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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051888 ID=TCONS_00051888|Name=TCONS_00051888|organism=Clytia hemisphaerica|type=transcript|length=1065bp
ATTTCTTGTTTTCAGGGGAACGACCCTGGATGCGGGAGAAAATCGGGAGA
AACTTGTTATAAAGATAAACAATAGCGATTGTTTTGTTAATGAAAATGAT
ATGCataaaaaatagatacatgtttTGCTATTTAAAATGTCGGATCAGGC
TCGTTGTGCCTAGCGCAATAATTATCGCATGAATTTTctttaaacataaa
aacaaacaaaaaattttgtgttaaatTTTCCTAACGAAAAAGTGTTCGAG
AAAAAACGATTTAAGGCATTATCTTCACTTTGAGATATCGGATAGCTTAG
GATCAGAATATACTTAACCACAATAATACGAATATTTTCAGATGAAATAT
TATATTGTGATAAAGCCTAAGAACGACCACAAAAGTTTTAAGATTTCTCT
ATCGGCTGTAAAAGTAATATAAGGTGCGAAAAGCGTATTTCTATATCTTT
GCAGTGTGAAGAAAAAAGGATATGGGTCCTAGAAAGACACCCTATTAATA
TTCATAAATTAATTAAAGTATAGATAGAATCAATAAAAAAGGAATTCCGC
TCTTAGTTTTACAACAATGTCTATAAAGTTTCACAGTTCCAAAAAACTGc
aaaatctatttttaaatcatttctcttgcaataaaaaaaattgttcgtTT
TCATTATGATTTACACATATAAGTCACCAGACTTACACGTACACGAAAAT
CTTTTCCGCCTGCTGATAGGAATAAAAATTGGATTGACACTCTAACCAAG
ATCGTGCTCCATAGCAGAATCATATATTTTGAGAATCATATATTTTCAGA
TTAATTCATGATATCATATTTAAACTCTCGGGGACTGAAAATATTACCCT
ACAACACACCGATAAACGATTCCGTTTAATCCGTTTATAGCATTTCGGAT
TCTCCTTCTTTAGTAGCTTTCAATTTATCAGACAATTTATCACCGGGGTT
TAACAATTGAATAGGTACGATGTTTACACGTGTGCTCTTACGCTCCAAAT
CAGCTTTGTTCGTTCGTGCTAAAAAACATAGTATACAAAACATGAGATAA
ACGAAGATGgggaaa Run BLAST on NCBI transcript from alignment at scaffold_205:337390..338454 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051888 ID=TCONS_00051888|Name=TCONS_00051888|organism=Clytia hemisphaerica|type=transcript|length=1065bp|location=Sequence derived from alignment at scaffold_205:337390..338454 (Clytia hemisphaerica)
tttcccCATCTTCGTTTATCTCATGTTTTGTATACTATGTTTTTTAGCAC
GAACGAACAAAGCTGATTTGGAGCGTAAGAGCACACGTGTAAACATCGTA
CCTATTCAATTGTTAAACCCCGGTGATAAATTGTCTGATAAATTGAAAGC
TACTAAAGAAGGAGAATCCGAAATGCTATAAACGGATTAAACGGAATCGT
TTATCGGTGTGTTGTAGGGTAATATTTTCAGTCCCCGAGAGTTTAAATAT
GATATCATGAATTAATCTGAAAATATATGATTCTCAAAATATATGATTCT
GCTATGGAGCACGATCTTGGTTAGAGTGTCAATCCAATTTTTATTCCTAT
CAGCAGGCGGAAAAGATTTTCGTGTACGTGTAAGTCTGGTGACTTATATG
TGTAAATCATAATGAAAacgaacaattttttttattgcaagagaaatgat
ttaaaaatagattttgCAGTTTTTTGGAACTGTGAAACTTTATAGACATT
GTTGTAAAACTAAGAGCGGAATTCCTTTTTTATTGATTCTATCTATACTT
TAATTAATTTATGAATATTAATAGGGTGTCTTTCTAGGACCCATATCCTT
TTTTCTTCACACTGCAAAGATATAGAAATACGCTTTTCGCACCTTATATT
ACTTTTACAGCCGATAGAGAAATCTTAAAACTTTTGTGGTCGTTCTTAGG
CTTTATCACAATATAATATTTCATCTGAAAATATTCGTATTATTGTGGTT
AAGTATATTCTGATCCTAAGCTATCCGATATCTCAAAGTGAAGATAATGC
CTTAAATCGTTTTTTCTCGAACACTTTTTCGTTAGGAAAatttaacacaa
aattttttgtttgtttttatgtttaaagAAAATTCATGCGATAATTATTG
CGCTAGGCACAACGAGCCTGATCCGACATTTTAAATAGCAaaacatgtat
ctattttttatGCATATCATTTTCATTAACAAAACAATCGCTATTGTTTA
TCTTTATAACAAGTTTCTCCCGATTTTCTCCCGCATCCAGGGTCGTTCCC
CTGAAAACAAGAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051888-exon-scaffold_205-1491911889:337390..338454 | TCONS_00051888-exon-scaffold_205-1491911889:337390..338454 | Clytia hemisphaerica | exon |
| TCONS_00051888-exon-scaffold_205-1510915933:337390..338454 | TCONS_00051888-exon-scaffold_205-1510915933:337390..338454 | Clytia hemisphaerica | exon |
| TCONS_00051888-exon-scaffold_205-1575043694:337390..338454 | TCONS_00051888-exon-scaffold_205-1575043694:337390..338454 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_205 | supercontig | scaffold_205:337390..338454 . |
Blast
The following BLAST results are available for this feature:
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