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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051458 ID=TCONS_00051458|Name=TCONS_00051458|organism=Clytia hemisphaerica|type=transcript|length=1023bp
attttgattcctATAAATTGGCAACAGGGTGATTATCACATTTTTGATAT
TTATCGCTCTGACTGTATCTTTTTGGGGTATTCTATCAGGTACTCCATGG
ATGGGCTTAATGTTTTACAACTAACCTATCAGTATCAGACACCTTCTTTC
TTCAGTCATTATTGAAACTGATTCAAAACTATCCTCCTTGGGTGAGCCAA
ATTAGGTGTTAGACCCTTCAATTTGCAAATAACCTTTTTTTTATGCATCA
AAATTGTGAATAAGATCACTTCTAGAGTAGAACAAACTGTATGTAttgag
tattttttgaaaactcaaatatAGGACCTTGAGACTCTGAGAGCTGTTTC
TTTTAGAAATGATTTGGAATAAATCTAATGAGTGGACAAATTAATTAATT
GTATTCATTCATGTAGTAAGCACTTCACCATATGCATATTGTTTTAGGAT
TTAtaatatttataaaattattttgattttacacTTTCATTTTAATTAGG
GCTTGTTCAGAAATAACTAGTTCAAAGATCACTAAAAGGTGATGGATATT
CATGTCAAATTTCTTGGTGTTAGGATAAGATAGGAAATCTTAGTAATGGT
AGCAGATGGTAGAGGTAGTTTAAAAACATTTATGAATGATTTACTTAGTT
TTTGCTTTTGGGATATTTTCACAAACTATTTGATCCAAACACTTTAACCC
AACCCTGCTAATTGAAAGTAAGGATCAATCTTTTCTAAGGTCAACATAAT
TTTTGACTGGCTATTCTAACAgcaacaatttttcaaaacacaTAACCAGG
CTTTATTCCTTTTGTTTCCTTTGTTCCCTGTCAAATATCTGAAGTTATTG
TGGACAGATATGTTGTGCACAAACTGACAAAAGCAAGAAACTTATCAGCA
CAGAAATTACACGTGCACGAAGATTATGTTTTAGTTGTGCTGATATGTAA
TTTCAAAAGATGCACAGATAGATATTTTGACTCTTTAAAGTAGAGATGTA
GGGCAGTGTCTTTTTACATCAAT Run BLAST on NCBI transcript from alignment at scaffold_201:461250..462272 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051458 ID=TCONS_00051458|Name=TCONS_00051458|organism=Clytia hemisphaerica|type=transcript|length=1023bp|location=Sequence derived from alignment at scaffold_201:461250..462272 (Clytia hemisphaerica)
ATTGATGTAAAAAGACACTGCCCTACATCTCTACTTTAAAGAGTCAAAAT
ATCTATCTGTGCATCTTTTGAAATTACATATCAGCACAACTAAAACATAA
TCTTCGTGCACGTGTAATTTCTGTGCTGATAAGTTTCTTGCTTTTGTCAG
TTTGTGCACAACATATCTGTCCACAATAACTTCAGATATTTGACAGGGAA
CAAAGGAAACAAAAGGAATAAAGCCTGGTTAtgtgttttgaaaaattgtt
gcTGTTAGAATAGCCAGTCAAAAATTATGTTGACCTTAGAAAAGATTGAT
CCTTACTTTCAATTAGCAGGGTTGGGTTAAAGTGTTTGGATCAAATAGTT
TGTGAAAATATCCCAAAAGCAAAAACTAAGTAAATCATTCATAAATGTTT
TTAAACTACCTCTACCATCTGCTACCATTACTAAGATTTCCTATCTTATC
CTAACACCAAGAAATTTGACATGAATATCCATCACCTTTTAGTGATCTTT
GAACTAGTTATTTCTGAACAAGCCCTAATTAAAATGAAAgtgtaaaatca
aaataattttataaatattaTAAATCCTAAAACAATATGCATATGGTGAA
GTGCTTACTACATGAATGAATACAATTAATTAATTTGTCCACTCATTAGA
TTTATTCCAAATCATTTCTAAAAGAAACAGCTCTCAGAGTCTCAAGGTCC
TatatttgagttttcaaaaaatactcaaTACATACAGTTTGTTCTACTCT
AGAAGTGATCTTATTCACAATTTTGATGCATAAAAAAAAGGTTATTTGCA
AATTGAAGGGTCTAACACCTAATTTGGCTCACCCAAGGAGGATAGTTTTG
AATCAGTTTCAATAATGACTGAAGAAAGAAGGTGTCTGATACTGATAGGT
TAGTTGTAAAACATTAAGCCCATCCATGGAGTACCTGATAGAATACCCCA
AAAAGATACAGTCAGAGCGATAAATATCAAAAATGTGATAATCACCCTGT
TGCCAATTTATaggaatcaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051458-exon-scaffold_201-1491911889:461250..462272 | TCONS_00051458-exon-scaffold_201-1491911889:461250..462272 | Clytia hemisphaerica | exon |
| TCONS_00051458-exon-scaffold_201-1510915933:461250..462272 | TCONS_00051458-exon-scaffold_201-1510915933:461250..462272 | Clytia hemisphaerica | exon |
| TCONS_00051458-exon-scaffold_201-1575043694:461250..462272 | TCONS_00051458-exon-scaffold_201-1575043694:461250..462272 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_201 | supercontig | scaffold_201:461250..462272 . |
Blast
The following BLAST results are available for this feature:
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