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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051392 ID=TCONS_00051392|Name=TCONS_00051392|organism=Clytia hemisphaerica|type=transcript|length=597bp
ttgttgataaatttcaaaCAGCTATGATTTGTGATAAATTGTGgctatca
aaaaaagaaaaaaatcccaAAAGAGGAATATACTAATTTTTTTGTTCCGA
AAAGAACGAAGTCTGTAGTGTAATTGAGCAGCGTTTAAAAAGCGTTTGAA
CTGTGTGAAAAAATGCGGCTAATTTTCACTGCGGCTAACCATGCAAAGCT
CACTTGAAAGCCCTATAACTTCTTTACGGATGAGGGAAGCAAGTCAAGAT
TTCGGGGATACCCTGGTAAAGGACTGGAGAAACCATATCTGTGAAGAAAT
GTGGCTCAAGTCAttaaatttgaTGTCGCTGTTTAATCATTAAGGTCTTT
GGCAAAATTTAGCCACATTTTTTCCCTCAAAATGACTATCAAGACTTTTC
AATTGAGTTTGTTTAATTGTGGAAGGTTTAAAAATACTTTATATGacaaa
tttctcatcttttgaaCTTGTTTTAATAGTAAATCATAGCGTCATCTTAT
TTATGTTgtatttttagtgattttttactaattttggataattttagATA
CTAGAGAGTTCGAGTACTTTAGCCACATTTTAACCCATATTCTACAC Run BLAST on NCBI transcript from alignment at scaffold_201:636295..639414+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051392 ID=TCONS_00051392|Name=TCONS_00051392|organism=Clytia hemisphaerica|type=transcript|length=3120bp|location=Sequence derived from alignment at scaffold_201:636295..639414+ (Clytia hemisphaerica)
ttgttgataaatttcaaaCAGCTATGATTTGTGATAAATTGTGgctatca
aaaaaagaaaaaaatcccaAAAGAGGAATATACTAATTTTTTTGTTCCGA
AAAGAACGAAGTCTGTAGTGTAATTGAGCAGCGTTTAAAAAGCGTTTGAA
CTGTGTGAAAAAATGCGGCTAATTTTCACTGCGGCTAACCATGCAAAGCT
CACTTGAAAGCCCTATAACTTCTTTACGGATGAGGGAAGCAAGTCAAGAT
TTCGGGGATACCCTGGTAAAGGACTGGAGAAACCATATCTGTGAAGAAAT
GTGGCTCAAGTCAttaaatttgtgagtatttgtggtttatttttgaaaaa
caatatcCTTTGACAAAAAGCATGTTTTACNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAAGTGATAAAATGTG
GTTTTCTATGATAAACAGGTGTTTTTAACAAAAACCACTATCTTTCCCAG
AATCCTGCCAGAGCTAAAAGTTAATTTTTGCACATAATAGGatctaatat
ttttttacatattaaaTCAACTGTATTTATGGTGTTAAAAGTGATTATAT
GTGGCtaatttaacatatttttacaagctacatttctttaaaattggaaa
cattattATCCTGACTTTACTTTTAGAAACCTTGGTTTGTCAAGGGATTG
TGAGAAAGTAAATTCTTATCATATTTTGTGAATGTAGGTGGCTACTTTAA
CGTGACTGCAAATATATTCTCTCTACCTATAAACCTTAGTGAAAATGTGT
GGTTTTTCATCAAAAAATGATGTTTTTCAATAAAAACCACAAATTCTCCC
AGAATCTTACAAGCTTAAAGGTTCAATTAAAACCAAATAAGAATCACATA
ACATTTTTGCAGCAATGCACAcaatttattttaataaaagtGATTAAGTG
TGGCTAAAATTGAATATTCTTACANCACAcaatttattttaataaaagtG
ATTAAGTGTGGCTAAAATTTAATATTCTTACAAGCCGGTTTGAAGGCATC
TATTAGTttagaattggaaacattactATGCTGACTGGtacttttagaaa
cttttgttttACGTTTGTCAAAGGATTTGAGGAAGTAAATTCTTATTCCA
TTTTGTGAATTTAAGTGGCTACTTTGATCCACATATAATTATTTATATTC
TCATTAACATAACTCTGACAATTTAATTTTCTCAGCAAAAAGTATTGAGT
AGAATTGtagaattttcagaattttcagctttagccacactttttcactt
tatttttattctagtgatatgattttttaaaatcattttaaaaagacaat
ttcTATTCCAAtcatttctgataatttttttgtttttatttcaggaTGTC
GCTGTTTAATCATTAAGGTCTTTGGCAAAATTTAGCCACATTTTTTCCCT
CAAAATGACTATCAAGACTTTTCAATTGAGTTTGTTTAATTGTGGAAGGT
TTAAAAATACTTTATATGacaaatttctcatcttttgaaCTTGTTTTAAT
AGTAAATCATAGCGTCATCTTATTTATGTTgtatttttagtgatttttta
ctaattttggataattttagATACTAGAGAGTTCGAGTACTTTAGCCACA
TTTTAACCCATATTCTACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051392-exon-scaffold_201-1491911889:636295..636615 | TCONS_00051392-exon-scaffold_201-1491911889:636295..636615 | Clytia hemisphaerica | exon |
| TCONS_00051392-exon-scaffold_201-1510915933:636295..636615 | TCONS_00051392-exon-scaffold_201-1510915933:636295..636615 | Clytia hemisphaerica | exon |
| TCONS_00051392-exon-scaffold_201-1575043694:636295..636615 | TCONS_00051392-exon-scaffold_201-1575043694:636295..636615 | Clytia hemisphaerica | exon |
| TCONS_00051392-exon-scaffold_201-1491911889:639139..639414 | TCONS_00051392-exon-scaffold_201-1491911889:639139..639414 | Clytia hemisphaerica | exon |
| TCONS_00051392-exon-scaffold_201-1510915933:639139..639414 | TCONS_00051392-exon-scaffold_201-1510915933:639139..639414 | Clytia hemisphaerica | exon |
| TCONS_00051392-exon-scaffold_201-1575043694:639139..639414 | TCONS_00051392-exon-scaffold_201-1575043694:639139..639414 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_201 | supercontig | scaffold_201:636295..639414 + |
Blast
The following BLAST results are available for this feature:
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