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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051470 ID=TCONS_00051470|Name=TCONS_00051470|organism=Clytia hemisphaerica|type=transcript|length=889bp
TTCCAGTTTAAAGCatgcaattttcattcaaaagttcTCATTTATATCCA
aagattcgcgaaagtttctgctcgcgaaagtttgtacgcctaaaataCAT
GCACTACTGTATGTCATACTACCATGGAAAGAGCATGACAAATGCGTCTT
CAAGTGTACCGGAGGCTCTTTAATTAGTTACGATAATCTTAGATTTAAAT
CATTAGAATTTGCATCCAACGTATTATGTGGATCAGATGGTGACTTACAA
GCAAGCTTTTTCCAAGAATTGATTGACATATTCTAATGTTCTAATGAAGA
AAATCCACCATCATTgacttctaataaaaaaagggttttccctTTACCTT
ACTTTATACTAATAAAGCACCAAATTATCTGCACGTTTATCATCAATGTC
TGGTGACGCCAGAACAAAGTTCTTATAATATTGCTTCGAAATCACATTAT
GTTTCTCTTGGGATTCGTTTAAAGAAGATCTTTCCCGGCTGACGGTAAAG
CTATTCTCGCAGCGACTTTCTCGGCGAATTTATAGAGCAACTTTGAAGAG
CTATTGAAGATAGAGGAATGCATATTTTTAGCCCAAATAACTTTTAACGT
TACATTCAATGTCTCCTCTTTTCATCACATAAATAAAATTATGAAGTCGC
CGCTTTAGATATCCAACAAATCTCTTTACAATGGAAGATGGTAAAATATC
GtggttttcttcaatttcttcttcgtttttcttttgGCGTTCCGTCGCTT
GATATGTATCGTCGAGTGTGCTTCATTTCTGAactgtgaaagaaaaaagt
acgATAAAATGTTAAATCCTCGCGAAGTAATCACTTGTTAAAGATTTTAG
TCCGAAGTTTCCTTCATTCCGAAGTTTCCCCGACCTACG Run BLAST on NCBI transcript from alignment at scaffold_201:606204..607092 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051470 ID=TCONS_00051470|Name=TCONS_00051470|organism=Clytia hemisphaerica|type=transcript|length=889bp|location=Sequence derived from alignment at scaffold_201:606204..607092 (Clytia hemisphaerica)
CGTAGGTCGGGGAAACTTCGGAATGAAGGAAACTTCGGACTAAAATCTTT
AACAAGTGATTACTTCGCGAGGATTTAACATTTTATcgtacttttttctt
tcacagtTCAGAAATGAAGCACACTCGACGATACATATCAAGCGACGGAA
CGCcaaaagaaaaacgaagaagaaattgaagaaaaccaCGATATTTTACC
ATCTTCCATTGTAAAGAGATTTGTTGGATATCTAAAGCGGCGACTTCATA
ATTTTATTTATGTGATGAAAAGAGGAGACATTGAATGTAACGTTAAAAGT
TATTTGGGCTAAAAATATGCATTCCTCTATCTTCAATAGCTCTTCAAAGT
TGCTCTATAAATTCGCCGAGAAAGTCGCTGCGAGAATAGCTTTACCGTCA
GCCGGGAAAGATCTTCTTTAAACGAATCCCAAGAGAAACATAATGTGATT
TCGAAGCAATATTATAAGAACTTTGTTCTGGCGTCACCAGACATTGATGA
TAAACGTGCAGATAATTTGGTGCTTTATTAGTATAAAGTAAGGTAAaggg
aaaaccctttttttattagaagtcAATGATGGTGGATTTTCTTCATTAGA
ACATTAGAATATGTCAATCAATTCTTGGAAAAAGCTTGCTTGTAAGTCAC
CATCTGATCCACATAATACGTTGGATGCAAATTCTAATGATTTAAATCTA
AGATTATCGTAACTAATTAAAGAGCCTCCGGTACACTTGAAGACGCATTT
GTCATGCTCTTTCCATGGTAGTATGACATACAGTAGTGCATGtattttag
gcgtacaaactttcgcgagcagaaactttcgcgaatcttTGGATATAAAT
GAgaacttttgaatgaaaattgcatGCTTTAAACTGGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051470-exon-scaffold_201-1491911889:606204..607092 | TCONS_00051470-exon-scaffold_201-1491911889:606204..607092 | Clytia hemisphaerica | exon |
| TCONS_00051470-exon-scaffold_201-1510915933:606204..607092 | TCONS_00051470-exon-scaffold_201-1510915933:606204..607092 | Clytia hemisphaerica | exon |
| TCONS_00051470-exon-scaffold_201-1575043694:606204..607092 | TCONS_00051470-exon-scaffold_201-1575043694:606204..607092 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_201 | supercontig | scaffold_201:606204..607092 . |
Blast
The following BLAST results are available for this feature:
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