TCONS_00051799 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051799
Unique NameTCONS_00051799
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1924

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051799 ID=TCONS_00051799|Name=TCONS_00051799|organism=Clytia hemisphaerica|type=transcript|length=1924bp
TTTTAAATTATCGAGAGCTACTGTTATTCTTCCTTTCCAGGAAACATGGA
AATCGAGGCTTTCGTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAA
ACACTACATTGTATCTTTCAATGATGGTGTACTTATCACAGATTGTCCAA
TCTCTCTGCATCAAATATGAAAGTGAGCATTACAGGAGACTTCAAGACAC
CTTGATTGATGGTAAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGA
ATGATATCTGGCCAGGCCCTTCATGGTCATCTCTTGAATATAATGGACAA
TGGAAGATTTTGCATTATGACGTTGAGAAATTCTTTGCACCAACCTCACT
GAGTGCTTACCGTAACAAGGATTCCATTGTTGTCAACATTGTGCGAGATC
ATatttcaaatgagaaaaaactgCTGTGCAATATCTCATTTCACGATTGG
AAAGAATTTGGTATTTTGTGGAACAAGACCTGGTTGTTAGATTTGTCATC
CAATCAGCATTCTATTGAGATCTTTCAAAAGAGCATAACCGAGTTGCAAC
TACCTGAATCTTCTTACATGACTGCTCAATTGATGGACTTTGAAACTGGT
GACGTCGTATCCAGTACTGAATTGTTTCTGTCAAACTTCTCTGGTGATAC
GCTGAAAAACCCTAATATAAAGTGGAGAATTGACAGAACTCAGCGTAAAG
AAAATGGTGTGGAATTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCA
TTCGTTTGGCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGAT
ACTTATAAACACACCGACTAGAAGGATTTCATTTTTGTCATACCATGAGA
AGTCAAATAACCAGAAAGTGGACTTTATGGAGAATGTAACAGTCAAATCT
TTGTATAATGTCTGGCATTAAAATGTCCTTTTGCAAACAATAGACAATGA
AAGGCATTCAAATAGAATTTGAAGCCTAGTGAGGATAGGCTTGACTTGGT
TAATGGAAAATTATTCccatttcaattttgtttgtgtttacctttaaaag
ctatttcaaaagtaaaaaaagcaaaacaaaatgccAGCCATTTTTGATAA
AGCAGAAGATTGTCGCCCAGAATGGACCAATGCCAAAGCTGAATTCGATG
ATGTGGATGAGCATTTGGTTATCTGTGGAAAACCCGTCATGGAAAGATGG
GAAACCCCTTACATGCATGCATTAGCTGATATTGCTGCTAGCAGAGGTGG
TCGTGTTCTCGAGCTTGGATTCGGAATGGCAATCTCCGGATCACGTATTG
AAACGTACAAAGTGGACGAGCACGTGATCGTTGAATGCAACGATGGAGTg
ttcgaaaaattgaaagtctTTGCTAAAAATGCACCGAACAAAGTGACACC
CTTGAAAGgattttggCAAGATGTTGTTCCCACTTTACCTGACGCAAGTT
TTGACGCCATTTTGTATGACACTTTTCCCTTGTCGGACGACACGTGGCAT
ACACATCAATTCGAATTCATCAATGGGCATGCGCAAAGGCTACTCAAACC
AGGTGGTATTTTGACTTATTGCAATCTAACATCATGGGGAGAAAATTTAA
AAGGGCAATATGATGATATCGAAAAAATGTTCCGAGAAACGCAAATTCCG
AAATTGGAAGAAGCAGgatttaaaaaggaaaatatttcttggagGCTTTT
GGATATTGTTCCAGAAAAAGAATGCAGATATTATCAATTTAACAAAATGT
TGGCACCAACTTGTGTCAAAAAATAAACTGTATATGACCTCGTGTTAAAA
GGGCACTAGCTTTGTTAATATTGTTTGTCATTGATATCTACTCTACGTAT
TTTTCTTTATGTaactttgtatatttttttttttcatttttgacagcaaa
gatattcttcatttttcttaatca
Run BLAST on NCBI

transcript from alignment at scaffold_205:24202..42216+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051799 ID=TCONS_00051799|Name=TCONS_00051799|organism=Clytia hemisphaerica|type=transcript|length=18015bp|location=Sequence derived from alignment at scaffold_205:24202..42216+ (Clytia hemisphaerica)
TTTTAAATTATCGAGAGCTACTGTTATTCTTCCTTTCCAGGAAACATGGA
AATCGAGGCTTTCGTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAA
ACACTACATTGTATCTTTCAATGATGGTGTACTTATCACAGATTGTCCAA
TCTCTCTGCATCAAATATGAAAGTGAGCATTACAGGAGACTTCAAGACAC
CTTGATTGATGGTAAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGA
ATGATATCTGGCCAGGCCCTTCATGGTCATCTCTTGAATATAATGGACAA
TGGAAGGTAATATTATATCAAAACTTCTatagttgatgctctctaattcg
attggATTGGATTTTAATCCaataagggagcgtattgaATAATAGATTTT
TATGTCGTCTGTGACTTTTAATATTATCGAGTAATGGAGCgcatcgaata
gtagaaagtcgaataagagagcatcaactatatttttttttatttcattt
ataaccgtattacttcaaataatgcccccttcttttaaacgcccctcaaa
taaacgccctctTTGAATAAACGCCTCCCCACTAGGAAGGGCGTTTACTT
CAATGGGATTAATTtcgtggggattaaatttcgcggtttagcTCATCTGC
GAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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ggcacctaagagtaatgtagcatctttaatggtaaatctTTTTGGTTTGT
CGTTatacttctcagtgcgttttagacattaatgatatgcccttgataat
acacttgcattataaaatcattgtaaaggagagatcaacaataagaaatt
taaacaagcacaaaatggctgggctgaaagaactcaaaaattaataaagt
gcctcgaaatgccttcactACATTTCagtgaatttttttagaaatcaatg
aaaaagtacatcaagataatactgtgaaaatttaaagccagcaccaaaat
ttatcattcaaactgacaggaaagttgtgagagtaagtaagtatttattt
atcatttaacactacaaaaaagatacaagtgatgatatgcacaaaaaata
tatgaagggagaccgccttatagtctagctaatcaaaaagatgcggccac
ctaagtACAGATTGcgtttataacacttcatgaattatttataaatattt
atatatcttgaatatagttcttataattttaaatctggcgaaaaactatt
gtttccacaaaatacccctagaatatgtccaaaattacttcaagtgttct
attgggtacagattaagatatctagcaatgagaaaactttttttgaagga
aaataataAACTGACAATCTTGATGCTCTGATAAAGGtcggagacagaga
tagaacagcaattaactgaaaagacaatgcggtacatattccagccgcgg
ttTTTTTATATACTATGGTTTCTCTTCAATGTCTTCTTTCCTAGTACACA
ATTATTCTTTTCAATGATTTCATTTGGCCTTCTTGATAGACCGTTAAAAA
ATTTCTTCGTATGCAAACTACGGATGTGGCAAATCATTCCTTCTACAAGA
ATGCAAGTTGATGTATTCGTTCTTTTTATAAAGTTTGACAGAGAATAATT
ACTTGTGGTTTTGCTCTTTTGCTCCCTTTTAACCGTTCAGAATTCCCTTT
TGACAAATTTGATGCAATGATTgatgttatctttttttctctttcattgC
ATCCTGTGTGAGATGtaatcataatttttttgaattagcCCGATATATGC
TATTTTATATGAATGGACTCGAATGACATACTggccaaaatataaaaaat
ataccgTCAACTTATTTGTAataaatggctgtaacttttgatagaattcg
aatcaagttgcggttGTGTGCTCGTTAAatagatattcgtgagtggaata
ttatcaagtaaaaaaattgagatttagggcattttccaaacatttttatA
TGTACTTAATGGTCAATGGTTCTTCGTCGTTGCTCAAGATTTTCAGAAAC
ACACCATATATTTACATATACACgaacgtccaaagttttgaagcgttcgg
atgttcttaacattttgagttttaagcctaaaaatgttcttagcatgttc
ttattttcgtcatttttgataactttgtcCATTTGCCTataaaattgggt
gttttacaGTCCGCGAAGCCTAacattcttaacttgttcctaacattttg
gtcatcgaagccttatgtatgttcttatatagttttagAAAGTTTTAGTC
AAGTAGATCAGCTAATTTGACATTGAATTATGTCACTAATATGTGAAAAT
AGTCAATATAGGAGATTTTTGTCctgaaaaagaaacattttcaatCCATT
CGGCTCTTTCCTCTGTGAAAACTTACCTTTATGCCTAATCATGATATTTG
TAGAAATTGTTCGCAGTGTTCTTTATCGGCaagtatttttctttctgttt
acaGATTTTGCATTATGACGTTGAGAAATTCTTTGCACCAACCTCACTGA
GTGCTTACCGTAACAAGGATTCCATTGTTGTCAACATTGTGCGAGATCAT
atttcaaatgagaaaaaactgCTGTGCAATATCTCATTTCACGATTGGAA
AGAATTTGGTATTTTGTGGAACAAGACCTGGTTGTTAGATTTGTCATCCA
ATCAGCATTCTGTAATCTATCGTTACTTTTATTTGTTTCTTGATTTATAG
GGGAATACAAGCATTGCTACGGATGAGAAACAGCTGAGGGCTAAAAAGGA
ATCTTAAGATACCTTGGATTTCGGCTTATAGATTTAATCTAGAGCCTTTT
TTATTTATGTACACATTTTCAAGAGGATAGGACCTTCGCCTCTAGCCTAT
GGCTATATCTCACCGATTATTACAATATATTTCGGTCGATTTTATCTTAT
CTCAGATGGTAAATCTTGAGAAGTGATAAACTTCATTCCCTAGCTTACGT
TCACTTAAAGTTTTAACTAACATCAATGGTTCCCTGTTTATCCTAGTAGA
AAGGTCAAATTCTTATCTCAAAATTCCCATTTTCAGTATCTGTCTATGTT
GATTTAAGAGTGCACAGTGTTAAACCTTTTGAAATGCACTTTGCATCTGT
ATAGAAAATGAAAGATTGCTGTCACACCCATTACTTCGTGAGCTTTCCAG
TTTATGattcttgaaaatgttttagATTGAGATCTTTCAAAAGAGCATAA
CCGAGTTGCAACTACCTGAATCTTCTTACATGACTGCTCAATTGATGGAC
TTTGAAACTGGTGACGTCGTATCCAGTACTGAATTGTTTCTGTCAAACTT
CTCTGGTGATACGCTGAAAAACCCTAATATAAAGGTACTTACTATATaga
tattttccttttttatgaGCAAAGGTCATGAAACTAGGCATATCTTATGA
GCACTAGAATTAATCTCGTTTCGATAGCCTTGATTCACTTGATTATattt
tgataactgaaaattaattcacgTAGGAATAGGAAAACAGCTCAGACCTA
CTTATCGAGGATATCTTGGTCGGATTATGATTCAAATCTATAGAGTTTTT
GTCTACAATTAAGTAATAAATAATCTTTTAATTATGTCTTCAAATTCTTC
ATGCAACAGAATTCTGGCtggaaaacttttttcgctaCCCAATGCTTTTG
ATTTGAAACccaattagaattttttttcgtaaAAAATGATATCAAACATG
AGGAACTTATGCATCTAACTTTCTTCTAGAGAATGTGATTTGACGAGGTA
TAATCCCAAAAGAATCcctaaatttgataccttcttactgatcaaaatat
attttctctaTTTAGTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGG
TGTGGATTTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTT
GGCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGATACTTATA
AACACACCGACTAGAAGGGTAAGCTGCTTACTTAACTTCTTTTGTTAGTT
AAATGACCAAAGCGTCTGTTttatatacacccctgtctcacaaccctaGT
GAAACTTCTTCCCATGAAAAGTTCTATCGAAATCCCGATGGGGATaagaa
ttctattgttcttagtTCAAAAACTCCAGTGTATTTTAAATACGGACGAA
GCAAATCAATTTTACAGTTGTCTGAAATTGTAGggaattttttcccaccg
gggacgaagttttgtccaaattttccgGTGGGGTTAGAGTGGGGGTgtca
ccgggtctgtgacacatgggTGTTGTTTACCGATCTCGATATCCTTTTCT
GTTACTCGCAGTAAATCAGTGAGAAGTTCAATGTAAAGTTTGTTGAGAAA
ACAAACACACAAAGTGtgtgaatattttgaaagtaatCTATAAAACAGAA
AGGTCTTGAACTCCAGTTGATTTCAAAAACAGATATATTTTGGTTGTGTC
ATTTTTATGAATGAACTTATTATCAATGGACCCGTTTTCAGAAAACTATG
AGCTTTGGAAAATATCTGTTTCTTTTTGCCACGCCTAGACTTTCCATAAG
CTTAGAATATTGAGTATTGTGAACACTTTCATTTATTTTTCCGAATTTTT
CAAAGCCTTCCCAGCTTCTTGAGAGGAGCTGAAGTATGTTGAAGAAAATG
GAAGTCGTGACCTGAGAGACAAACCTCTAAAATGAGGAGGTTCTGTGGTC
ACTAGGGATGTTCAGACGTAAAGTAAAGTACTCAAAAAATAAGcattgat
ttcaaatatataATTCTGTGACGCCAATTTCCATAACTTGAACACGCGCG
GGGAACAAAGATTTGCTCGGGTTATGGAGTAAGATCTATAAGACATTGTT
GACTGAAGGGACAATGAAACTTGgtcgagttaaggaaacatttgagttat
agaggatcgagttaaagagactccgctGTGCTCATGGCCCCCGTCACCAG
GGGAGCCAGGGGGNTAACTTTCTTCTAGAGAATGTGATTTGACGAGGTAT
AATCCCAAAAGAATCcctaaatttgataccttcttactgatcaaaatata
ttttctctaTTTAGTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGGT
GTGGAATTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTTG
GCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGATACTTATAA
ACACACCGACTAGAAGGGTAAGCTGCTTACTTAACTTCTTTTGTTAGTTA
AATGACCAAAGCGTCTGTTttatatacacccctgtctcacaaccctaGTG
AAACTTCTTCCCATGAAAAGTTCTATCGAAATCCCGATGGGGATaagaat
tctattgttcttagtTCAAAAACTCCAGTGTATTTTAAATACGGACGAAG
CAAAGTCAATTTTACAGTTGTCTGAAATTGTAGggaattttttcccaccg
gggacgaagttttgtccaaattttccgGTGGGGTTAGAGTGGGGGGTgtc
accgggtctgtgacacatgggTGTTGTTTACCGATCTCGATATCCTTTTC
TGTTACTCGCAGTAAATCAGTGAGAAGTTCAATGTAAAGTTTGTTGAGAA
AACAAACACACAAAGTGtgtgaatattttgaaagtaatCTATAAAACAGA
AAGGTCTTGAACTCCAGTTGATTTCAAAAACAGATATATTTTGGTTGTGT
CATTTTTATGAATGAACTTATTATCAATGGACCCGTTTTCAGAAAACTAT
GAGCTTTGGAAAATATCTGTTTCTTTTTGCCACGCCTAGACTTTCCATAA
GCTTAGAATATTGAGTATTGTGAACACTTTCATTTATTTTTCCGAATTTT
TCAAAGCCTTCCCAGCTTCTTGAGAGGAGCTGAAGTATGTTGAAGAAAAT
GGAAGTCGTGACCTGAGAGACAAACCTCTAAAATGAGGAGGTTCTGTGGT
CACTAGGGATGTTCAGACGTAAAGTAAAGTACTCAAAAAATAAGcattga
tttcaaatatataATTCTGTGACGCCAATTTCCATAACTTGAACACGCGC
GGGGAACAAAGATTTGCTCGGGTTATGGAGTAAGATCTATAAGACATTGT
TGACTGAAGGGACAATGAAACTTGgtcgagttaaggaaacatttgagtta
tagaggatcgagttaaagagactccgctGTGCTCATGGCCCCCGTCACCA
GGGGAGCCAGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccaatattttgcaaag
tattttttttttactttagaaaatcttatatataccgtttagaggggtga
aataagggtaaaaagtcgaaaattttcttcgtcgcccatccggtgggcga
catttttttttggccccctcaattcgatttgcacgccgggggccatgcTA
TGAAAATTGGTttacatcaaaaaatttctgCACAAAACCTCTTTTTGTTG
TAAAAAACTTAGTTAATAATCGGTATCTTGACAAATTAATTCTGAAGACC
AAATTATTTTAAAGTCACAGTCTtgtcaaaatataattttgtgaTATTTC
TTTTTATAGATTTCATTTTTGTCATACCATGAGAAGTCAAATAACCAGAA
AGTGGACTTTATGGAGAATGTAACAGTCAAATCTTTGTATAATGTCTGGC
ATTAAAATGTCCTTTTGCAAACAATAGACAATGAAAGGCATTCAAATAGA
ATTTGAAGCCTAGTGAGGATAGGCTTGACTTGGTTAATGGAAAATTATTC
ccatttcaattttgtttgtgtttacctttaaaaggtaacatttttaaatt
gtttttgtttcatttagaaatattttaagactgtttttcgATATGAGTAT
TAAGTTTCTATGATATGATTGAAATGACATTTTAGTCCATTTATGACGTT
GATGTTTGACAAAGCTTTTCATGTGAAAGCTGTTTTAACTTGAAGCAATG
AGCCTGGAGAGGAGGTTCTTCCAAATATGAAAAAAGATCACGTGATTATA
CGCCTGACTATAAAATAAGATTTTATATGATAATATAATTATTAATTGGA
CATATTGTGCTTCTTGGTAGTCTTGTGCGGTTTTGTTGAGTACTCCAAGG
GGatgtaccgggtgcgccaaGAAAAAGTATACAAAGTGTACAGTATAGTA
GGCCTGATTGGTGCTAAAAAAGTTTCTTGGTTAAAATAGTGCAAATTTGG
AAATCGAATAACTCCCGCTCAGTACAGAAATCGGCCATTATCGTCTTCTA
TAGTCTCCTATATTATTCTTCGAAAGCTTTAATTGGTTTTGGCCTAAagt
gagtttgaaatttccgaAAAAAGATTAGACTCTTGGGTTGTAGCCTGGTT
TTCACGAAATGGGTCAGGAAATAACGGCTATacccttttttggacctacc
ccggtggggtggaggtcctataaattaacccgtgttcgttagttagttag
ttagttaccaacttttctcgagattggctcatNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNcccccccccccaatattttgcaaagtat
tttttttttactttagaaaatcttatatataccgtttagaggggtgaaat
aagggtaaaaagtcgaaaattttcttcgtcgcccatccggtgggcgacat
ttttttttggccccctcaattcgatttgcacgccgggggccatgcTATGA
AAATTGGTttacatcaaaaaatttctgCACAAAACCTCTTTTTGTTGTAA
AAAACTTAGTTAATAATCGGTATCTTGACAAATTAATTCTGAAGACCAAA
TTATTTTAAAGTCACAGTCTtgtcaaaatataattttgtgaTATTTCTTT
TTATAGATTTCATTTTTGTCATACCATGAGAAGTCAAATAACCAGAAAGT
GGACTTTATGGAGAATGTAACAGTCAAATCTTTGTATAATGTCTGGCATT
AAAATGTCCTTTTGCAAACAATAGACAATGAAAGGCATTCAAATAGAATT
TGAAGCCTAGTGAGGATAGGCTTGACTTGGTTAATGGAAAATTATTCcca
tttcaattttgtttgtgtttacctttaaaaggtaacatttttaaattgtt
tttgtttcatttagaaatattttaagactgtttttcgATATGAGTATTAA
GTTTCTATGATATGATTGAAATGACATTTTAGTCCATTTATGACGTTGAT
GTTTGACAAAGCTTTTCATGTGAAAGCTGTTTTAACTTGAAGCAATGAGC
CTGGAGAGGAGGTTCTTCCAAATATGAAAAAAGATCACGTGATTATACGC
CTGACTATAAAATAAGATTTTATATGATAATATAATTATTAATTGGACAT
ATTGTGCTTCTTGGTAGTCTTGTGCGGTTTTGTTGAGTACTCCAAGGGGa
tgtaccgggtgcgccaaaaaaaagtatacaaagtGTACAGTATAGTAGGC
CTGATTGGTGCTAAAAGAAGTTTCTTGGTTAAAATAGTGCAAATTTGGAA
ATCGAATAACTCCCGCTCAGTACAGAAATCGGCCATTATCGTCTGCTATA
TAATTCTTCGAAAGCTTTAATTGGTTTTGGTCTAAagtgagtttgaaatt
tccgaaaaaaaattagacTCTTGGGTTGTAGCCTGGTTTTTACGAAATGG
GTCAGGAAATAACGGCTATACCCTTTTTTACTTCTGACTCGAATTTAGAG
CTTTGGGTTCcaaattttcacgatttttatGTTACCAGTTGGGCTATTAC
TAGCTACtattagcgttttatctaggaAATATAAGAAAGATTTTAGCCTT
atgattttagtttcaattagCAAAGATGTGCCTACCCCCTGGTTTGGTAC
ATGTGATTATTATAGCAAGTTGAACCAATTAGTGATAAGTGAGGCCTGTT
GTACGAAAAATCCTGTGgtctcaaatcaaatttttataatcAGCTTATaa
ttaaaaacaagataaaacttaatccgaaaattgattttgccatGGATCAA
TGTGGAGTCagatcacaaacaacaaaattttcattttttgaaaaaactaa
tattTCGCTTATCAACAAAAGCATCGTCAGTGTGATAGTAATACTGAAAA
TGTTGAAcaaatttctagaaaaatcaACTAGCGGAACAAATTCAAGTCTC
TAGAGTCCTTTTCCAACGTTGTTTACGAGTTTAAATGTCCTGGATGCTCT
TCCAAATACATGGGAAAAAGTGATCGTACCCTATCTTGTTTTCTATACTG
TTTGAAGAAGAGTGTTTGAGCTGACATAAAAAGGTTTTTGTTTGACGTGG
TGAGCGTACAAACatctattatttttttcatagaattaTTTTATGCTTTC
TCAATTATTGAGACGACtttgtaaattttgtagtttatataggaagaaag
aaatttgtaaaaaactaGGCGTTATTTTATTGagaattcgaaaaataaaa
tttatatggTAGTTATAAATCAATAGatagttttaaaatgttttacctAT
CCTGCAGCGAATCTTTTATTTATAATgtcagccattttgaaaaatagtaa
ACTGGATGGCCACATATCAGGATGAACTGTTTTTAACAATGATTGAAATT
CAGATTTGAATAACTGAACTTCTGTTCACTGTGACAGGACGAATAAAGGT
AGAGGAATTCGATCGATAACAATCATTTGATGAGAATCTAGAAACAGTAT
AGCGGATTATATATAGGGTGTCTGTCTAgtattgaaattaattttgcatC
TGACACCACGTTTGTGAACTCTGCTAGATCACTTGGCTTCAGTGTAACTA
GCTAGCCTTTGGAGGTTGTTGCTTCTGACCCGATTTTCACTGGTTGGCGT
TTAAATTCGATAAAAGAAGTTACGTGTTCGAAATCTATAATTCTCAACTA
TATTTCACATTCCTTTTTagctatttcaaaagtaaaaaaagcaaaacaaa
atgccAGCCATTTTTGATAAAGCAGAAGATTGTCGCCCAGAATGGACCAA
TGCCAAAGCTGAATTCGATGATGTGGATGAGCATTTGGTTATCTGTGGAA
AACCCGTCATGGAAAGATGGGAAACCCCTTACATGCATGCATTAGCTGAT
ATTGCTGCTAGCAGAGGTTTGTTTTGAATCTGTCTATGTTTGAAACGCCT
CAACAACCCATAGAAATCAATTAAAGGGAATAAATTAGATTGAAGCGCTC
ACAGTCCATCTCTTCCTCGTTCAAATGTTaatgataaaaatttgtttGTC
CTCAGCCAAagatacgtttttttataagaacaaattatataagaaaaaag
gctttgatggccaaaatatgtAAGAAAATGTTTACCACTGGCTAAACAGG
GGTCTAAGACGAaacatttgatttgatttgagttgAGTTGTTGTAAAACt
caaaatgaaatataaaaCATCTTTAACCTTACAATACTAGGTGGTCGTGT
TCTCGAGCTTGGATTCGGAATGGCAATCTCCGGATCACGTATTGAAACGT
ACAAAGTGGACGAGCACGTGATCGTTGAATGCAACGATGGAGTgttcgaa
aaattgaaagtctTTGCTAAAAATGCACCGAACAAAGTGACACCCTTGAA
AGGTAAGATAAATGTTAAACTTATTTTTGTTAGTTATTGTCATTGTACTA
TAAGAAATTCCTGAAAACTGAAGATTCAAAACAACTGACTCTTTTTTTCA
ACGAGAGATTTGCTATGATGGTAAAGGTCCCCTGTCTAAACGTCAAACCA
CATTTTATGCAAGACACTTTGAGTTATGGAAAGTCTACTATGTTTTATCG
ATTTTAACTACCCTACGATGGTATTACAAAATATACCATGCACCTAATTC
GTTAAAAACCCAGATTTGNTACCCTACGATGGTATAAAAAATATACCATG
ACCTAATTCGTTAAAAAACACAGATCTGAATTTTCAACGGCAAATCTTCA
TTGGCACGAAAAAATATcgttaatttaaaaaaaaaaatttaattttaagg
attttggCAAGATGTTGTTCCCACTTTACCTGACGCAAGTTTTGACGCCA
TTTTGTATGACACTTTTCCCTTGTCGGACGACACGTGGCATACACATCAA
TTCGAATTCATCAATGGGCATGCGCAAAGGCTACTCAAACCAGGTGGTAT
TTTGACTTATTGCAATCTAACATCATGGGGAGAAAATTTAAAAGGGCAAT
ATGATGATATCGAAAAAATGTTCCGAGAAACGCAAATTCCGAAATTGGAA
GAAGCAGgatttaaaaaggaaaatatttcttggagGCTTTTGGATATTGT
TCCAGAAAAAGAATGCAGATATTATCAATTTAACAAAATGTTGGCACCAA
CTTGTGTCAAAAAATAAACTGTATATGACCTCGTGTTAAAAGGGCACTAG
CTTTGTTAATATTGTTTGTCATTGATATCTACTCTACGTATTTTTCTTTA
TGTaactttgtatatttttttttttcatttttgacagcaaagatattctt
catttttcttaatca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032799XLOC_032799Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051799-exon-scaffold_205-1491911889:24202..24507TCONS_00051799-exon-scaffold_205-1491911889:24202..24507Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1510915933:24202..24507TCONS_00051799-exon-scaffold_205-1510915933:24202..24507Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1575043694:24202..24507TCONS_00051799-exon-scaffold_205-1575043694:24202..24507Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1491911889:30956..31162TCONS_00051799-exon-scaffold_205-1491911889:30956..31162Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1510915933:30956..31162TCONS_00051799-exon-scaffold_205-1510915933:30956..31162Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1575043694:30956..31162TCONS_00051799-exon-scaffold_205-1575043694:30956..31162Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1491911889:31677..31835TCONS_00051799-exon-scaffold_205-1491911889:31677..31835Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1510915933:31677..31835TCONS_00051799-exon-scaffold_205-1510915933:31677..31835Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1575043694:31677..31835TCONS_00051799-exon-scaffold_205-1575043694:31677..31835Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1491911889:33566..33718TCONS_00051799-exon-scaffold_205-1491911889:33566..33718Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1510915933:33566..33718TCONS_00051799-exon-scaffold_205-1510915933:33566..33718Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1575043694:33566..33718TCONS_00051799-exon-scaffold_205-1575043694:33566..33718Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1491911889:37061..37285TCONS_00051799-exon-scaffold_205-1491911889:37061..37285Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1510915933:37061..37285TCONS_00051799-exon-scaffold_205-1510915933:37061..37285Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1575043694:37061..37285TCONS_00051799-exon-scaffold_205-1575043694:37061..37285Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1491911889:40622..40817TCONS_00051799-exon-scaffold_205-1491911889:40622..40817Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1510915933:40622..40817TCONS_00051799-exon-scaffold_205-1510915933:40622..40817Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1575043694:40622..40817TCONS_00051799-exon-scaffold_205-1575043694:40622..40817Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1491911889:41142..41303TCONS_00051799-exon-scaffold_205-1491911889:41142..41303Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1510915933:41142..41303TCONS_00051799-exon-scaffold_205-1510915933:41142..41303Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1575043694:41142..41303TCONS_00051799-exon-scaffold_205-1575043694:41142..41303Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1491911889:41701..42216TCONS_00051799-exon-scaffold_205-1491911889:41701..42216Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1510915933:41701..42216TCONS_00051799-exon-scaffold_205-1510915933:41701..42216Clytia hemisphaericaexon
TCONS_00051799-exon-scaffold_205-1575043694:41701..42216TCONS_00051799-exon-scaffold_205-1575043694:41701..42216Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:24202..42216 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000833197	0.000755286	0.00225384	2.58349	1.31851e-05	2.5027e-06	0.000133875	1.20314e-06	0.00689191	1.87062e-05	0.245526	0.0724592	1.37752e-07	8.01396e-06	4.27173e-08	5.04665e-07	2.85063e-07	3.22642e-07	4.43393e-07	6.36203e-10	1.05976e-05	7.47631e-07	4.7544e-06	7.96818e-07	0.000543796	0.000180352	4.59192e-05	0.016852	7.89173e-08	2.63909e-05
Blast
[Close]
BLAST of TCONS_00051799 vs. Swiss-Prot (Human)
Match: GAMT (Guanidinoacetate N-methyltransferase OS=Homo sapiens GN=GAMT PE=1 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 9.194e-97
Identity = 139/227 (61.23%), Postives = 171/227 (75.33%), Query Frame = 1 
Query: 1090 IFDKAEDCRPEWTNAKAEFDDVDEHLVICGKPVMERWETPYMHALADIAASRGGRVLELGFGMAISGSRIETYKVDEHVIVECNDGVFEKLKVFAKNAPNKVTPLKGFWQDVVPTLPDASFDAILYDTFPLSDDTWHTHQFEFINGHAQRLLKPGGILTYCNLTSWGENLKGQYDDIEKMFRETQIPKLEEAGFKKENISWRLLDIVPEKECRYYQFNKMLAPTCVK 1770
            IF   E+C P W  A A +D  D HL I GKPVMERWETPYMHALA  A+S+GGRVLE+GFGMAI+ S+++   +DEH I+ECNDGVF++L+ +A    +KV PLKG W+DV PTLPD  FD ILYDT+PLS++TWHTHQF FI  HA RLLKPGG+LTYCNLTSWGE +K +Y DI  MF ETQ+P L EAGF++ENI   ++ +VP  +CRYY F +M+ P   K
Sbjct:    9 IFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENIRTEVMALVPPADCRYYAFPQMITPLVTK 235
The following BLAST results are available for this feature:
BLAST of TCONS_00051799 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAMT9.194e-9761.23Guanidinoacetate N-methyltransferase OS=Homo sapie... [more]
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