TCONS_00051176 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051176
Unique NameTCONS_00051176
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length696

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051176 ID=TCONS_00051176|Name=TCONS_00051176|organism=Clytia hemisphaerica|type=transcript|length=696bp
CAAACTGTTAAAATATAGCATGTGGTTTTgaggttgaaaaaaaaacatta
tttatataCGGAGTATATTTACAATGGACCAAACTTGATACGAATTCATA
CAAGAGGTATATGTTTATGGTGGTTAAACTAAAGCTGCAATATTTTTTGA
ACCAGTATAAACAAACATTTCAAATAAATATGAGGTCACCTTTTGTGTTG
GTTGGTATGTCGCTGATGTTTTTGGATTTCAATATCCTATGTTACGGACA
AATCAGCCCGCTGAAATTTTGTGACAAAGCATCATTTATGgaaaaattta
tcgaaaaagCTAAGTCACCTGACCAAGAAACCAAGCAATTCTTGAAGCAA
ACATGCTCACGTCATGTACAATGCGCAGAAGCAACTTTCGATCTAATGTA
TCTTCGACGTGATAGTGGACAAGAGCAATATTTCTTTCTCGTTTCCTTGG
ACAAGCTAGATGATTTCAAATATAAAGGATGTTGGGGATACGAGCTTGAG
ATTTCGAATGAAAAAAGACtaattcaaaatgttttcatcaattttaatga
agAAGACAAGCGAAAGTatttccagcattacattccagtggaagaaaaca
aaaagtatACAGTGACATTACGAACATATCCAATAGTGACTTCTTATTCT
CTAACACTCAAAGTTCCAGGTCCATGCGAAAATGATGTTCTTGGAT
Run BLAST on NCBI

protein sequence of TCONS_00051176-protein

>TCONS_00051176-protein ID=TCONS_00051176-protein|Name=TCONS_00051176-protein|organism=Clytia hemisphaerica|type=polypeptide|length=195bp
MFMVVKLKLQYFLNQYKQTFQINMRSPFVLVGMSLMFLDFNILCYGQISP
LKFCDKASFMEKFIEKAKSPDQETKQFLKQTCSRHVQCAEATFDLMYLRR
DSGQEQYFFLVSLDKLDDFKYKGCWGYELEISNEKRLIQNVFINFNEEDK
RKYFQHYIPVEENKKYTVTLRTYPIVTSYSLTLKVPGPCENDVLG
Run BLAST on NCBI

transcript from alignment at scaffold_2:418805..426715+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051176 ID=TCONS_00051176|Name=TCONS_00051176|organism=Clytia hemisphaerica|type=transcript|length=7911bp|location=Sequence derived from alignment at scaffold_2:418805..426715+ (Clytia hemisphaerica)
CAAACTGTTAAAATATAGCATGTGGTTTTgaggttgaaaaaaaaacatta tttatataCGGAGTATATTTACAATGGACCAAACTTGATACGAATTCATA CAAGAGGTATATGTTTATGGTGGTTAAACTAAAGCTGCAATATTTTTTGA ACCAGTATAAACAAACATTTCAAATAAATATGAGGTCACCTTTTGTGTTG GTTGGTATGTCGgtgagttttgtttttttgagtttttctttttgctttta ttCCAAGCTCATACTTTTAGtcctttatttcatttttttttttaatataa tcaTTCACAAGCGATCAGAGACCTTCAACGGGATCATAAAACGGGGGTAG AGAGGGTGTTGAAGTGTATAACACAAAAATGATATATCGTAAaccttttt ttcataaatcagaaaattatttaaaaacaagaGGTCGaataaatagataa aaaaataaatcacaaataaattgaaaataagaCGCCGAGGCCCAGTGGTT AAAATATCAtctccagtggaaaattatactccaatttttccCCCcactga aaattatcaaataaatcaaacttcactgcaaaatattatgccaTTTTTCC CATCCTCActaatttttgacttttctgacaacaaaaaaattaaatcccca gtcaataaaaaatatgggaatattgatcccatcgagtttcagtccgttat ttttatcccctacGGCTaccgggtctatgagaaggggttGTTATTAAAAA TGAATCAAAAGTAAAGCATATACAAATCAATATCTCGGACATAAAATCTT AAGTGAATTACCCTTCGGTGGTGGTGGTTGCTCTCGGTCAGAGGTTAACC TGTGTTTAAGATATTAAACTGCCCTCATAATAACTTATTCCCATTTAAGC TGATGTTTTTGGATTTCAATATCCTATGTTACGGACAAATCAGCCCGCTG AGTAAGTATATTGCTCTTTTGACCCTCTATTGACGCTATATTTCTCATTC GCCAAATAATCTTGAGGATaattacacactttttttataagaacaaacta tttagGAACATAAAAAACTTCaaaggccaaaatattgagaacaagtaaga acattttaagactttgtgggCTCACAGGAAAACACACATAAATACGTTAC TTAAAATATTCAAAGGAATATAATATTAAGCAACTTTATAATATAAACTA AACACATTTCATATTCTACATTTTAGAATTTTGTGACAAAGCATCATTTA TGgaaaaatttatcgaaaaagGTAATCTCACGATAATTTTTGCTCTCCAA TATGAAAATGACGTAAAAGTGATGAATCAGGAGCTCCTATAAATCTCAaa gcagattctgatactctGCGCATGACGCGCATTCACTCTAAATACAAGGT TGCCAGGTTGGTGCACCGCTTTGACCTTTTTCATCCCGATTATTTGAATG AGCTTTTGAGCACGGTTATTAAAACAATTATTAACATAACcaacccagtc gctttcgctttcgtcTTCAAGCAAAAGGCAACACAGTTTTTTTGAATGGT TTTGCTGAATAACCAGTTCAGATCATCACATTTGCCATACCCATCCCTTT AGAATAGAGCGTGCTATGCGCAAAATGGCGGATGACCAGTTATGAGATTA GGATCACATACTGTGTGTATCACACCTTGTGATTCTTTTTGATATCCAAG CTGTGATCGTAAAAGTGATTCATATTTTTCGTACTGACTGTCAACAATAa gaaacacgttttttataagaacatccaataaTTTTGAGAAGGCTCACGGA TAAGTGAGCAAGAAATTTAAAGGAAATCTGTATTTAGACTACCTACACCA AAATTTCTGTTTAGAATGAAATACAAATCTACGTGTACTTGCTTGTGGTT TGGCTTTacactttctttttataagaacaaactatataagaacataaggt ttcgatggccaaaatgttcaGAACATATCAAGACTTCGTGGACCCAATAC CCAATttctttaggaaaatggacaaaaatgctcaaaaaatggtgaaaata agaacatgataagaacatttttaggcttgaaactaaaaaagttaagaaca tctgaagacttcaaaatttttggatgttcttataaaaaaaacgtcacCAT TGACGTCAGGATGTACCGTGAATAGCACATGTCAAAATcttatattgacg ctgtgccgacgaatcgagattctattcagcgcgcaatcaacgaaaacaaa aataaccatgacgaccatccaagatcttggatgaagttcaaagttgatat ttttattcccgtcgttaaAAACTCAacttaaaaaaatcatcaatgctttg taaaaatagtcagtgatagagattcataacataaagtctgtctattattt cgattcaattaaagtgacatttccctaatcaaaagtttagtaattactgt tatacatttggggatcatgtaaaagatttctttcgaaataaactcatttc aactacacttggaggtttctggggaattcgtaaatagtaaactgcatact gatacagtctgctagacattaatatgttAATATCTGCtgttcatctttga ttttttctacagtgattagattgacacatgcgcgataaaatttctattat tggtcttcagaggttaatatattctttgaaaacttaacctctgatactca gggtagtcaggcacagatatctaagcccgaagggctagataggtaacttt aagctttctccagcaaaagaaagttaagcaaaaatttgactttttaaatt tagtgccgatggataggatctagcattttaattgttttcggagcgcgaga tcaaaaaacgaaggcggcaaacgctatttcacatctctcaaaccggtgaa attgcatattttagtcacgtgactttggtaggaaatccttccaaacctag gcttcacttttcgataaaagccgcaaatctagcccttcgggctttacaga tatctgtgtaGTCAGGATGACTATCAACAAGTATTTTTTAGAAGCAAAAA CAGAATCTCGGCAAAAATGCGGTCACTACTCCTTGttcaaataaacaaaa tgtTTCGCTTGTTTTTGTTATTCCTCTGCCAAGTCAAACTTTGAGTCCTT CGAGTACTTTCCAATCTGTGAAATTAGTAGGAGATGATTAATAATCACTT Gcagttttcatatttttgagggagttccccttttgtgccaatgtagtaat aagaatattttttgaattttactcCAGACAATCTAACTTTTCGATTACTT TGACAGCTAAGTCACCTGACCAAGAAACCAAGCAATTCTTGAAGCAAACA TGCTCACGTCATGTACAATGCGCAGAAGCAACTTTCGATCTAATGTATCT TCGACGTGATAGTGGACAAGAGCAATATTTCTTTCTCGTTTCCTTGGACA AGCTAGATGATTTCAAATATAAAGGTAAGACGAATAGTTTTATCTATACT ATCCTATCCCCTTTTTGTATATCTTTCTTAAGAGTAAAACTTTAGAACCC CTTAAAAACCTTTCTCTGAATGCTTTTGCCAttgagcttttccagaaaaa aaccgtttaCCACCTGTTGAGGAGGACAAAtatccgttccaagggggtca GGTTTGATCAtatggcggaattccataggaagatgcaaaaatctgtcaaa aatagcTGGAATTCTatgggggtagctttttaaattcTACCAAAATTCAG AGAGgagtttaaacctgaaatttcCAGCCACATAGGGATGGACTTCCTCA ACAGGGGATAtgcatttttttctgaaaaagcccattGAAACTTTGTTCAA TAATTTTTGACGGACAAGGAATCTAAGAATTTTGAAtcagaaattatcaa aaaagagAGCACTGAAGAAGTAATTAGGCTTTTTAGGCTTTAAGTTTTTA ACTGAAAGATTGAGTTTAAGGGCTATAGAAATCTAATGAATTCTTGAATT TTGATGAGTCATGCCTTTTGCTTTAGGATGTTGGGGATACGAGCTTGAGA TTTCGAATGAAAAAAGACtaattcaaaatgttttcatcaattttaatgaa gAAGACAAGGTATGTTGTTCTTTGTTTAAACAGCTGAGATTATTTAACTA AACAATTAGATTTACAACAACGTCGTTTAATAAACCAAACCTGTTGAATG TTCACTCCTTAGAAAGCAATTTATTTCACAAACTTTATCAAAAACGCTTT ACTTGACTTCTTTGTTTATTATAAAGCTTAGGTAACTAGCTGTACCACCC GGTGGGGGTTTGGGCACTCAAGGTAAGAGACCTTCCGTAGGTGCGACCCT CAAGGGTACGCTTTTCAGGTTTCCTGGAGTGTACTATAACTTATAAAGGT CGAAATGATTAGAATGATTAAAAGAAATGACATTAGATTCTTCAGTCAAA ATCAACTCACAAATATGCAAACATACAACacgtcttttataagaacaaac tatgtaagaacataaggcttcgacggccaaaatattatattattaaatat tatataagaatatttttactctttagactcaaaaagttaagaacttcCAA AGACTTCAAAGGTTTTGGATGCTCTTTTAAAAAAACATGCAGtttaaatt gaaaaagattAGGACTCAAGCTATTTACAAAATGAACTTTAAAAGGTCAT CCTATACATCCTGAACAATTTTCCGTGCCTGTGTgcattttcttcggctt tgggctctTATTttttagatagtgatttgtttTAGACTATAGTATAGTGT AGTCTATATAAAGAACAACATatctatttgaaaaaaatctttaggACTCG CTTTTTGTAAAGCACATTAGAGAAGGACTGGATATCAATTTTGTTGTTTA AGCATAATTTCTATTTCTTCGATATCGTTGGTGTTATCAGCAAAGGTTCT CCATCGAATTTTGTCTCTCTGAAATAATCTCAAATTCCCGCAGTTAGAAT ACCAAAACCCTCCATCAAATTTCTTCGCGCAATTAGAATCACTTCTGGAG TTATTTTTTGTCGAAAAATAAGACCCGTTGATGTTCTTATCTTGGCCTTG ATCAAAGTATTCGAATGATTTTATACCTTTTAACAAAGTGCGGTTGTATG TTAAACGGTAAAGGTTAGCTTCATTTGCCACTGAAAAAGAGCCATGCATT GAGATTCCttcatttttgttgttgttgttgttgttgttgttgttgttgtt gttgttgttgttgttgttgttgttgttgttgttgttgttgttgttgttgt tgttgctgttgctgTTGCTGTTGTTGCTGATGTTGTTCTTATCGTCAATA ACACTCATTCcattgttcttctttttctttgccCAAACAAGAACCAAATG CTTTTTACACGAAGTtatctcataaagaaaatcatttccaaaccaaaatt catttttcaaatctccAAAGCCATTTTTATACCACTCCCATTCTCGATCG AAATCTTCAATGAATTTATTTGTTCGACGCACAAAAACAAGCCAACCACC GCCCTCGATTTCCTGATTACATCTCACTTCTTTCTGTTCACGCCCCATCC AATTGATTGTATAAACGCCTGACACCCTTGCACCCCGGTTATACCAATCT TGACAGCTTTCTGGAAAGTTTTGTTCCTCATCACTCACATAATAACTTGA TCCTATGACTTCAATTAGGCTTTCTTTGAGACATATTCGATCATAAAAAT CACATTCGACAGTATCTCCGTTGAAAATCACGCTATAAGAACGACATATA TTCCATGTTGCGCAAATACTGATACATTGCTGTTGAAATTTCGTTTGAAT CGTCCTCGAAGGAAGCCCCGTGGGTTTTCCATTGGTTGATATCAAATGAT AAAGAGCTGCTTGCACAAACGGAACACAAGTTattatgaaaatgaagatg tatTTTACGATATCTCTTAGTACCATTTCTATTACTGATACTTGTCCCAA AAAAAACCCTAAAGAAAGTGGATTTTGGTTGAAAGTATCTCAATATATTg ctaaaaaaacttattttcgaaattaagcTCCATAGTGAGTTAATAAATAt ttcttctttgaaaatatttgataattttttcctgtttaTAATTCATACTG ATTGTTGATTAAAAGAATACCAATGATTTTCCCAGCAGCTcacaaatgaa aatatttttttcaaatatgatATATATTATTAGTGAATTTCCCGTCCTCA TTTCTAAGAGTCcctttaaaaaacttaattcatcaaatattttcaaagtt tatAAGTTTAAAAAGTTAGTTTATACCTTAAAGTAGCATCCCGGGATTGT TAGGGAATATATCCTGGTGTTGGCCAAGTGAGAGCTATCACTAAGgataa aaaaaacttatgatACACAGAGATTGAGATTGTAAATCTGGAGAAATTTC CTTCTGTTATAATCATTTTCCCTCATTGTCTCTAAAAagcactcccttct cacagacccattaCTCAATAAATGAGATTTGGTCGGCTTAAGATATATTA TTTCCTATTTCCTCATTAATGTTTGTACTTAAGACATCTCGTTGgctatt ttttcttttagacGAGGACAACAACGCTATCTATTTTGACTCAGTGATAT CTCAGTTGCTTAGTCTTAATTAATAATTATTTCATAtactccttctcaca gaccgaCTAGGACCCCTTCCTactggaaaaattagccaaattaTCGTTCC AGGTGCAAAATTATCCACCAATTTTCGTTCCCACTGAATatgatcaaata aaccaatcctcactgttaaatatttactatttttcccacccccactaaat tttctgatttaaaaacaaaagaaatgaaatccctagtcataaaaaatatg gaaatattaattcccattgagtttaagtccgttatttttatccccactgg gtgaaaaatcctaccgggtttgTGAAAAGGGTGTTTAAAAATAAGCAATC GAAATCTTCAAGGAGAATAATTTTATCAAcctttttattctttgtatagC GAAAGTatttccagcattacattccagtggaagaaaacaaaaagtatACA GTGACATTACGAACATATCCAATAGTGACTTCTTATTCTCTAACACTCAA AGTTCCAGGTATGTCATACTTATTCCGGGGGGGGGAGTGTGTTTACttac tgacggtatgtgcggcgaaaataTCGACCCTTAGAATCGCACTCTTACAG TGGAGCAAAAATTaacctgagtatcagaggctgAGTTTTCCAAGAAAGTA TCAACCTCTGACGACCAAGTGTAGAAATTCCATcgtgcatgtgtcaatct aatcactatagaaagaatcaaagttgaagagcaaatattaccatattaat gtctagcagactgtgtCAGTATACATGTTTACTATTGACGAATTCTTCTT AATCCAAGACCTTGGATTGTCGTAATGGTTACTTtattttctctgcgttg attgctcGCTGAATAGAATTGATATTCGTTGTCACATTTGGAATATACCC CGGGTTCTTAATGGAAAATTATAATTTCATCTAAAAGTTATACTTTCACG ACATTTAAAATGTagctcgaagggctagagaAGAATCGTCAACCTTTCCT TAGCAATAAAAAGTGAAGccaatttcttgatttttatcaaGATGGAAGGG TGGATTGATCCTTACTTTAAAGGCTCGATATTAAGGGCCCAATTTTTATC CAAATATTAATTGTATTAAAATTTGTAGTAGAATAGTTAAGTACGGTCTT GAATCGGTTATGTTACTTATACGGTGTGGAAGTTCTTCTCTTTACTGTCG AGTTTAAAATTTGTAGCATTTAAACTTTTATAAGGTCCATGCGAAAATGA TGTTCTTGGAT

Coding sequence (CDS) from alignment at scaffold_2:418805..426715+

>TCONS_00051176 ID=TCONS_00051176|Name=TCONS_00051176|organism=Clytia hemisphaerica|type=CDS|length=4095bp|location=Sequence derived from alignment at scaffold_2:418805..426715+ (Clytia hemisphaerica)
ATGTTTATGGTGGTTAAACTAAAGCTGCAATATTTTTTGAACCAGTATAA
ACAAACATTTCAAATAAATATGAGGTCACCTTTTGTGTTGGTTGGTATGT
CGCTGATGTTTTTGGATTTCAATATCCTATGTTACGGACAAATCAGCCCG
CTGAAATTTTGTGACAAAGCATCATTTATGgaaaaatttatcgaaaaagC
TAAGTCACCTGACCAAGAAACCAAGCAATTCTTGAAGCAAACATGCTCAC
GTCATGTACAATGCGCAGAAGCAACTTTCGATCTAATGTATCTTCGACGT
GATAGTGGACAAGAGCAATATTTCTTTCTCGTTTCCTTGGACAAGCTAGA
TGATTTCAAATATAAAGGATGTTGGGGATACGAGCTTGAGATTTCGAATG
AAAAAAGACtaattcaaaatgttttcatcaattttaatgaagAAGACAAG
CGAAAGTatttccagcattacattccagtggaagaaaacaaaaagtatAC
AGTGACATTACGAACATATCCAATAGTGACTTCTTATTCTCTAACACTCA
AAGTTCCAGGTCCATGCGAAAATGATGTTCTTGGAATGTTTATGGTGGTT
AAACTAAAGCTGCAATATTTTTTGAACCAGTATAAACAAACATTTCAAAT
AAATATGAGGTCACCTTTTGTGTTGGTTGGTATGTCGCTGATGTTTTTGG
ATTTCAATATCCTATGTTACGGACAAATCAGCCCGCTGAAATTTTGTGAC
AAAGCATCATTTATGgaaaaatttatcgaaaaagCTAAGTCACCTGACCA
AGAAACCAAGCAATTCTTGAAGCAAACATGCTCACGTCATGTACAATGCG
CAGAAGCAACTTTCGATCTAATGTATCTTCGACGTGATAGTGGACAAGAG
CAATATTTCTTTCTCGTTTCCTTGGACAAGCTAGATGATTTCAAATATAA
AGGATGTTGGGGATACGAGCTTGAGATTTCGAATGAAAAAAGACtaattc
aaaatgttttcatcaattttaatgaagAAGACAAGCGAAAGTatttccag
cattacattccagtggaagaaaacaaaaagtatACAGTGACATTACGAAC
ATATCCAATAGTGACTTCTTATTCTCTAACACTCAAAGTTCCAGGTCCAT
GCGAAAATGATGTTCTTGGAATGTTTATGGTGGTTAAACTAAAGCTGCAA
TATTTTTTGAACCAGTATAAACAAACATTTCAAATAAATATGAGGTCACC
TTTTGTGTTGGTTGGTATGTCGCTGATGTTTTTGGATTTCAATATCCTAT
GTTACGGACAAATCAGCCCGCTGAAATTTTGTGACAAAGCATCATTTATG
gaaaaatttatcgaaaaagCTAAGTCACCTGACCAAGAAACCAAGCAATT
CTTGAAGCAAACATGCTCACGTCATGTACAATGCGCAGAAGCAACTTTCG
ATCTAATGTATCTTCGACGTGATAGTGGACAAGAGCAATATTTCTTTCTC
GTTTCCTTGGACAAGCTAGATGATTTCAAATATAAAGGATGTTGGGGATA
CGAGCTTGAGATTTCGAATGAAAAAAGACtaattcaaaatgttttcatca
attttaatgaagAAGACAAGCGAAAGTatttccagcattacattccagtg
gaagaaaacaaaaagtatACAGTGACATTACGAACATATCCAATAGTGAC
TTCTTATTCTCTAACACTCAAAGTTCCAGGTCCATGCGAAAATGATGTTC
TTGGAATGTTTATGGTGGTTAAACTAAAGCTGCAATATTTTTTGAACCAG
TATAAACAAACATTTCAAATAAATATGAGGTCACCTTTTGTGTTGGTTGG
TATGTCGCTGATGTTTTTGGATTTCAATATCCTATGTTACGGACAAATCA
GCCCGCTGAAATTTTGTGACAAAGCATCATTTATGgaaaaatttatcgaa
aaagCTAAGTCACCTGACCAAGAAACCAAGCAATTCTTGAAGCAAACATG
CTCACGTCATGTACAATGCGCAGAAGCAACTTTCGATCTAATGTATCTTC
GACGTGATAGTGGACAAGAGCAATATTTCTTTCTCGTTTCCTTGGACAAG
CTAGATGATTTCAAATATAAAGGATGTTGGGGATACGAGCTTGAGATTTC
GAATGAAAAAAGACtaattcaaaatgttttcatcaattttaatgaagAAG
ACAAGCGAAAGTatttccagcattacattccagtggaagaaaacaaaaag
tatACAGTGACATTACGAACATATCCAATAGTGACTTCTTATTCTCTAAC
ACTCAAAGTTCCAGGTCCATGCGAAAATGATGTTCTTGGAATGTTTATGG
TGGTTAAACTAAAGCTGCAATATTTTTTGAACCAGTATAAACAAACATTT
CAAATAAATATGAGGTCACCTTTTGTGTTGGTTGGTATGTCGCTGATGTT
TTTGGATTTCAATATCCTATGTTACGGACAAATCAGCCCGCTGAAATTTT
GTGACAAAGCATCATTTATGgaaaaatttatcgaaaaagCTAAGTCACCT
GACCAAGAAACCAAGCAATTCTTGAAGCAAACATGCTCACGTCATGTACA
ATGCGCAGAAGCAACTTTCGATCTAATGTATCTTCGACGTGATAGTGGAC
AAGAGCAATATTTCTTTCTCGTTTCCTTGGACAAGCTAGATGATTTCAAA
TATAAAGGATGTTGGGGATACGAGCTTGAGATTTCGAATGAAAAAAGACt
aattcaaaatgttttcatcaattttaatgaagAAGACAAGCGAAAGTatt
tccagcattacattccagtggaagaaaacaaaaagtatACAGTGACATTA
CGAACATATCCAATAGTGACTTCTTATTCTCTAACACTCAAAGTTCCAGG
TCCATGCGAAAATGATGTTCTTGGAATGTTTATGGTGGTTAAACTAAAGC
TGCAATATTTTTTGAACCAGTATAAACAAACATTTCAAATAAATATGAGG
TCACCTTTTGTGTTGGTTGGTATGTCGCTGATGTTTTTGGATTTCAATAT
CCTATGTTACGGACAAATCAGCCCGCTGAAATTTTGTGACAAAGCATCAT
TTATGgaaaaatttatcgaaaaagCTAAGTCACCTGACCAAGAAACCAAG
CAATTCTTGAAGCAAACATGCTCACGTCATGTACAATGCGCAGAAGCAAC
TTTCGATCTAATGTATCTTCGACGTGATAGTGGACAAGAGCAATATTTCT
TTCTCGTTTCCTTGGACAAGCTAGATGATTTCAAATATAAAGGATGTTGG
GGATACGAGCTTGAGATTTCGAATGAAAAAAGACtaattcaaaatgtttt
catcaattttaatgaagAAGACAAGCGAAAGTatttccagcattacattc
cagtggaagaaaacaaaaagtatACAGTGACATTACGAACATATCCAATA
GTGACTTCTTATTCTCTAACACTCAAAGTTCCAGGTCCATGCGAAAATGA
TGTTCTTGGAATGTTTATGGTGGTTAAACTAAAGCTGCAATATTTTTTGA
ACCAGTATAAACAAACATTTCAAATAAATATGAGGTCACCTTTTGTGTTG
GTTGGTATGTCGCTGATGTTTTTGGATTTCAATATCCTATGTTACGGACA
AATCAGCCCGCTGAAATTTTGTGACAAAGCATCATTTATGgaaaaattta
tcgaaaaagCTAAGTCACCTGACCAAGAAACCAAGCAATTCTTGAAGCAA
ACATGCTCACGTCATGTACAATGCGCAGAAGCAACTTTCGATCTAATGTA
TCTTCGACGTGATAGTGGACAAGAGCAATATTTCTTTCTCGTTTCCTTGG
ACAAGCTAGATGATTTCAAATATAAAGGATGTTGGGGATACGAGCTTGAG
ATTTCGAATGAAAAAAGACtaattcaaaatgttttcatcaattttaatga
agAAGACAAGCGAAAGTatttccagcattacattccagtggaagaaaaca
aaaagtatACAGTGACATTACGAACATATCCAATAGTGACTTCTTATTCT
CTAACACTCAAAGTTCCAGGTCCATGCGAAAATGATGTTCTTGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032438XLOC_032438Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051176-proteinTCONS_00051176-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051176-exon-scaffold_2-1491911889:418805..419016TCONS_00051176-exon-scaffold_2-1491911889:418805..419016Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1510915933:418805..419016TCONS_00051176-exon-scaffold_2-1510915933:418805..419016Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1575043694:418805..419016TCONS_00051176-exon-scaffold_2-1575043694:418805..419016Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1491911889:419704..419755TCONS_00051176-exon-scaffold_2-1491911889:419704..419755Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1510915933:419704..419755TCONS_00051176-exon-scaffold_2-1510915933:419704..419755Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1575043694:419704..419755TCONS_00051176-exon-scaffold_2-1575043694:419704..419755Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1491911889:420031..420075TCONS_00051176-exon-scaffold_2-1491911889:420031..420075Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1510915933:420031..420075TCONS_00051176-exon-scaffold_2-1510915933:420031..420075Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1575043694:420031..420075TCONS_00051176-exon-scaffold_2-1575043694:420031..420075Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1491911889:422111..422278TCONS_00051176-exon-scaffold_2-1491911889:422111..422278Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1510915933:422111..422278TCONS_00051176-exon-scaffold_2-1510915933:422111..422278Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1575043694:422111..422278TCONS_00051176-exon-scaffold_2-1575043694:422111..422278Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1491911889:422831..422913TCONS_00051176-exon-scaffold_2-1491911889:422831..422913Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1510915933:422831..422913TCONS_00051176-exon-scaffold_2-1510915933:422831..422913Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1575043694:422831..422913TCONS_00051176-exon-scaffold_2-1575043694:422831..422913Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1491911889:425854..425962TCONS_00051176-exon-scaffold_2-1491911889:425854..425962Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1510915933:425854..425962TCONS_00051176-exon-scaffold_2-1510915933:425854..425962Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1575043694:425854..425962TCONS_00051176-exon-scaffold_2-1575043694:425854..425962Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1491911889:426689..426715TCONS_00051176-exon-scaffold_2-1491911889:426689..426715Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1510915933:426689..426715TCONS_00051176-exon-scaffold_2-1510915933:426689..426715Clytia hemisphaericaexon
TCONS_00051176-exon-scaffold_2-1575043694:426689..426715TCONS_00051176-exon-scaffold_2-1575043694:426689..426715Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:418805..426715 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0728496 0 0 0 4.7156 2.87238 2.06051 2.63049 2.70111 0.380201 1.99277 0.776279 3.73065 3.01895 3.26795 7.36915 0.218752 0.392373 1.39393 1.45865 0.422611 1.03067 0.167056 0.075939 0 0.139611 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051176 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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