TCONS_00051805 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00051805
Unique Name	TCONS_00051805
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3655

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_205:207190..219667+

transcript sequence

>TCONS_00051805 ID=TCONS_00051805|Name=TCONS_00051805|organism=Clytia hemisphaerica|type=transcript|length=3655bp
CCATATTGTGCGATCACCTTAAAAAGATAAGGTCGGTCAGCGATACAACG
CGATATACTTAACGaatatttgttgattttcttttacGAAATATAAAGCA
ATCATCGCTTGAAGGGACATTAAACAGCTTGCATACAAAGTTTACTAACT
CTTGAGAGAAGAGAAGTCAACATTTTCAATGTTAAAGAAAATCGTACTAT
TTATAGAGATTGCGTTCGTTGATATTTTGACTAATTTGCAGACTACATTT
AGACGctgttgtttttttgtggaCTTTTTTAAAGAATGATGTCTAAATTA
ACAATGTTTTCCCTTGCGTTTTGCACGATCTTCTGTCTGTCGGTGGAATC
AGCAAAATTAACCAAAGATCACTCCAAATTGGATTTCATCGAGATCACAT
CATTCGAGAAAATCGGAGATCGAAGGAAAAGAGATACTAAGAACCAGGAC
ACTACCGAAGAATATGCACTGAAAACACCATCCAAAGATTACCATTTAGT
ACTAAAACCTTCCAGCCATATCATTGGCCCGAACCTTTTCGAAGATGAGA
AAAGTTGGGAAGAAGAAAATTGTCATTACCAAggattggaaaaaaatttt
ggtggaCAAGTTCTTCTTTCAACATGTGGCGGAACGTTGAAtgGATTGTT
GGTGGAcggcaaacaaaacaaaacgtaTATGGTGGAATACGAGGAAAGCC
TTGCGAATCACATCATGTATGAAGTTGACAAATTACCACAAAACAAACGA
ATCACCATGGCAACTGATATCCAAAGAAATGAAATTACAAAAGTTGAAGG
CGTTAACATCAAAGCAAACCACAGAGCGCGTCGAGACGTTTCAGTGGACG
CATCAGACGTTTCAGTGGACGCATCGGACGTGGAGAAGTATGCTTCATTG
GTCATGGTGGTCGACAATTCAGCCTTCGTGCATCTTGGCAGCGATAAAAC
GAAAGTGATTCATTTTGTACTGGCTATTGTCAATCACATGGACTTTTTAT
TTCGCCAAGCTAACATACACGTCATTCTGACCCATCTTGAGATTTGGGAT
GTCAGTGACAAATTCACGGTGACGGCAACAACAAGTGACAATCTGAACCA
CTTCACCCAGTACAATAAAGATATCATGATCAACCAAAATGGATGGAGGC
ATGATAATGCTCATTTCTTAACTCATGTAGACCAACAAGGTGGTTTGGTT
GGACTTGGAGCCGTTGGCAGCATTTGTGGTCAAGGTGGACTTTCACAAGC
TATGTCTCAGATTTGGAGTGACAACCCTTTGATAACAGCTGGTACGGTTG
CCCATGAGTTTGGACACAATGTTGGATTATACCATTTTACATCAGAATGC
ATTTGTGATAACCCACCCTGTCTCATGTCTTCATATGCAAATTGGTCACC
AGTTCGAGGCTTGACAGATTGTACAAAGAAAGTGATCGAGGATAGATGTT
CACTTGGAAAATGTTCCTGTTTGACTGACCAGCCTGCTGCGAGTTACATG
GGAGCAACATGTGGAAATGGGATCGTTGAGAAAGGTGAAGATTGTGATTG
TGGACAACCCGAGTACTGCACAAATAAATGTTGTGATGCGTCCACGTGTA
AATTTCAAACGCATGCACAATGCGCAGAAGGTGAATGCTGTACAGATGAT
TGTCAACTGAAAGCAAAAGATGTGCTTTGTAGAGATGCACAGGGAGAATG
TGATTTACCTGAGACTTGTGATGGAAAGCAAGCAACGTGCCCTTTGGATG
TTTACTTGCAAGATTACCAAGATTGTAACTCAAAAACAaGCTATTGTTAC
AAAGGAAAATGTACAAAAACGTTGAATGAACAATGTGAAACTCTTTGGGG
TAACGAGGCGGATCACAGCAGAACATGCATCCGAAATTACAAAGGAGACA
AATTTGGTCATTGTGGAACAGACAAAAATGGAAAGTTTATACCATGTGAA
ACTAAGAATGAATTTTGTGGAAAGGTTCAGTGTCACGGAGATATCGCAag
tcatttcattgtttttggaAGAAGTCGATCAACTGCTGTCTATGGAAGTC
AATGCAGATCGGGATTAACGTATGTTGGGGAGAATATAAATCCAACCATG
GCATTTGATGGAACCAAATGTGATGCAGGAAAGGTTTGTCAAAATCAGCA
ATGTATCGCAACTGATATCGCAAAATCAACTTCGAAGTGTGACGATCGTT
GTCATTTTGGGAGATGTACAAACGTGGGAGCTTGTTATTGTCCACCGAAA
TTCAAATGTCCGGATTGTTCTCGCATGGACCCAAACAATATTAACGGACA
GGTGTGCAGTGAACAACCTTCTCAAACTCATAGACATCATGATGGAAAAC
TCAACTGGGAAgAATACTTGGACCTCTTAACAAGCAACTTGTTCTTGACT
CGATGGAAAGCACGTGTTACATTCAAAAATCGTGTGTCGACAGGTGATAC
GCTCGATAAATACGTCCCAACAAAGAAAATCGACAGTGTAGACCATGCCA
TAGACAATTTGTTCAAAGATTTAAAAGACATGAACTTAGCACCGACAACA
ACGACGACTACAACAACTACAACGACAACGACAACACCTACAACGACACC
AACAACGACACCAACAACGACACCAACAACGACACCAACAACGACTACGA
CAGTTGCACCACTTTGCTTGGATGCGGTCGGGATGATCAATATCGGATGT
CGTTCGAAAAGTGGTGGCACAATGATCGCTAACTATCGTAATGCTATGGA
TTGGAATAATCCATCTGACTCAATAGAAAAAATGATTTGTGATTGTGCAA
AGACTGCAAAAGACGATGGTTATGTTGGCTTTGGTTTGGTTTACTGGGGA
GAATGTTGGGGCTATTCAACCAAAGATGAAGCTGTTAACCAATCAGGATC
GACCAATTGTTCGAATGATCAATATAACTCTTGTGCAGAAGAAGATCGCA
TTTGTATAGGCAAAGCTGATGCCTCGTACGCTTTTTTACTCTGAAGTGAT
TATTATGATTATATGATTTAGCGGAAGACTGCGAGGGAGTTGGTTGCTAA
GTTTTGCGGACCGACAAGTCTACCAACAGAATAGGATCTAACTAACTCGC
AAGTTATCTGTCTCTATAACTCGACGAACAAATCTGCATTCACAATGCAT
GATCGAGTTATAGGGGGTTAACATAGAGACCCCAATGTAATTAACAATAC
TTTATTGTTATTACTGGATCTCAGAAAAGAGCTTATTTGTGGTAGATTTT
TAACCCTTAAACTTTATAATAAATTGTAAATATATTATTTAGAATCTGAG
AATTATAATATGAAAGGAATAAgtttatatattataatatatttttgtgA
GACAAATTTACATGAGCAGGGCCCTTATAATGAACTGGGATGTGGAGGTG
CCTAAAATATAGTGAATAAGGTGTCAACTTCGATTTCGACCCCCTAGTAT
GCCTGAAAATGGCcctatttcaaattttggaatgAAATTAAGTTTTGTAA
ATTATTAATCGTTAtcttaaaaacaactttttatttgagaaaaatgaggA
GGCTATAAACCTATAACCCCGATGGCATGGGCCCTGATGGGTATACTTCA
ATTAAAGaagttttatttctaaaaatgaaaaatatatatgaaaaataaat
gaaaa

Run BLAST on NCBI

transcript from alignment at scaffold_205:207190..219667+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00051805 ID=TCONS_00051805|Name=TCONS_00051805|organism=Clytia hemisphaerica|type=transcript|length=12478bp|location=Sequence derived from alignment at scaffold_205:207190..219667+ (Clytia hemisphaerica)
CCATATTGTGCGATCACCTTAAAAAGATAAGGTCGGTCAGCGATACAACG
CGATATACTTAACGaatatttgttgattttcttttacGAAATATAAAGCA
ATCATCGCTTGAAGGGACATTAAACAGCTTGCATACAAAGTTTACTAACT
CTTGAGAGAAGAGAAGTCAACATTTTCAATGTTAAAGAAAATCGTACTAT
TTATAGAGATTGCGTTCGTTGATATTTTGACTAATTTGCAGACTACATTT
AGACGctgttgtttttttgtggaCTTTTTTAAAGAATGATGTCTAAATTA
ACAATGTTTTCCCTTGCGTTTTGCACGATCTTCTGTCTGTCGGTGGAATC
AGCAAAATTAACCAAAGGTAAGATGAATATTTGATGACTAAGTATATCTC
TAATCTAATACAAGATCCATTCTGCACGAACCACAGTCTGCTTGTTCCAA
AGAAATGTGGGTAATTTGATGATCTGACCTTGATTTTGATGTGACTGTAT
TTCTTTAGCCAATCACAAGCTCAAAAGCTAATTTAACAATTATTTCAATT
CTGGTGTGAAAACCACTTAAGCGGCCAAAGCATGGGCAGATTCTCTTATG
CGTGAAGTAATCAGGGTTTGGTTGGAGATTCATTAATAGAAATCAggatt
tgattgattgattgattgattgattgattgattgattgattgattgattg
attgattgattgattgattgattgattgattgattgattgattgattgct
CAAATGAAACTCTGAATCCCTTTGAACTAAAAAAACCCTCAAacattaaa
atcttttttaaacaaacttcAACATGAACTTTTACATACTTGCAGATCAC
TCCAAATTGGATTTCATCGAGATCACATCATTCGAGAAAATCGGAGATCG
AAGGAAAAGAGATACTAAGAACCAGGTAACATCAATCGATAAGATTTCTG
TTTACAAAACACATTGATATGTAGGCGGTGTAGATTTCAAATATTTGCCA
TGAGTATGAACTATTAGTTTATTCATTTGTCTAAATGTGTacataagaat
atttttggagaaaacCTTCAAATACTGAAAGTATATCGCTTTCCGTATCG
ATGTCGACATATGCCGACAAGAGCATTTTCGATTACTTTGCCGGTATTTG
CCGACAAGAGAGGTCTCTACCCATTTGCCAGaggtttttttaaagtttat
tgaaagttcgattttgaactagatacacgtttttttttttattagaacac
ctaaaatttggctgagcctggatgtgcttatttttttagcaattttcagc
ctgaaatgttcttaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNatctaaatcgacaatatgatacaaaataaagagcacttaaatttggca
aaatttggacaatatttgactctcgacttttgaagatccacccctaaatt
cggttaaaactgcttaaaaagaggaaaaaattgtagtttcttgacatttt
tttccaaactgaggctgggcatgttcttaagatgttcttaatgtttcgac
gaatttcagcctatatgttcttataaactaggttctaataaaaaaaaaaa
cgtgtagcacaTCATCATCACTAATTCAACTTTCAAGATACCAAAATCCT
TattgaactaaaaaaaaccTTATTACAACAAACGAATTTGGGTGTAAcca
aaagaatttcttttttttttccctcCAGGACACTACCGAAGAATATGCAC
TGAAAACACCATCCAAAGATTACCATTTAGTACTAAAACCTTCCAGGTAG
ATACATCAATTTCCctacatttttattcgaaatcGTCAAATCTTCACCTT
TAAGCCCCGagaaaaaagggcaaaaattcATTCAGAGTCGTAGTTATTTT
TAACCAagtgaatttatttttcagCCATATCATTGGCCCGAACCTTTTCG
AAGATGAGAAAAGTTGGGAAGAAGAAAATTGTCATTACCAAggattggaa
aaaaattttggtggaCAAGTTCTTCTTTCAACATGTGGCGGAACGTTGAA
GTAAGATTACATTTTGTTATTGAGAACATCcgatttttttgaagccttcg
gatgttcttaaatttttcagttttaagcctaaaaatgttcttaacatgtt
cttattttcactattttgtgaccatttttacctagtttcctaaaaaatcg
ggtgttttagagtctgcaaagccttaaaatgttcttaatttgttcttaaa
atttttgccatcgaagccttatgttcttatatagtttgttcttataaaaa
aacgtgtactttgaACTACCAAAAGTTTCGAACACTTATTTCAACTGATC
TATCTATTgtcttttaataattttcattgtctgttcaaattataaaaata
gtgGATTGTTGGTGGAcggcaaacaaaacaaaacgtaTATGGTGGAATAC
GAGGTTAGTTAATTTACCAATCTTTCAAAAAGGGATACACCTATTCTACA
TGGTGTACCATTTGTTATGGAAGTTATCTTCTAAGAGTTCACCACTCTCT
TCATACAATGCACGTCTTTCATCTCTGGGCGCAACCGCAAACCAACCATT
GTAACACTCAAAGAACCAAACGATATTGAAAACTGGAGCAAAACGGCATT
AACATTTCCTGAATGACATTTCACATATCATTTGTTTTCAGGAAAGCCTT
GCGAATCACATCATGTATGAAGTTGACAAATTACCACAAAACAAACGAAT
CACCATGGCAACTGATATCCAAAGAAATGAAATTACAAAAGTTGAAGGCG
TTAACATCAAAGCAAACCACAGAGTAAGTCAAAagattttgggccgaacg
tcaATTAACAAAACTTCGTATAAACACAAATAATTACTATAGAAATCANT
TCAGCCATATCATTGGCCCGAACCTTTTCGAAGATGAGAAAAGTTGGGAA
CAAGAAAATTGTCATTACCAAggattggaaaaaaattttggtggaCAAGT
CCTTCTTTCAACCTGTGGTGGAACGTTGAAGTAAAAATTCTCATATATGT
ACCGAAAGTTTCGAACACTCGCCGCATCAGATCTTATTGTCTGATGACAA
TCTTTATTGTCAATCACCTGTTCAAAGTCCTTAACAGCAAACTCTAGCCC
AGTCCCCTAGTTCATtcttttatgattctgatagcgtcCATCacatccat
cagtaaaatcaaaaagtggtgcaGTGACGAGATTGCTTATACAggaatca
gaaaatatcatGACAATTAATCCTTTTTCTTTTCCAATAGTGGATTGTTG
GTGGAcggcaaacaaaacaaaacgtaTATGGTGGAATACGAGGTTAGTTA
ATTTACCAATCTTTCAAAGAGGGATAGACCTATTCTACAAAGAGTTCACC
ACTCTCTTCATACAATGCACGTCTTTCATCTCTGGGCGCAACCGCAAACC
AACCATTGTAACACTCAAAGAACCAAACTTTGGTACTTCTCGAAGCACCA
AGACATTTTCTGAAATCTCCAACGATATTGAAAGTTGGAGCAAAATGGCA
TTAACATTTCCTCAATGACATTTCACATATTATATCTGTTTTCAGGAAAG
CCTTGCGAATCACATCGTGTATGAAGTTGACAAATTACCACAAAACAAAC
GAATCACCATGGCAACTGATATCCAAAGAAATGAAATTACAAAAGTTGAA
GGCGTTAACATCAAAGCAAACCACAGAGTAAGTCAAAagattttgggccg
aacgtcaATTAACAAAACTTCGCATAAACACAAATAATTACTATAGAAAT
CATATTTAACCTCCCAGTGCAATCTCATACACAGAATTATATTCCAgcac
tttttgtttttaatgataATCCATGACGCATGCGCTCCGAGGGAAGGGGG
GACTCAAGTTAAACGACCGCACGTGCAGTCTATAAGGGTGTGTTTTTTGG
GCTTTTcaaagtacactgtaagggtcgaaatgagagAGAGTGTACTCTAT
GTGTATAAAAAGTTAGGAACACGAATTTCTTATGggtaaaaatctgaaaa
aacttatcttttttttttgctttaaatggaCAGACAAAAGAAATTCCACC
CTAAAGGTCGATCTTTACCCATATTTACTCAAGCGAAGGGAAGGACTGTT
ATGAATGTGCATCCAGTTGAATAGCACGGTAAAGAGTTctgattttaaat
taattttcagGCGCGTCGAGACGTTTCAGTGGACGCATCAGACGTTTCAG
TGGACGCATCGGACGTGGAGAAGTATGCTTCATTGGTCATGGTGGTCGAC
AATTCAGCCGTAAGTAACACAATGGGTTTCAATgggtttcattttttatt
gtcgAATGGAGTCGTAGAGAATTATATATAATAGAGAGTAACTAACACTG
GATAAAATTAGCTAATATATGTCCTTCATGTTTCCTTATTGCAACCAACT
TACTtacaaaatttgatttgaatgcGATTTATCAGATATTAGCGATGTGA
AAGTCTCGCTAATTGCAATCTCAGCCAGGTTCTTCTCAGTTGACGGGTCT
GATGATTGATTGAATTTGATGGTTGTGTGATAACAAACTTTGTTCTCTAC
TATTTAGTTCGTGCATCTTGGCAGCGATAAAACGAAAGTGATTCATTTTG
TACTGGCTATTGTCAATCACATGGACTTTGTAAGTAAAATAAATCTCAAC
GAAATATACATACTAACAAAGGGTGGACGAATGAAACAAACTTGAAAAGA
GAATTTGGAATAAGGCCTTGATATTATTCAGCTTTAAACCTATctactac
tttaggcgtacgaactttcgcaagcagaaactttcgcgaggtcgaaaaat
cgcgaaattcacgacatttacttttgcgaatttgaggataaaaatgagaa
ttctcGACTTTAAAAGGGCATTAAAGGATAATAATATGCCGAAAATTTGA
TGtttattacgatttcgaggTTTCATAGATTTCcaacttttttgagaatt
tttcacaagcataaactttcgcgaattgccctgtttagaattttcaaaga
catttactttcgcaaaaaacgccgaaaatcgcgaaaatcgcgaaagtttc
tgatcgcgaaagtttgtacgcctaaagtattctaTATACAAGTTTCGAGC
ATTTCTCTTCAGGTCCTTTTTTAAGCTTGGCAGTTGGTTCgtttttattc
taaattttattcatttataCTTTTCAGTTATTTCGCCAAGCTAACATACA
CGTCATTCTGACCCATCTTGAGATTTGGGATGTCAGTGACAAATTCACGG
TGACGGCAACAACAAGTGACAATCTGAACCACTTCACCCAGTACAATAAA
GATATCATGATCAACCAAAATGGATGGAGGCATGATAATGCTCATTTCTT
AACGTAAGAAAAATATGAACTAAACTTTTACCAAGCTTGACGAGTAGAAA
GTCCAACTAGAATCGATATTTGACGTTTACATAATTATAGTCTTTTGATT
GCCTTCACGAGGCCCACAGTCAGCCGGTTCCGACTATCTATAGACTGAAC
GAATCATTGGAAGGAACAGGGATGAGAACAGGGAGCTCCTTATTGTGGCG
CTGATACCACTTGACTATCCCTTCCATGTTCCATTTCTCTATCACCTTAA
GAACTATCCGTTAAATTTGCTTTCAAAAAAGTGTGATCTAGTGGTTACGA
CAGTCGTGAGCTCTCCCAGTTGTCTTTGATTCACCTCTGATTCTTCAAGT
CACGTGGTAAATATCGCTTTTTTGCACGGTTCTTCATCAACATGAGTATT
AAATGAATAACCGATCAGAACGAAAAATTTCTCAGCATTTCTCATTATTC
TTTGCATCACATTTTCTAGTCATGTAGACCAACAAGGTGGTTTGGTTGGA
CTTGGAGCCGTTGGCAGCATTTGTGGTCAAGGTGGACTTTCACAAGCTAT
GTCTCAGGTACAATTTATTCATTTTACATGAGCTAGAAACCAGGGGTACT
CAAGACTGCCGGAGCCGGAGGAGTTAGGAAAATAAACCCACTTTCAAATC
TCCTTTTCAAAACGATGCAATGTTATCAGAATAAAATAAGGCTTGAAGTG
ATTTTATCTAGTCGGTctagatgaaaaaatattaaatttaacgaatcaaa
tattttcaatcgGAATTTAAACCGTATGGGTGATGCAATATCCATCCTAA
AAATTACACTTTCTTGTTTATCGTATCACTTATATTAAAGCAAAAAACAA
CATCCTTTTATCACGAGAAATTCTTCTTCAGTGAGCGGAAATACcaaaag
atttcttttaaatCGCCAAGCAACACTGTAAAAACTCCTAAGATCCATAT
TTTGTCACTGCATGACAACGTTTAACAACGAAAAACCGACAAAAAAGAGC
TAACGCCGACGGGCAAACCATCAAACATACACGCCCTCTCCTTACTTTTC
CGGTATTCTGATCACGAATTCGTAAAATCACAAACTTTTTATAATGCCTT
cttgaaaaaggtttgaaattttcgaaataatGTCAAACAAATCAACTTAA
AGAGCTTGATTTCAAGAGCAGCGACATAGGGCGGTAGTTAAAAGATAATA
CATTAAAGAGACGAGTTGGTATAAAACTAGAGTTATAAATACTATAACCT
GATCTCTCAATCTTAGATTTGGAGTGACAACCCTTTGATAACAGCTGGTA
CGGTTGCCCATGAGTTTGGACACAATGTTGGATTATACCATTTTACATCA
GAATGCATTTGTGATAACCCACCCTGTCTCATGTCTTCATATGCAAAGTA
TGAACTACTCATTTTGACAAGAAAAGTTTTGGGGATATAATGACCGTTCT
ATGGAAATGCAATGATAGTTCTTCGAAAAGCTTCGTTTCTCTGATTTTGC
GTTGAGTTTGACCAATGATAGAGTTTGGTCAGGATAATTTTCGTTTTGAA
GGCAATTATCAGAACGCAGAAATATTTAATGCTACTTGTAATTTCTAATC
TATTTCTTTTGACTTTAGTTGGTCACCAGTTCGAGGCTTGACAGATTGTA
CAAAGAAAGTGATCGAGGATAGATGTTCACTTGGAAAATGTTCCTGTTTG
ACTGACCAGCCTGCTGCGGTAAGAAGATTGCAAAACCGAGGATAAATTGG
TTTAATATTTTTCGCTGAAAACGGGGGAGATTGAAAACATAAAACCCAAT
CTTTTCCGGCAGGGTGCGGGCATTTCTAACCTGGCTGTGAAATCATGGTG
AACTTTCGAAGGTCCATACTAGGACGAACCTTCAACATGGACCCTTCACT
TggaattttcacaatttttcatcaatttcaaaCGTATTATTTCTTCTATT
TGACAGAGTTACATGGGAGCAACATGTGGAAATGGGATCGTTGAGAAAGG
TGAAGATTGTGATTGTGGACAACCCGAGGTTCGTTTCTTGGAAGATTTGC
TTGAATAAGATTTCTCAAGGAAGAAAAGAAATAGCGTTTCCAAACTATTA
TAGAGACGCTAGATCTAATATTTTCGTAAAGAGTTACAGATACAACTAGA
GAAGAAATCAGCTCAACCTTAACGAATGAAATCGAAGTTAGACCATAGGA
GAGTGTGGTAACGCACGAGGcggaatcttcgagttagaaaacttcgagtt
agcaattttcgagttagctaaattcaACATTCTGTAACTAAAATCTACAC
TATTAAATAAACTCTTCTTCTTCTCTACTTAGTACTGCACAAATAAATGT
TGTGATGCGTCCACGTGTAAATTTCAAACGCATGCACAATGCGCAGAAGG
TGAATGCTGTACAGATGATTGTCAACTGAAAGCAAAAGATGTGCTTTGTA
GAGATGCACAGGGAGAATGTGATTTACCTGAGACTTGTGATGGAAAGCAA
GCAACGGTGAGTGTCCAAAGTCATCGTCTCAGTGTATTTAGACCCTGTAG
AAAAGAAAATGCATAATCAGCAAATTTGGTTCAACCATTTCATTTACAGC
TACTATAAATACAATTTTATCATTATGCAAATCGACATAAATGCATGAAG
CTACATAAATtgagattcttataaaaatgagtTGACTTTTTCAGTGCCCT
TTGGATGTTTACTTGCAAGATTACCAAGATTGTAACTCAAAAACAGTGAG
TATTCTTTTTTTCTGTTACCAAAAAATGtattaaatttaacaaaaatctt
tttccttgTATTNATTCTTTCTGTAACCAAAAAATGtattaaatttaaca
aaaatctttttccttgtatatctttatttttcaaaattttgaagtgtttt
ttcaaaatccatcGTTGTCATGTCTTTTTTCTCCTTATTTCCTTTTAAAA
GTTCCCTTTTCCATGATTTCCAAGTTTTCCCTAAAAAGCTTCTATCGCCA
ACAATTACCAGCCTTACCATTCTGACCGGCCTGGCGATATTCTAGAAGTC
AGATTTTCTAAACTTTAGAATGTAATTAAAAATCTGTACCCAGTACCGTG
GGATAACGATTaagaattttcatttctttcagaGCTATTGTTACAAAGGA
AAATGTACAAAAACGTTGAATGAACAATGTGAAACTCTTTGGGGTAACGG
TAAGTCATATTTGTTGATTCTTTGACctggaatacacgttttttgtgAGA
ACATCTAAATTtgttgaagccttcggatgttctaaactttttgagtttta
agcttaaaaattttcttattttcgccattttgtaagtatttttgtaCGAT
TTCCTAAGGGATTTGGTCCATGAAGActtctaaaatgttcttaacttgtt
cttaatattttaaccatcgaagccttatgttcttatatagtttgttccta
taaaaaacgtttagtgAACAAATGAAACCAAAGTAGATCTATTAAGTGTC
ACCAAATCATTCAACTAATCATTTACTTATTGATTAAAAAGCGGCAAGCA
AACAAAACAAAGGAAAGGTGTTTTAAACGCTGAACATCGTTTGTTTTTGC
AGAGGCGGATCACAGCAGAACATGCATCCGAAATTACAAAGGAGACAAAT
TTGGTCATTGTGGAACAGACAAAAATGGAAAGTTTATACCATGTGAAACT
AAGTAAGAACTTCTGAACTTGTTTTTGACTCAGGTCCATAAGGGCCCATA
AGTAGAAATAAAAGATTGGCGCAGTAGAATTAACACCTCTTAATCAAGTT
AAGATTTAGGGTGGAATAGTTTACATTGTGTAATTATGCAACGAAACTTC
ACAGATACCAATTACTCGTGGGAAGTTCATATATCAAACTGAATTTTCTT
TCAGGAATGAATTTTGTGGAAAGGTTCAGTGTCACGGAGATATCGCAagt
catttcattgtttttggaAGAAGTCGATCAACTGCTGTCTATGGAAGTCA
ATGCAGGTAAAAAGAATTGTAGTCATTTATAGCCATTGGACATTACTTTG
AATCAGAAATCAATATTGAGATTTTACACTAAAGCAATGCACCCTTTGAC
GCCCTGTTGGATGATTGTGATCGCGATATTATTGCCCCATAATCGTCTTC
AAatttcttcagatttttttccttttgtcATTTCTAGATCGGGATTAACG
TATGTTGGGGAGAATATAAATCCAACCATGGCATTTGATGGAACCAAATG
TGATGCAGGAAAGGTAAGAGGATTTCAGTTCTTTGTTAATTTATTAgttg
atatttttctaaaatctagTTAATCATATTCACAAAaccccttcttcatt
ttcgagaccaatttataatttttgtgatttttctttaCTGCACCTTGAAA
AACTCTCAATCTTGTTCATTCATACAGGTTTGTCAAAATCAGCAATGTAT
CGCAACTGATATCGCAAAATCAACTTCGAAGTGTGACGATCGTTGTCATT
TTGGGGTAAGTCTGCAATAGCTTACATCTCTCGAGAGATACAACATATCA
AATTTAAGATTTCTCTCTTGACGGACCAAAGTCCACTAGAATATGCAAGA
ATAATAGCACTTGGTTTAGAATCTTAAAGTGAAAACCCATCAATTAAAAT
AGTTCCAATGTTTCTATCCCATAGAGATGTACAAACGTGGGAGCTTGTTA
TTGTCCACCGAAATTCAAATGTCCGGATTGTTCTCGCATGGACCCAAACA
ATATTAACGGACAGGTGTGCAGTGAACAACCTTCTCAAACTCATGTAAGT
TAAAACACTAAATTAAATTATTATAACACCTTCAATATCAGATTGAGAGC
ACTCCATCAATGTCATGATAGGTTTTGCGACTTTACTCCTCCGTGCTAAA
ATGTATTTAAATTACAAAGCCTCATTTGCATGCATCtattttatcttcat
tttctctCGTTTATTATAGAGACATCATGATGGAAAACTCAACTGGGAAg
gtaatttcatcaaaatattacTTACTTATTTACTTCCTTACTTTCTAGAC
ATACTATACTTAACAAATAGTGAGCATCGATAGCCTTCAACAAGCTATTT
CATAATCTTATCGATAATTCGTGGACCTGCAGAGAATCATAACTCTAAAA
AGATTCCTGAAAATTGACCTTCGACTGACATATGATTTGTTATGTCCCTG
AAATTGCCTCTACGACATTGACCATGACAATAAAACAGATAGAAGACAGA
CAGAAACGAAATGACAGCACACTCCATCACACTCTCACATATTTTACTTT
AACCATTAACAGAATACTTGGACCTCTTAACAAGCAACTTGTTCTTGACT
CGATGGAAAGCACGTGTTACATTCAAAAATCGTGTGTCGACAGGTGATAC
GCTCGATAAATACGTCCCAACAAAGAAAATCGACAGTGTAGACCATGCCA
TAGACAATTTGTTCAAAGATTTAAAAGACATGAACTTAGCACCGACAACA
ACGACGACTACAACAACTACAACGACAACGACAACACCTACAACGACACC
AACAACGACACCAACAACGACACCAACAACGACACCAACAACGACTACGA
CAGGTGTGTGAAGACTATATTATATTAATACCAGCcttaactgttcttat
ttttccgtGATATTCAGGCTTTAAATGTTCTCAAAATGGTCTTTATAAAG
AGTTTAAAAGGTAGCATTTTGGCACCTTTTCTTCTCCTCCCACTTAACGA
ACGGAACGAAGGAAATACAATGTCTGTCAGGGTATCAAAAAGATCCATAA
AATAATTTGGTATTTTTCTCACTATTTTCTTTTCTAGTTGCACCACTTTG
CTTGGATGCGGTCGGGATGATCAATATCGGATGTCGTTCGAAAAGTGGTG
GCACAATGATCGCTAACTATCGTAATGCTATGGATTGGAATAATCCATCT
GACTCAATAGAAAAgtaagttttacttttttatcaacCCTTGATATCAGA
ACTTTAAAGTTATTTGTGGCAACGGCATTAAATTGAGCAAAAAATAGGCC
AGCCCTTTGCATATTTCTTCAAATACCTTATTATAATCTGCCACTTTACC
AAGTAGACAATTTCTTTTGTCTAACTTTTTGATTGGTATGCTAAAGTAAT
TAAATTaaactaaaactaaaacttaaactaaaatttaaaatctccATTTC
CAGAATGATTTGTGATTGTGCAAAGACTGCAAAAGACGATGGTTATGTTG
GCTTTGGTTTGGTTTACTGGGGAGAATGTTGGGGCTATTCAACCAAAGAT
GAAGCTGTTAACCAATCAGGATCGACCAATTGTTCGAATGATCAATATAA
CTCTTGTGCAGAAGAAGATCGCATTTGTATAGGCAAAGCTGATGCCTCGT
ACGCTTTTTTACTCTGAAGTGATTATTATGATTATATGATTTAGCGGAAG
ACTGCGAGGGAGTTGGTTGCTAAGTTTTGCGGACCGACAAGTCTACCAAC
AGAATAGGATCTAACTAACTCGCAAGTTATCTGTCTCTATAACTCGACGA
ACAAATCTGCATTCACAATGCATGATCGAGTTATAGGGGGTTAACATAGA
GACCCCAATGTAATTAACAATACTTTATTGTTATTACTGGATCTCAGAAA
AGAGCTTATTTGTGGTAGATTTTTAACCCTTAAACTTTATAATAAATTGT
AAATATATTATTTAGAATCTGAGAATTATAATATGAAAGGAATAAgttta
tatattataatatatttttgtgAGACAAATTTACATGAGCAGGGCCCTTA
TAATGAACTGGGATGTGGAGGTGCCTAAAATATAGTGAATAAGGTGTCAA
CTTCGATTTCGACCCCCTAGTATGCCTGAAAATGGCcctatttcaaattt
tggaatgAAATTAAGTTTTGTAAATTATTAATCGTTAtcttaaaaacaac
tttttatttgagaaaaatgaggAGGCTATAAACCTATAACCCCGATGGCA
TGGGCCCTGATGGGTATACTTCAATTAAAGaagttttatttctaaaaatg
aaaaatatatatgaaaaataaatgaaaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_032802	XLOC_032802	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_205	supercontig	scaffold_205:207190..219667 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.000279372	0	7.56429	6.50209	14.2414	14.9781	25.9774	30.091	45.8543	34.4544	1.94901	2.62176	1.59342	2.96232	3.7915	0.31276	3.88954	4.7134	1.53749	1.43563	0.581061	0.567708	0.151987	0.333538	0.000212019	0.0483402	0.000597117	0.00278784

Blast

[Close]

BLAST of TCONS_00051805 vs. Swiss-Prot (Human)
Match: ADA12 (Disintegrin and metalloproteinase domain-containing protein 12 OS=Homo sapiens GN=ADAM12 PE=1 SV=3)

HSP 1 Score: 261.536 bits (667), Expect = 1.362e-72
Identity = 199/591 (33.67%), Postives = 291/591 (49.24%), Query Frame = 1

Query:  568 NCHYQGLEKNFG-GQVLLSTCGGTLNGLLVDGKQNKTYMVEYEESLAN-HIMYEVDKLPQNKRITMATDIQRNEITKVEGVNIKANHXXXXXXXXXXXXXXXXXXXXEKYASLVMVVDNSAFVHLGSDKTKVIHFVLAIVNHMDFLFRQANIHVILTHLEIWDVSDKFTVTATTSDNLNHFTQYNKDIMINQNGWRHDNAHFLTHVDXXXXXXXXXXXXSICGQGGLSQAMSQIWSDNPLITAGTVAHEFGHNVGLYHFTSE--CIC----DNPPCLMSSYANWSPVRGLTDCTKKVIEDRCSLGKCSCLTDQPAA--SYMGATCGNGIVEKGEDCDCGQPEYCTNKCCDASTCKFQTHAQCAEGECCTDDCQLKAKDVLCRDAQGECDLPETCDGKQATCPLDVYLQDYQDCNSKTSYCYKGKCTKTLNEQCETLWGNEADHSR-TCIR--NYKGDKFGHCGTDKNGKFIPCETKNEFCGKVQCHGDIASHFI-VFGRSRSTAVYGSQ-----CRSGLTYVGENI-NPTMAFDGTKCDAGKVCQNQQCIATDIAKSTSKCDDRCH-FGRCTNVGACYCPPKFKCPDCSRM 2277
            +C+Y G  + +    V LSTC G L GL+V   +N++Y++E  +S  N + ++   KL   K +  +     N        N+ A +         A     +     KY  LV+V DN  F   G D  KV   ++ I NH+D  +R  NI ++L  +E+W+  DK +V+     +L+ F  + K  ++ +    HDNA  ++ V  QG  +G+  + S+C     S  +    SDNPL  A T+AHE GHN G+ H T +  C C    +   C+M++   +      + C++K +E     G   CL + P    S+ G  CGN  VE+GE+CDCG+PE C N+CC+A+TC  +  A CA G CC +DCQLK     CRD+   CDLPE C G    CP +VYL D   C     YCY G C +T  +QC TLWG  A  +   C    N  GD +G+CG      F  CE ++  CGK+QC G  +   I     S  T +   Q     CR    Y+G+++ +P +   GTKC  GK+C N+QC    +     +C  +CH  G C N   C+C   +  P C + 
Sbjct:  118 HCYYHGHVRGYSDSAVSLSTCSG-LRGLIVF--ENESYVLEPMKSATNRYKLFPAKKL---KSVRGSCGSHHNT------PNLAAKNVFPPPSQTWARRHKRETLKATKYVELVIVADNREFQRQGKDLEKVKQRLIEIANHVDKFYRPLNIRIVLVGVEVWNDMDKCSVSQDPFTSLHEFLDWRKMKLLPRKS--HDNAQLVSGVYFQGTTIGMAPIMSMC-TADQSGGIVMDHSDNPLGAAVTLAHELGHNFGMNHDTLDRGCSCQMAVEKGGCIMNASTGYPFPMVFSSCSRKDLETSLEKGMGVCLFNLPEVRESFGGQKCGNRFVEEGEECDCGEPEECMNRCCNATTCTLKPDAVCAHGLCC-EDCQLKPAGTACRDSSNSCDLPEFCTGASPHCPANVYLHDGHSCQDVDGYCYNGIC-QTHEQQCVTLWGPGAKPAPGICFERVNSAGDPYGNCGKVSKSSFAKCEMRDAKCGKIQCQGGASRPVIGTNAVSIETNIPLQQGGRILCRGTHVYLGDDMPDPGLVLAGTKCADGKICLNRQCQNISVF-GVHECAMQCHGRGVCNNRKNCHCEAHWAPPFCDKF 690

The following BLAST results are available for this feature:

BLAST of TCONS_00051805 vs. Swiss-Prot (Human)

BLAST of TCONS_00051805 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ADA12	1.362e-72	33.67	Disintegrin and metalloproteinase domain-containin...	[more]

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TCONS_00051805 (transcript) - C. hemisphaerica