TCONS_00051898 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051898
Unique NameTCONS_00051898
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1892

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051898 ID=TCONS_00051898|Name=TCONS_00051898|organism=Clytia hemisphaerica|type=transcript|length=1892bp
GCTTGAAAAAGAATAAAACTAACAATGTGGACTTTTCACTTGACCCTATT
ATTTAGTGTAACGCAATTCATTTCTGGAGGTTATGTGGACAAAGGTGTTC
TGATCAGTCGAAATTATTTAGTTGACCATCTCCCAACATGGAGCCCGACG
TGGTACGTCTCTTTCCAAGTCCAACCTATCCACAAAATCGCACACTGGAC
AAACGTGGTTCGATTTACTGCCGGCACACAAGATTTCAAACGGGTTGGTG
ATCGTGTTCCGGCTGTCTTCTTTGTACCACATACAACGAAGCTCCATATC
TGCACCACTTTGAATAACCATGTCAACTATTGTTTCAATAGCCACCCGTT
GCCTCTTCACCAATGGGCTTCTGTCGAAATTTCGCAAACTCAATCGGCCG
CCAAATACCTCTACACCATTCGAATCAACGGTCGAACTGTTCATCAAGTT
GAAAACAAAGGAGCTCGCTATTACATGGGTGTCAATGTGTTCAGAGGAGA
CAACTTTTATGGACCAGCACCAGCAAGAATCAGACAATTGACTTACCATA
ATTTACCAAGTGTTTTCAAACTTGTCCGTAACACCATCATCAAAGCATAC
CGTGCCTATTTTACCGAATACGAAGTTTCCTTTGACATTAAACCATTCGG
CAAATTACACAGTTGGACAAGCATTCTTCACGTGACCGAATGGGATGATA
ACTCAGCTTACGGTAACCGAATCCCTGCTGTCTTTTTCCAACCTGAATCA
AATAAATTGACAATCTGCTCAGCTATCAATGGTAACAAAAATCACTGCTG
GAACGACAAAAATGATCTACCGGCCGGCAAATTCTCTCATGTTATCATCA
AACAAAAACTTGTGAAGGAACAATACGTTTATGTCATCTATCTTAACGGA
AACAAAGTTTTCGAGATTGTCAACACTCGACCAATCACATTGTATCGGGC
TAAAGTTTTCCTCTCAAGTCCATGGTACGCTGCTGCGCATGCCTTTGTCA
AACGTGTCCGAGTGACAACTACTTCAGGAGGTGGTTTTAAGCTTTTGAAG
AACAAGCTTATCCGTGTCGTTCCAAGAATTCAACCACAATGGTTTCTTTC
ATTTGACATCAAACCTGAAAACAAACTTATCTATGGTTGGGGAAGTATCA
TCCATTTGACGACCGGAGGAAACGCCGGAAGAGTCGGTTACCGTATTCCT
GGAATCTGGTTTCACCCGAACTCCCGACGTCTTCATATTTGTTACGCTAT
CAACCGTTACCACAACCGCTGTGTTAACCCAAAGCACGCCTTACACCCAA
ACAAATGGGCCAACATCCAAGTTCTTCAAGTGTTTGATCGTCATcttaat
aaattcaaatatgTGGTTTTAGTAAATAATCATAAAATCGCTACCATTAT
TAATCATCACCCGCAATCTTtccaaaatgtcaaaatgtaCGTGGCCGACC
CATGGTATCATGCTGCACTTGCTCAAATCAGAAATATCGTCTTCCGTAAC
ACTCACCCTGCAATTGCCAGAggctgaaaaatatgaaaaaggtttcagga
gttttatttttatttttaatctcaTGGTTGCTTTTTTCGACcaattaccc
tcggtcaaatttcgaaatgttttaaaatttcaaaattggccTTGGGAAAC
TTATTccgaatttccctcataaccatgagattactagtacaaattaaCCA
TATTTTCGGGGTTAGCTTTTTGTTtgtaacatttgattttttttttgtta
tcatttgattttttttgaaaactttgataaaGACATAATTCAAGCGAAGA
TGTATGAAACAGGACCCTATTTCCTTTCCCCCGTAATTCACCCTACTAAA
GTATCATCAACTCCCAATAACTttaagaaattacaaaatcac
Run BLAST on NCBI

protein sequence of TCONS_00051898-protein

>TCONS_00051898-protein ID=TCONS_00051898-protein|Name=TCONS_00051898-protein|organism=Clytia hemisphaerica|type=polypeptide|length=500bp
MWTFHLTLLFSVTQFISGGYVDKGVLISRNYLVDHLPTWSPTWYVSFQVQ
PIHKIAHWTNVVRFTAGTQDFKRVGDRVPAVFFVPHTTKLHICTTLNNHV
NYCFNSHPLPLHQWASVEISQTQSAAKYLYTIRINGRTVHQVENKGARYY
MGVNVFRGDNFYGPAPARIRQLTYHNLPSVFKLVRNTIIKAYRAYFTEYE
VSFDIKPFGKLHSWTSILHVTEWDDNSAYGNRIPAVFFQPESNKLTICSA
INGNKNHCWNDKNDLPAGKFSHVIIKQKLVKEQYVYVIYLNGNKVFEIVN
TRPITLYRAKVFLSSPWYAAAHAFVKRVRVTTTSGGGFKLLKNKLIRVVP
RIQPQWFLSFDIKPENKLIYGWGSIIHLTTGGNAGRVGYRIPGIWFHPNS
RRLHICYAINRYHNRCVNPKHALHPNKWANIQVLQVFDRHLNKFKYVVLV
NNHKIATIINHHPQSFQNVKMYVADPWYHAALAQIRNIVFRNTHPAIARG
Run BLAST on NCBI

transcript from alignment at scaffold_206:132937..136856+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051898 ID=TCONS_00051898|Name=TCONS_00051898|organism=Clytia hemisphaerica|type=transcript|length=3920bp|location=Sequence derived from alignment at scaffold_206:132937..136856+ (Clytia hemisphaerica)
GCTTGAAAAAGAATAAAACTAACAATGTGGACTTTTCACTTGACCCTATT ATTTAGTGTAACGCAATTCATTTCTGGAGGTTATGTGGACAAAGGTATAT ATAGATTTTTATCTACTTGAACATTTGTTTGTGAAACTATTTCTATCAGT TTTAGATTTTTATGCACTCGGCAAAAGAAGAAACTGCCCTATATGTTAGT GCCAAAACTATTAGTAGTGGTCTCTTTAAGATCGCATTATCCATCAACAT CCGTCACAGCCCGATATTTTACCCAGTTTatatatgtgtgtttttctgta acggagacggtaaggttctaatttgactagatcctgaacAGCTGAGGACG ATGGTAactcagcacttttaccgtccttaATTTTACGGGTCAAAAGTGCG GGttgttccaaatcgcttcagtcactttaccgtcctcaaaagagcaaata cataaactcgctagtgAAACAGTGAATGCGATTCATGAATATCCTTTTTA TACTCAACAGGTGTTCTGATCAGTCGAAATTATTTAGTTGACCATCTCCC AACATGGAGCCCGACGTGGTACGTCTCTTTCCAAGTCCAACCTATCCACA AAATCGCACACTGGACAAACGTGGTTCGATTTACTGCCGGCACACAAGAT TTCAAACGGGTTGGTGATCGTGTTCCGGCTGTCTTCTTTGTACCACATAC AACGAAGCTCCATATCTGCACCACTTTGAATAACCATGTCAACTATTGTT TCAATAGCCACCCGTTGCCTCTTCACCAATGGGCTTCTGGTAAGTAACCA ACGATACCTTTTGTCCCCGGAGAGGAGACGCtctagaaaagaaaatctag ccaAATTTGAATAAACTCAGGCGAAAAATCGAaccggtgcattttcttga aaagtttgaaccattttaaggcaaaaacGTTCAGATTTTCCAATTGTACA CCCTTAGTGTGACCTACGTATGGTAgatcgtttaccttgagtgcccacCC CTGGACTCTTTTGTCATTACCTACAAATCTATCTTTATCTAAGACAATAG CTTAAGAGTCAAACGTGATAGACAAGCGAAATAATTCGTGTTCTAGTTAA CTTTAGATAGATATCAATGCACCATGGCAACAATATACTAAATATATTTC ATAATAAACGGTTGCTTTTCTTTGTTTACAGTCGAAATTTCGCAAACTCA ATCGGCCGCCAAATACCTCTACACCATTCGAATCAACGGTCGAACTGTTC ATCAAGTTGAAAACAAAGGAGCTCGCTATTACATGGGTGTCAATGTGTTC AGAGGAGACAACTTTTATGGACCAGCACCAGCAAGAATCAGACAATTGAC TTACCATAATTTACCAAGTGGTAAAGATTATTTTCTTTAGCTTGTTAGTA AAGAAATGTTATCAAATAGTCTCCTttcccggggggagggggtactaggg ttggcagataaggggtatgtgcggatgggacctccaaaaacccTTACAGA ggctgatttttgctgaaaaggtgacccttagagagactttttttaaaaag tacttgatatatttgatttttgaaaaaatccctACCcgtagagagacttt gaaagatgaaaaaaccgacccttaccgtctgcacatatccagcacccatt tttgccaaAGTATCCTCTGGTCTTTTTTACAATGAACAGAACAGAGCTCT ATCTTTGAATTATATGATAAAGATTGCGTGGTGAGAAATGTCCTGGTGGG AAAGTTTATATCTAGAGTTACCTGAAGTGGTATGAAACTgtcagtagcag aataaaaaagtgtcttttctttctgactgaCTATCTAGAGTTAAATACTC TCGAGTTACTTCTAAGTTTTTCATACAGCTCTTAGAATTGTATTTTAAGA TCAGCTCGAATTAGGGTCTTGAATCGTTTTAACCCCAAACTCTTTTCAAC TTTAGTTctcatttgaaaaatcttatcacAAGTATTTTCTTGCCTAAATA GTGTATcataattaaaggttttatttttacataagtgttcccgtttcata ccaTAGTATCTGCCTACtgttatgttatgctgatataagcaaaaaatgtt tttctttaccTTATTCtgactaatcttgctccacattcgtgtcaatccaa tgtgaaaaagctttgcGAATTAAAAGtcatgagtaagcaaacgatatcac tcttatttaaaaacaaaacctttaattattATTTCTTTACATTCTAGTTT TCAAACTTGTCCGTAACACCATCATCAAAGCATACCGTGCCTATTTTACC GAATACGAAGTTTCCTTTGACATTAAACCATTCGGCAAATTACACAGTTG GACAAGCATTCTTCACGTGACCGAATGGGATGATAACTCAGCTTACGGTA ACCGAATCCCTGCTGTCTTTTTCCAACCTGAATCAAATAAATTGACAATC TGCTCAGCTATCAATGGTAACAAAAATCACTGCTGGAACGACAAAAATGA TCTACCGGCCGGCAAATTCTCTCATGTTATCATCAAACAAAAACTTGTGA AGGAACAATACGTTTATGTCATCTATCTTAACGGAAACAAAGTTTTCGAG ATTGTCAACACTCGACCAATCACATTGTATCGGGCTAAAGTTTTCCTCTC AAGTCCATGGTACGCTGCTGCGCATGCCTTTGTCAAACGTGTCCGAGTGA CAACTACTTCAGGAGGTATTTAACTTGTTTTATTTAATCAAACCTGTTGC TCTGCTAATTAGAGAATACAGTACTATAATGAGAAAAAGAACATATCCGT TATTTAACTCGTTGGCGATCTCAATAATTTCAAGATTTTGGAAATCTCTA TCTCTTGAAAGGCTACAAATATACCCTGCAAACTATATATTTTCGGAAAG CTAAGTAAAAAATCTATCAGATGGaaggaaagaaaatttcaaaattacat tttactgacgtcagcattaatttttttgcgcaatccCCTTAAAGAGTTAA CGAGATAGATatatatttcttattttcaaaattttatgatgATTCCATTT TATTTCAGGTGGTTTTAAGCTTTTGAAGAACAAGCTTATCCGTGTCGTTC CAAGAATTCAACCACAATGGTTTCTTTCATTTGACATCAAACCTGAAAAC AAACTTATCTATGGTTGGGGAAGTATCATCCATTTGACGACCGGAGGAAA CGCCGGAAGAGTCGGTTACCGTATTCCTGGAATCTGGTTTCACCCGAACT CCCGACGTCTTCATATTTGTTACGCTATCAACCGTTACCACAACCGCTGT GTTAACCCAAAGCACGCCTTACACCCAAACAAATGGGCCAACATCCAAGT TCTTCAAGTGTTTGATCGTCATcttaataaattcaaatatgTGGTTTTAG TAAATAATCATAAAATCGCTACCATTATTAATCATCACCCGCAATCTTtc caaaatgtcaaaatgtaCGTGGCCGACCCATGGTATCATGCTGCACTTGC TCAAATCAGAAATATCGTCTTCCGTAACACTCACCCTGCAATTGCCAGAg gctgaaaaatatgaaaaaggtttcaggagttttatttttatttttaatct caTGGTTGCTTTTTTCGACcaattaccctcggtcaaatttcgaaatgttt taaaatttcaaaattggccTTGGGAAACTTATTccgaatttccctcataa ccatgagattactagtacaaattaaCCATATTTTCGGGGTTAGCTTTTTG TTtgtaacatttgattttttttttgttatcatttgattttttttgaaaac tttgataaaGACATAATTCAAGCGAAGATGTATGAAACAGGACCCTATTT CCTTTCCCCCGTAATTCACCCTACTAAAGTATCATCAACTCCCAATAACT ttaagaaattacaaaatcac

Coding sequence (CDS) from alignment at scaffold_206:132937..136856+

>TCONS_00051898 ID=TCONS_00051898|Name=TCONS_00051898|organism=Clytia hemisphaerica|type=CDS|length=7515bp|location=Sequence derived from alignment at scaffold_206:132937..136856+ (Clytia hemisphaerica)
ATGTGGACTTTTCACTTGACCCTATTATTTAGTGTAACGCAATTCATTTC
TGGAGGTTATGTGGACAAAGGTGTTCTGATCAGTCGAAATTATTTAGTTG
ACCATCTCCCAACATGGAGCCCGACGTGGTACGTCTCTTTCCAAGTCCAA
CCTATCCACAAAATCGCACACTGGACAAACGTGGTTCGATTTACTGCCGG
CACACAAGATTTCAAACGGGTTGGTGATCGTGTTCCGGCTGTCTTCTTTG
TACCACATACAACGAAGCTCCATATCTGCACCACTTTGAATAACCATGTC
AACTATTGTTTCAATAGCCACCCGTTGCCTCTTCACCAATGGGCTTCTGT
CGAAATTTCGCAAACTCAATCGGCCGCCAAATACCTCTACACCATTCGAA
TCAACGGTCGAACTGTTCATCAAGTTGAAAACAAAGGAGCTCGCTATTAC
ATGGGTGTCAATGTGTTCAGAGGAGACAACTTTTATGGACCAGCACCAGC
AAGAATCAGACAATTGACTTACCATAATTTACCAAGTGTTTTCAAACTTG
TCCGTAACACCATCATCAAAGCATACCGTGCCTATTTTACCGAATACGAA
GTTTCCTTTGACATTAAACCATTCGGCAAATTACACAGTTGGACAAGCAT
TCTTCACGTGACCGAATGGGATGATAACTCAGCTTACGGTAACCGAATCC
CTGCTGTCTTTTTCCAACCTGAATCAAATAAATTGACAATCTGCTCAGCT
ATCAATGGTAACAAAAATCACTGCTGGAACGACAAAAATGATCTACCGGC
CGGCAAATTCTCTCATGTTATCATCAAACAAAAACTTGTGAAGGAACAAT
ACGTTTATGTCATCTATCTTAACGGAAACAAAGTTTTCGAGATTGTCAAC
ACTCGACCAATCACATTGTATCGGGCTAAAGTTTTCCTCTCAAGTCCATG
GTACGCTGCTGCGCATGCCTTTGTCAAACGTGTCCGAGTGACAACTACTT
CAGGAGGTGGTTTTAAGCTTTTGAAGAACAAGCTTATCCGTGTCGTTCCA
AGAATTCAACCACAATGGTTTCTTTCATTTGACATCAAACCTGAAAACAA
ACTTATCTATGGTTGGGGAAGTATCATCCATTTGACGACCGGAGGAAACG
CCGGAAGAGTCGGTTACCGTATTCCTGGAATCTGGTTTCACCCGAACTCC
CGACGTCTTCATATTTGTTACGCTATCAACCGTTACCACAACCGCTGTGT
TAACCCAAAGCACGCCTTACACCCAAACAAATGGGCCAACATCCAAGTTC
TTCAAGTGTTTGATCGTCATcttaataaattcaaatatgTGGTTTTAGTA
AATAATCATAAAATCGCTACCATTATTAATCATCACCCGCAATCTTtcca
aaatgtcaaaatgtaCGTGGCCGACCCATGGTATCATGCTGCACTTGCTC
AAATCAGAAATATCGTCTTCCGTAACACTCACCCTGCAATTGCCAGAggc
tgaATGTGGACTTTTCACTTGACCCTATTATTTAGTGTAACGCAATTCAT
TTCTGGAGGTTATGTGGACAAAGGTGTTCTGATCAGTCGAAATTATTTAG
TTGACCATCTCCCAACATGGAGCCCGACGTGGTACGTCTCTTTCCAAGTC
CAACCTATCCACAAAATCGCACACTGGACAAACGTGGTTCGATTTACTGC
CGGCACACAAGATTTCAAACGGGTTGGTGATCGTGTTCCGGCTGTCTTCT
TTGTACCACATACAACGAAGCTCCATATCTGCACCACTTTGAATAACCAT
GTCAACTATTGTTTCAATAGCCACCCGTTGCCTCTTCACCAATGGGCTTC
TGTCGAAATTTCGCAAACTCAATCGGCCGCCAAATACCTCTACACCATTC
GAATCAACGGTCGAACTGTTCATCAAGTTGAAAACAAAGGAGCTCGCTAT
TACATGGGTGTCAATGTGTTCAGAGGAGACAACTTTTATGGACCAGCACC
AGCAAGAATCAGACAATTGACTTACCATAATTTACCAAGTGTTTTCAAAC
TTGTCCGTAACACCATCATCAAAGCATACCGTGCCTATTTTACCGAATAC
GAAGTTTCCTTTGACATTAAACCATTCGGCAAATTACACAGTTGGACAAG
CATTCTTCACGTGACCGAATGGGATGATAACTCAGCTTACGGTAACCGAA
TCCCTGCTGTCTTTTTCCAACCTGAATCAAATAAATTGACAATCTGCTCA
GCTATCAATGGTAACAAAAATCACTGCTGGAACGACAAAAATGATCTACC
GGCCGGCAAATTCTCTCATGTTATCATCAAACAAAAACTTGTGAAGGAAC
AATACGTTTATGTCATCTATCTTAACGGAAACAAAGTTTTCGAGATTGTC
AACACTCGACCAATCACATTGTATCGGGCTAAAGTTTTCCTCTCAAGTCC
ATGGTACGCTGCTGCGCATGCCTTTGTCAAACGTGTCCGAGTGACAACTA
CTTCAGGAGGTGGTTTTAAGCTTTTGAAGAACAAGCTTATCCGTGTCGTT
CCAAGAATTCAACCACAATGGTTTCTTTCATTTGACATCAAACCTGAAAA
CAAACTTATCTATGGTTGGGGAAGTATCATCCATTTGACGACCGGAGGAA
ACGCCGGAAGAGTCGGTTACCGTATTCCTGGAATCTGGTTTCACCCGAAC
TCCCGACGTCTTCATATTTGTTACGCTATCAACCGTTACCACAACCGCTG
TGTTAACCCAAAGCACGCCTTACACCCAAACAAATGGGCCAACATCCAAG
TTCTTCAAGTGTTTGATCGTCATcttaataaattcaaatatgTGGTTTTA
GTAAATAATCATAAAATCGCTACCATTATTAATCATCACCCGCAATCTTt
ccaaaatgtcaaaatgtaCGTGGCCGACCCATGGTATCATGCTGCACTTG
CTCAAATCAGAAATATCGTCTTCCGTAACACTCACCCTGCAATTGCCAGA
ggctgaATGTGGACTTTTCACTTGACCCTATTATTTAGTGTAACGCAATT
CATTTCTGGAGGTTATGTGGACAAAGGTGTTCTGATCAGTCGAAATTATT
TAGTTGACCATCTCCCAACATGGAGCCCGACGTGGTACGTCTCTTTCCAA
GTCCAACCTATCCACAAAATCGCACACTGGACAAACGTGGTTCGATTTAC
TGCCGGCACACAAGATTTCAAACGGGTTGGTGATCGTGTTCCGGCTGTCT
TCTTTGTACCACATACAACGAAGCTCCATATCTGCACCACTTTGAATAAC
CATGTCAACTATTGTTTCAATAGCCACCCGTTGCCTCTTCACCAATGGGC
TTCTGTCGAAATTTCGCAAACTCAATCGGCCGCCAAATACCTCTACACCA
TTCGAATCAACGGTCGAACTGTTCATCAAGTTGAAAACAAAGGAGCTCGC
TATTACATGGGTGTCAATGTGTTCAGAGGAGACAACTTTTATGGACCAGC
ACCAGCAAGAATCAGACAATTGACTTACCATAATTTACCAAGTGTTTTCA
AACTTGTCCGTAACACCATCATCAAAGCATACCGTGCCTATTTTACCGAA
TACGAAGTTTCCTTTGACATTAAACCATTCGGCAAATTACACAGTTGGAC
AAGCATTCTTCACGTGACCGAATGGGATGATAACTCAGCTTACGGTAACC
GAATCCCTGCTGTCTTTTTCCAACCTGAATCAAATAAATTGACAATCTGC
TCAGCTATCAATGGTAACAAAAATCACTGCTGGAACGACAAAAATGATCT
ACCGGCCGGCAAATTCTCTCATGTTATCATCAAACAAAAACTTGTGAAGG
AACAATACGTTTATGTCATCTATCTTAACGGAAACAAAGTTTTCGAGATT
GTCAACACTCGACCAATCACATTGTATCGGGCTAAAGTTTTCCTCTCAAG
TCCATGGTACGCTGCTGCGCATGCCTTTGTCAAACGTGTCCGAGTGACAA
CTACTTCAGGAGGTGGTTTTAAGCTTTTGAAGAACAAGCTTATCCGTGTC
GTTCCAAGAATTCAACCACAATGGTTTCTTTCATTTGACATCAAACCTGA
AAACAAACTTATCTATGGTTGGGGAAGTATCATCCATTTGACGACCGGAG
GAAACGCCGGAAGAGTCGGTTACCGTATTCCTGGAATCTGGTTTCACCCG
AACTCCCGACGTCTTCATATTTGTTACGCTATCAACCGTTACCACAACCG
CTGTGTTAACCCAAAGCACGCCTTACACCCAAACAAATGGGCCAACATCC
AAGTTCTTCAAGTGTTTGATCGTCATcttaataaattcaaatatgTGGTT
TTAGTAAATAATCATAAAATCGCTACCATTATTAATCATCACCCGCAATC
TTtccaaaatgtcaaaatgtaCGTGGCCGACCCATGGTATCATGCTGCAC
TTGCTCAAATCAGAAATATCGTCTTCCGTAACACTCACCCTGCAATTGCC
AGAggctgaATGTGGACTTTTCACTTGACCCTATTATTTAGTGTAACGCA
ATTCATTTCTGGAGGTTATGTGGACAAAGGTGTTCTGATCAGTCGAAATT
ATTTAGTTGACCATCTCCCAACATGGAGCCCGACGTGGTACGTCTCTTTC
CAAGTCCAACCTATCCACAAAATCGCACACTGGACAAACGTGGTTCGATT
TACTGCCGGCACACAAGATTTCAAACGGGTTGGTGATCGTGTTCCGGCTG
TCTTCTTTGTACCACATACAACGAAGCTCCATATCTGCACCACTTTGAAT
AACCATGTCAACTATTGTTTCAATAGCCACCCGTTGCCTCTTCACCAATG
GGCTTCTGTCGAAATTTCGCAAACTCAATCGGCCGCCAAATACCTCTACA
CCATTCGAATCAACGGTCGAACTGTTCATCAAGTTGAAAACAAAGGAGCT
CGCTATTACATGGGTGTCAATGTGTTCAGAGGAGACAACTTTTATGGACC
AGCACCAGCAAGAATCAGACAATTGACTTACCATAATTTACCAAGTGTTT
TCAAACTTGTCCGTAACACCATCATCAAAGCATACCGTGCCTATTTTACC
GAATACGAAGTTTCCTTTGACATTAAACCATTCGGCAAATTACACAGTTG
GACAAGCATTCTTCACGTGACCGAATGGGATGATAACTCAGCTTACGGTA
ACCGAATCCCTGCTGTCTTTTTCCAACCTGAATCAAATAAATTGACAATC
TGCTCAGCTATCAATGGTAACAAAAATCACTGCTGGAACGACAAAAATGA
TCTACCGGCCGGCAAATTCTCTCATGTTATCATCAAACAAAAACTTGTGA
AGGAACAATACGTTTATGTCATCTATCTTAACGGAAACAAAGTTTTCGAG
ATTGTCAACACTCGACCAATCACATTGTATCGGGCTAAAGTTTTCCTCTC
AAGTCCATGGTACGCTGCTGCGCATGCCTTTGTCAAACGTGTCCGAGTGA
CAACTACTTCAGGAGGTGGTTTTAAGCTTTTGAAGAACAAGCTTATCCGT
GTCGTTCCAAGAATTCAACCACAATGGTTTCTTTCATTTGACATCAAACC
TGAAAACAAACTTATCTATGGTTGGGGAAGTATCATCCATTTGACGACCG
GAGGAAACGCCGGAAGAGTCGGTTACCGTATTCCTGGAATCTGGTTTCAC
CCGAACTCCCGACGTCTTCATATTTGTTACGCTATCAACCGTTACCACAA
CCGCTGTGTTAACCCAAAGCACGCCTTACACCCAAACAAATGGGCCAACA
TCCAAGTTCTTCAAGTGTTTGATCGTCATcttaataaattcaaatatgTG
GTTTTAGTAAATAATCATAAAATCGCTACCATTATTAATCATCACCCGCA
ATCTTtccaaaatgtcaaaatgtaCGTGGCCGACCCATGGTATCATGCTG
CACTTGCTCAAATCAGAAATATCGTCTTCCGTAACACTCACCCTGCAATT
GCCAGAggctgaATGTGGACTTTTCACTTGACCCTATTATTTAGTGTAAC
GCAATTCATTTCTGGAGGTTATGTGGACAAAGGTGTTCTGATCAGTCGAA
ATTATTTAGTTGACCATCTCCCAACATGGAGCCCGACGTGGTACGTCTCT
TTCCAAGTCCAACCTATCCACAAAATCGCACACTGGACAAACGTGGTTCG
ATTTACTGCCGGCACACAAGATTTCAAACGGGTTGGTGATCGTGTTCCGG
CTGTCTTCTTTGTACCACATACAACGAAGCTCCATATCTGCACCACTTTG
AATAACCATGTCAACTATTGTTTCAATAGCCACCCGTTGCCTCTTCACCA
ATGGGCTTCTGTCGAAATTTCGCAAACTCAATCGGCCGCCAAATACCTCT
ACACCATTCGAATCAACGGTCGAACTGTTCATCAAGTTGAAAACAAAGGA
GCTCGCTATTACATGGGTGTCAATGTGTTCAGAGGAGACAACTTTTATGG
ACCAGCACCAGCAAGAATCAGACAATTGACTTACCATAATTTACCAAGTG
TTTTCAAACTTGTCCGTAACACCATCATCAAAGCATACCGTGCCTATTTT
ACCGAATACGAAGTTTCCTTTGACATTAAACCATTCGGCAAATTACACAG
TTGGACAAGCATTCTTCACGTGACCGAATGGGATGATAACTCAGCTTACG
GTAACCGAATCCCTGCTGTCTTTTTCCAACCTGAATCAAATAAATTGACA
ATCTGCTCAGCTATCAATGGTAACAAAAATCACTGCTGGAACGACAAAAA
TGATCTACCGGCCGGCAAATTCTCTCATGTTATCATCAAACAAAAACTTG
TGAAGGAACAATACGTTTATGTCATCTATCTTAACGGAAACAAAGTTTTC
GAGATTGTCAACACTCGACCAATCACATTGTATCGGGCTAAAGTTTTCCT
CTCAAGTCCATGGTACGCTGCTGCGCATGCCTTTGTCAAACGTGTCCGAG
TGACAACTACTTCAGGAGGTGGTTTTAAGCTTTTGAAGAACAAGCTTATC
CGTGTCGTTCCAAGAATTCAACCACAATGGTTTCTTTCATTTGACATCAA
ACCTGAAAACAAACTTATCTATGGTTGGGGAAGTATCATCCATTTGACGA
CCGGAGGAAACGCCGGAAGAGTCGGTTACCGTATTCCTGGAATCTGGTTT
CACCCGAACTCCCGACGTCTTCATATTTGTTACGCTATCAACCGTTACCA
CAACCGCTGTGTTAACCCAAAGCACGCCTTACACCCAAACAAATGGGCCA
ACATCCAAGTTCTTCAAGTGTTTGATCGTCATcttaataaattcaaatat
gTGGTTTTAGTAAATAATCATAAAATCGCTACCATTATTAATCATCACCC
GCAATCTTtccaaaatgtcaaaatgtaCGTGGCCGACCCATGGTATCATG
CTGCACTTGCTCAAATCAGAAATATCGTCTTCCGTAACACTCACCCTGCA
ATTGCCAGAggctga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032849XLOC_032849Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051898-exon-scaffold_206-1491911889:132937..133030TCONS_00051898-exon-scaffold_206-1491911889:132937..133030Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1510915933:132937..133030TCONS_00051898-exon-scaffold_206-1510915933:132937..133030Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1575043694:132937..133030TCONS_00051898-exon-scaffold_206-1575043694:132937..133030Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1491911889:133447..133725TCONS_00051898-exon-scaffold_206-1491911889:133447..133725Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1510915933:133447..133725TCONS_00051898-exon-scaffold_206-1510915933:133447..133725Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1575043694:133447..133725TCONS_00051898-exon-scaffold_206-1575043694:133447..133725Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1491911889:134118..134306TCONS_00051898-exon-scaffold_206-1491911889:134118..134306Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1510915933:134118..134306TCONS_00051898-exon-scaffold_206-1510915933:134118..134306Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1575043694:134118..134306TCONS_00051898-exon-scaffold_206-1575043694:134118..134306Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1491911889:135184..135651TCONS_00051898-exon-scaffold_206-1491911889:135184..135651Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1510915933:135184..135651TCONS_00051898-exon-scaffold_206-1510915933:135184..135651Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1575043694:135184..135651TCONS_00051898-exon-scaffold_206-1575043694:135184..135651Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1491911889:135995..136856TCONS_00051898-exon-scaffold_206-1491911889:135995..136856Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1510915933:135995..136856TCONS_00051898-exon-scaffold_206-1510915933:135995..136856Clytia hemisphaericaexon
TCONS_00051898-exon-scaffold_206-1575043694:135995..136856TCONS_00051898-exon-scaffold_206-1575043694:135995..136856Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051898-proteinTCONS_00051898-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_206supercontigscaffold_206:132937..136856 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.221224 0.0861926 0.274973 0.306628 0.233504 0.0963407 17.3906 22.0172 445.565 402.419 25.2231 156.099 0.117547 0.0994793 10.2834 2.12776 0.0926833 0.0389515 1.22328 0.195188 0.105119 0.0928011 0 0.202586 0 0.123005 0.0877563 0.0975596 0.0496563 0.12329
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051898 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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