttataaaatcaaaatca
acggACAGGTCGTTCATAAAGTTCAAAACAAGAATGTACGATTTTTCCCC
AATGTTCAAGTCTATAGAGGAAATCCTTTTTATACCGCAGCACCAGCTAG
AATCAGAGCATTTACCTACAAAAACCTTCCTTACGAACACACTCTTACTC
GAAATACGTTgatcaagaaattaaaagcttACTACAGTGACTTCGAGGTC
TCATTTGATATCAGACCATTCGGTAAAGTACACTCTTGGTCAAGCATTCT
TCACGTGACCGAATGGGATGATAACTCAGCTTACGGCAACCGAATCCCTG
CTGTCTTTTTTCGACCTGAATCAAATAAATTGACAATCTGCTCAGCTATC
AATGGTAACAAGAATTACTGTTGGAGCTCCAAAACTGATCTACCAGCCGA
CAAATTCTCTCATGTTATCATCAAACAAAAGTTGATTAAGAATCAATTCA
TGTACACCATTTATGTCAACGcaaaacaggtttttaaaattgtcAATACC
AGACCAATCACTTTGTACAGAGCCAAAGTTTTCCTCTCAAGTCCATGGCA
TCCAGCAGCTAAAGCTTTCGTCCAAAGAGTTCGCGTTACAACAACAACTA
GAGCTGGCTTCAAACTTATCAAAGGAAAAATGACGAGTGTCATCCCTAGA
GTTGATCGTGAATGGTACCTCTCCTTTGACATCAAGCCTGAAAACAAACT
CATCTACGGTTGGGGAAGTATCATCCATTTGACGACCGGAGGAAACCACG
GAAAGGTTGGTTACCGTATCCCGGGAATCTGGTTTAACCCGAACTCCCGA
CGTCTTCATATTTGTTATGCTATCAATCACTATCATAATAGATGTATTAA
TACGCATGCTCTTGCTGCCAACAAATGGACCAGCATCCAGGTTGTCCAAG
TCTTCGATAGTGGTCTATATCAattcaaatatatcattttgaTCAATAAT
GTTGTCAAGGCAACCTTGATCAACTCGAGACCTCGATCATTCCAGAACGT
ACAAGTATGGACAGCGGACCCATGGCACCATGCAGCTAACGCCCTTCTCA
GAAATCTCGTTTTTCAGAACATCCGTGCCTACGACTAAATGTGGACAGTT
CGTTTAGCTTTACTATTTTGTGCCCTTCACCTTTCATCTGCAGGATACAA
GAACAAAGGTGAGTTGATCGCCAGAAATTACCTAGTTGATAGTATTGAAA
CATTATCACCAACATGGTATGTGTCTTTCCAAGTTCAACCAATCCATCGA
GTTGCACAATGGAGTAATGTCATTCATCTTACTGCATCTGGAAAAGACAT
TACAAGCTACGGTGATCGAATTCCAGCCGTCTTTTTCAACCGACATAGTA
CATCGCTCCATATCTGTTCAGCAGTCAATAACAACCGAAACTATTGTTTC
AACACTCAACCTCTACCACTCCACCGCTGGTCTACAGTAGAAATCACACA
ATTCCAACAAGGACATACTgctgttttttataaaatcaaaatcaacggAC
AGGTCGTTCATAAAGTTCAAAACAAGAATGTACGATTTTTCCCCAATGTT
CAAGTCTATAGAGGAAATCCTTTTTATACCGCAGCACCAGCTAGAATCAG
AGCATTTACCTACAAAAACCTTCCTTACGAACACACTCTTACTCGAAATA
CGTTgatcaagaaattaaaagcttACTACAGTGACTTCGAGGTCTCATTT
GATATCAGACCATTCGGTAAAGTACACTCTTGGTCAAGCATTCTTCACGT
GACCGAATGGGATGATAACTCAGCTTACGGCAACCGAATCCCTGCTGTCT
TTTTTCGACCTGAATCAAATAAATTGACAATCTGCTCAGCTATCAATGGT
AACAAGAATTACTGTTGGAGCTCCAAAACTGATCTACCAGCCGACAAATT
CTCTCATGTTATCATCAAACAAAAGTTGATTAAGAATCAATTCATGTACA
CCATTTATGTCAACGcaaaacaggtttttaaaattgtcAATACCAGACCA
ATCACTTTGTACAGAGCCAAAGTTTTCCTCTCAAGTCCATGGCATCCAGC
AGCTAAAGCTTTCGTCCAAAGAGTTCGCGTTACAACAACAACTAGAGCTG
GCTTCAAACTTATCAAAGGAAAAATGACGAGTGTCATCCCTAGAGTTGAT
CGTGAATGGTACCTCTCCTTTGACATCAAGCCTGAAAACAAACTCATCTA
CGGTTGGGGAAGTATCATCCATTTGACGACCGGAGGAAACCACGGAAAGG
TTGGTTACCGTATCCCGGGAATCTGGTTTAACCCGAACTCCCGACGTCTT
CATATTTGTTATGCTATCAATCACTATCATAATAGATGTATTAATACGCA
TGCTCTTGCTGCCAACAAATGGACCAGCATCCAGGTTGTCCAAGTCTTCG
ATAGTGGTCTATATCAattcaaatatatcattttgaTCAATAATGTTGTC
AAGGCAACCTTGATCAACTCGAGACCTCGATCATTCCAGAACGTACAAGT
ATGGACAGCGGACCCATGGCACCATGCAGCTAACGCCCTTCTCAGAAATC
TCGTTTTTCAGAACATCCGTGCCTACGACTAAATGTGGACAGTTCGTTTA
GCTTTACTATTTTGTGCCCTTCACCTTTCATCTGCAGGATACAAGAACAA
AGGTGAGTTGATCGCCAGAAATTACCTAGTTGATAGTATTGAAACATTAT
CACCAACATGGTATGTGTCTTTCCAAGTTCAACCAATCCATCGAGTTGCA
CAATGGAGTAATGTCATTCATCTTACTGCATCTGGAAAAGACATTACAAG
CTACGGTGATCGAATTCCAGCCGTCTTTTTCAACCGACATAGTACATCGC
TCCATATCTGTTCAGCAGTCAATAACAACCGAAACTATTGTTTCAACACT
CAACCTCTACCACTCCACCGCTGGTCTACAGTAGAAATCACACAATTCCA
ACAAGGACATACTgctgttttttataaaatcaaaatcaacggACAGGTCG
TTCATAAAGTTCAAAACAAGAATGTACGATTTTTCCCCAATGTTCAAGTC
TATAGAGGAAATCCTTTTTATACCGCAGCACCAGCTAGAATCAGAGCATT
TACCTACAAAAACCTTCCTTACGAACACACTCTTACTCGAAATACGTTga
tcaagaaattaaaagcttACTACAGTGACTTCGAGGTCTCATTTGATATC
AGACCATTCGGTAAAGTACACTCTTGGTCAAGCATTCTTCACGTGACCGA
ATGGGATGATAACTCAGCTTACGGCAACCGAATCCCTGCTGTCTTTTTTC
GACCTGAATCAAATAAATTGACAATCTGCTCAGCTATCAATGGTAACAAG
AATTACTGTTGGAGCTCCAAAACTGATCTACCAGCCGACAAATTCTCTCA
TGTTATCATCAAACAAAAGTTGATTAAGAATCAATTCATGTACACCATTT
ATGTCAACGcaaaacaggtttttaaaattgtcAATACCAGACCAATCACT
TTGTACAGAGCCAAAGTTTTCCTCTCAAGTCCATGGCATCCAGCAGCTAA
AGCTTTCGTCCAAAGAGTTCGCGTTACAACAACAACTAGAGCTGGCTTCA
AACTTATCAAAGGAAAAATGACGAGTGTCATCCCTAGAGTTGATCGTGAA
TGGTACCTCTCCTTTGACATCAAGCCTGAAAACAAACTCATCTACGGTTG
GGGAAGTATCATCCATTTGACGACCGGAGGAAACCACGGAAAGGTTGGTT
ACCGTATCCCGGGAATCTGGTTTAACCCGAACTCCCGACGTCTTCATATT
TGTTATGCTATCAATCACTATCATAATAGATGTATTAATACGCATGCTCT
TGCTGCCAACAAATGGACCAGCATCCAGGTTGTCCAAGTCTTCGATAGTG
GTCTATATCAattcaaatatatcattttgaTCAATAATGTTGTCAAGGCA
ACCTTGATCAACTCGAGACCTCGATCATTCCAGAACGTACAAGTATGGAC
AGCGGACCCATGGCACCATGCAGCTAACGCCCTTCTCAGAAATCTCGTTT
TTCAGAACATCCGTGCCTACGACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032851XLOC_032851Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051901-exon-scaffold_206-1491911889:163224..163499TCONS_00051901-exon-scaffold_206-1491911889:163224..163499Clytia hemisphaericaexon
TCONS_00051901-exon-scaffold_206-1510915933:163224..163499TCONS_00051901-exon-scaffold_206-1510915933:163224..163499Clytia hemisphaericaexon
TCONS_00051901-exon-scaffold_206-1575043694:163224..163499TCONS_00051901-exon-scaffold_206-1575043694:163224..163499Clytia hemisphaericaexon
TCONS_00051901-exon-scaffold_206-1491911889:164528..164998TCONS_00051901-exon-scaffold_206-1491911889:164528..164998Clytia hemisphaericaexon
TCONS_00051901-exon-scaffold_206-1510915933:164528..164998TCONS_00051901-exon-scaffold_206-1510915933:164528..164998Clytia hemisphaericaexon
TCONS_00051901-exon-scaffold_206-1575043694:164528..164998TCONS_00051901-exon-scaffold_206-1575043694:164528..164998Clytia hemisphaericaexon
TCONS_00051901-exon-scaffold_206-1491911889:166188..166655TCONS_00051901-exon-scaffold_206-1491911889:166188..166655Clytia hemisphaericaexon
TCONS_00051901-exon-scaffold_206-1510915933:166188..166655TCONS_00051901-exon-scaffold_206-1510915933:166188..166655Clytia hemisphaericaexon
TCONS_00051901-exon-scaffold_206-1575043694:166188..166655TCONS_00051901-exon-scaffold_206-1575043694:166188..166655Clytia hemisphaericaexon
TCONS_00051901-exon-scaffold_206-1491911889:167139..167697TCONS_00051901-exon-scaffold_206-1491911889:167139..167697Clytia hemisphaericaexon
TCONS_00051901-exon-scaffold_206-1510915933:167139..167697TCONS_00051901-exon-scaffold_206-1510915933:167139..167697Clytia hemisphaericaexon
TCONS_00051901-exon-scaffold_206-1575043694:167139..167697TCONS_00051901-exon-scaffold_206-1575043694:167139..167697Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051901-proteinTCONS_00051901-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_206supercontigscaffold_206:163224..167697 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.0256676 0 0 0 0.816066 1.47512 175.714 155.317 21.1508 159.963 0.859375 1.09602 625.668 106.392 0.0170179 0.1221 0.481963 0.126085 0 0 0 0 0 0 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051901 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top