TCONS_00051233 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051233
Unique NameTCONS_00051233
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4095

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051233 ID=TCONS_00051233|Name=TCONS_00051233|organism=Clytia hemisphaerica|type=transcript|length=4095bp
ATTTAGAAACTTGAAATAACAAGAATAAAAGAAATGGGTGAAGAGGAAAT
TGTCCCTAATGATGTTGATTCTGAAGAAAATTCTGAAGATGAGATTtctg
atgaagatgaagaagagaTCAGTGATTTGGATGATGAAAGTGACGATGAT
CTTGACCAGGTTGTTGAACAGCCCGATGATGATGAAATTGCCAAAACAAA
ACCAGCTAGAATTAAGGTAACAGATACTATTTTTGAAGCAGCCTTCCACC
CATCAAAGGATATCCTTGCGGTTGGAGAGATTACTGGCACTGTaagtata
ttttcattttccaatGGGGAGAATAAAAAACTGATTGATTTTAAACATCA
AAAAGAAGCTTGTCGTTGTTTAAGCTTCTCTTCTGATGGACAGAGATTAT
ATTCTGGGTGCCAAGATAGTTCTATTTATTGCTCTGATATGAACACTGGT
TCAATTCTACACACCATCCCAAACGCTCACGATCAATCAATTAGCGCTAT
GCATTTAGTGTCAGATAATTTCCTAACCAGTGGCTGTGAAGCTGGTGTCG
TGAAAGTTTGGGATTtgagaactttttcaaaagctgCTGACTTTGTTGGA
AGAAAAGATTACATTTCTGCATTAACCAGTGACAAACAGAAGAAACATTT
GCTATCCACTAGTGGAGATGGTGTTTTGTCTGTGTTCAATTTACGCAAAA
ACGCAATTGTTCAAGAATCTGATCAGTTAGATGATGAGCTTTTATGTTTG
GATATCATCAAAAATGGCAAGAAAGTGATATGTGGCAGTGCAACTGGAGT
GCTGAATATTTATTCATGGGGAGAATGGGGAGATATAAGTGACCGATACC
CAACCCGCTCTGATGAAATTGAATCTGTGTGCTCTATTAATGATGACATC
ATCTGCTATGGAACAGGGGATGGCTACGTCAAAGCCATGTATGTGCAACC
CTACAAGGAAATCAAGACTGTTGGGAGGCATGGTATTATGGGTGTAGGTA
GTATGAAGCTCTCTCCTGATAAGAGTATGTTGGTGAGTTGTGGTGGTGAT
GAAACCGTCAGATTCTGGAAAGTTGCTGATTTACAAGAGGAGTCCTTAGA
CGAAGATGAAAGAAGAGGTGTCAAACGAAAGAGAACAGATGGTGACTCCA
AAGCTGCTGATTTCTTTGCTGACCTTTGAAAATCTCTTGGTACTAACTGG
CTTCGTATCTGTTTTATCCAAAGAGTCTTGCTTTTGTTAACACTTTGACC
TGAGAGGATACTGTCTCTTTTACCTTGCAAGTTTTTATAACAGACTCAGT
CTAAAGTTTTTGTACAATCATTTTTACTATATTGGCAAATATATATTATA
ACCCATTTAACCATATAACCAGGAAGTAGAAGTTACAAGTTGCAATTAGC
AGCAATTATACATCAACATTGATATAAATCTCTCTTTATTACTATATTTG
TCAATGAGATTTTCTTTATACAGGAAATCTGAGGAAATCTGTACTTTTGA
ATGCTTTTCTATTATCATACACAACGTTTCAAAATTGCTTTATGCCTCTG
TGTGATGGATGTGCGAATTCTGTGTTATAATACGACTGGCAAAATGACAA
ATGTGTCACATTTAAAACTAATAAATTTTCTTGATTAAAATATCATTACC
TTGTTATTAACAGCATTTATtacaatgtaaacaaacttgtTCCTCATATT
ATTGTaggctaaaaagatattatcgagaaaatgtttataatataaagaaa
caaaacattatCATACACGACCAGCACTTGATTCGCTGCCAGGATGACTG
CATTTGAATGATTTGGTCAATGATGGTGAAGATATGAAAAGTATTTTGTT
ATGAGCCGAGGTGGAGGAgcaagttgttgttgttgttttgtgaCTGGTTT
TATCATACTTGGAATATTGGCCAGCATATCGTTGGTATTTTATTATCTCA
GCTACCTGATGAAAAATCAATACATAGAGGAATTATCAACCACATAAATT
ACTGTTCTTGTTGGTAACCTTACCACCAAAAAACTGTGCCAAGATGTTGC
AACAAATTATAAAGACAATGTATATAGAGCCTGAGCTCCTTGAAGAGCTA
TCAGAAGAACAGAAGCAGATTTTGTATTTCAAGATGCGTGAAGAACAGAT
CCGAAGATACAAAGTTCgaatggaagaagaagaaatggaAGGGAAACTGA
ACCCTGAAccaaagaaaggTTTGAAGAAGGTGAGCTTCCTGACGAACGAC
GAGGATGAACCGATTGTTCACGTCATCAAAGATCCCGATGATGAACATGT
TGTCGATGCTGTTGcTGTTAAGAAGCGAATAGAGGCTGAAGCTTTAAAGC
TAGCTGAATTACAGGCTAAAAAAGAGCatgaagaaaaacgaaaaaaggaa
ctggaaactattgagaagaaaagaaaagaagaagagaaaaggttgaaaga
tgaagaagaaagatTGAAAAAGGAGAGAGAACAAAAAGTAGCAGAGCTGA
AATTACAGGCTGAAAAGGCTGCTGCCCTCGAGGCTAGAgAGGCAACCTTG
CAAAGGGAAAAAGCAGAACTTGAGAGAATTGAGCTTGAACGAAAACGCtt
ggaagaagaaaaacaaagggAACAAGCACTTCAAGAATTACGCGAAAAAG
AAGAGGTAGAGAAGAAACAAAGAGAGGAAGAACAGAGAATCGAAGAGGAG
AAACGAAAAGAAGAAATCTacgaaaagttgaaaatacaACAGGAAGAAGA
GAGGaagaaggaagaagaagaagcagaaCAACTTCAACAAGAATGGGAAG
AGAGGGAAGTTAAAGCTAAAGAGGCCGATCGACAAAGACGTAGTTCCATA
TCTCAAGCAAGAAATGAACTGTCTCGTCAACGCAGGCTTGCCAAAGAGCG
CGAAGAGCTTGAACGGTCACGTGTTGAAGCAAAGGTTGATGAAAAGCCAG
AAATCTATGACCCAGAAGCAAACAAGACTGTTTTTACCCAAACCACACCG
CCAcctgatgaaaaagaaaagtcgAAAAAGGATAAGAAACAGAGTTTCAG
TTTCGGAAGAAAGAAGAAGCCTTCATTGGAGGAGAAAGAAAACAAGAAGA
AGCACTCCCCTACTTTATTgaGTGCCTCTAAAACTAAAAGCCCGGAGCGT
CCGCCCTTGCCAGCACGCCCAACGATATCAGCACCAAGTGGTGTAACAAG
CACACGAACTGAAAAGGATGCCATTCCTGTCAAAAAAGACATTGTAAAGC
CTAAACGCCCACCACCTCCGCCAACAGGTGGTGGCGGTGATAAAAAGAAT
ACTTCAAAACCACCCTTACCCCCTCGACCGAAAAGTCACAATGAGGTTGT
CACATGGTggaaagataatgaatatgatAAAAAAGCGGGTCTGGATGATG
ACCATAAGCCACTGCAATGGTTTCATGGCACCATTTCACGCCTACAAGCT
GAACACTTGCTAGAGGACCAAAAACAAGGATCCTTTTTAATCAGAGTCAG
TGAAAGAGTATGGGGTTATACTATTTCTTATAAAGACGTTGCAAGATTCA
AACACTTTTTAATTGATACCACGTCAGGCTATCAGTTGTTTGGTACAGAA
CAGAAAGTACATAGTTCCTTGAATGAGCTTATCGATTACCATAAACAGCA
TCCTATATCAGGGCTTGgtcaagaaattttaaaattcccTGTCGGTCAAA
ATACCGACCCACCGGATTATGCCGACCTATTTGTTGAAAATACAAGTATT
TGATTGGAAATTCACTGGTGGTAATAGAAAGTATCTAACGAGTTTTCTAT
GTTGGTACGTTTTCAATACGGTTGGTTTTTGCATGTATTGGATGTGTTTG
ACTTGGTTTGCAATGCAGTTTTTTTGCCTTACAGATTTGGGAGAAACATT
GTTTTTGTTGCATGTTTTCCCTGAATTATTTTCCATCTACCAATACCACC
AGTGCATCTACTGCTAAGAGCGATACCTTAGCCTCTAAGATATTCCACAG
ACACTCAGTCTCGAAAATTTAGACACCCTTTTAGAGAAATTCCACTAAGC
CTTAAGCGGGATCACATCTTTTTTCTCAATAACCTAACTTATTAT
Run BLAST on NCBI

transcript from alignment at scaffold_20:83308..89236-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051233 ID=TCONS_00051233|Name=TCONS_00051233|organism=Clytia hemisphaerica|type=transcript|length=5929bp|location=Sequence derived from alignment at scaffold_20:83308..89236- (Clytia hemisphaerica)
ATTTAGAAACTTGAAATAACAAGAATAAAAGAAATGGGTGAAGAGGAAAT
TGTCCCTAATGATGTTGATTCTGAAGAAAATTCTGAAGATGAGATTTCTG
ATGAAGATGAAGAAGAGATCAGTGATTTGGATGATGAAAGTGACGATGAT
CTTGACCAGGTTGTTGAACAGCCCGATGATGATGAAATTGCCAAAACAAA
ACCAGCTAGAATTAAGGTAACAGATACTATTTTTGAAGCAGCCTTCCACC
CATCAAAGGATATCCTTGCGGTTGGAGAGATTACTGGCACTGTAAGTATA
TTTTCATTTTCCAATGGGGAGAATAAAAAACTGATTGATTTTAAACATCA
AAAAGAAGCTTGTCGTTGTTTAAGCTTCTCTTCTGATGGACAGAGATTAT
ATTCTGGGTGCCAAGATAGTTCTATTTATTGCTCTGATATGAACACTGGT
TCAATTCTACACACCATCCCAAACGCTCACGATCAATCAATTAGCGCTAT
GCATTTAGTGTCAGATAATTTCCTAACCAGTGGCTGTGAAGCTGGTGTCG
TGAAAGTTTGGGATTTGAGAACTTTTTCAAAAGCTGCTGACTTTGTTGGA
AGAAAAGATTACATTTCTGCATTAACCAGTGACAAACAGAAGAAACATTT
GCTATCCACTAGTGGAGATGGTGTTTTGTCTGTGTTCAATTTACGCAAAA
ACGCAATTGTTCAAGAATCTGATCAGTTAGATGATGAGCTTTTATGTTTG
GATATCATCAAAAATGGCAAGAAAGTGATATGTGGCAGTGCAACTGGAGT
GCTGAATATTTATTCATGGGGAGAATGGGGAGATATAAGTGACCGATACC
CAACCCGCTCTGATGAAATTGAATCTGTGTGCTCTATTAATGATGACATC
ATCTGCTATGGAACAGGGGATGGCTACGTCAAAGCCATGTATGTGCAACC
CTACAAGGAAATCAAGACTGTTGGGAGGCATGGTATTATGGGTGTAGGTA
GTATGAAGCTCTCTCCTGATAAGAGTATGTTGGTGAGTTGTGGTGGTGAT
GAAACCGTCAGATTCTGGAAAGTTGCTGATTTACAAGAGGAGTCCTTAGA
CGAAGATGAAAGAAGAGGTGTCAAACGAAAGAGAACAGATGGTGACTCCA
AAGCTGCTGATTTCTTTGCTGACCTTTGAAAATCTCTTGGTACTAACTGG
CTTCGTATCTGTTTTATCCAAAGAGTCTTGCTTTTGTTAACACTTTGACC
TGAGAGGATACTGTCTCTTTTACCTTGCAAGTTTTTATAACAGACTCAGT
CTAAAGTTTTTGTACAATCATTTTTACTATATTGGCAAATATATATTATA
ACCCATTTAACCATATAACCAGGAAGTAGAAGTTACAAGTTGCAATTAGC
AGCAATTATACATCAACATTGATATAAATCTCTCTTTATTACTATATTTG
TCAATGAGATTTTCTTTATACAGGAAATCTGAGGAAATCTGTACTTTTGA
ATGCTTTTCTATTATCATACACAACGTTTCAAAATTGCTTTATGCCTCTG
TGTGATGGATGTGCGAATTCTGTGTTATAATACGACTGGCAAAATGACAA
ATGTGTCACATTTAAAACTAATAAATTTTCTTGATTAAAATATCATTACC
TTGTTATTAACAGCATTTATTACAATGTAAACAAACTTGTTCCTCATATT
ATTGTAGGCTAAAAAGATATTATCGAGAAAATGTTTATAATATAAAGAAA
CAAAACATTATCATACACGACCAGCACTTGATTCGCTGCCAGGATGACTG
CATTTGAATGATTTGGTCAATGATGGTGAAGATATGAAAAGTATTTTGTT
ATGAGCCGAGGTGGAGGAGCAAGTTGTTGTTGTTGTTTTGTGACTGGTTT
TATCATACTTGGAATATTGGCCAGCATATCGTTGGTATTTTATTATCTCA
GCTACCTGATGAAAAATCAATACATAGAGGTGAAGCTCTTTTTGTTGTTA
CCACTACTACCTACTACGACTATAGTAGTAGTGTTTTGTTTTGCTTAAAA
CAGTTAAGCAAAACTCAAACTTAACAGGACTCAANGAAATCAATACATAG
AGGTGAAGCTATTTTTGTTGTTACCACTACTACCTACTACGACTTAAACT
TAGTAGTAGTGTTTTGTTTTGCTTAAAACAGTTAAGCAAAACTCAAACTT
AACAGGACTCAATATCATCATAACATTTTTCTTTTGAATGGCTATCCTCT
TGGTTTTTCTTGATAAGAATAGAATAAGGGCACTTTACATTTTAAACAAT
TTCTCACCAGTATGCTGTCCCGGTATATGAAAATGTTTCACTTTGAAGAA
TAGATGATTTAATAACATGGAAACTTTAATAAATTTTCTAAAAAAAAAAG
AAAAGTTTATCAAAATCAAAGAACTTCTTCTACTGCTATACTTGTGAGAC
AAGCTTAAGTGTAAAGAGATTTTCAGTTCACAGAACAATTACTCGACAAT
TGTTGAAAAATTACTCAATGTTCTTTTTTTCCATGTACAGGAATTATCAA
CCACATAAATTACTGTTCTTGTTGGTAACCTTACCACCAAAAAACTGTGC
CAAGATGTTGCAACAAATTATAAAGACAATGTATATAGAGCCTGAGCTCC
TTGAAGAGCTATCAGAAGAACAGAAGCAGATTTTGTATTTCAAGATGCGT
GAAGAACAGATCCGAAGATACAAAGTTCGAATGGAAGAAGAAGAAATGGA
AGGGAAACTGAACCCTGAACCAAAGAAAGGTTTTTACTGTGTATTTTTTC
TTCTCATTTTATTTCTTGCAGTGTTTTCAAAGTATGTTTGTTGAAATGGG
ACTGTCTGTCTGAATTTTAAATTAACAATTAATTAAAGTCAATTCGTGTT
AAATAATGACCAGGAGGTTGTTCTACTTTAGTAACATTTACGTTAGTGAA
TGTTTGACGTTGAAACGATATAAAGAATATATAGGCCTAGTTACACCCCT
GCAAACTGGAAAAATTAGCTAAGAATTTGTTCCTATTAAGAAAAATACCC
GTGTTTTCAATTAATTATATTATATCTTAAAAACCAAATGATTGCAAGAA
TTTAGATTTTCTAGAGATACTTATTTAGGGTTGATCTATCAAAATCGCAT
TTTCTTCTCATAATTGACTATTCAGTCAATTCTTTTTCCACAATAAACCC
TCTTTTTTCTTTTCAAGGTTTGAAGAAGGTGAGCTTCCTGACGAACGACG
AGGATGAACCGATTGTTCACGTCATCAAAGATCCCGATGATGAACATGTT
GTCGATGCTGTTGGTAAAAGAATAATTTGTTTTGTGGCCAACTTTTTTCT
CTTTTAGTCTAATCAGGCCTATTGTTCCCATGGGACTCTTCAAAATAACA
CTTAGAAAAATTACAATGTGATTCCAATTCCCCCATCATAGGGACACACT
CTTTGATTGGACTTTTCTCAAAACCTTATTATTGAAATATTTTACGGGGG
CATCCCATAGTCATTACGAATTTTTGATCTTGAATTGATTTAAAAAGGCC
CATATCTAAGAAGCAAGCTTTCCTTTGAATAAATATTTTATTCGCCATTT
TATGGTCTATAAATCTTCAAATCAAATTTCTGAATCTTTTTTTTTACTTT
TTAAGCTGTTAAGAAGCGAATAGAGGCTGAAGCTTTAAAGCTAGCTGAAT
TACAGGCTAAAAAAGAGCATGAAGAAAAACGAAAAAAGGAACTGGAAACT
ATTGAGAAGAAAAGAAAAGAAGAAGAGAAAAGGTTGAAAGATGAAGAAGA
AAGATTGAAAAAGGAGAGAGAACAAAAAGTAGCAGAGCTGAAATTACAGG
CTGAAAAGGCTGCTGCCCTCGAGGCTAGAGTTAGTATTTTCAATGTTCAT
TTTACTCTTCTGGTCTTATCTCAGTCTAGTTGATTTTCTATAAAAATTTT
AAACTGAAATTGATATCTTTGAAAAAATGTTCTTTAGGAGGCAACCTTGC
AAAGGGAAAAAGCAGAACTTGAGAGAATTGAGCTTGAACGAAAACGCTTG
GAAGAAGAAAAACAAAGGGAACAAGCACTTCAAGAATTACGCGAAAAAGA
AGAGGTAGAGAAGAAACAAAGAGAGGAAGAACAGAGAATCGAAGAGGAGA
AACGAAAAGAAGAAATCTACGAAAAGTTGAAAATACAACAGGAAGAAGAG
AGGAAGAAGGAAGAAGAAGAAGCAGAACAACTTCAACAAGAATGGGAAGA
GAGGGAAGTTAAAGCTAAAGAGGCCGATCGACAAAGACGTAGTTCCATAT
CTCAAGCAAGAAATGAACTGTCTCGTCAACGCAGGCTTGCCAAAGAGCGC
GAAGAGCTTGAACGGTCACGTGTTGAAGCAAAGGTTGATGAAAAGCCAGA
AATCTATGACCCAGAAGCAAACAAGACTGTTTTTACCCAAACCACACCGC
CACCTGATGAAAAAGAAAAGTCGAAAAAGGATAAGAAACAGAGTTTCAGT
TTCGGAAGAAAGAAGAAGCCTTCATTGGAGGAGAAAGAAAACAAGAAGAA
GCACTCCCCTACTTTATTGTGAGCCATTCTTCATTTTAATACTTTCTCAT
AACATTTTTTTAAACTCGAAAATGTACTCTATCTATTCTTATACTTTCGT
CGTTTTTTTTTCTTAGGAGTGCCTCTAAAACTAAAAGCCCGGAGCGTCCG
CCCTTGCCAGCACGCCCAACGATATCAGCACCAAGTGGTGTAACAAGCAC
ACGAACTGAAAAGGATGCCATTCCTGTCAAAAAAGACATTGTAAAGCCTA
AACGCCCACCACCTCCGCCAACAGGTGGTGGCGGTGATAAAAAGAATACT
TCAAAACCACCCTTACCCCCTCGACCGAAAAGTCACAATGAGGTTGTCAC
ATGGTGGAAAGATAATGAATATGATAAAAAAGCGGGTCTGGATGATGACC
ATAAGCCACTGCAATGGTTTCATGGTGAGTCTTTTTCAACTTTAAAATCT
TTTTCATCGTAAAATTATTAGAAATTTGAGGATTTTTCTTGAAACTTAAT
TCATTTATAGTTTAACAATGTGGGAGGAAACAAGTCGGTGGGGAAAAGTG
ACCAAAATCTTTGAGGAAAATTTTCCCCTCGTCAACTAGATTGGACCTGG
GCATATCTTTCGGAAAAGTTTTTCCAAAAGGTTTTTGTCTCTACATTGTG
AAACTATAGATTTAGGATGTGTGACAACATTATTCAATATTTTTTCTTCT
TTTTTTTGCAGGCACCATTTCACGCCTACAAGCTGAACACTTGCTAGAGG
ACCAAAAACAAGGATCCTTTTTAATCAGAGTCAGTGAAAGAGTATGGGGT
TATACTATTTCTTATAAAGACGTTGCAAGATTCAAACACTTTTTAATTGA
TACCACGTCAGGCTATCAGTTGTTTGGTACAGAACAGAAAGTACATAGTT
CCTTGAATGAGCTTATCGATTACCATAAACAGCATCCTATATCAGGGCTT
GGTCAAGAAATTTTAAAATTCCCTGTCGGTCAAAATACCGACCCACCGGA
TTATGCCGACCTATTTGTTGAAAATACAAGTATTTGATTGGAAATTCACT
GGTGGTAATAGAAAGTATCTAACGAGTTTTCTATGTTGGTACGTTTTCAA
TACGGTTGGTTTTTGCATGTATTGGATGTGTTTGACTTGGTTTGCAATGC
AGTTTTTTTGCCTTACAGATTTGGGAGAAACATTGTTTTTGTTGCATGTT
TTCCCTGAATTATTTTCCATCTACCAATACCACCAGTGCATCTACTGCTA
AGAGCGATACCTTAGCCTCTAAGATATTCCACAGACACTCAGTCTCGAAA
ATTTAGACACCCTTTTAGAGAAATTCCACTAAGCCTTAAGCGGGATCACA
TCTTTTTTCTCAATAACCTAACTTATTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032475XLOC_032475Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051233-exon-scaffold_20-1575043694:87258..89236TCONS_00051233-exon-scaffold_20-1575043694:87258..89236Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1575043694:86458..86696TCONS_00051233-exon-scaffold_20-1575043694:86458..86696Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1575043694:85924..86019TCONS_00051233-exon-scaffold_20-1575043694:85924..86019Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1575043694:85358..85581TCONS_00051233-exon-scaffold_20-1575043694:85358..85581Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1575043694:84669..85249TCONS_00051233-exon-scaffold_20-1575043694:84669..85249Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1575043694:84263..84570TCONS_00051233-exon-scaffold_20-1575043694:84263..84570Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1575043694:83308..83975TCONS_00051233-exon-scaffold_20-1575043694:83308..83975Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1510915933:87258..89236TCONS_00051233-exon-scaffold_20-1510915933:87258..89236Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1510915933:86458..86696TCONS_00051233-exon-scaffold_20-1510915933:86458..86696Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1510915933:85924..86019TCONS_00051233-exon-scaffold_20-1510915933:85924..86019Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1510915933:85358..85581TCONS_00051233-exon-scaffold_20-1510915933:85358..85581Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1510915933:84669..85249TCONS_00051233-exon-scaffold_20-1510915933:84669..85249Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1510915933:84263..84570TCONS_00051233-exon-scaffold_20-1510915933:84263..84570Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1510915933:83308..83975TCONS_00051233-exon-scaffold_20-1510915933:83308..83975Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1491911889:87258..89236TCONS_00051233-exon-scaffold_20-1491911889:87258..89236Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1491911889:86458..86696TCONS_00051233-exon-scaffold_20-1491911889:86458..86696Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1491911889:85924..86019TCONS_00051233-exon-scaffold_20-1491911889:85924..86019Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1491911889:85358..85581TCONS_00051233-exon-scaffold_20-1491911889:85358..85581Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1491911889:84669..85249TCONS_00051233-exon-scaffold_20-1491911889:84669..85249Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1491911889:84263..84570TCONS_00051233-exon-scaffold_20-1491911889:84263..84570Clytia hemisphaericaexon
TCONS_00051233-exon-scaffold_20-1491911889:83308..83975TCONS_00051233-exon-scaffold_20-1491911889:83308..83975Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_20supercontigscaffold_20:83308..89236 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.7115	17.5742	9.7685	9.09174	38.2651	28.0194	33.2642	35.8447	29.6041	26.6647	20.8207	17.8396	17.1894	17.0883	19.4715	21.5246	27.2567	24.6356	12.028	11.7385	20.9731	21.1832	23.3119	23.2971	18.9942	21.4129	12.6813	9.83305	17.3784	17.2929
Blast
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BLAST of TCONS_00051233 vs. Swiss-Prot (Human)
Match: WDR55 (WD repeat-containing protein 55 OS=Homo sapiens GN=WDR55 PE=1 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 1.356e-57
Identity = 114/347 (32.85%), Postives = 193/347 (55.62%), Query Frame = 1 
Query:  175 DDDEIAKTKPARIKVT--DTIFEA-----AFHPSKDILAVGEITGTVSIFSFS--NGENKKLIDFKHQKEACRCLSFSSDGQRLYSGCQDSSIYCSDMNTGSILHTIPNAHDQSISAMHLVSDNFLTSGCEAGVVKVWDLRTFSKAADFVGRKDYISALTSDKQKKHLLSTSGDGVLSVFNLRKNAIVQESDQLDDELLCLDIIKNGKKVICGSATGVLNIYSWGEWGDISDRYPTRSDEIESVCSINDDIICYGTGDGYVKAMYVQPYKEIKTVGRHGIMGVGSMKLSPDKSMLVSCGGDETVRFWKVADLQEESLDEDERR----GVKRKRTDGDSKAADFFADL 1176
            ++D  +   P RI+ T  D + EA     AFHP++D+LA G++ G V +FS+S   GE K+L    H  +ACR ++FS DGQ+L +  +D +I+  D+  G +   +  AH   I+++ LV +N L +G + G + +WD R      D    ++YI+ +  D  KK LL+ SGDG L +FN+++      S+    +L  + ++K GKKV CGS+ G + +++W  +G  SDR+  R++ I+ +  + + ++C G+ DG ++A+ + P + + +VG+H    V  + LS     L S G D+ ++FW +A L+   +D+  RR    G  R  +       DFFA L
Sbjct:   16 EEDPDSMEAPTRIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGHHLKACRAVAFSEDGQKLITVSKDKAIHVLDVEQGQLERRVSKAHGAPINSLLLVDENVLATGDDTGGICLWDQRKEGPLMDMRQHEEYIADMALDPAKKLLLTASGDGCLGIFNIKRRRFELLSEPQSGDLTSVTLMKWGKKVACGSSEGTIYLFNWNGFGATSDRFALRAESIDCMVPVTESLLCTGSTDGVIRAVNILPNRVVGSVGQHTGEPVEELALSHCGRFLASSGHDQRLKFWDMAQLRAVVVDDYRRRKKKGGPLRALSSKTWSTDDFFAGL 362
The following BLAST results are available for this feature:
BLAST of TCONS_00051233 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR551.356e-5732.85WD repeat-containing protein 55 OS=Homo sapiens GN... [more]
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