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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051709 ID=TCONS_00051709|Name=TCONS_00051709|organism=Clytia hemisphaerica|type=transcript|length=2581bp
TCTGTATTGGATGGAGAACCTGTGACCGTAGAGCCCTTTGTTCGTGGGGA
TTTTGttaaatatgtcaataatgaTGGAGAAATTGGTAGTAATAAAGTCA
GGAAATTACTGTATGACAAAGCAGAGGCTTTGGTTCACTTCTCATATGAA
GACAGCGATGAAAAACTAATCCTGGTTGATATTCAAGGAAGTGGGTTAAT
CCTTTACGACCCAGAAATAGCTACCTCAGATGAATTTGTTGGTGCTAATC
GAGAAAGATACTTTTGTGGAGGTAACTTGAATGAAATGGCTATGGACAGA
TTTTTTGCAGAACACAAATGTAACCTGTACTGTAAAATAGCTTCCCTAAA
GGAAGTCCGAATAGATAATGAAACAACTTCAACAGAGAAAGCTAAcgact
aaaataaataaaagtgataCATGGTTAGATTGCTGTTTTATTTGCATCTT
TTTGAGTTCGTAcctttttgcttattttttttctctactTTTCATGAATA
TCTTATTGTTTcgtaaaaagttcttttttgttAGCATTGTAAGTTTCTTA
TCCTATAGTTAGTCATAGAAACCATAAACCACTGTAACGTGCtaaagcac
tgggctcaacttcagtatatAAGTAAAAATTCCGAATCAAaagtaaacat
taaaaaaattcaaacctaAGAGTTTTATTATTTGGAATGGGGAAAGCAGT
GCAAAAGCTTCCAAAAAATATGATGAATAAAATGACATATTTTCGTCTGC
AtatacttttttcttattttgtttttgactttttcattcTTCAGATATTT
TCCAATTTGATTATCTGTCAGTTTCGTTTTTATAGGTTTTCTTCCAGAAC
AGATTTTGAGCCTTGtggcatttttttcaaaaatgacctaGAATGCTTAG
CAACCTCAGGGGTGAGGCTGAAAGTCGAGTCCTTTAATTTTAACATCTGT
GTGAAAAGCTGAGTTTTCTTGAAGTTATGTTTGGCTTTTGgccttttttt
ttagtttcttttgTTTATGCCATATTTTAGGCGTTAGAGTTTTCTcgccc
aggacattcttatcccaacccccctgcttattgatttttgaaaaatattt
cgttAACTTCCTTGTTTTGCCTCAATTCTTCTATATCAGCTCCCTTTTAG
TAAGTTTCCAcacaggacatttttattccaatccTCTGGCAATTagtttt
tgaataaatttccagaCCCTCCGTCTAGTAGCGACCTAAGAGTAGTACTA
TGTTTATATTCtgttatattatatattttcataGTTAGCTTTGAACTAGT
TATTGATTTAAAGTATAATGCTGTCTAAGGACTGGAGACGatgatttttg
tttgaattttttaactgCAAATACTTTGAAGATTTATTTGTGCTGAACAG
AGCtaagatttttatcaaaaatgaaagaatgtttgttttaactttttttc
cacagtgaaatattttatcttgtaaattttttgatatcatattttttcta
aatagtTTAgggcattcaaaaagtacgttcatCGTCCAgggtttcaacaa
aaaaaacgaaaacgcAAACGAACGGGGAATGAGTTTGTTCGCTTTTTGAG
GGGAGGTAGGATTTATTGGTTTGATAAGTAATATTTTGCTTACACATGTT
TTTTCTACCACACAGCCGATAAAATGAGACATAATCATTGagcgtacttt
ttgaatgtccCCTTCCTTTTAAACGCGGAAAATTTATAAGCCGGTCTGGT
TCATATTATAGACCAGAAAGGGTGGTCTGTAGTTGGTCACCGGAAcacat
ttttgtttcattttaacCACTGTAAATATTCTTAAAGTTTTATGTATTGT
TAAAACGTATTAGCTTACTAAATgcactttctattttttcttccACCCCC
TGTTTCCAAACAGTTGTACACGGTAAATTACATTTCCTAGGCCTCAGTCT
CTAATTGCTGTTTTCATATGGAAAACACTTTCTATAGGCACGGTTGTGTA
TTGAAAATGAGGCTTTTTTTATTAGGGGCAGTTTAAAACTGGGGGACTGT
AGAAGGCCTTGAATTTTGGCAGATTTCGCGGTTTTTCCAAAATCCGTCAA
ATAAAAATCTCgccaatattatttttttccgtcatgcgccaaattaaatt
ccccaAAATTTAATACTTTTTGCCAAGATTTGTAAAATAATAGTATAAGA
ACTAGAAAGAGAAGACACTTTTCACGACTCCCCAGTTATAGCAAAGATTT
CctaatttgtttaaaaaatccagtggacTTGTTGGGAAAACATCAAAAAG
CAGACAATTCGACCCGCCGCCGGGGGGACGACGAAGTTTgacatattctt
ataaaaaattgggTGTATCCCACTGATCCCACCCCCTgcttcatagtgtc
ctccccccccctttataaggGGGggaccaattttccaattttgaatgaGT
GAGGGgggaatgaaaatttgaatagtaaaggggggggGAAAGAGGGGGAa
aaacatcgatagttggcaaatttggtggggggaagtgtgaaatcacttca
attttatctcagtaaccaaggtcagtccaca Run BLAST on NCBI protein sequence of TCONS_00051709-protein >TCONS_00051709-protein ID=TCONS_00051709-protein|Name=TCONS_00051709-protein|organism=Clytia hemisphaerica|type=polypeptide|length=133bp
SVLDGEPVTVEPFVRGDFVKYVNNDGEIGSNKVRKLLYDKAEALVHFSYE
DSDEKLILVDIQGSGLILYDPEIATSDEFVGANRERYFCGGNLNEMAMDR
FFAEHKCNLYCKIASLKEVRIDNETTSTEKAND Run BLAST on NCBI transcript from alignment at scaffold_202:728696..731276 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051709 ID=TCONS_00051709|Name=TCONS_00051709|organism=Clytia hemisphaerica|type=transcript|length=2581bp|location=Sequence derived from alignment at scaffold_202:728696..731276 (Clytia hemisphaerica)
tgtggactgaccttggttactgagataaaattgaagtgatttcacacttc
cccccaccaaatttgccaactatcgatgttttTCCCCCTCTTTCcccccc
cctttactattcaaattttcattcccCCCTCACtcattcaaaattggaaa
attggtccCCCccttataaagggggggggaggacactatgaagcAGGGGG
TGGGATCAGTGGGATACAcccaattttttataagaatatgtcAAACTTCG
TCGTCCCCCCGGCGGCGGGTCGAATTGTCTGCTTTTTGATGTTTTCCCAA
CAAgtccactggattttttaaacaaattagGAAATCTTTGCTATAACTGG
GGAGTCGTGAAAAGTGTCTTCTCTTTCTAGTTCTTATACTATTATTTTAC
AAATCTTGGCAAAAAGTATTAAATTTtggggaatttaatttggcgcatga
cggaaaaaaataatattggcGAGATTTTTATTTGACGGATTTTGGAAAAA
CCGCGAAATCTGCCAAAATTCAAGGCCTTCTACAGTCCCCCAGTTTTAAA
CTGCCCCTAATAAAAAAAGCCTCATTTTCAATACACAACCGTGCCTATAG
AAAGTGTTTTCCATATGAAAACAGCAATTAGAGACTGAGGCCTAGGAAAT
GTAATTTACCGTGTACAACTGTTTGGAAACAGGGGGTggaagaaaaaata
gaaagtgcATTTAGTAAGCTAATACGTTTTAACAATACATAAAACTTTAA
GAATATTTACAGTGgttaaaatgaaacaaaaatgtgTTCCGGTGACCAAC
TACAGACCACCCTTTCTGGTCTATAATATGAACCAGACCGGCTTATAAAT
TTTCCGCGTTTAAAAGGAAGGggacattcaaaaagtacgctCAATGATTA
TGTCTCATTTTATCGGCTGTGTGGTAGAAAAAACATGTGTAAGCAAAATA
TTACTTATCAAACCAATAAATCCTACCTCCCCTCAAAAAGCGAACAAACT
CATTCCCCGTTCGTTTgcgttttcgttttttttgttgaaacccTGGACGa
tgaacgtactttttgaatgcccTAAactatttagaaaaaatatgatatca
aaaaatttacaagataaaatatttcactgtggaaaaaaagttaaaacaaa
cattctttcatttttgataaaaatcttaGCTCTGTTCAGCACAAATAAAT
CTTCAAAGTATTTGcagttaaaaaattcaaacaaaaatcatCGTCTCCAG
TCCTTAGACAGCATTATACTTTAAATCAATAACTAGTTCAAAGCTAACta
tgaaaatatataatataacaGAATATAAACATAGTACTACTCTTAGGTCG
CTACTAGACGGAGGGtctggaaatttattcaaaaactAATTGCCAGAgga
ttggaataaaaatgtcctgtgTGGAAACTTACTAAAAGGGAGCTGATATA
GAAGAATTGAGGCAAAACAAGGAAGTTaacgaaatatttttcaaaaatca
ataagcaggggggttgggataagaatgtcctgggcgAGAAAACTCTAACG
CCTAAAATATGGCATAAAcaaaagaaactaaaaaaaaaggcCAAAAGCCA
AACATAACTTCAAGAAAACTCAGCTTTTCACACAGATGTTAAAATTAAAG
GACTCGACTTTCAGCCTCACCCCTGAGGTTGCTAAGCATTCtaggtcatt
tttgaaaaaaatgccaCAAGGCTCAAAATCTGTTCTGGAAGAAAACCTAT
AAAAACGAAACTGACAGATAATCAAATTGGAAAATATCTGAAgaatgaaa
aagtcaaaaacaaaataagaaaaaagtataTGCAGACGAAAATATGTCAT
TTTATTCATCATATTTTTTGGAAGCTTTTGCACTGCTTTCCCCATTCCAA
ATAATAAAACTCTtaggtttgaatttttttaatgtttacttTTGATTCGG
AATTTTTACTTatatactgaagttgagcccagtgctttaGCACGTTACAG
TGGTTTATGGTTTCTATGACTAACTATAGGATAAGAAACTTACAATGCTa
acaaaaaagaactttttacgAAACAATAAGATATTCATGAAAagtagaga
aaaaaaataagcaaaaaggTACGAACTCAAAAAGATGCAAATAAAACAGC
AATCTAACCATGtatcacttttatttattttagtcgTTAGCTTTCTCTGT
TGAAGTTGTTTCATTATCTATTCGGACTTCCTTTAGGGAAGCTATTTTAC
AGTACAGGTTACATTTGTGTTCTGCAAAAAATCTGTCCATAGCCATTTCA
TTCAAGTTACCTCCACAAAAGTATCTTTCTCGATTAGCACCAACAAATTC
ATCTGAGGTAGCTATTTCTGGGTCGTAAAGGATTAACCCACTTCCTTGAA
TATCAACCAGGATTAGTTTTTCATCGCTGTCTTCATATGAGAAGTGAACC
AAAGCCTCTGCTTTGTCATACAGTAATTTCCTGACTTTATTACTACCAAT
TTCTCCAtcattattgacatatttaaCAAAATCCCCACGAACAAAGGGCT
CTACGGTCACAGGTTCTCCATCCAATACAGA Coding sequence (CDS) from alignment at scaffold_202:728696..731276 >TCONS_00051709 ID=TCONS_00051709|Name=TCONS_00051709|organism=Clytia hemisphaerica|type=CDS|length=402bp|location=Sequence derived from alignment at scaffold_202:728696..731276 (Clytia hemisphaerica)
ttagtcgTTAGCTTTCTCTGTTGAAGTTGTTTCATTATCTATTCGGACTT
CCTTTAGGGAAGCTATTTTACAGTACAGGTTACATTTGTGTTCTGCAAAA
AATCTGTCCATAGCCATTTCATTCAAGTTACCTCCACAAAAGTATCTTTC
TCGATTAGCACCAACAAATTCATCTGAGGTAGCTATTTCTGGGTCGTAAA
GGATTAACCCACTTCCTTGAATATCAACCAGGATTAGTTTTTCATCGCTG
TCTTCATATGAGAAGTGAACCAAAGCCTCTGCTTTGTCATACAGTAATTT
CCTGACTTTATTACTACCAATTTCTCCAtcattattgacatatttaaCAA
AATCCCCACGAACAAAGGGCTCTACGGTCACAGGTTCTCCATCCAATACA
GA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051709-exon-scaffold_202-1491911889:728696..731276 | TCONS_00051709-exon-scaffold_202-1491911889:728696..731276 | Clytia hemisphaerica | exon |
| TCONS_00051709-exon-scaffold_202-1510915933:728696..731276 | TCONS_00051709-exon-scaffold_202-1510915933:728696..731276 | Clytia hemisphaerica | exon |
| TCONS_00051709-exon-scaffold_202-1575043694:728696..731276 | TCONS_00051709-exon-scaffold_202-1575043694:728696..731276 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:728696..731276 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004674 |
protein serine/threonine kinase activity |
Blast
The following BLAST results are available for this feature:
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