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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051294 ID=TCONS_00051294|Name=TCONS_00051294|organism=Clytia hemisphaerica|type=transcript|length=1521bp
agaGAGTGTATTTCAGTTCACGTTGGACAAGCTGGTGTCCAAATCGGAAA
CGCTTGTTGGGAATTGTACTGTTTGGAACATGGAATCCAACCTGATGGTG
AAATGTCTTCAGACACAACCACCAATGACTCGCTTTCCACTTTCTTCAGC
GAGACGGGGACTGGCAAACGTGTCCCCAGAGCTGTCTTTGTTGACTTAGA
ACCTGCAGTCATTGatGAAGTGCGTTCCGGTACATACCGTTCACTTTTTC
ATCCGGAACAATTGATCACCGGAAAAGAAGATGCCGCAAACAATTACGCT
AGAGGACATTATACCGTCGGGAAGGAGTATATTGATCAAACATTGGATCG
AATCCGCAAATTATGCGATCTTTGCACCGGTCTTCAGGGGTTCTTGATTT
TTCATTCGTACGGAGGAGGAACTGGGTCCGGCTTCACATCCCTTCTCATG
GAACGTTTATCAGTGGAATATGGAAAGAAAGCTAAGCTAGAATTTTCTAT
CTACCCTTCTCCAAAAGTTTCCACCGCTGTCGTTGAACCTTACAATGCTA
TTCTTACAACCCACACTACCTTGGAGCACTCAGATGTCGCTTTCATGGTT
GATAATGAAGCTATCTACGATATTTGCAAACGTAATTTAAGTGTTGATCG
TCCATCATATTTCAATCTGAACCGTTTGATTGGTCAAGTGGTTTCCTCTG
TTACAGCTTCCTTGAGATTCGAAGGAGCTTTAAACGTCGATCTGAATGAG
TTCCAAACAAACTTGGTCCCATACCCCAGAATCCATTTCCCAATTACGTC
ATTTGGTCCTATCATGTCAGCTGAAAAAGCGTCTCACGAAAATCATAATG
TCCAAGAAATCACCAATGCTTGTTTTGAACCACAGAATCAAATGGTGAAA
TGCGATCCTCGACATGGGAAATACATGGCTTGTTGTCTTCTATACCGTGG
CGAAATCGTCCCCAAAGATGTCAACACCGCAATTGCTCAAATCAAGACCA
AACGAACCATCCAGTTTGTGAATTGGTGCCCAACTGGATTTAAAGTTGGG
ATCAATAACAATGCCCCTGTCGTTGTTCCTGGAGGTGATTTAGCTCAAGT
CAAGAGGGCTGTTTGTTCCTTAGCTAATACGACTGCTATTGCTGAAGCCT
GGTCAAGTCTCGATCATAAGTTCGATTTGATGTATGCTAAACGTGCTTTT
GTACATTGGTATGTCGGTGAAGGTATGGAAGAAGGAGAGTTCTCAGAAGC
TCGTGAAGACATGGCCGCTTTGGAGAAAGATTACGAAGAAGTTGGAATGG
ATAGTGGTGACGCTGATGAAGCCGAAGATGATGAATATTAAATGCGAAGG
AGCCAAAGACCAAATATGGAATTGCATGCTTGAAAATGCTCTCCGTCACA
TTGACTATTTAATAAGAATTTGCTACCATCGTGCCGTctgaagttttttt
catttatcattttTGCCATTATTTAATGAACGAGGAGAATAATATTTCAT
TCATTCAAACTATAAATAACG Run BLAST on NCBI transcript from alignment at scaffold_200:128050..138479+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051294 ID=TCONS_00051294|Name=TCONS_00051294|organism=Clytia hemisphaerica|type=transcript|length=10430bp|location=Sequence derived from alignment at scaffold_200:128050..138479+ (Clytia hemisphaerica)
agaGAGTGTATTTCAGTTCACGTTGGACAAGCTGGTGTCCAAATCGGAAA
CGCTTGTTGGGAATTGTACTGTTTGGAACATGGAATCCAACCTGATGGTG
AAATGTCTTCAGACACAACCACCAATGACTCGCTTTCCACTTTCTTCAGC
GAGACGGGGACTGGCAAACGTGTCCCCAGAGCTGTCTTTGTTGACTTAGA
ACCTGCAGTCATTGGTAAGTGATattcaaaaagatttgaaatgaTTATGC
TTAAATCATTTTAGAACAAGATCCTATGTGTAATAcggtcaactctctct
aattcgaatctctattattcgaatatttctgtaatttgaacaaAAACAAG
ATGCTTTCATTTTTCACCACACTCTCctctaaaattacaaaataagattt
agttattttccttcaaaaatacacaaTGGACAGTTTTCATTCTACCTGTC
ATGGTCTCCTGTTCACATTGCACTATTCCGTTATCTCCTTCATAATTTTC
CATGTTCAAAAACGATATGCTCAATTACGAATGATCCCAAACcaataaaa
acttttcattaTTTCTCACTAAAAGTCTTACACACATTTATAACAACTCT
AATTTAAATTTCACATATTCGATACTTTTTTTAGGCTCGTCATGCTAACA
CGAATTATTTATTTAATGATAGATCTCAATCTCATATCATCTTTGGAGAT
TCCGCGACCACATGCTAAATTATGTTTGAGTTGTCCACAAGCTCCTATGC
TCTCAAGGTTCCAAATATTAAAACGATATATTTAATTATGAATAATCATG
ATTtgcatataaaaatatttttcgtactCCATTACCACATTTTCTCGCTA
AAAATATGCAACATGACCCAAATTCATCTATCATATTTATGGATTGATGA
ACATATATGGATTGACAAGTTTGacacattttccttcaaaaatacacgaT
GGCCTTTTTCATAATATTATTAGCCTTCTCacatgaatttatttttttat
cacaCCTTCCTTCAAATATACAAAATaagtataaaaaaattctacacatt
ttccttcaagaatacacaATCGATAGTTTTCTTTTAATTGTCTGCATTAT
TACGTGATTTCCTccataacttttcaaaaatctaagaTAGTGGGTTTCAG
CCGAACTAATATCTTACTAACCCATAACCACTTTTATCCATGACAACTAC
TTTAGCTTTTCTCGATGTGCACGACCCGCAAACCTCATAAATTTCGGTTA
CATGCAGGATAACCCCTTCATGATACCGGTTTTTATGATGGTTTTTTTTA
ATGTGAGGTTACCTCTGTTTGATCTGTTTAATTGGATTCAGCATGACTTA
TTCACCTCAAACTTACTGATTTATAATCGAGTGTCTGGTTTTTTTCCTCA
AACATTATACACTACTAGAAGAACCAGTTCTCCATTTTTAGGTGAACCTT
ACACATGAACCTTTTTCAAGtcttaatgaaaattttcatcttttaatatg
ttttattatatagatGAAGTGCGTTCCGGTACATACCGTTCACTTTTTCA
TCCGGAACAATTGATCACCGGAAAAGAAGATGCCGCAAACAATTACGCTA
GAGGACATTATACCGTCGGTGAGAATTAAATCTTTTTATCCTTTAAGAAT
GATGTCAAGTTTTCTATCTCTTTCAGCTAAAATCAACAAATAACGAATTT
CAAACTCTCTATACTCATCCAGGGTAAAAGAACACAAAAAATCCATCTAT
TGATTCTACCTAAAAGAGTGAATCTAGAATTAGTCAAAAAGAGCGAGTGC
CatcctttttttctaaaatctgaGTCGTTGAATACTCAAATAAATGAGCA
GGTCGAGTTTGCTAAGTCCATTGAGGAATTCTCTGATATATTCACATCTT
AGGGAAGGAGTATATTGATCAAACATTGGATCGAATCCGCAAATTATGCG
ATCTTTGCACCGGTCTTCAGGGGTTCTTGATTTTTCATTCGTACGGAGGA
GGAACTGGGTCCGGCTTCACATCCCTTCTCATGGAACGTTTATCAGTGGA
ATATGGAAAGAAAGCTAAGCTAGAATTTTCTATCTACCCTTCTCCAAAAG
TTTCCACCGCTGTCGTTGAACCTTACAATGCTATTCTTACAACCCACACT
ACCTTGGAGCACTCAGATGTCGCTTTCATGGTTGATAATGAAGCTATCTA
CGATATTTGCAAACGTAATTTAAGTGTTGATCGTCCATCATATTTCAATC
TGAACCGTTTGATTGGTCAAGTGGTTTCCTCTGTTACAGCTTCCTTGAGA
TTCGAAGGAGCTTTAAACGTCGATCTGAATGAGTTCCAAACAAACTTGGT
CCCATACCCCAGAATCCATTTCCCAATTACGTCATTTGGTCCTATCATGT
CAGCTGAAAAAGCGTCTCACGAAAATCATAATGTCCAAGAAATCACCAAT
GCTTGTTTTGAACCACAGAATCAAATGGTGAAATGCGATCCTCGACATGG
GAAATACATGGCTTGTTGTCTTCTATACCGTGGCGAAATCGTCCCCAAAG
ATGTCAACACCGCAATTGCTCAAATCAAGACCAAACGAACCATCCAGTTT
GTGAATTGGTGCCCAACTGGATTTAAAGTTGGGATCAATAACAATGCCCC
TGTCGTTGTTCCTGGAGGTGATTTAGCTCAAGTCAAGAGGGCTGTTTGTT
CCTTAGCTAATACGACTGCTATTGCTGAAGCCTGGTCAAGTCTCGATCAT
AAGTTCGATTTGATGTATGCTAAACGTGCTTTTGTACATTGGTATGTCGG
TGAAGGTAAGAGAATAATGAGAATAACCCTGTCTCAAGAGTTAGAATTCT
CAGTATAGTACTGTATTGAGGAAGGAAACCATAGTCTTAATGGCAGACCT
CTTCAAAGCTACAGGTAGGGTATAACAGGCCCGAccgaagcggggagact
ggggagactggggagacttcagcctccccagtTTTGAGCAAATAGAAttc
ttttctcaaattcctagcaaattttatctcattttgagccttcagcctcc
ccactttaacggttgttccgccggacTTGTAAGGATACAAGATTTCAGCA
TTCTAACGAGGCGCCAATACCAACCAAAGCTTTGATCAATACATATTCAC
AGCGGGTCATGTATTACTTTTAATTgggcttttaattttttggttaACCT
TCTCACTCTCAGAGCAGTTGAAGGCAGTGAATGATTTTACTTGTTGCTTG
AATCGAATGAGATTGgctcagatgagatggagttgttgtaaaaactccat
cttgtCCCTATTAGGTAGGTTGGTTTATTCACACTATTATCTGTACTGAT
TTCCTTATCTAGGTATGGAAGAAGGAGAGTTCTCCGAAGCTCGTGAAGAT
TTAGCCGCCTTGGAAAAAGATTACGAAGAAGTTGGAATGGATAAtgttga
tgaagaagaagatgatgaacttttttaaatgacgAGATTGCTCTATTGGA
ATGATATTCTCGAAGAGAACTAGAAACTTCGTACTACTTGGTATACACTT
TTTGTTAAAGATCCagtaaatttttattcaaattttgctgTTCTAATTTT
TTGAAAGCCTCAAATTGCATTATAATGTTCTCATCTTGTCTTATTTTTAG
GACAAAAGTGGggcatttttttatcaaaattgtgtTTAAGGTGTTACGCT
TTATAGCCGATTTTTGtcttttgacacttttttgCTACAAATTCAGCaat
tccaggctcagcattATTGAGGATTTCGAGCAtcgttgttttgaaaaatt
tattcttataaaaagcgagTTTAGCTTACGAGGATGGCTCAATGCTTTGA
ACTTTCACATCTCAGTTAAATTGGTAAAATATTatgtttttgctgttttt
gctaTTGTATATAGATGAAATACTGTAAGTGAACACATCGTTTCCTTTCg
taatttattctttttttaaatgtttttgtaaaatttgaaatgaaaagaat
TGATGTCATGTCATTTCTAACCAAGCTGTTTTACGAGCCTTCGTTTTTAG
AAAAACTCTTGCTTTTTACCTATTTGTCCTTTTTATGTGTTAGGTCAAAA
CATTTTCGACTAGGTTATGCATAAATCATGGCTCGTTCTATTCACCAATT
GATTTGATGTCTCCGGAACGTAGTGATTTGAAATGAGGAAAAGATTTGGA
CAAAACAAACAGCTTGAGTTTATTGAtgtaaatgaataaaaatatttcac
agcGGTCCCtttttgttataagaaaaaGCTACAGGCTAGGTTACTGGCTA
AGAACATTATGTTAGATTATAGACCATTCTATATACCCCTTTCATATTCT
TAGAATTATATTGCTAATCGACTTTCTCATTTCAGAAAAAAGTATAGAAA
ATATTGTCCTTCATTTGGTTTCACGTGGATCCTTGGTTCGATGAAGTNtt
ttattcaaattttgctgTTCTAATTTTTTGAAAGCCTCAAATTACATTAT
AATGTTCTcatcttgttcttatttttaggacAAAAGTGGggcattttttt
atcaaaattgtgtTACGGTGTTACGCTTTATAGCCGATTTTTGtcttttg
acactttttgcTACAAATTCAGCaattccaggctcagcattATTGAGGAT
TTCGAGCAtcgttgttttgaaaaatttattcttataaaaagcgagTTTAG
CTTACGAGGATGGCTCAATGCTTTTAACTTTCACATCTCAGTTAAATTGG
TAAAATATTatgtttttgctgtttttgctaTTGTATATAGATGAACTACT
GTAAGTGAACACATCGTTTCCTTTCgtaatttattctttttttaaatgtt
tttgtaaaatttgaaatgaaaagaatTGATGTCATGTCATTTCTAACCAA
GCTGTTTTACGAGCCTTCGTTTTTAGAAAAACTCTTGCTTTTTACCTATT
TGTCCTTTTTATGTGTTAGGTCAAAACATTTTCGACTAGGTTATGCATAA
ATCATGGCTCGTTCTATTCACCAATTGATTTGATGTCTCCGGAACGTAGT
GATTTGAAATGAGGAAAAGATTTGGACAAAACAAACAGCTTGAGTTTATT
GAtgtaaatgaataaaaatatttcacagcGGTCCCtttttgttataagaa
aaaGCTACAGGCTAGGTTACTGGCTAAGAACATTATGTTAGATTATAGAC
CATTCTATATACCCCTTTCATATTCTTAGAATTATATTGCTAATCGACTT
TCTCATTTCAGAAAAAAGTATAGAAAATATTGTCCTTCATTTGGTTTCAC
GTGGATCCTTGGTTCGATGAAGTCTTATTGGTTGGTTCCAGTGTCCAGTA
GTCTTCTTTAGGAGCTGTAAGTTAACAccttaattataagaatatcttac
tTTTTGACAGAGGCTTACAAATAAAAGATGCGTTTTATTATTATATGcat
atttgaatttttcatgGGGTTTTCTTATTGTCTCATCACAAACGACATAA
TCTTATAATTAGATCTTTGTTATCACTCGTAATACTCATTATGTTGGAGA
GCTATAGATAAAATGTCTCCTATTTGTTGATAAATAAGCCGCCAACAATA
GGAAAACAACCAATTAGAAACGAGTattgtctaccattttgaattcaCAA
ACGTGGCTTTTATATGTAATGAAGTAATGAAGTGAGTTTTAaagtttgac
atttttgaatttcgttTCAATACGTTAAACGCTCACTGGAGGAAAAACTT
TTATCGTTACTATAGTTTTTTACTAGTTTGCAAAAATGGTGAGTTTTCGC
ATTTTTTGGCTCGTTTGCTAAAAATGACCATTTAGTCACTTGAAGATTGT
TGATGCATTGTTGAGAACAATAGATATTCGATTTCGAACAATAGCCAACT
ATAACGAAATATATTTTGTAGAATTTGACGGCGTGGACGTTCTAAAAGCA
GCCTAACTgactaaatatttcttttttctcagaGAGAGTGTATTTCAGTT
CACGTTGGACAAGCCGGTGTCCAAATCGGAAATGCTTGTTGGGAATTATA
TTGTTTGGAGCATGGAATCCAACCTGATGGTCAAATGCCTTCAGATAAAA
CCATTGGAGGGGGAGATGATTCATTCAACACTTTCTTCAGTGAGACTGGT
TCTGGTAAACACGTCCCCAGAGCTGTTTTCATCGATCTTGAACCCTCAGT
TGTTGGTAAGAGCCAAAGTTATTTAATAAACTAATTCTTATTTTTCTGCT
CACTGTATTTTGTTTGGTATAGACACAGCGATATTACAAAGATGTCTCTC
GTAAAGCTTTAAACCCCTTGTCAattaattcttgatatgcgtaagtcatt
tttctagcggaaacacccgaaaaaatccgggatttgacccctctctgtta
ctaaaaatagaaacacagaggtcaaaatccggcttttttgggtgcttccg
ttaaaaatatgacgtcatcttgacttacgcatatcaagaataagaGAATT
TAAACCTTAGACGGCATTCCAAACATTTACAATTTGGGACGGGCTTAAGA
CTGAAAACATCCGTTTAGATCAGCTTTTTCTGACGATGATGGTATAATAA
CATTGTTGGTACTGCCTCAGTAATACTATTAGAAAGTAATTCATGCCAAA
CTGTACCACGATGCTAATGAAATTTCTCTTCACGTGAAACGCCCTGTTTG
CCATTCAAAATGAACATTAATTTTCCCTCTTTGTTATCTACTAATTAATT
TGCTTGCATGGAAAATAATGCGGTTACCATAGCAACTTGATTGCTAGGAG
GTATACAAAACAACGTATTTCTATAGATTCATATGTTTTGATTCCACGCC
TTATCGAGAATAATATTTGCGCTTTTAGAAGCGTTAGGTCACACGGTTTC
TAAgagattttcaacaaaaaactttttacacttttttcataaGGTATCAA
AATCTAGCTGCCTACttttagtagagggcattttgtaaaatcgctcgact
gttttgttagaagcacttgttatacatctttggaaagctaaggggtaggg
gaatcgaaatttctatgtttccaattttttttcggacactttggtgtgat
tttcggacaaatatgacggtctcaggcaaaaatcatagggttaaaaatta
atgaaaattttagctcgagaaaattgaaacctgttgtatatttttggaaa
gctctcaaaaaaataggattagagatatattgcaagtataggtgatttca
gtacctaactcgagatattgagcttcaaaaagcgcaaaaactggacaaaa
tagctgtttctggctgaaaaacacggttttcaagggttaatatctcgagt
taggtacaaaAATCACCTaaacttgcaatatatctctaatcttatttttt
tgagagctttccaaaaatatacaacaggtctccgttttctcgagctaata
ttttcattaatttttaaccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcccctaccccttag
ctttccaaaaatgtataacaagtgcttctaacaaaacagtcaagcgattc
caaaaaatcgaacaaaattccccctactatttcTTACAAATccctgaaag
tttttttctttcaaatcttttaCTTATTCATgaaattcatgacgtaatgt
ttttaacggaaataccccggtttaaGCAAGTAGTGACAAATTTAAACCAG
ACAAAAGTTACATGAAATTTGCTACttctggcaaaaaccggggtctttcc
gtagaaatcattacgtcattaatatcatgaatacgtaACAGAATAACATT
CTTTCTTGTACATAATAGCTTTTGGAAATCCTTGCTAAATCTTCTAATTA
AACTTCGTTACCGCCCTAGCAATTCAAAAAGGATGAGTCTTTATACCGTC
TAATTGCCgtctttttgaaaaacattcttTGACATATGTTATCAAAATTG
ATATATCTTTTACTTCATAATTGTAAAGCTGTATGGCTCTTGCAATATGC
ATTTGCTCGAAATTTGTTGCCAAATTTTTAGCAACCTCCTGTTTTGTTCT
CTAATCACCCAAAAACCTCATTAAGCAATTAATTATATTTCGACCTCATT
AACGAGCTATATCTTCTATTTTGTAGACGAAGTGCGTACCGGTACATATC
GTTCACTTTTTCATCCGGAACAATTAATCACCGGAAAAGAAGATGCCGCA
AACAATTACGCTAGAGGACATTATACTGTCGGTGAGgatttttttgatat
ttgaagttaaattattattgatgtttgtaaaagaattttgatattttacc
tCGTGGATTTTGCACTCTATTGCAGAGAAAATTCATGAAGACACTAATCT
GACGATATTGTCTTTATAATTACCGTCTAGCTTCAAATGGAAAATTCGCC
AACCTGTTAATGACCTTCTTTTTCTCTCTCTTAGGCAAAGAATACATTGA
CCAAACCTTAGACCGAGTCCGAAAACTGTCCGAGAATTGCACCGGTCTTC
AAGGATTCTTGATCTTCCACTCTTTCGGTGGAGGTACCGGATCTGGATTC
TCATCCTTGTTGATGGAACGTCTCTCCGTCGACTATGGAAAGAAGTCGAA
ATTAGAATTCGCTATCTATCCAGCACCGCAAGTCTCCACAGCTGTCGTTG
AACCATACAATTCCATCTTGACCACCCACACAACTTTGGAGCACACTGAT
TGTGCTTTCATGGTTGATAATGAAGCCATTTATGATATCTGTCGTAAAAA
CTTAGATATTGAACGACCTTCCTACACGAACTTGAACAGATTGATCAGTC
AAATCGTCTCCTCAATCACAGCTTCCCTTCGATTTGATGGATCCTTGAAT
GTTGACTTGACCGAGTTCCAAACTAACTTGGTCCCATATCCCAGAATTCA
TTTCCCAATGGCTACCTACGCTCCAGTTATCTCCGCTGAGAAAGCTTTTC
ACGAACAGATCACCGTAGCTGAAATCACCAACGCTTGCTTTGAACCACAG
AACCAAATGGTGAAATGCGATCCACGACATGGCAAATACATGTCATGTTG
TCTACTCTACCGTGGTGATGTTGTCCCTAAAGACGTCAATGCTGCTATCG
CCAACATCAAAACTAAACGAACCATCCAATTCGTTGATTGGTGTCCAACT
GGATTCAAGATTGGAATCAATTACCAACCACCATGTGTTGTCCCAGGAGG
TGACCTCGCTAAAGTCCAACGTGCAGTTTGTATGTTGTCTAACACTACTG
CTATTGGAGAAGCCTGGGCTCGATTGGATCATAAATTCGATTTAATGTAT
GCCAAACGTGCTTTTGTACATTGGTATGTGGGAGAAGGTAAGAAACCGAG
GTTTTTTATCATGGAATCCTGTTTATTTCATCTTTCAAGTTAGTCTTTTT
GCAAAAGTGAGaaacattttgttttaaaaagttcttttaCCGCAAGGATC
CCGTGACGTTTGAAATTTGTATTAGACCATAGCCTACAAAGTCAACATTC
GTTGGTTTCATCTTAACCaattacaatcatggtcgaaatctattgagaat
taagcttatttcctcgttttttgaaatttggagttcgggcgagaaagttg
attttgggccatctctcaaatttcggatatttcaatttggctcgggttta
tagaccTCCAGACTATactatattatgagccttattggaccatttttgaa
catttttgaacatttggatcctcagatcctaaggtgctaagtcttaagtc
tcgtgttaaaactcagagttaaaactctacccttccaacctactttagag
cacttacaaatcgattgtggtttcaaaacttcccggtggatttccctttt
tttctcaaatataacgaccatgattgtagcattCAGTTTCGGATGttatt
aaccaatcaaattttatttctaATCGCTTAGGTATGGAAGAAGGAGAGTT
CTCAGAAGCTCGTGAAGACATGGCCGCTTTGGAGAAAGATTACGAAGAAG
TTGGAATGGATAGTGGTGACGCTGATGAAGCCGAAGATGATGAATATTAA
ATGCGAAGGAGCCAAAGACCAAATATGGAATTGCATGCTTGAAAATGCTC
TCCGTCACATTGACTATTTAATAAGAATTTGCTACCATCGTGCCGTctga
agtttttttcatttatcattttTGCCATTATTTAATGAACGAGGAGAATA
ATATTTCATTCATTCAAACTATAAATAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051294-exon-scaffold_200-1491911889:128050..128263 | TCONS_00051294-exon-scaffold_200-1491911889:128050..128263 | Clytia hemisphaerica | exon |
| TCONS_00051294-exon-scaffold_200-1510915933:128050..128263 | TCONS_00051294-exon-scaffold_200-1510915933:128050..128263 | Clytia hemisphaerica | exon |
| TCONS_00051294-exon-scaffold_200-1575043694:128050..128263 | TCONS_00051294-exon-scaffold_200-1575043694:128050..128263 | Clytia hemisphaerica | exon |
| TCONS_00051294-exon-scaffold_200-1491911889:129563..129667 | TCONS_00051294-exon-scaffold_200-1491911889:129563..129667 | Clytia hemisphaerica | exon |
| TCONS_00051294-exon-scaffold_200-1510915933:129563..129667 | TCONS_00051294-exon-scaffold_200-1510915933:129563..129667 | Clytia hemisphaerica | exon |
| TCONS_00051294-exon-scaffold_200-1575043694:129563..129667 | TCONS_00051294-exon-scaffold_200-1575043694:129563..129667 | Clytia hemisphaerica | exon |
| TCONS_00051294-exon-scaffold_200-1491911889:129952..130854 | TCONS_00051294-exon-scaffold_200-1491911889:129952..130854 | Clytia hemisphaerica | exon |
| TCONS_00051294-exon-scaffold_200-1510915933:129952..130854 | TCONS_00051294-exon-scaffold_200-1510915933:129952..130854 | Clytia hemisphaerica | exon |
| TCONS_00051294-exon-scaffold_200-1575043694:129952..130854 | TCONS_00051294-exon-scaffold_200-1575043694:129952..130854 | Clytia hemisphaerica | exon |
| TCONS_00051294-exon-scaffold_200-1491911889:138181..138479 | TCONS_00051294-exon-scaffold_200-1491911889:138181..138479 | Clytia hemisphaerica | exon |
| TCONS_00051294-exon-scaffold_200-1510915933:138181..138479 | TCONS_00051294-exon-scaffold_200-1510915933:138181..138479 | Clytia hemisphaerica | exon |
| TCONS_00051294-exon-scaffold_200-1575043694:138181..138479 | TCONS_00051294-exon-scaffold_200-1575043694:138181..138479 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_200 | supercontig | scaffold_200:128050..138479 + |
Blast
BLAST of TCONS_00051294 vs. Swiss-Prot (Human)
Match: TBA1A (Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A PE=1 SV=1) HSP 1 Score: 738.028 bits (1904), Expect = 0.000e+0 Identity = 369/438 (84.25%), Postives = 403/438 (92.01%), Query Frame = 1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGEMXXXXXX---XXXXXXXXXETGTGKRVPRAVFVDLEPAVIDEVRSGTYRSLFHPEQLITGKEDAANNYARGHYTVGKEYIDQTLDRIRKLCDLCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVEYGKKAKLEFSIYPSPKVSTAVVEPYNAILTTHTTLEHSDVAFMVDNEAIYDICKRNLSVDRPSYFNLNRLIGQVVSSVTASLRFEGALNVDLNEFQTNLVPYPRIHFPITSFGPIMSAEKASHENHNVQEITNACFEPQNQMVKCDPRHGKYMACCLLYRGEIVPKDVNTAIAQIKTKRTIQFVNWCPTGFKVGINNNAPVVVPGGDLAQVKRAVCSLANTTAIAEAWSSLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGMDS 1305
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDG+M SD T +DS +TFFSETG GK VPRAVFVDLEP VIDEVR+GTYR LFHPEQLITGKEDAANNYARGHYT+GKE ID LDRIRKL D CTGLQGFL+FHS+GGGTGSGFTSLLMERLSV+YGKK+KLEFSIYP+P+VSTAVVEPYN+ILTTHTTLEHSD AFMVDNEAIYDIC+RNL ++RP+Y NLNRLIGQ+VSS+TASLRF+GALNVDL EFQTNLVPYPRIHFP+ ++ P++SAEKA HE +V EITNACFEP NQMVKCDPRHGKYMACCLLYRG++VPKDVN AIA IKTKRTIQFV+WCPTGFKVGIN P VVPGGDLA+V+RAVC L+NTTAIAEAW+ LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVG+DS
Sbjct: 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS 439
The following BLAST results are available for this feature:
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