TCONS_00051896 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051896
Unique NameTCONS_00051896
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2140

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051896 ID=TCONS_00051896|Name=TCONS_00051896|organism=Clytia hemisphaerica|type=transcript|length=2140bp
GAATTATCGAGTGTTAAAATGTTGCAAGTCGAAAATCTTCAAGGCTTTGC
AGCCAAAATAACACTTTGCATTATATTgatcttttttaatttcagataaa
aacaaattaatttggaaaagtttttgGAAGCAAAGACAATTAAAGCAGCT
TTGATAAAATCATATTTAGAGCCAGTTATAATGGCCGAGACGGAGCTTCT
CTTGGCTTCCTCTTCACCAACTTCGTCCATCCAACAAACAGAGGAATATG
TTGTAATATCGTCCAATCAGAATCGTgataagaaagaagaaaatagaATA
CTTGTACCATTATCGAAAGTCCCTTTACTGAATGCTTGCTCGTTGAGGAA
AGACAAAGGGACGAACAATATACAGAAATCATTAGAGAACTTTACAGACA
GCAATACGAACACTAACAATGATGGTAGTCCCAGTACTATCACTAAAAGT
CGTAGTCGTAGTTGTGGTTTCATTTCTGATGTGAATTTCTATAATGAACC
TTTGGAAATTTCAATCAATAATAAAGAGGGTGGTGTTGTACAGGCAACAA
CAAATGCTCAAGCATCACCTTTGGATGCTTCAAACACGAGGATATTCACT
GCAAACAGGATAATGCACTGTGATGATTCCAGTTGTTCTGGAGGTCAAGG
TTCTCCATTGGGCAATGCACCAAACATTGAACTACGAAATATCAATGGTC
AAATTCTCATGATGCCCAAACGACCAAGCTTAGATGCTGGTGATTTGGAA
ATGCTAATCTACAACAGTCAGCCGTCTTTCATGTTTCGTGCAGAAACTTC
ACAAAGTTCAGAATCAGTATTCTGTAGGATATGCCATTGTATTGGTGAAG
AGAAACTGATAGCACCATGCAAGTGTGCTGGTTCGACACGTTATGTGCAT
GCTTCATGTTTGGTCACGTGGTTTAAGAAAAGTGTCAAACACCAATGTGA
ACTATGCAAGTCAGACGTTAAAATACGGAAAATCAATCATCGTATACTAC
TATGGCGGAAACCGGAAGACAGACCTGTTCCGTTGATATGGTTCACCGTA
TTCTTTATTGGTTTATTCTTGAACATTATCTCAATCTACGTGAACGCTAG
CGACTATTGTGAATCGACGGCGTGTTTAATATTCTACGTGGTCAACGGGT
TTGGTATCGTTCTTGATGCTGCGTTTTTATGGTTTTGGTTTTTAAAGTGT
AAACATTACTGGAAGAAATGGTGTGCGTTGAACCAGGACTGGTTTATTGA
TGATGGGGAGGTGGAAGATGATCAACTGCATGTACGATACGTTCAAGGAT
GTCCGGCTTGATCTAATTGAATATTTTTACCGgacaaataataaaaataa
cggaATGGTGTTATGATGGATTCCCATGAGTGCGACCATGCTCATGTGTG
ACTGCCAGCTCGGTATATGACAATGACTGTTTTAAGTGAAAGCCCGTTTT
ATCATCCGTATCGAATGATGTGCTCTTTGTGTTTTGTACCAAACGATTTC
GTTATCAATTGTTCGATTCCGCTTTAAAATGCTATCAAATTCATGTTGGA
ATTCCGATTCGTCGTTCATTATTTTTCTTGATGTGTATATTGATAGAAAT
GCTGGGAGATTGGCATGATAATTCTGTTGGAACTTTATTTAGACTCTTTT
GAGTTGCCTCGTTTTCAAGATTTAGTTGCCAAAATACCACATCTTGCAAA
CAGCTGTGATAATAATTACCGTTTAGTGAACATGAATGCACTTTTGTTTG
CAAAGTGATAACAAATGACAAATTTGGGGATGTATAAAAAAGTCTCAGTG
CAGTATTGAAGTGAGTTTCCAAACAAGGCTAAACTGCATCTCAAGAAGAG
TTAAAGattgtttggtttgttttggttttatgAATTATCCACCTGTTTTA
AGGTAATAGTTGAAACGCAATGCATTATGGTCACATACTTGCATTGTGTT
ATGTtggatttgatttttatttgtTGGAAGCAACTGAAGAATATTAAATT
ATCTTCTTGGTCTTGTAGGATTCTTTATCTTTGGTGAATTTGTAGTTTAA
ACTCAAGGCTggaattgatttttcactacaTAACAGTTCTAAcacttaaa
aaataattatagttgttattgaattttgaaattaaagttt
Run BLAST on NCBI

protein sequence of TCONS_00051896-protein

>TCONS_00051896-protein ID=TCONS_00051896-protein|Name=TCONS_00051896-protein|organism=Clytia hemisphaerica|type=polypeptide|length=376bp
MAETELLLASSSPTSSIQQTEEYVVISSNQNRDKKEENRILVPLSKVPLL
NACSLRKDKGTNNIQKSLENFTDSNTNTNNDGSPSTITKSRSRSCGFISD
VNFYNEPLEISINNKEGGVVQATTNAQASPLDASNTRIFTANRIMHCDDS
SCSGGQGSPLGNAPNIELRNINGQILMMPKRPSLDAGDLEMLIYNSQPSF
MFRAETSQSSESVFCRICHCIGEEKLIAPCKCAGSTRYVHASCLVTWFKK
SVKHQCELCKSDVKIRKINHRILLWRKPEDRPVPLIWFTVFFIGLFLNII
SIYVNASDYCESTACLIFYVVNGFGIVLDAAFLWFWFLKCKHYWKKWCAL
NQDWFIDDGEVEDDQLHVRYVQGCPA
Run BLAST on NCBI

transcript from alignment at scaffold_206:65506..72558+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051896 ID=TCONS_00051896|Name=TCONS_00051896|organism=Clytia hemisphaerica|type=transcript|length=7053bp|location=Sequence derived from alignment at scaffold_206:65506..72558+ (Clytia hemisphaerica)
GAATTATCGAGTGTTAAAATGTTGCAAGTCGAAAATCTTCAAGGCTTTGC AGCCAAAATAACACTTTGCATTATATTgatcttttttaatttcagataaa aacaaattaatttggaaaagtttttgGAAGCAAAGACAATTAAAGCAGCT TTGATAAAATCATATTTAGAGCCAGTTATAATGGCCGAGACGGAGCTTCT CTTGGCTTCCTCTTCACCAACTTCGTCCATCCAACAAACAGAGGAATATG TTGTAATATCGTCCAATCAGAATCGTgataagaaagaagaaaatagaATA CTTGTACCATTATCGAAAGTCCCTTTACTGAATGCTTGCTCGTTGAGGAA AGACAAAGGGACGAACAATATACAGAAATCATTAGAGAACTTTACAGACA GCAATACGAACACTAACAATGATGGTAGTCCCAGTACTATCACTAAAAGT CGTAGTCGTAGTTGTGGTTTCATTTCTGATGTGAATTTCTATAATGAACC TTTGGAAATTTCAATCAATAATAAAGAGGGTGGTGTTGTACAGGCAACAA CAAATGCTCAAGCATCACCTTTGGATGCTTCAAACACGAGGATATTCACT GCAAACAGGTATTTTGGATGacttttttattattatgtTAACTATGTAAG TTCCACAAAACCCAAATAATTGCATTGGGTTGGTGTTATTTAGGGccctt ttttccttcttttattTATGTATGGATTGAACTCCAAAAAATCAGTTAAG TTGAAAATACTAAGTGAAAAAGTCGGTGAGTATAAATAAACAAACGTAAA TTTGTTTATGACGTCGTTTATAAATGAGTATTGTTTTGATTAGGGTGCCA ATGATCTTGACCTCTAAATGATGTCATAGCAGTGACGTTTAAGTACCTTT CAGTACTCATAGATTTGCCTTCCTTACAATATAAACAATTATTAAACTAT TCATTTGTTGAATGAATTATAAAGATACCTGCTCTCATATGAAATGATAT TTATCATACAGGGATTTTTTTAAGCACCTTGAGCTGGGCCGTTTTTGTAA ACTTAGATTGAGTTTCTAATATGCCTTAAAGGGAATTTTCTCAGCAAAGC TATCATCGATATATTGATGAAGCTGGGGGTTTGGTTGGTGTTCAGAGGGT GCAgctcccaaaaatattttgaatatgtaGATGATATTAGAGAATTTGGT TTGtaaacaacaaacaagtttaattttgctagaaaatatcttttatatTT TGGATGGAGTTTCAAAAACTTACTCTTAGAGAATCTTATGTACggacata aaaaagtgcttagaaaaatccctgtcATGGTGTTTTAAAACTCTTGGTCC GTGTCAGATATACCGGGGAAACTTTTCGACGAAAATATGTCTCATCAAAA GCGTCCTAAGTGatttgagttttgatattttgaaagtaGATATCTTTAAC TTAAGATTTGAGTTCATgatgttttcaaatcaaaattcacTCTTtcgaaa aagcttaaaaaatacGTAAAGCGAGGTATTAGATTATGCATTTTTAAGAT AAATTGGAACTGGTCatatttcaaatcatttttgtCATAAAACTCATTAA ACAAGTCAATTGATAAGCAGTTTTCTAGTTAATTGTACGTTGTACAAATA TGATGCCtcttttactttttgaaaagttatctttgactttaaaagccCAC TAGTCAGGAACTAGTGGGTCAGGTTCAAAAAGTTGCACGTCAAATTGTAG GTGATGATAATTTACCGGGTgcagcagaaaaaactttggacgtttggcga gccactgaggccgaacaaagtcttgtttagactcaaaaccacttttatta gaaagaggacatgCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt aaaaagttataccgcaaaatttaagttagcatgtcctctttctaataaaa gtggttttgagtctaaacaagactttgttcggcctcagtggctcgccaaa tgtccaaagttttttctgctgcACCCGGTACTTACAGAACTTCAAGcact tgagaaaattttttggaagttttttgTATGCCATGTATTATTCGTCAAGA AATTAGTATAGTTCACGATAAACGTGAATTCTTTTGTTGCCGTATGGTAA CCACTCTCAAGAGAATTCCTCTAGCCTCAATGACGTGGTTTCTACATGAA AGCTGATCAACACTTATCATGAACTGAATAATAGTATTAACTTTTGGTGT CAGCATTGGATTGTGCTAACCTTTCTGTTATAATTCGCTTCTTTTCAGGA TAATGCACTGTGATGATTCCAGTTGTTCTGGAGGTCAAGGTTCTCCATTG GGCAATGCACCAAACATTGAACTACGAAATATCAATGGTCAAATTCTCAT GATGCCCAAACGACCAAGCTTAGATGCTGTAAGTTTTATGGTCAAAACCT AAAGATAACCATTATCATCAACACATCgccgttgacaaatcaaaagggCC AATCACAAAATTAGTGTCTGAGAAAGCTAGGAGTTTTTCTGTCTAGTTGG CCTTAAATTTAAGATTGCCCCTTTTGCATAGTGAGGAGGGTCCCATCTAC ATGAAACagggtcaatctcaaaatttatgcccagacaaacagaaaaattc ttatttctcaCAGGCAATAATTTTGAGGTTGGaccttttgatttgtcaac ggcGACATATAATTCAAGTATAACTTTGtttatttaaaatgttttatgGT ACAAACTTGGTACTCTGTAGCATAGTATGTCAATGAAGTTTGAAATTTGC ATAGATATCTGGTCTGTTCGCTGGCAATAAAATTGCTACAATTTCATACC AATAGGTTTGTAGCACTTCAAATGATAcagaaaataataattgatagCCA ATTGATGTTCCCatttagaattttgaccaaaaactgAACCTAGATTTGAT AGATGGAAATATTGATAGTTTTTTTTTCGCTCACAGGGTGATTTGGAAAT GCTAATCTACAACAGTCAGCCGTCTTTCATGTTTCGTGCAGAAACTTCAC AAAGTTCAGAATCAGTATTCTGTAGGATATGCCATTGGTAAGAACTCATC TTAGTTGCTATTTGgttaggttttttttttttcaatgaagtTCTTTGATA CTAACGAAAAGCTCGCTGGTCTACCCTTTTATAACACGGGTAGTTAGTTG GATTTATGGAAAAAGGTGTACAGGAAGTAGTTAGGAAATAAAGGCTCTAT TGTTTTGACCTGAGAACGCAAGTAAACTTCGCAAGTCGATTTCTAATAAA TTTCCTTTTGTTGCATACTCaggggggggtgaagcagttagtacaagaca tcatgcctactaacTGCTTTCTCGGAAGAAGTTAGTAACACCACCACCTT GGTACACTTAGTACAGTTAGTANNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNACCTTGAAAAAGCTTGGTTTTGATAGCA AAAGTCTTATTTTGACTCGAGTTATTACTGAAATCTTGGTGCGGGTGAAA ATTTTCTATAAATCATCTATTTCAAACTAAAAAACTAGCAAACGTCTTTT ATGCACCTCATTCAAGAGTGAAATTCTGtcattttgatcaatttcagCCT TGAGGCTTTTTTTTCTGAGCAGAAAACCTTGATAATATCCTATCAGGGCC AAAAcccttgaaaaaaattccgtAGACACCCTGGAGTAGTTGGTTGTATT AATGAGTTGGGTAAAAGTAGCGGGGAAATAAagacttttttgttgttgac cTGATAACGCAAGTAAAATTTCCACGTCGATTTCTAATAAACTTTCCTTT TGTCGCATACTCCTAAATTTGACAgtatttaacttttattttcttgGTAC TGATTACAGTATTGGTGAAGAGAAACTGATAGCACCATGCAAGTGTGCTG GTTCGACACGTTATGTGCATGCTTCATGTTTGGTCACGTGGTTTAAGAAA AGTGTCAAACACCAATGTGAACTATGCAAGTCAGACGTTAAAATACGGAA AATCAATCATCGTATACTACTAGTAAGATAATGGTCCCTTAATGTTTTTC CGTCAAGACAGAAATTACTTTGACTGTGTGTGAACTTGCATCTGGAATTC TTTCATAAATTTCTTGCCTCTATGGGACCTAATATACACATCACTTTCAG ACATTGTTAGCTCTGTGCTTGTGGCACACTCGAGTCGTGGTGTATTTTTG TATTGAACAAATTTATCGGGGCACTTTTCCATGATTTTACATTATAGGAT GGTGGCTTTCCATTCTTTAATATACGtttattctcaactttttgGGGAAG ATAATCCTTGAATATTCTTACGGCATTCTTAGTTAATGATCCAAACCCAA TCTAAGtttaagcaaaaatatttattttaaaaaattatttaaagtcTTGA GCATTGCTGGGGGATAATTTAATTGACAATTTACAGATAAAGATGCTCTA AAATTAGCAAGCTTAGTCCAAGTTGCCAAATTTCATGAATGTGATATTCG TATCATATTATCTTTATTGTTTTATGGAACAAACCATTTAAAAAGCGTAA AAGGAAGccaaaagaatttttgaatttattattttaaatcacaaatttct tcttttccttAACAGTGGCGGAAACCGGAAGACAGACCTGTTCCGTTGAT ATGGTTCACCGTATTCTTTATTGGTTTATTCTTGAACATTATCTCAATCT ACGTGAACGCTAGCGACTATTGTGAATCGACGGCGTGTTTAATATTCTAC GTGGTCAACGGGTTTGGTATCGTTCTTGATGCTGCGTTTTTATGGTTTTG GTTTTTAAAGTGTAAACATTACTGGAAGAAATGGTGTGCGTTGAACCAGG ACTGGTTTATTGATGATGGGGAGGTGGAAGATGATCAACTGCATGTACGA TACGTTCAAGGATGTCCGGCTTGATCTAATTGAATATTTTTACCGgacaa ataataaaaataacggaATGGTGTTATGATGGATTCCCATGAGTGCGACC ATGCTCATGTGTGACTGCCAGCTCGGTATATGACAATGACTGTTTTAAGT GAAAGCCCGTTTTATCATCCGTATCGAATGATGTGCTCTTTGTGTTTTGT ACCAAACGATTTCGTTATCAATTGTTCGATTCCGCTTTAAAATGCTATCA AATTCATGTTGGAATTCCGATTCGTCGTTCATTATTTTTCTTGATGTGTA TATTGATAGAAATGCTGGGAGATTGGCATGATAATTCTGTTGGAACTTTA TTTAGACTCTTTTGAGTTGCCTCGTTTTCAAGATTTAGTTGCCAAAATAC CACATCTTGCAAACAGCTGTGATAATAATTACCGTTTAGTGAACATGAAT GCACTTTTGTTTGCAAAGTGATAACAAATGACAAATTTGGGGATGTATAA AAAAGTCTCAGTGCAGTATTGAAGTGAGTTTCCAAACAAGGCTAAACTGC ATCTCAAGAAGAGTTAAAGattgtttggtttgttttggttttatgAATTA TCCACCTGTTTTAAGGTAATAGTTGAAACGCAATGCATTATGGTCACATA CTTGCATTGTGTTATGTtggatttgatttttatttgtTGGAAGCAACTGA AGAATATTAAATTATCTTCTTGGTCTTGTAGGATTCTTTATCTTTGGTGA ATTTGTAGTTTAAACTCAAGGCTggaattgatttttcactacaTAACAGT TCTAAcacttaaaaaataattatagttgttattgaattttgaaattaaag ttt

Coding sequence (CDS) from alignment at scaffold_206:65506..72558+

>TCONS_00051896 ID=TCONS_00051896|Name=TCONS_00051896|organism=Clytia hemisphaerica|type=CDS|length=5655bp|location=Sequence derived from alignment at scaffold_206:65506..72558+ (Clytia hemisphaerica)
ATGGCCGAGACGGAGCTTCTCTTGGCTTCCTCTTCACCAACTTCGTCCAT
CCAACAAACAGAGGAATATGTTGTAATATCGTCCAATCAGAATCGTgata
agaaagaagaaaatagaATACTTGTACCATTATCGAAAGTCCCTTTACTG
AATGCTTGCTCGTTGAGGAAAGACAAAGGGACGAACAATATACAGAAATC
ATTAGAGAACTTTACAGACAGCAATACGAACACTAACAATGATGGTAGTC
CCAGTACTATCACTAAAAGTCGTAGTCGTAGTTGTGGTTTCATTTCTGAT
GTGAATTTCTATAATGAACCTTTGGAAATTTCAATCAATAATAAAGAGGG
TGGTGTTGTACAGGCAACAACAAATGCTCAAGCATCACCTTTGGATGCTT
CAAACACGAGGATATTCACTGCAAACAGGATAATGCACTGTGATGATTCC
AGTTGTTCTGGAGGTCAAGGTTCTCCATTGGGCAATGCACCAAACATTGA
ACTACGAAATATCAATGGTCAAATTCTCATGATGCCCAAACGACCAAGCT
TAGATGCTGGTGATTTGGAAATGCTAATCTACAACAGTCAGCCGTCTTTC
ATGTTTCGTGCAGAAACTTCACAAAGTTCAGAATCAGTATTCTGTAGGAT
ATGCCATTGTATTGGTGAAGAGAAACTGATAGCACCATGCAAGTGTGCTG
GTTCGACACGTTATGTGCATGCTTCATGTTTGGTCACGTGGTTTAAGAAA
AGTGTCAAACACCAATGTGAACTATGCAAGTCAGACGTTAAAATACGGAA
AATCAATCATCGTATACTACTATGGCGGAAACCGGAAGACAGACCTGTTC
CGTTGATATGGTTCACCGTATTCTTTATTGGTTTATTCTTGAACATTATC
TCAATCTACGTGAACGCTAGCGACTATTGTGAATCGACGGCGTGTTTAAT
ATTCTACGTGGTCAACGGGTTTGGTATCGTTCTTGATGCTGCGTTTTTAT
GGTTTTGGTTTTTAAAGTGTAAACATTACTGGAAGAAATGGTGTGCGTTG
AACCAGGACTGGTTTATTGATGATGGGGAGGTGGAAGATGATCAACTGCA
TGTACGATACGTTCAAGGATGTCCGGCTTGAATGGCCGAGACGGAGCTTC
TCTTGGCTTCCTCTTCACCAACTTCGTCCATCCAACAAACAGAGGAATAT
GTTGTAATATCGTCCAATCAGAATCGTgataagaaagaagaaaatagaAT
ACTTGTACCATTATCGAAAGTCCCTTTACTGAATGCTTGCTCGTTGAGGA
AAGACAAAGGGACGAACAATATACAGAAATCATTAGAGAACTTTACAGAC
AGCAATACGAACACTAACAATGATGGTAGTCCCAGTACTATCACTAAAAG
TCGTAGTCGTAGTTGTGGTTTCATTTCTGATGTGAATTTCTATAATGAAC
CTTTGGAAATTTCAATCAATAATAAAGAGGGTGGTGTTGTACAGGCAACA
ACAAATGCTCAAGCATCACCTTTGGATGCTTCAAACACGAGGATATTCAC
TGCAAACAGGATAATGCACTGTGATGATTCCAGTTGTTCTGGAGGTCAAG
GTTCTCCATTGGGCAATGCACCAAACATTGAACTACGAAATATCAATGGT
CAAATTCTCATGATGCCCAAACGACCAAGCTTAGATGCTGGTGATTTGGA
AATGCTAATCTACAACAGTCAGCCGTCTTTCATGTTTCGTGCAGAAACTT
CACAAAGTTCAGAATCAGTATTCTGTAGGATATGCCATTGTATTGGTGAA
GAGAAACTGATAGCACCATGCAAGTGTGCTGGTTCGACACGTTATGTGCA
TGCTTCATGTTTGGTCACGTGGTTTAAGAAAAGTGTCAAACACCAATGTG
AACTATGCAAGTCAGACGTTAAAATACGGAAAATCAATCATCGTATACTA
CTATGGCGGAAACCGGAAGACAGACCTGTTCCGTTGATATGGTTCACCGT
ATTCTTTATTGGTTTATTCTTGAACATTATCTCAATCTACGTGAACGCTA
GCGACTATTGTGAATCGACGGCGTGTTTAATATTCTACGTGGTCAACGGG
TTTGGTATCGTTCTTGATGCTGCGTTTTTATGGTTTTGGTTTTTAAAGTG
TAAACATTACTGGAAGAAATGGTGTGCGTTGAACCAGGACTGGTTTATTG
ATGATGGGGAGGTGGAAGATGATCAACTGCATGTACGATACGTTCAAGGA
TGTCCGGCTTGAATGGCCGAGACGGAGCTTCTCTTGGCTTCCTCTTCACC
AACTTCGTCCATCCAACAAACAGAGGAATATGTTGTAATATCGTCCAATC
AGAATCGTgataagaaagaagaaaatagaATACTTGTACCATTATCGAAA
GTCCCTTTACTGAATGCTTGCTCGTTGAGGAAAGACAAAGGGACGAACAA
TATACAGAAATCATTAGAGAACTTTACAGACAGCAATACGAACACTAACA
ATGATGGTAGTCCCAGTACTATCACTAAAAGTCGTAGTCGTAGTTGTGGT
TTCATTTCTGATGTGAATTTCTATAATGAACCTTTGGAAATTTCAATCAA
TAATAAAGAGGGTGGTGTTGTACAGGCAACAACAAATGCTCAAGCATCAC
CTTTGGATGCTTCAAACACGAGGATATTCACTGCAAACAGGATAATGCAC
TGTGATGATTCCAGTTGTTCTGGAGGTCAAGGTTCTCCATTGGGCAATGC
ACCAAACATTGAACTACGAAATATCAATGGTCAAATTCTCATGATGCCCA
AACGACCAAGCTTAGATGCTGGTGATTTGGAAATGCTAATCTACAACAGT
CAGCCGTCTTTCATGTTTCGTGCAGAAACTTCACAAAGTTCAGAATCAGT
ATTCTGTAGGATATGCCATTGTATTGGTGAAGAGAAACTGATAGCACCAT
GCAAGTGTGCTGGTTCGACACGTTATGTGCATGCTTCATGTTTGGTCACG
TGGTTTAAGAAAAGTGTCAAACACCAATGTGAACTATGCAAGTCAGACGT
TAAAATACGGAAAATCAATCATCGTATACTACTATGGCGGAAACCGGAAG
ACAGACCTGTTCCGTTGATATGGTTCACCGTATTCTTTATTGGTTTATTC
TTGAACATTATCTCAATCTACGTGAACGCTAGCGACTATTGTGAATCGAC
GGCGTGTTTAATATTCTACGTGGTCAACGGGTTTGGTATCGTTCTTGATG
CTGCGTTTTTATGGTTTTGGTTTTTAAAGTGTAAACATTACTGGAAGAAA
TGGTGTGCGTTGAACCAGGACTGGTTTATTGATGATGGGGAGGTGGAAGA
TGATCAACTGCATGTACGATACGTTCAAGGATGTCCGGCTTGAATGGCCG
AGACGGAGCTTCTCTTGGCTTCCTCTTCACCAACTTCGTCCATCCAACAA
ACAGAGGAATATGTTGTAATATCGTCCAATCAGAATCGTgataagaaaga
agaaaatagaATACTTGTACCATTATCGAAAGTCCCTTTACTGAATGCTT
GCTCGTTGAGGAAAGACAAAGGGACGAACAATATACAGAAATCATTAGAG
AACTTTACAGACAGCAATACGAACACTAACAATGATGGTAGTCCCAGTAC
TATCACTAAAAGTCGTAGTCGTAGTTGTGGTTTCATTTCTGATGTGAATT
TCTATAATGAACCTTTGGAAATTTCAATCAATAATAAAGAGGGTGGTGTT
GTACAGGCAACAACAAATGCTCAAGCATCACCTTTGGATGCTTCAAACAC
GAGGATATTCACTGCAAACAGGATAATGCACTGTGATGATTCCAGTTGTT
CTGGAGGTCAAGGTTCTCCATTGGGCAATGCACCAAACATTGAACTACGA
AATATCAATGGTCAAATTCTCATGATGCCCAAACGACCAAGCTTAGATGC
TGGTGATTTGGAAATGCTAATCTACAACAGTCAGCCGTCTTTCATGTTTC
GTGCAGAAACTTCACAAAGTTCAGAATCAGTATTCTGTAGGATATGCCAT
TGTATTGGTGAAGAGAAACTGATAGCACCATGCAAGTGTGCTGGTTCGAC
ACGTTATGTGCATGCTTCATGTTTGGTCACGTGGTTTAAGAAAAGTGTCA
AACACCAATGTGAACTATGCAAGTCAGACGTTAAAATACGGAAAATCAAT
CATCGTATACTACTATGGCGGAAACCGGAAGACAGACCTGTTCCGTTGAT
ATGGTTCACCGTATTCTTTATTGGTTTATTCTTGAACATTATCTCAATCT
ACGTGAACGCTAGCGACTATTGTGAATCGACGGCGTGTTTAATATTCTAC
GTGGTCAACGGGTTTGGTATCGTTCTTGATGCTGCGTTTTTATGGTTTTG
GTTTTTAAAGTGTAAACATTACTGGAAGAAATGGTGTGCGTTGAACCAGG
ACTGGTTTATTGATGATGGGGAGGTGGAAGATGATCAACTGCATGTACGA
TACGTTCAAGGATGTCCGGCTTGAATGGCCGAGACGGAGCTTCTCTTGGC
TTCCTCTTCACCAACTTCGTCCATCCAACAAACAGAGGAATATGTTGTAA
TATCGTCCAATCAGAATCGTgataagaaagaagaaaatagaATACTTGTA
CCATTATCGAAAGTCCCTTTACTGAATGCTTGCTCGTTGAGGAAAGACAA
AGGGACGAACAATATACAGAAATCATTAGAGAACTTTACAGACAGCAATA
CGAACACTAACAATGATGGTAGTCCCAGTACTATCACTAAAAGTCGTAGT
CGTAGTTGTGGTTTCATTTCTGATGTGAATTTCTATAATGAACCTTTGGA
AATTTCAATCAATAATAAAGAGGGTGGTGTTGTACAGGCAACAACAAATG
CTCAAGCATCACCTTTGGATGCTTCAAACACGAGGATATTCACTGCAAAC
AGGATAATGCACTGTGATGATTCCAGTTGTTCTGGAGGTCAAGGTTCTCC
ATTGGGCAATGCACCAAACATTGAACTACGAAATATCAATGGTCAAATTC
TCATGATGCCCAAACGACCAAGCTTAGATGCTGGTGATTTGGAAATGCTA
ATCTACAACAGTCAGCCGTCTTTCATGTTTCGTGCAGAAACTTCACAAAG
TTCAGAATCAGTATTCTGTAGGATATGCCATTGTATTGGTGAAGAGAAAC
TGATAGCACCATGCAAGTGTGCTGGTTCGACACGTTATGTGCATGCTTCA
TGTTTGGTCACGTGGTTTAAGAAAAGTGTCAAACACCAATGTGAACTATG
CAAGTCAGACGTTAAAATACGGAAAATCAATCATCGTATACTACTATGGC
GGAAACCGGAAGACAGACCTGTTCCGTTGATATGGTTCACCGTATTCTTT
ATTGGTTTATTCTTGAACATTATCTCAATCTACGTGAACGCTAGCGACTA
TTGTGAATCGACGGCGTGTTTAATATTCTACGTGGTCAACGGGTTTGGTA
TCGTTCTTGATGCTGCGTTTTTATGGTTTTGGTTTTTAAAGTGTAAACAT
TACTGGAAGAAATGGTGTGCGTTGAACCAGGACTGGTTTATTGATGATGG
GGAGGTGGAAGATGATCAACTGCATGTACGATACGTTCAAGGATGTCCGG
CTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032847XLOC_032847Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051896-exon-scaffold_206-1491911889:65506..66113TCONS_00051896-exon-scaffold_206-1491911889:65506..66113Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1510915933:65506..66113TCONS_00051896-exon-scaffold_206-1510915933:65506..66113Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1575043694:65506..66113TCONS_00051896-exon-scaffold_206-1575043694:65506..66113Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1491911889:68304..68433TCONS_00051896-exon-scaffold_206-1491911889:68304..68433Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1510915933:68304..68433TCONS_00051896-exon-scaffold_206-1510915933:68304..68433Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1575043694:68304..68433TCONS_00051896-exon-scaffold_206-1575043694:68304..68433Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1491911889:68992..69092TCONS_00051896-exon-scaffold_206-1491911889:68992..69092Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1510915933:68992..69092TCONS_00051896-exon-scaffold_206-1510915933:68992..69092Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1575043694:68992..69092TCONS_00051896-exon-scaffold_206-1575043694:68992..69092Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1491911889:70665..70827TCONS_00051896-exon-scaffold_206-1491911889:70665..70827Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1510915933:70665..70827TCONS_00051896-exon-scaffold_206-1510915933:70665..70827Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1575043694:70665..70827TCONS_00051896-exon-scaffold_206-1575043694:70665..70827Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1491911889:71421..72558TCONS_00051896-exon-scaffold_206-1491911889:71421..72558Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1510915933:71421..72558TCONS_00051896-exon-scaffold_206-1510915933:71421..72558Clytia hemisphaericaexon
TCONS_00051896-exon-scaffold_206-1575043694:71421..72558TCONS_00051896-exon-scaffold_206-1575043694:71421..72558Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051896-proteinTCONS_00051896-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_206supercontigscaffold_206:65506..72558 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.38321 4.9449 2.4339 1.89274 13.7263 10.0831 12.1176 12.0962 7.78762 8.649 7.38977 4.95564 13.9176 9.03505 8.44001 10.636 12.0545 12.9916 11.152 11.8128 11.955 9.25375 10.238 11.1847 6.13478 8.43278 20.8091 16.7502 21.0041 18.595
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051896 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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