|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051466 ID=TCONS_00051466|Name=TCONS_00051466|organism=Clytia hemisphaerica|type=transcript|length=946bp
TTGCAATTTATTAAGTGCTTATTTTAACTtcctgaaaaaagtagaacatt
CCAGTCAGCCAACGTGGTACGTTTCGAAAGCTAAACTATTATTACGgggg
aaaatgtaaaaaaattcaggcCGATAGCTGACTTGGGTGGCTAGCGCTTG
TTCTATTTGCGTCACCCGCCCAGCCGCATcatattttccgctgattttcc
ggtgcagAGACGCGGAAAAatatctgggaaaagcaatttgttctctttta
aagtatagcttttttcttaaTCGCTCTGGcagccatcgaaaaattgttta
gtTTGCGTCACCACCCGCCCCCGAATTACTGGCGTGATTTAAAAAACCCG
GGAATTTTTTGGACTGCCTGttcgcccgcatgcatttttaacacccgttg
cgacgcgaacagagcaatTTTTCAATGGTCGCCTTAGTCGACATTAATCA
ACATTGGGGATAGGATGGCAtggtcaactatcaatcgaaccaatctaacc
ttactcgaacgcaatcgaatattacccatgaattggccgttcgattgaga
ttcaaaTACGTTTGActatcgaatcgcaattatttgaTCATGTTCAATTA
TggttgattggttcgattgtgatttttgtttGCAGTTGTTCGATTAACAC
CGCCTGGCTTTGTCAGTCGAGTTCAACATATCCGCATGTTTTAGTCACGT
GGCTGACAGACTGAAGCGACACTAAAACAACACAGGGGGGGGTAAGTGTC
AAATTAAAGATCAAATcgtaaaatcaaattaaaaaagtaaaaaatattac
ctacctttgattacctttgatgtgtttcagcaaattctctgctcactcaa
cccgtggggtccggtgtttgaccatttcaacaattgaattcgAGTCAGCC
ATCCTATAAGTGCATGATGGGTATACCCCTCATTCAAATcaaggaa Run BLAST on NCBI transcript from alignment at scaffold_201:560583..561528 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051466 ID=TCONS_00051466|Name=TCONS_00051466|organism=Clytia hemisphaerica|type=transcript|length=946bp|location=Sequence derived from alignment at scaffold_201:560583..561528 (Clytia hemisphaerica)
ttccttgATTTGAATGAGGGGTATACCCATCATGCACTTATAGGATGGCT
GACTcgaattcaattgttgaaatggtcaaacaccggaccccacgggttga
gtgagcagagaatttgctgaaacacatcaaaggtaatcaaaggtaggtaa
tattttttacttttttaatttgattttacgATTTGATCTTTAATTTGACA
CTTACCCCCCCCTGTGTTGTTTTAGTGTCGCTTCAGTCTGTCAGCCACGT
GACTAAAACATGCGGATATGTTGAACTCGACTGACAAAGCCAGGCGGTGT
TAATCGAACAACTGCaaacaaaaatcacaatcgaaccaatcaaccATAAT
TGAACATGAtcaaataattgcgattcgatagTCAAACGTAtttgaatctc
aatcgaacggccaattcatgggtaatattcgattgcgttcgagtaaggtt
agattggttcgattgatagttgaccaTGCCATCCTATCCCCAATGTTGAT
TAATGTCGACTAAGGCGACCATTGAAAAattgctctgttcgcgtcgcaac
gggtgttaaaaatgcatgcgggcgaaCAGGCAGTCCAAAAAATTCCCGGG
TTTTTTAAATCACGCCAGTAATTCGGGGGCGGGTGGTGACGCAAactaaa
caatttttcgatggctgCCAGAGCGAttaagaaaaaagctatactttaaa
agagaacaaattgcttttcccagatatTTTTCCGCGTCTctgcaccggaa
aatcagcggaaaatatgATGCGGCTGGGCGGGTGACGCAAATAGAACAAG
CGCTAGCCACCCAAGTCAGCTATCGgcctgaatttttttacattttcccc
CGTAATAATAGTTTAGCTTTCGAAACGTACCACGTTGGCTGACTGGaatg
ttctacttttttcaggaAGTTAAAATAAGCACTTAATAAATTGCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051466-exon-scaffold_201-1491911889:560583..561528 | TCONS_00051466-exon-scaffold_201-1491911889:560583..561528 | Clytia hemisphaerica | exon |
| TCONS_00051466-exon-scaffold_201-1510915933:560583..561528 | TCONS_00051466-exon-scaffold_201-1510915933:560583..561528 | Clytia hemisphaerica | exon |
| TCONS_00051466-exon-scaffold_201-1575043694:560583..561528 | TCONS_00051466-exon-scaffold_201-1575043694:560583..561528 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_201 | supercontig | scaffold_201:560583..561528 . |
Blast
The following BLAST results are available for this feature:
|
