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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051813 ID=TCONS_00051813|Name=TCONS_00051813|organism=Clytia hemisphaerica|type=transcript|length=4652bp CGAATTTGGACATAATGCACTCCACCGTGCTGTCATCAATGATGAAGAAA GAACAATTCAAAAATTGGTTGCCAACGGGATCGATATAGAAGAGAAAGAT TCATTGGGTTTTACTGCCACACAGTTAGCAATCATACTCGGCAAAGAATA CCTCTTACCATATCTGAATGGAGAAGTTATCGATTTTGAGaCATCTTTAC CAAGTTCACGTTCATCAAGTCTTTCATCTGGAAGTCATCACCGACGTAGC TCGGTTACCTCACAAACATCATCCATCTCAAGTATCTCATCTATAAGAAG TCGAGTACACAGTCTATTACAAAAGCAAAGAGCGCGAACTATTTCAAGTG ATGACTGTTCTGCGGAATATGGAGATACACCTCGGTGTAAAATACAGTAC GAAAATGATCGACGCCGTTTAGAGAGCCTTGGAAGTGAGCCTACGATTTT GAGAACTCGccaagaaaatgttaaaaatacaaGATCGACTTCTCAAAACA GACAGCCACTTATAGTAAAGTTACCAGAAAAtacaaataatgaaaattcT GATGATACTTTGGATAAGGAGCCAAAGAACCGGCAACCGATCAAGATTTC AACATCAAAGTTCAATCTAGacaatttagaaaatgaatCTGATCTTCCAC TAGATATTAACGAAAAGGAGAATAATAGTCAAAGGTTTGTCGAATCAcaa attaaaagcaacattGACATCAAAAATagaactttttcaaattcaaactc GGCTAAAACTCAGTATAAAAATTCAACAGATGCTCAAAATGACATTAACT CAAATCCTATGCTGGCTATAAATGGAATGGAAAATAGAATGATTCGATCT CAAAATGACACTGTTTCAAAATCCACTCTGTATGAGGAAAAAACGAATGA ACAAAGAATGCCGGAGGCAGAAGGTCATCACCAAACCGCAATCGATGATT GTAAAATGACGTTGATTAGCAACGAGAGGGATGACAATTTACTGACTATG GATACCGGGCTAACTTGTTTACAAAGGAGTGGTCTTGATATTACACAATC AGAATGTGTTGACCTTAACAACAATAATATTGTGGAGGAGACGGATTGTC TTCTTCAAACAGAAGTAATTCTTGATGCAAAGAGGGTCAACATATTGTAT GGGTCATCTGACAGTtgtgctgaggctgagaatgaacAGTTTTGTTCGTT ATTGAAGAGTTCCACTCAAGATACAACAAAAACCGCATTTGAATTGGCAT TACAAGCTGCTTGTCCACAAACCGAAGAAAATAGAGGAGAAGGAGATAAA AATAAATGCTGTTACAATAGAAATTATCTGATCAAAAACGTAAACAAAAT ATATCGTGGTCACACGAAGAATTTATTAAAAAGATCCTTATCGTGGCCGT TGGTTTATAGTGAGTGTGTTCACATCATGGATGAGTGGGAAGTCTGGGAT CTAGCTGTCGACGAGAAAGCGCTGAACGATTTCGAAACTTCTGAACAACA AGAAAATCATGTTAATGATAATGAGAGTAATATTAGTAGTAGTGGTACAG AGGAAACCAAAGACATTGAAAGAAGTATCGAACGAAGCACGCGTGTTTCA GTACGACGATCCTTCCACGGTGATTCCAGTCTAGATCTAACTTCCACTAG CCCGGGTCCACAGGAGGATTCAGCTTTAGAGGAAGTCAGTATAACGTATG TTTTTAAGGAGCGAACAAAATCGAATGACAATTTACTAACAAAGAGTTAC GACCATTCTTTGAACTCTACACCGCGCCGTAATAAATTTTCGTTCCGACA ATCATTACGGGAACGTCTCAGTTTGAACTTTaataacaataacgaaaaaC CAAACAGCAGCGGAGAAGAGCGAGAAGAGACAACAACAAAATTAAACATC AAAGACAGAGTATTGTCTCGTTTAACATCAAGGAGTACTTTAACAGCGGA AAACCAAACAAATATGATATCACGATCGCGTTCAATGGAACACTTAAGAC AACATCAGAAAGATGACAATTTTGGTAAAAGTGGTGGTAGGAATTCGTCG TTGAGTGAAGTACAAAGTAAAAGACATTTCAGCGCAACGAGAAGCGATTT AACGTCTGTAGGACTTCACAGTGATGAAGAAGATGATCAAATAAACGTGT TTTTAGATAGCAGTGACGACCATTTAGATTCGACAAAGAATTTTGAGAAT TCTGATCAATTTACTGTTCAGAATAGCAGTACACCTAAGAAGTCAATTGA TAGATCACATTCTTATACtgatataaaaaagattaaGAATAATCACGGAG GGGAGGACATTTATTTGTTATCAGTACCAAACAAAACGTCAAGAAATAAT TCGATAAGTCGTTCAAAATCCCTTGAAAACGTACATCATCAAAAAATGAT GACAACTGAACCTGAAGATAGATCTACTTCACCGAACCGTTCGCCCGTTC TTAGGCGACCGAAAGCGAGAACTTATTCAGACTCGTTGAAATTAGACAGT GGGTATTTTTCACCCGACGATTTAAGAAAGGACTCTGAAGGAAGCACTAC AACTGAGACGAAAACTCCGTCGTATACGATTACTTTTACACCCGAAAAAA CGAACCCTGATGATCTACAACATACAAGTAACCATACAACGCCTTCAATA GCTCAAGGTCTTGCCTCGATGATTCCACTTGGGGTAGGCGAGACAATGCT GGATCGAGATAACACCGATAATATAATACATAATGTTGAGTCGGTTCACT CTGTGGAGGAGCACGGGACTTTTAATTTGAAGGTAGAAGAGCACCAACAT GATTTTGAGCTCTCCTTCACAGAGGAGGAAGAGTACGTTGACATTGATTT TGTTTATGAAGACGAAGAACCTACGATGGAGAGTCGTGAAGAACGTGAAG GGGATTCTATTGAAGAAGAACATTCAGATGGAGAGTTGATAAATGACGTC ATAGATGATCATTCACATAATGCTGAAAATGAGGAGGATGAAGGCTACAA AAACTTCGAGAAAGGACTAAGAGAAGGTCAAGAAGCAATCGACGAAACTG ATTGCCCTAAGTATCGATTGTTGAATCCAAACTTGACACCCTTACAAATT CGAGTCCATTCTCCTAACGGGAGCTTAGATGAAGATGGCTTCCAAATCAT GCATTCTACAGACCCGAATATCAATCATGAAGACCCATCTTTTGAAAgtg ttgaagaagaaaatgaatcaCCTGGTTCATCATCACCTGAGCGTCGACGT ACTTTATCCAACGAGTGTCAATCGCCGTTCGAAGACAGTATACAATCGTT CGAAGCACATGAAAGGGAATGCGCCAGCACAGCACCAGGTACACCAGTAG ACATATCATTTGGTGATGATTTTGACGTCATAGAAGATGGAAATGATCGA CGAATGACGTTGGCCTTGTTGGATTATCTCCCACCAATCAACGAAGATGT CGAAGAAGCAAACTCTAATTGCGGTGCAAGCGTGGATGAAGGAGATGAAG ATCTGCCGCTGGCTATCACCGCTCCTGAAAATGATGAGcacAAGCGGACG TTATCAGCAGAGAATTTACGACTTCACAATCAAGAGAATGGACaagaaac agtaaagaaaaccATTTTGGAGGATTTTTTGAGTACTGGAGCAAGTTCAT CCGATCCAGTTTTTAAAGACGAAATCAACAATAATGAAGACAACACAAGC GAAAAAGAACTGGCGCTTGATACACCAGACAGCACAATAACCCGACCAAT TAAAGATGCAACATCAGACGAAAACCAAACTTTAAAGTCAGGCAGCGATG ATAAGCAAAAAGGCGACGTCATAATTGTTGAAGAGCAGATAGTCGTTACA GAGGAAGTGATTCATTTGGAAGGTCGCCCACCATCACCAGTACCAGACAT CTTGGTTGAGGAAGTCCAAATATCGGACGAGAAGGATGATGAAGATGATA ACACGACTTCAATTCTAAAGCAACAAAATGCTGATTTCACAAGCCGTTAT ACATTGACTGATGTTTCAGATTTAGATAGCGACGAAGAGCTAGATGATCT AGNGCAAGTAAAATATCTTGGTATTTATAAAGAGCTACAAAATGTTCATT CAATCATAATGGATAATTTTTAGTCAGAGAAAAATTTGACTTTCGGGTAG TGGTGATCTAAAAGTATTTTCTTCGCAAAGAAGTTTCTATGAAGAAACTT TAAGAAGAAACAATACCGAcaaattcattcaaaaaattcccaaaaacttt ttcatctaCAGGTTGCTTGCGTTTCAATTGCGTCAAatcttttgtttgca atgtctcCAAGAGACTTGCGCACGTGCAATAAAACAAATATCCTTCATCC GCCATCTTGCTTGCTAGTTCGAATTGATGATTATCCATTAATTCTTCGTT GACAACAACAATAAGTGGTTTCCATAGTGATAAGGTTTCTAAAATACTTC CTGCGCCTGCATGACTGATAACGAGGCTAGCCTCATTCATATCACCAGCA ATTGAATctttataatcaaaacattcgattttcaagcatttatgattttc ttttgaGAGTTCAAActgaccacgccctttttgtaaGGTTAAATGGGTAT ACCCTTTTTCTACAAAATGATCCAATACCTTTGTTGATGTGACTGCATTG AG Run BLAST on NCBI transcript from alignment at scaffold_205:225503..241818+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051813 ID=TCONS_00051813|Name=TCONS_00051813|organism=Clytia hemisphaerica|type=transcript|length=16316bp|location=Sequence derived from alignment at scaffold_205:225503..241818+ (Clytia hemisphaerica) CGAATTTGGACATAATGCACTCCACCGTGCTGTCATCAATGATGAAGAAA
GAACAATTCAAAAGTAAGCTTGCTTTTTTATTACCGGACACTTATGATTT
GGAAAACCTCATATGAAACAACCCGAACTCTTTATGTATCATGTTTTGGG
TACCACTTGATGCCAAAAGATGTTAATTAGACGGCCGAACCTGAAATCTA
AAGGTTACATAAAATGTTAAATTTGTCTTTTGCTACTAAAGTTGAccctc
gcttattcgaactcgGACGAGGGATCTTATatgttcgaataacagagaga
aCCGAATTACAGAAAGTGTTTTAAGAGTTTCTCCCTGACGGGAACAAAAA
ATGTTCCAATTatggaaagattcgaataatagaagttcgaataagcgaga
ttCGAGTGTAATATTGGCGAGATGCCTTCTGGTAGAGAGTACAGAATAAT
TTTCCTTGATGTTATCTCATATATGGCTATTTTAGATTGGTTGCCAACGG
GATCGATATAGAAGAGAAAGATTCATTGGGTTTTACTGCCACACAGTTAG
CAATCATACTCGGCAAAGAATACCTCTTACCATATCTGAATGGAGAAGTT
ATCGATTTTGAGGTAAGACTTGAATTTAACGAAATTTTATCGTTATAccg
tttttaaagtttttacatAGGAACCTTTTTACAACTACATTCTTTTATTC
AAGTAAAGCTGTATTATCACGTTCACTGCGgaacccttttcaaaaattga
ccatTTAACCTCTTAGAATTTcatcgaaagtttgactttcagaggCTCAT
GTTGCATCAATATTTTTGCttacaaattcaaaaaatgcgATAAAAAGAAT
TATGATCAAATTGACGATTGAGAAGATCAAAAACTGCTAAAGACCCAAGT
ACACTGTATATAATTCAATTTATAGAACaatgtctttttctttcatttag
aCATCTTTACCAAGTTCACGTTCATCAAGTCTTTCATCTGGAAGTCATCA
CCGACGTAGCTCGGTTACCTCACAAACATCATCCATCTCAAGTATCTCAT
CTATAAGAAGTCGAGTACACAGTCTATTACAAAAGCAAAGAGCGCGAACT
ATTTCAAGTGATGACTGTTCTGCGGAATATGGAGATACACCTCGGTGTAA
AATACAGTACGAAAATGATCGACGCCGTTTAGAGAGCCTTGGAAGTGAGC
CTACGATTTTGAGAACTCGccaagaaaatgttaaaaatacaaGATCGACT
TCTCAAAACAGACAGCCACTTATAGTAAAGTTACCAGAAAAtacaaataa
tgaaaattcTGATGATACTTTGGATAAGGAGCCAAAGAACCGGCAACCGA
TCAAGATTTCAACATCAAAGTTCAATCTAGacaatttagaaaatgaatCT
GATCTTCCACTAGATATTAACGAAAAGGAGAATAATAGTCAAAGGTTTGT
CGAATCAcaaattaaaagcaacattGACATCAAAAATagaactttttcaa
attcaaactcGGCTAAAACTCAGTATAAAAATTCAACAGATGCTCAAAAT
GACATTAACTCAAATCCTATGCTGGCTATAAATGGAATGGAAAATAGAAT
GATTCGATCTCAAAATGACACTGTTTCAAAATCCACTCTGTATGAGGAAA
AAACGAATGAACAAAGAATGCCGGAGGCAGAAGGTCATCACCAAACCGCA
ATCGATGATTGTAAAATGACGTTGATTAGCAACGAGAGGGATGACAATTT
ACTGACTATGGATACCGGGCTAACTTGTTTACAAAGGAGTGGTCTTGATA
TTACACAATCAGAATGTGTTGACCTTAACAACAATAATATTGTGGAGGAG
ACGGATTGTCTTCTTCAAACAGAAGTAATTCTTGATGCAAAGAGGGTCAA
CATATTGTATGGGTCATCTGACAGTtgtgctgaggctgagaatgaacAGT
TTTGTTCGTTATTGAAGAGTTCCACTCAAGGTAAGTTGACTTTTAGAGAA
AAAATGTAGAAGAAAAATTTCGCGACTGTTTTATATAGCCAGTCAAGTTA
GAAACAATGTCGTAGCTTTGCTTTGCTTTGTTTAGACCGCATTGTTGTAT
CATAAACTACTGCATAATACTGAATTCTAAACTCATAATGGGGCTAACAA
GTATGAAAGTTTTCTTGAAATACAGAATGTGTCTAGAATCATATGGGAGT
AGTATTATTTTTCTAACAATGAGGTTATATAATCATGTGTCACTGATAAA
CAAAGTGCCTTCCTtctgtttcaaaataaaaccagGGAAAATCCGATTTC
CTAAACAAATACAAAATAGATTAAGTAAATCAGTGAAAGAAACTtccaaa
aaagaaacaaaatagaACCAAAGAATATCCTCAATTAGATGACACGAAGC
CCACGAAGAGAGAAAAGCCATCATGTTTAAATAGATTTGTTGACTATAAA
TACAAGAGATCCATTTTTGATCTTAAGTAACTAAGTATATTGTCAATACA
TAGATTAGAAGGAAAAACTGTTGATTAAACGAGTTGGCTAGGTCATCTGA
TTTTGATATTTACTTGATGGTTGTTGGTAGAAGGATGTGGCGATAAGCTG
ATGAATGAACATTAGTGCAGTGAATAAGAAATTCAATGTCCATTTTGGTT
ATCTGTTACACGAATGTCAGGCGTTGAATTTGAGGCTTGTGATGGTTCGG
GAAAGATGTTTTGATTAGATTCCTTGTGTTTTGTATTATGTATGTAAGAC
TTTGAGGATTATATTGAGAATTTGGATGTCTTTTCTGGTGTTCCTGGAAA
TCACCGATGAAAGTTGTTTGTTGGACACAAAAACGGTTTTTGTGTCGTCA
TAGTCAGTTTTCTGTTACAAAGAGACGGTTTCCAAATCTTTAACAATAGT
TAACAGAGACATTAACTACCTGTCATAATCTTTTGGAATCTCAAGGTAAT
TAACGTCATTAAAGACTACTTATAGAAAGAGACAGTGATGGAAATTTTCC
TCACTTTTTTTGTGAGCTCGTTATAATGAGGAAATAGCGTGCTGTTGATA
TCTTTTTGGTTGTTATGCACATTGAAAACACACAAGCAGCCAGAGTAGAA
AATCAAGTAATTAGTCGAAGTTTAGTGACTTTGTTGATTGGACTAGTTAG
TTGGTAGTTTGATTGTGTAGAACTAGATCATCGAACTTTTAATCAAATAG
TCTTCAGTAAATTCAAAGATTGTACAATTGAAATGCAAATATTTAGTTCG
TACTTCTTTCACAAAACATTCTTTAGAAGTAATGCTGTTAAGCTTAATTT
AAAGTGCTTCAAAGGAGGACTTTAACACAAAGACTGCGAAGACTGTCTTT
CCAAGTTAGCTGCAATTAAAATCAGATAGAGGAAAAGGCAGTACCTCGTA
TAACTTCAAGACTATTCTTCGCTTTAACGAGCTTATAAATTCTCATCATT
TATCTAAAGACTCGTGAGCATAATTCATAACAAAAGCATGGATAGATAAG
ATCTTGCTGCGAAAATGTTAAAGGAGAAAATCAATCTTTAAAAGTTGCTG
TAGTGACAATTAGTAGATGTCCTTGGTAACAGATTCTGGGTTAGTGAAGT
CCTTTATTATAAAGCTAGGGTGTGCGACAATACAGACTGAACCAGCTTCT
AAGAGGCTACACATAAGGAAATTACGAATGACATGAAAATCAAGAGGATA
TGAGAAAAATGTTCGCTTTCCTCACTCTCTGTCTAAAATGGTAGTGAGGT
GTGTAATATTTGTTATATGATGTTTATTGCTCTTTTTGACGGAGCTTAAT
TTGAACATTTGCGAGAACCAAATAGtactttgattttcaaatttttccag
gGATATAAGCGTGTTGACTATACAAATTTgtgaaccattttcaaaagagg
ACAATAGATTTTAGAAGTTTTCAAAATGCTTCGCTTCGATCATGTCGTAT
TCTAGCTGTCGAtcaagatattaaattttaaaGGAGTTATCTCTAAAAGA
TATTTTGAGGTTGACCTATGACCTTTCAAAGCTCTTTTATCTCATAATAT
ATTATTGTTGATGTTTTTCATGAAAACGTTGTTAGTTAAAGTAAAGACAG
AATTTAACACATTATATGTAATCTGGCTGTCAGACTTGGATCTTAAATAA
ATATGTGATGCAGGTATGAGGTGAATTTGCAAGAATTAAaggttttttag
attttttttggtgattAAATCAGAGATGTTCGAAAAAGATTTATTCTAGA
AAACGGTGATCACATTCGACAAACAAAATGGACAAGCACATACTAAAATG
GAACCTAAAATCGTGCGAAAGGCATCAAATTCTGTAATAGAGAAGAGCTA
ACAGCCTAAGTGTACTTTGACCCATACGTCACATGATTTTACGTGGGCTT
TACGTGCACCTAGTTTCTTTGACTTCGTTAATACGTACACAAGATATTGA
TAATTCAATAAAAATATGACATTTTAATGGTGTCGGGACTGTGTTTGACG
ATTGACGCCTTTTATTTCTCAAAGTGCTCGAAAACATGATCCTGTCAGAC
GTTTGGAATGATATGATTTAGTTTGGAGTTAAATTTGATGGATAGACATA
TTGACCTTTGAGTAAGGCGTGTTTATACTATTAAAACATGAGTGGAGTAG
GAGAAATAGTTCAAATTACACCTTCCATTTTATTCATTTAAAAGCTGCTT
TTGTATGCTTTTGATTGACTGAATCTTTGTTTTGTAGTGTTGGTTTGCCT
GCCATTGCAGATATGATGTTGTACTGGTTGTTTCAGAGAGTGTAGTTGAA
TGAAGTAAGACTAACGGTAAAACACTGTCTTTTGTGATAACTTGTTTAAA
ACGTATTCTTCATTAGAGAAAGACCTTTCTACTAGAGTCGCTTACGTAAA
TCATGCTTCTGGTCTTTTTCAATCGGAGGCCAATTCGTTCCGAACTAATA
AGTATGAAAATCTTACCCTCGAAAGTTTTGGAAGAATGGACTTTGAGATT
GTGTGTTTGGCAGTCTTGTGGTGGTCctgaattgaaagaaaataaaacgT
TTTGTCAATATCTACTTAGACACGCCTGTAGGTATTCACGGATTTGATAT
CAGAGAAAGGTTAAATCGATGGATAATAATTGACCAAAATCAAATTGACC
TCTCTAAACTGAGGAAACTTAAATGAGCCTGGGAATATATAAGAAAAGAA
TAACAAGGGATGATCGCTAGATTAAATTCTTCACCAGTTTCAACGTCTCC
AAGGTTTGACTTTTGGCATCTCTTTGAAATCTCTCAATTGCAATTAATCT
GAAACGTAGAAACATAATTGACattaaaataaataacaaattttCTCCTT
AAATTTACATATGCCTAATAACAGGTTATTAGTGAGAAGTAAGGAGGAAA
CTCGCCTTTAATTATACTGTAACTTAGCTGTTAAATGATGTGAAATTACC
TGTGTGAATCTGAAACTCCCAGAAGAGGGAATAGCATTTTTCGTTATCAG
CTAAAATGAGAAAACttgattgtttgttttttaccGAAGAGAGATGCAAA
AGGAACGAAGAATTTTTGACaggagaaaaggaaaatatttacAGTTAATT
TCTGAACCAAATCTAGCTTTTCCAGAGGGGACTGTAAATAGCTTTGAAAG
AAATATTGTAAATAAAATACTTTTGGAGGGttctcaggtgagttaaggca
agttccaaacatattttgcgtgacgcgcaccgcttcccattgttccttaa
ctttcgtatatagctcaaaagaagcgtattaaggagaggatttcggaaaa
tgctgggccaaaaatttaaattaagccaatctcaagatatcggccaaaaa
ctgatttttacgtaaggaaatacgtcgaaaaaacacgtcaaaaagacaag
ttaaatgacgtcatatttaaaaacagcgataactttgATTACATTATTAC
TACAATTTACactaaattttgactggagacgttgattgttaattctgaaa
tattgcatgaaaaaaatttgagtaaatgacgtcatctaaaaattttgaaa
atttctctacaaatattttagaatcgttaatctACGTCTCCAGTCGAAAT
TTGGTGTTATTTGTGGCAATGTaatcgaagttatcgctgtttttaaatat
gacgtcatttaaattgtctttttgacgtgttttttcgacgtatttcctaa
cgtaaaaatcagtttttggccgatatcttgagattggcttaatttaaatt
ttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNtttaatacgcttcttttgagctatatacgaaagttaaggaacaatg
ggaagcggtgcgcgtcacgcaaaatatgtttggaacttgccttaactcac
ctgagttTTGAGCTGACAAAGAAAGGCAAAGAGGTTATTGAGTTTGGTTT
TAGTTTGTGACAAGTCGTGTTATTTCATAGGTTTCCGAATGTGTGTTCTG
TTCAGAAGTAAAAATGTTCACACCTTCCGCCGAAAGTGtggaatattttt
ctaaaattcttGAATCTTTTGATAGGGTGTTCTATGTAAAAGATGTGTTG
TGAGTAAGTAATCtggcttgttttgatttttgaaaggtTATAACATGCTA
TTTCGTTTGTACTCCGCTGTACTCTGCTGTTCCTATTTGAAGTCTTTCGT
CTATTTCAGTATATGTTTTCAGAATAGTTTCTacgaggcccccagcggtt
tgcgtgatggcgtgattgggacttttttcttgcgtgatggcgtgattaga
gatttttttggcgtgatggcgtgatcaagattttggcgtgatgcataata
gggcaaaaatttgaggcgtgatacgtgatttgggctatttttcgctattt
tatGCGTTTtatttagcgattttcgtgatgcgtggtggagaaaatctttt
tgcgtgatggcgtgattagggcattgagtttcaagcccgaagggctagag
gtcaatctctaacctttctcaggcaagaaaaattgaagccttaaaatatg
cgccgtatttttgatgacgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaggcgg
gtcgctcaaggccgcgcaactttggtaggatttgttggcttcaaatccta
ccaaggagattgacctctagccttcggcttgaaactcaatggattagggg
tgccgctgggggggggcctcTTCTACAaccccgtgtcacagacccggctG
GACCCCCAAGCACCGGAAAATCTAGCTGTttcgtccccagtgggaaaGAT
CACAGCTTCGCTTGAAGATTGACttaaatttcatccccatttgaaattca
atgttacAAATTTCACTCTAAAACCATCCACACTGGATTTTTTGAGCTGG
cgacaaaaaaaattctatcctgattgggattttgataaattttcatcCCT
ACTGGGGGAAAAATCCATGGGGATGCGAGACAGGGTTgtacatgtttctt
ttttataagaacatccaaaattttttaagccttcggatgttcttaacttt
ttgcggtttaagcctaaaaatgttcttaacatattcttattttgaccatt
ttgtgagcatttttggccattttcctaagaaattgggtgtttttgagtcc
acaaagccttaaaatgttcttaattagttcttaacattttggccatcgaa
accttatgttcttatatagtttgttcttataaataaatgtgTATTTTATA
GAGCAAagcttttttgagaaattattaAAATTGGAAATACAGTACCATGa
actactacacgttttttatgagaacaaactataagaacataaggctcgat
ggctaaaatattaagttAAGAAGTTTATTTCCTGTATCCACACTTACTGT
ACTAGCTGGAtctcaatttttaaaataattactGGATCTTGGTTGTCCGA
CATCCGTGAtttgaattctgaaaaaatcaaagtaataatcaaatttccaa
aatatacCTAGACTTTaagaaaatgctaaaattagaaaatgttaAATATT
CATGATGAGAATAATATACTTGGGATACTGACCATCTCGTGTATGTAATT
GTATAACTGCTGACAGTCAGTAGtgtatttttaaggtttttgaaaatagc
tgtaaaaactttgataaaaatGGGATATTATGGTGTTTTTAATTGATGCT
TTTCAGAGAATTATAATCAGGTATATGCTGTGTATATAATGTTGTGAGCA
GCATATAGTTAAAAGAGAGGGTTGCTATTAAAAGCTTACTTTACACGAAA
TTGCTTGATGAATTATCATAATATCGTTATGATACCTCTTAatttaaaat
taagaacattagGAGTATTACAAACACTAAGAACAGATTGATTCAAAACG
ATAGCCCATTGGCTTTCTCGACATTTTGTCCggtattttggtaaaattta
gcCAAATACACATATCCAGTTTGCAAGTAGAACTATTTTCCTTTAAGAGG
GGCTTAAAATATGGTACTAGAATAAAGTTATGGCATACATTTCTTATAAC
AGAAATATTGCATTTGTTCTTATAGATACAACAAAAACCGCATTTGAATT
GGCATTACAAGCTGCTTGTCCACAAACCGAAGAAAATAGAGGAGAAGGAG
ATAAAAATAAATGCTGTTACAATAGAAATTATCTGATCAAAAACGTAAAC
AAAATATATCGTGGTCACACGAAGAATTTATTAAAAAGATCCTTATCGTG
GCCGTTGGTTTATAGTGAGTGTGTTCACATCATGGATGAGTGGGAAGTCT
GGGATCTAGCTGTCGACGAGAAAGCGCTGAACGATTTCGAAACTTCTGAA
CAACAAGAAAATCATGTTAATGATAATGAGAGTAATATTAGTAGTAGTGG
TACAGAGGAAACCAAAGACATTGAAAGAAGTATCGAACGAAGCACGCGTG
TTTCAGTACGACGATCCTTCCACGGTGATTCCAGTCTAGATCTAACTTCC
ACTAGCCCGGGTCCACAGGAGGATTCAGCTTTAGAGGAAGTCAGTATAAC
GTATGTTTTTAAGGAGCGAACAAAATCGAATGACAATTTACTAACAAAGA
GTTACGACCATTCTTTGAACTCTACACCGCGCCGTAATAAATTTTCGTTC
CGACAATCATTACGGGAACGTCTCAGTTTGAACTTTaataacaataacga
aaaaCCAAACAGCAGCGGAGAAGAGCGAGAAGAGACAACAACAAAATTAA
ACATCAAAGACAGAGTATTGTCTCGTTTAACATCAAGGAGTACTTTAACA
GCGGAAAACCAAACAAATATGATATCACGATCGCGTTCAATGGAACACTT
AAGACAACATCAGAAAGATGACAATTTTGGTAAAAGTGGTGGTAGGAATT
CGTCGTTGAGTGAAGTACAAAGTAAAAGACATTTCAGCGCAACGAGAAGC
GATTTAACGTCTGTAGGACTTCACAGTGATGAAGAAGATGATCAAATAAA
CGTGTTTTTAGATAGCAGTGACGACCATTTAGATTCGACAAAGAATTTTG
AGAATTCTGATCAATTTACTGTTCAGAATAGCAGTACACCTAAGAAGTCA
ATTGATAGATCACATTCTTATACtgatataaaaaagattaaGAATAATCA
CGGAGGGGAGGACATTTATTTGTTATCAGTACCAAACAAAACGTCAAGAA
ATAATTCGATAAGTCGTTCAAAATCCCTTGAAAACGTACATCATCAAAAA
ATGATGACAACTGAACCTGAAGATAGATCTACTTCACCGAACCGTTCGCC
CGTTCTTAGGCGACCGAAAGCGAGAACTTATTCAGACTCGTTGAAATTAG
ACAGTGGGTATTTTTCACCCGACGATTTAAGAAAGGACTCTGAAGGAAGC
ACTACAACTGAGACGAAAACTCCGTCGTATACGATTACTTTTACACCCGA
AAAAACGAACCCTGATGATCTACAACATACAAGTAACCATACAACGCCTT
CAATAGCTCAAGGTCTTGCCTCGATGATTCCACTTGGGGTAGGCGAGACA
ATGCTGGATCGAGATAACACCGATAATATAATACATAATGTTGAGTCGGT
TCACTCTGTGGAGGAGCACGGGACTTTTAATTTGAAGGTAGAAGAGCACC
AACATGATTTTGAGCTCTCCTTCACAGAGGAGGAAGAGTACGTTGACATT
GATTTTGTTTATGAAGACGAAGAACCTACGATGGAGAGTCGTGAAGAACG
TGAAGGGGATTCTATTGAAGAAGAACATTCAGATGGAGAGTTGATAAATG
ACGTCATAGATGATCATTCACATAATGCTGAAAATGAGGAGGATGAAGGC
TACAAAAACTTCGAGAAAGGACTAAGAGAAGGTCAAGAAGCAATCGACGA
AACTGATTGCCCTAAGTATCGATTGTTGAATCCAAACTTGACACCCTTAC
AAATTCGAGTCCATTCTCCTAACGGGAGCTTAGATGAAGATGGCTTCCAA
ATCATGCATTCTACAGACCCGAATATCAATCATGAAGACCCATCTTTTGA
AAgtgttgaagaagaaaatgaatcaCCTGGTTCATCATCACCTGAGCGTC
GACGTACTTTATCCAACGAGTGTCAATCGCCGTTCGAAGACAGTATACAA
TCGTTCGAAGCACATGAAAGGGAATGCGCCAGCACAGCACCAGGTAAAAA
CAGCTTTAAGTTCAAATTTAGATGGACGACGATTATTACTGAATTCGAAG
TAAACGCTCATTTCATTCAACGAAACATTTACTAAAGATTGTAAGAAATT
GGCTTAATTTCAAGTCTTTTTTGCATGCTTGTAgctaaatttcataaaaa
gttgGATTCAAATCTTTCAAGGAAGCAATACTAGTTTGGGTCCCAACTTA
GGATATTTTGTTAGATTTCGTCGGTATTTTCAAAGACCcagtcaaaaatc
gaaaatcggaAATCGAAAGCCAACTTTCATACCATATATCATTTCAAATG
TTTAGGTACACCAGTAGACATATCATTTGGTGATGATTTTGACGTCATAG
AAGATGGAAATGATCGACGAATGACGTTGGCCTTGTTGGATTATCTCCCA
CCAATCAACGAAGATGTCGAAGAAGCAAACTCTAATTGTAAGTAGTTTGG
TATTCTGGATTTCAAATTTCATGATTTGAAGGTATGCCTTCATTTTCAAC
CCTCCCAAACAGACAAGCATtttaaacaaggttttttttGTTGGTCATTA
TATTTTAATGTCTTATCGACATTTTATAGAACCTGCAGAACCAATAGTCC
CCACTCTCAACTCTGAACCCTTAAGTATTTCTTGTTGAGCAATCTTTAAG
TCTTTATTCATCGTTAGGAAGGTTTAAACAAGGTCATATAGataaactaa
aaatcaaaagattataTAATAGTTCATTGAATTATACTATCTTACAAATT
GTGGTCAATATTTTAAGAAGTGTTAAAGAGAGCCCATTCTAGACATCTAT
CTATAGAGATTTACGGGGAGATTTATGACCTTCATTGAGATCTATTTTTA
TCTTATAGCAGAGATAAAGTAATATAAAGTACATTACAAATTCTCAGCCT
GTACTCAATCTCAAAAATCTTTGTCTTGAAGGGAGATTATTCTCACTTat
gaatttccaaaaaaaacttaacaTTAAAAAAACATCCGTATTTTAGAGTA
GTGGTTAATTTACAATAAAACCCGAAAACAACTCGCTCCAAACTAGTTGA
ATACCTTAGTAACGAGTATAACAACTAAACATGGGATCAAATAAGCATAA
AATATGGATGAATATGGCTTCTCCTACACTATATTAATTACAATGAATCC
TTGCGGTTTATCAAACAAAGAATTTAAAGAATAAATCCgattgaaatttt
gctgaaaaattgagaagaatactattttgattaaaaatgttcactcaaaa
caaatttttccaaaattttaccaagtgttaaaataataatctaAGTTTAA
AATTGGACAATGGAAAGCTTTCACATACCTATCGTCTTTCCGCGAACATT
GTCATTTCAACCGTTTAATTTCTTCGCAGGCGGTGCAAGCGTGGATGAAG
GAGATGAAGATCTGCCGCTGGCTATCACCGCTCCTGAAAATGATGAGGTA
AGACTTTGGACTTTTGCAAATAATATACAGAGATCACTTAGTATGAGGAT
CTAGCTGTGGTATCAGATTCTAACCGCCAGTGTATTTTctaagtaatttc
tgaaatctgaggcttagGATTactcttaatttgttcttaggttttggcca
attctaagcctcgtgttcttataaaattgttcttatattaaaaaaggtGT
ATACTGAGTGTACTTATGCTGTGGCAGTGCCATTGTAAGCTCCATTGACG
ACTTTCTGATCATATTGAGTCTTAGTTACTGATCCATAGTGTGAATAGGG
CTTTAAAATACATCCTCTTTGTAAAACTTACCTGAGGTAAGCGCTTGATT
CAAAGTCTGTTCAGGGCTTTAAGATCATCCTTTTTGCATAACAATGCCAA
TGTTTATATTCTAGTGAATGGTTTTAAAACCGGATCTATTTTCTGTAGGT
TTTTTGCATAATACtagaataaaagaaaatcaaacaaatttgAGAGATTC
ATAGAAAGTTTCAAAACTCACAAACTTCTACAAAAGTTTTGTCTTTCAGA
AAATTGGCTTAAATAATTCGAGGTCAAAAATAGAGAAATATTACTTCATC
TTATCTATATTTTGAAGTGTGAAATTCGTCCTGAATTGGAATATATTgga
gttttgattttgaaagaatAACAGAGAGTATTATGGTTACTAAATCTCTT
CAGTCGCTCGTCTTTGTGAGCTCTTTTACTCTGTTGGagcaaattgaaaa
taaatcaatCTCTCTTTCATGTGAAGGCTTAATCTATCTGTGTGTAGGGG
TTTTAACAAGTTCTCATGTATAAATGATATAGTGACACTATACAGTGTTT
TAATTAATAGTGGTGATATGATACTAGGAccagtaaaaaaagaaataact
tTCGGAGCAAAACAACAACAGAAATATTTTATATGACACTATAAAAAATA
TTGGATGTTGGACGAAAAAACTTCTGAATATTATTTTGTTCACAACACTC
AAAATGGTTTGATGAAGTGAAGTTTAGAGGAAGAAGAGTTTGAATGATTT
gagatttgtaaaaaaatgttcaaGAGAATCAAGAAACTTCAACTGGCTTC
TTGCGTTCCAAAGAGGAGcaggaaaaataaaaagttaaaggtGAATAAAG
AGTAAATTCTCAAAATGGGAAATTTTTCATGACCTTCGCATTTTAAAGAT
GATGGGTTGANGAAATTTTCAAAACGGGAAATTTTTAATGACCTTCGCCT
TGCAAGATGATgggttgaaatttgaaatttcgaaaatactataaatctaa
aatactaataaataaaataaaattggcAAATGCTGGCTTGGCTGgcttta
tttattgattgattttcactgaaatatatcttattttctttttagcacAA
GCGGACGTTATCAGCAGAGAATTTACGACTTCACAATCAAGAGAATGGAC
aagaaacagtaaagaaaaccATTTTGGAGGATTTTTTGAGTACTGGAGCA
AGTTCATCCGATCCAGTTTTTAAAGACGAAATCAACAATAATGAAGGtaa
tatttttcttcatttttctttaatttcttcttcactttttggGAAAACTT
TACCCAACACTTACTGACACTCGACTCagcattgtttcaatgtttattta
aTACATGGATGTCATGTACGTTGGATGGGCATTACTTTAACATTTTATGT
CAGATAAGTAAGGATTAAGGAAAAAACATCTTCCTTTCTTATCTGCTAAT
CTTCCGTGTTTCACTAGAACCAGGAACTTCTTAGATATGAAAAAATCACG
GACTTCAGTTCCCGTTTCTCTCTGATATTTATCATGATTTATATCAAATG
TTTATTGAGCTGAAACCTCAACGAAAGATAAGAAATCTAACCATGGGCAT
TACTTCTGCATGCTTAGACATGAGATGAGattcatttttttatcaaaata
atcgaGATACACTCAATGAAAGGCATCAAAATGTTGTCAAGGATCACTTC
AAATAATTTGATTTGCCACTCCTAGCTCAAAATAATCTGTGGtattaaag
aaaataataagaaaaatatgGTGCTAAGGGTCGCAAGTAAAATATCTTGG
TATTTATAAAGAGCTACAAAATGTTCATTCAATCATAATGGATAATTTTT
AGTCAGAGAAAAATTTGACTTTCGGGTAGTGGTGATCTAAAAGTATTTTC
TTCGCAAAGAAGTTTCTATGAAGAAACTTTAAGAAGAAACAATACCGAca
aattcattcaaaaaattcccaaaaactttttcatctaCAGGTTGCTTGCG
TTTCAATTGCGTCAAatcttttgtttgcaatgtctcCAAGAGACTTGCGC
ACGTGCAATAAAACAAATATCCTTCATCCGCCATCTTGCTTGCTAGTTCG
AATTGATGATTATCCATTAATTCTTCGTTGACAACAACAATAAGTGGTTT
CCATAGTGATAAGGTTTCTAAAATACTTCCTGCGCCTGCATGACTGATAA
CGAGGCTAGCCTCATTCATATCACCAGCAATTGAATctttataatcaaaa
cattcgattttcaagcatttatgattttcttttgaGAGTTCAAActgacc
acgccctttttgtaaGGTTAAATGGGTATACCCTTTTTCTACAAAATGAT
CCAATACCTTTGTTGATGTGACTGCATTGAGAAGCGAATCAAATTCGGTT
GTCCCAACCGtaacaaatatatttttcattttattctattctttttttgt
ttttactgaaaaataaaaagatgaaaatattaGTTAGCGATGTTAGAGTT
tgcaaaagttgaaaaaataacctaacgCAAATGAACTCTTtctattcttt
ttttaaatattcatcattccatatcaaaactttatttcaTATCTTTTATT
CAGACAACACAAGCGAAAAAGAACTGGCGCTTGATACACCAGACAGCACA
ATAACCCGACCAATTAAAGATGCAACATCAGACGAAAACCAAACTTTAAA
GTCAGGCAGCGATGATAAGCAAAAAGGCGACGTCATAATTGTTGAAGAGC
AGATAGTCGTTACAGAGGAAGTGATTCATTTGGAAGGTCGCCCACCATCA
CCAGTACCAGACATCTTGGTTGAGGAAGTCCAAATATCGGACGAGAAGGA
TGATGAAGATGATAACACGACTTCAATTCTAAAGCAACAAAATGCTGATT
TCACAAGCCGTTATACATTGACTGATGTTTCAGATTTAGATAGCGACGAA
GAGCTAGATGATCTAGNGCAAGTAAAATATCTTGGTATTTATAAAGAGCT
ACAAAATGTTCATTCAATCATAATGGATAATTTTTAGTCAGAGAAAAATT
TGACTTTCGGGTAGTGGTGATCTAAAAGTATTTTCTTCGCAAAGAAGTTT
CTATGAAGAAACTTTAAGAAGAAACAATACCGAcaaattcattcaaaaaa
ttcccaaaaactttttcatctaCAGGTTGCTTGCGTTTCAATTGCGTCAA
atcttttgtttgcaatgtctcCAAGAGACTTGCGCACGTGCAATAAAACA
AATATCCTTCATCCGCCATCTTGCTTGCTAGTTCGAATTGATGATTATCC
ATTAATTCTTCGTTGACAACAACAATAAGTGGTTTCCATAGTGATAAGGT
TTCTAAAATACTTCCTGCGCCTGCATGACTGATAACGAGGCTAGCCTCAT
TCATATCACCAGCAATTGAATctttataatcaaaacattcgattttcaag
catttatgattttcttttgaGAGTTCAAActgaccacgccctttttgtaa
GGTTAAATGGGTATACCCTTTTTCTACAAAATGATCCAATACCTTTGTTG
ATGTGACTGCATTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00051813-exon-scaffold_205-1491911889:225503..225565 | TCONS_00051813-exon-scaffold_205-1491911889:225503..225565 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1510915933:225503..225565 | TCONS_00051813-exon-scaffold_205-1510915933:225503..225565 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1575043694:225503..225565 | TCONS_00051813-exon-scaffold_205-1575043694:225503..225565 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1491911889:225988..226114 | TCONS_00051813-exon-scaffold_205-1491911889:225988..226114 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1510915933:225988..226114 | TCONS_00051813-exon-scaffold_205-1510915933:225988..226114 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1575043694:225988..226114 | TCONS_00051813-exon-scaffold_205-1575043694:225988..226114 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1491911889:226453..227482 | TCONS_00051813-exon-scaffold_205-1491911889:226453..227482 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1510915933:226453..227482 | TCONS_00051813-exon-scaffold_205-1510915933:226453..227482 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1575043694:226453..227482 | TCONS_00051813-exon-scaffold_205-1575043694:226453..227482 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1491911889:234378..236495 | TCONS_00051813-exon-scaffold_205-1491911889:234378..236495 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1510915933:234378..236495 | TCONS_00051813-exon-scaffold_205-1510915933:234378..236495 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1575043694:234378..236495 | TCONS_00051813-exon-scaffold_205-1575043694:234378..236495 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1491911889:236808..236939 | TCONS_00051813-exon-scaffold_205-1491911889:236808..236939 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1510915933:236808..236939 | TCONS_00051813-exon-scaffold_205-1510915933:236808..236939 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1575043694:236808..236939 | TCONS_00051813-exon-scaffold_205-1575043694:236808..236939 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1491911889:237882..237949 | TCONS_00051813-exon-scaffold_205-1491911889:237882..237949 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1510915933:237882..237949 | TCONS_00051813-exon-scaffold_205-1510915933:237882..237949 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1575043694:237882..237949 | TCONS_00051813-exon-scaffold_205-1575043694:237882..237949 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1491911889:239348..239498 | TCONS_00051813-exon-scaffold_205-1491911889:239348..239498 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1510915933:239348..239498 | TCONS_00051813-exon-scaffold_205-1510915933:239348..239498 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1575043694:239348..239498 | TCONS_00051813-exon-scaffold_205-1575043694:239348..239498 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1491911889:240856..241818 | TCONS_00051813-exon-scaffold_205-1491911889:240856..241818 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1510915933:240856..241818 | TCONS_00051813-exon-scaffold_205-1510915933:240856..241818 | Clytia hemisphaerica | exon |
TCONS_00051813-exon-scaffold_205-1575043694:240856..241818 | TCONS_00051813-exon-scaffold_205-1575043694:240856..241818 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_205 | supercontig | scaffold_205:225503..241818 + |
Blast
BLAST of TCONS_00051813 vs. Swiss-Prot (Human)
Match: ALG13 (Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 OS=Homo sapiens GN=ALG13 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 4.248e-24 Identity = 56/120 (46.67%), Postives = 74/120 (61.67%), Query Frame = -1
Query: 4284 VTSTKVLDHFVEKGYTHLTLQKGRGQFELSKENHKCLKIECFDYKDSIAGDMNEASLVISHAGAGSILETLSLWKPLIVVVNEELMDNHQFELASKMADEGYLFYCTCASLLETLQTKDL 4643
V++ L GY L LQ GRG + + ++ + YKDS+ D+ +A LVISHAGAGS LETL KPL+VV+NE+LM+NHQ ELA ++ EG+LFYCTC L Q K +
Sbjct: 20 VSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTESFTLDVYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKEGHLFYCTCRVLTCPGQAKSI 139
The following BLAST results are available for this feature:
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