TCONS_00051143 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051143
Unique NameTCONS_00051143
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length438

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051143 ID=TCONS_00051143|Name=TCONS_00051143|organism=Clytia hemisphaerica|type=transcript|length=438bp
TAGATGTTGAAATGAATTTGTGATCTCGGAAAGGCATCAcgaaaaaaggt
tctctttgtAACAAAGTTTGGTTGTGAGAAAAATATCCAGTTGGAAAGAG
TTAACGAGGTTGAAGAGGTCGACGTGGTGAAGATTAATAAAGGGATGACA
GcgaattccttcaaaagaaaCAGattgATTGTCCTCTTTCTACTTGGTTT
CGTGTTTGCTTTGCTATTTGTAAAAGTTTACCAGAACACCAAAGACAAGT
ATGACTACATTAGACAACACCACCCCCAAATGGTCAAAATAGCAAAGAAT
ATCTTCGAATTAAATTCGAAAGAAACTCAGCATCTGAAAACAGATGCaac
aaaagaaatagaaaagaatgaaaagaaaatagaagaaaagaTAATAGAAG
AAAAGAAAGTAGAAGAAAAGCAAGGAGCTGGAGATATG
Run BLAST on NCBI

transcript from alignment at scaffold_199:36822..54226-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051143 ID=TCONS_00051143|Name=TCONS_00051143|organism=Clytia hemisphaerica|type=transcript|length=17405bp|location=Sequence derived from alignment at scaffold_199:36822..54226- (Clytia hemisphaerica)
TAGATGTTGAAATGAATTTGTGATCTCGGAAAGGCATCACGAAAAAAGGT TCTCTTTGTAACAAAGTTTGGTTGTGAGAAAAATATCCAGTTGGAAAGGT AAAGACGTTCGATTTCATGTCCTTGTACGCTATTGGGCTCTTCCAGAAGA AATCCGTTCATTGGAGGGTTGGAGTATATATTATTTTTTCAATAATTTAC TGCTGGATATTTTCATTTTTCACCCCATGGACACGGGTTATATTCATGGA TAATCATTAAAATTTACCCCTGAACATCGCAGATTTACCCCCTGGACAAT GCAATTTTAAGGAGTTTTTTGGGACCCCTGGACAATTCATCCTCCATCCT CTCATGAACGGATTTTATCTAAAAGAGCCCATTGGTAGTTTGTTAAATGG AAGATCCCGTAAAAAAGTTAAACTTATTCATTCCTGAGGAATCTTTCTAT TGGTCATTTTTGATTTTACAACAGAGCAAGACTCTGAGTAGATCAAAACT AATTTAAATTTGGTTGACGCGTTTTGTCTAAAGGCTGCACGGTACACGTT TTTTTCTTATAAGAGCATCCAAAATTTTTGAAGCCTTCAGATGTTCTTAG CTTTTTGAGTTTCGAGCATGAAAATGTTCTTAACATGTTCTTATTTTAAC CAATTTTTGACCATTTTTACCCATTTTCCTAAGAAATCGAGTGTTTTTGA GTCCATAAAGCCTTAAAATGTTCTTAACTTGCTCTTAACATTTTGTCCAT CGAAGCCTTATGTTCTTATATAGTTTGTTCTTATAAAAAAATGTGTATTT TCGGGCTTTAATGCCGTACCTAGGGCTAACTATAAGATAAAGATGACAAT AAATCTCAATTGAACATTCTTGGGCTTTGCATTTTCAAATTTTCCCGTAG TTTGCACCCCCCTTTTACCCCCTATTAAAAGAGGATGCCAACTTTTCTGG GGTCTTTCTAGGGGGCACAGTACCAGGATTTGCCAGGAAATAAAATAATA AAGGGGGTTTGAAAATTTTGGCCAATCTGATTATATACAATTATGGTCAG TTTGTTTAAAGGGACTTACAGGACTACTTGCGAAATTTGTAAACAAACTG TATGCAGCGGATACAAAATCAAAACAAATGTCACATGTCAAAATAAAAAA TCAAACCAAATATGGCTAATTTTGATTGTTCAATTGTTTTACAAGTTTGT TTTGGACACGTGATTTTAATTGTTCTCTTTAGTGACACGTGGTTCGCGCA ATGTTTACATTTTACTACTTTAATGTCCCTTTAATCACATAATAAAAAAG TGAGCAAAACAAACTAATTTCTCAACACAAGCTCAAGTACGAACAATGGA AAGAAACAAAAGGCTTCCAAACCAGGGTTTTTTATACGAATTATAGTATA TATTGGCTATTTTTGGTCATTTAAAGAGCTTCATATATCATCATTTGTTC CAGTGAAGTTGAAAAATCTTCNTAAAGAGCTTCATATATCATGATTTGTT CCAGTGAAGTTAAAAAAATCTTTATTTTTCCTCTTCATATTTCTTCTTCT TGTTTTACTTTCAAAAAATCTTCAATTATTTAGATATAACGTACCTCTCA AAAATATCTTATCAACGGTGTATAACTGCTAGCATTTTTTATAGTGAGTG CAGGGAAATCGTTAAAAACGTAAAGTGTCAACAAAATTTTTTGAGTTTGA GCCTAAAAATGTTCTTAAAATGTTCTTATTTTCACCATTTTTGAGTATTT TTGTCCATTTTCCTAAATGTGTTTAGAGTCCACAAAGCATTAAAATGTTC TTAACTTGTTCTTAATATTTCGGCCATGTATGTATGTATGTATGTACGTA ATAGTTTATTTCATGTTGACGAGAAGGTAGCAACAAAGGCTAATAAAAGT CAACGCTACTTTACATCGAAGCCTTATGTTCTTATATAGTTTGTTCTTAT AAAAAAGACACGTACCATACTTACCTATAACAATCCTAAATTTCCTTTAA CAATCAAATGCATTTTCTGAGCACCGATTAGTTCATTTAGGTCAATTACA TCATAATTTTGAGTTTCAACCAATCAGATTGATACGATTGTTGAGGGAAC TTTTGAATTGTTATATGTAAGTGGTAATTATGTCTAATTACGCACAATAT ACGCATTTGTTTATTAGTGAATACAGATTAGCAATTATAACAAAAGCTAA ATGGTGGATAACCCGTTGACAAATCATTACACGCTTTTTTTTTATAAGAA TGGTGTTTTTTCATTCAGTCATGGATATTCTTACGGTATTCTTAGGTTAA AATCGAAATTGGCAATCTACAGGTTAAAATACATTAAAAATGATGATGGT GATATTCTTACCATATTCTTAATTTTTTGGCCATTTTCATTTTCATCATT CTTCTACAGTGTATTCTTATAAAAAAAAGCGTGTACCATAAATTGTTGTG ATCAAAAGAGGAAATTAACATCTTTGTTAATTGATGATTGACTTTTTTTC ATATCGCTTCGGGCGAACGAAAATGTAATTTACATACATGAGTAATACAA ACTGCTGTGCTTCATGAACTTTAATATGCAGTAGATGTTGAAATGAATTT GTGATCTCGGAAAGGCATCACGAAAAAAGGTTCTCTTTGTAACAAAGTTT GGTTGTGAGAAAAATATCCAGTTGGAAAGGTAAAGACGTTCGATTTCATG TCCTTGTACGCTATTGGGCTCTTCCAGAAGAAATCCGTTCATTGGGAGGG TTGGAGGATATATTATTTTTTCAATAATTTACCCCTGGACATTTTCATTT TTCACCCCAAGGACATGGGCTATATCCATGGACAATCATCAATTTAACCC CCTGGACACCAAAATTTACCCCTGAACATCGCAGATTTACCCGACAATGC AATTTTTAGGCTTTTTTTTGGGACCCCTGGACAATTCATCCTCCACTCTC CCATGAACGGTTTTTATCTAAAAGAGCCCATTGATAGTTTGTTAAATTGA AGATCCTGTAGAAAAGTTAAACTTGGTCATTCCTGAGGAATCTTTCTATT GGTCATTTTTGATTTTACAACAGAGCAAGACTCTGAGTAGATCAAAATTT AAATTTGGTTGACGCGTTTTGTCTAAAGGCTGCACGGTAAACGTTTTTTT CTTATAAGAGCATCCAAATTTTTGAAGCCTTCCGATGTTCTTAGCTTTTT GGGTTTCGAGCATGAAAATGTTCTTAACATGTTCTTATTTTAACCAATTT TTGACCATTTTTACCCATTTTCCTAAGAAATCGAGTGTCTTTGAGTCCAT AAAGCCTTAAAATGTTCTTAACTTGTTCTTAACATTTTGTCCATCGAAGC CTTATGTTCTTATATAGTTTGTTCCTATAAAAAAATGTGTATTTTCCGGG CTTTAATGCCGTACCTAGGGCTAACTATAAGATAAAGATGACAATAAATC TCAATTGAACATTCTTGGCCTTTGCATTTTCAAATTTTCCCGTAGTTTGC ACCCCCCTTTTACCCCCTATTAAAAGAGGATGCCAACTTATCTGGGATCT TTCTAGGGGGCACAGTACCAGGATTTGCCAAAAAAAACTGGGGTGGGGTG AGAATTTAGGGAAATAAAATAATAAAGGGGGTTTGAAAATTTTGGCCAAT CTGATTATATACAAATATGGTCAGTTTGTTTAAAGTTTGTTTACAGGACT TGCGAAATTTGTAAACAAACTGTATGCAGCGGATACAAAATCAAAACAAA TGTCACATGTCAAAATAAAAAATCAAACCAAATATGGCTAATTTTGATTG TTCTCTTTAGTGACACGTGGTTCGCGCAATGTTTACATTTTACTACTTTA ATGTCCCTTTAATCACATAATAAAAAAGTGAGCAAAACAAACTAATTTCT CAACGCAAGCTCAAGTACGAACAATGGAAAGAAACAAAAGGCTTCCAAAC CAGGGTTTTTCATACGAATTATAGTATATATTGGCTATTTTTGGTCATTT AAAGAGCTTCATATATCATGATTTGTTCCAGTGAAGTTAAAAAAATCTTT ATTTTTCCTCTTCATATTTCTTCTTCTTGTTTTACTTTCAAAAAATCTTC AATTATTTAGATATAACGTACCTCTCAAAAATATCTTATCAACGGTGTAT AACTGCTAGCATTTTTTATAGTGAGTGCAGAGAAATCGTTAAAAACGTAA AGTGTCAACAAACATTTTTTGAGTTTGAGCCTAAAAATGTTCTTAAAATG TTCTTAAATTGTTCTTAATATTTCGGCCATGTATGTATGTATGTATTCAT GTTGACGAGAAGTAGCAACAAAGGCTAATAAAAGTCAACGCTACTTTACA TCGAAGCCTTATGTTCTTATATAATTTGTTCTTATAAAAAAGACACGTAC CATACTTACCTATAACAATCCTAAATTTCCTTTAACAATCAAATGCATTT TCTGAGCACCGATTAGTTCATTTAGGTCAATTACATCATAATTTTGAGTT TCAACCAATCAGATCGATACGATTGTTGAGGGACCTTTTGAATTGTTATA TGTAAGTGGTAATTATGTCAAGCATTTTCATATCATCAAAACATAATTTT TCGTATAAAAGAGTAATTATGCACAATATACGCATTTGTTTATTAGTGAA TACAGCTTAGCAATTATAACAAAAGCTAAATGGTGGATAACCCGTTGACA AATCAATACACGCTTTTTTTTATAAGAATGGTGTTTTTTCATTTAGTCAT GGATATTCTTACGGTATTTTTAGGTTAAAATCGAAATTGGTAATCTACAG GTTAAAATACATTAAAAATGATGATGGTGATATTCTTACCATATTCTTAA TTTTTTGGCCATTTTCATTATCAACATTCTTATACAGTGTATTGTTATAA AAAAAGCGTGTACCATAAATTGTTGTGATCAAAAGAGGAAATCAACATCT TTGTTAACTGATGAATGACTTTCTTTCACAATCCGTTGCTTTCACAAACA AAAATGTAATTTACATACATGAGTAATACAAACTGCTGTGCTTCATGAAC TTTAATATGCAGTAGATGTTGAAATGAATTTGTGATCTCGGAAAGGCATC ACGAAAAAAGGTTCTCTTTGTAACAAAGTTTGGTTGTGAGCAAAATATCC AGTTGGAAAGGTAAAGACGTTCGATTTCATGTCCTTGTACGCTATTGGGC TCTTCCAGAAGAAATCCGTTCATTGGGAGGGTTGGAGGATATATTATTTT TTCAATAATTTACCCCTGGACATTTTCATTTTTCACCCCAAGGACATGGG CTATATCCATGGACAATCATCAATTTAACCCCCTGGACACCAAAATTTAC CCCTGAACATCGCAGATTTACCCGACAATGCAATTTTTAGGCTTTTTTTT GGGACCCCCTGGACAATTCATCCTCCACTNACAATGCAATTTTTAGGCTT TTTTTTGGGACCCCTGGACAATTCATCCTCCACTCTCCCATGAACGGTTT TTATCTAAAAGAGCCCATTGATAGTTTGTTAAATGGAAGATCCTGTAGAA AAGTTAAACTTGGTCATTCCTGAGGAATCTTTCTATTGGTCATTTTTGAT TTTACAACAGAGCAAGACTCTGAGTAGATCAAAACTAATCTAAATTTGGT TGACGGTTTTGTCTAAAGGCTGCACGTTACACGTTTTTTTCTTATAAGAA CATCCAAAATTTTTGAAGCCTTCAGATGTTCTTAGCTTTTTGGGTTTCGA GCATGAAAATATTCTTAACATGTTCTTATTTTAACCAATTTTTGACCATT TTTACCCATTTTTCTAAGAAATCGAGTGTTTTTGAGTCCACAAAGCCTTA AAATATTCTTAACATTTTATCCGTCGAAGCCTTATGTTCTTATATCGTTT CTTCTTACAAAAAACGTGTATTTTCCGGGCTTTACTGCCGTCCCTAGGGC TAACTATCCAAAAATTTACTCAACAAGCTAACCAAAAACAACAAGAATAC GTACAGTGCTGTGGCACAGCCACTTTAATGGGGGGGGTGTACGATCTGGC GGTACTCGGGATAAGGTCTAATTTAGGGTCGGGAATCGGTAAAAACGATA AAAAGTGTTCGGGAAACGGTATTTTGCAAGAGCCACGGTGACGGTAAAAC ACCTGATTTTTCGTCCGAGATGAAGTAATTCTTATAAAAAACAACGAATA TTTCCGTAAACATCATACGTAGACGGTACATAAACTTTTCGGACTATAAA AAAAGCTTGTCACAGGAGTCAGCAAAAAGGTAAAAAAAACGCGAAAAACT CCCAAAAAAATAAGGATTTTACACCATTTCGTAAAAAAACCTTATTTGAA ACGTTAATGCAAATGTGCACGGGGCTTTATAAAGCCCGGTTTCTATGAAA AGTGGAAACTCTTTGTTTTGTTTATTTCAATTATCAAGGGGCGCGGAGAA ACCAGACAAAGATTCGAATTTCGAATGTTTTTTTTNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNTTGAACTCCTCTCATATCTGCCACTTGAACCCTTTGTCTTAAGGTTTT TAAGTAACGCACTTGATTTTGACTATGATCACTCCTCAATGATACGCTTA TGCAATCTCACCTTATCGCTCCATCCATCAATAAAAGTAACGAAGTTTGT GGACACTGAAAATTAATTTTTCTATTAATAAGATCCTGATGGTAAAATTT GATAATATTCTTATAGACCCAAAATTGTTGATTTTTATTTCTGATAACGG ACAAAGGGTGTTGAGTCAGAGGTATTCTTAGCGACCGTTTCTGAAGATGC TTATTTGATACTTTTTATGAGATTCTGTTCTCTTCTTCTTGATTAATTAC ATATAAGTACTTATGGAAAAAAAGCAATTATTTTGCGCTACAGCAATGAC TTTTTGCCAAAAGGCAATTAGGTCTTTTGAGAAGTTTCGATGAGAAACAT ATGTAACAAAATGCAGTTTATTATAGTTGTGTCACATTTGAAATTTGCGA AGAGGACATTTGTATAAAAGAAACGAGTTGCTGTCAGATTCTGGTGAGAA TTATTCAACATTTTTGAAGCCTTCGGATGCTCTTAATCTTATGATTACTA AGCCTAAAATTGTTCTTAAAATGTTCTTATTTCACCATTTTGGGAGTTTT TTTTTTGTGCAATTTCTAAGAAATATAGGTGTTTCAAAGTTCAGAAAATC TTAAAATTTAACTTGTTCGCAAAAAGATTTTTTTTCGATTCATTAAATAT AATCTGTTCTCAAGATAACGTGTTGTAGCACAAACCAATTCAAATCTTTT TTTATAAGAATATTATACCTTATAAGAATGTTCATGATTAAATTGGCCAA AAAATAAAGAAAATGCTAAGAACATCATCATCATCACGGAATTCGGTTAG AGAATACCATTTTAGAACACATTTGACTGTATAAATTGCCAATTATCGGA GTTTTTGATTTTTCTAAAAAAGCGATGCATTGTGGGATTTGTTTCGAGGG TATTACAATAGAAATCTCTTGAGAATTTCTCAAGGGAATTCTATTGTAAT ACTAAAATTAACCCGTTTTTTAGCCTTTTTTGGCCAAAATTTGCCCCAAA ATTTTTTTTTTGAAAATCGGGCTCCGTCACATTCGAGGGTTTATAGTTAC ACATCTTTGCGCAAAAAATCAGAAAAAGCTAATGAGCCAATCTCGAGAAA AGCTGGTAACGAACGAACGGACAGAGGTGAATTTATAGGACCTCCACCGG GGCAGGTCCAAAAAAGATGTAGCAGCGTCCTTGCTTCACAATGCACGCTA TAAAAAGTTTCATTTAATTTGATTACGATTTATCTCATTTGTATTTGATT TGATTTATTATTAAAACAATTAAGATTTTTTTAGCACAAGCATCAAATCA AAAAAGATTTTTAGACATTCATTTTGAAATTCTCGAAATACACGTTTTTT TTATAAGAACAAACTATATAAGAACATAAGACTTCGCTAGCCAAAATGTT AAAAACAAGTTAAGAACATCTTCAGGCTTTGTGGACACAAAACACAAAAA AAAAACAAGAAGAGAAAAAAAAAACATAGAGAAAGAAAAGAAACAAATGG AGAGAGAAAAGTTTGTAGATATTTTTCAAGTTGACGATAACGAACCAGTT ATCACACTTTTACGCGTACAATATTCAATATTCAATACTAGCCGGTACCC GGCGTCGCACGCCGGTTAAGCTGTTGCTGAACGCACTTTAAGTCCTTTGG GTGTTGAAGGTCGCTTAAAAGGAACGATGGAATTAGAGTGAAGCAGAAAT CTCTTTAAAGTTGATTTTCGCCTCCCGGGCGACGAATCTTTTAACGATAT TTGAAGAAAGATTTTTAGAATGTGTCCTTCAAGAGTTATTTTTTATTCTT GTCAAAAATGATCAGGAAGGACGCTATTAAAATTACACAATACCGGCGAC CAGCGATGTCCGAAAGGACTCTGCAGTTATATTTTTTCTCGCTTCGCTTG CTTTACATTTGCCGTAAATTCTCGATAGTTTAATGGCAAGATGGGGAGGT GAAGTGAAATTATAAACATGACACGAGATTCTTCAGGAAAAGGCAGGAAT GGCACGCAGACAAAATAGCGTAATAGCCCAACTCTTTTTATCTAATTCGA AAAAAAAAAATTTAAATTTTAGATTTGTTCTTTCCTATAACAGATTTTGT TTAAAAGATTTTGTATGTCTCAAATCAAATAAGGTCGTTAATGACATTCG AAAACACGAAACAAAAAAAAAGAAAGGAAAAAAAGAAAAACATATAGACG GGCAAGCTAAGGCAGAAATTATAATCTATCAATCAAAACTCGAATAACTC AAAGTCATATTTTAAAAGAACAAAAAGATTGCCTGCGAAAACGAAAGCTA CACACATACAGAAAACAAACAGACATACAGACTACCGCTGTTAATATTAA TATACAGATATAGATTCAACGATTCAAGAATGATTTAAGAATTTCAAGAA TTCCATATTGGGTCGAATATGCTAAAATAAATGGACTCGATCAATATATA ATATAACAATAAAAAAATAATGTATGGATCCCGAATATAGATTCAATATT CACTATTCAATTTCCATTGAGTTATACAGTTGATGATCTGATGCTCTCTA ATTCGACTTTCAAGGTGAATTGGATTTTCATCGAATAAAGAAGCGTCTTG AATAGTGGGCATCATTTATGAGAGGTTCTAGTTGACGGTGATGAACTTTA ATATTACCGAGTTTATGTATTGGAGGATATCAAGGGCAACGGTAAGTGAA ATGATACAATAAACAGACGACAGTATTTTGGTATTTTTACCGTCGTCGAG CAAAGTGGACGGTGATTTTGAAGACATGTCAACTTTGCTTTATACCGTCC CCTTCGATTTATCTCGAATACATAAACTCGCTATTATAGAAAAATAGACC GTAATGGAGCATATCGAATAGTAGTACGTCAAATTAGAGAGCGATTAACC TTATTGAGACAAGACATTAATGTTAATCAAACCGTAGAGTGTGATCAGAA TAAAAATTCTAAATATTTGGAACGCTAGCTGTGTGTATTGTATTTATTCT ATTTTGATCTTCACGACTGGATAAAGTATCTGAGAGTAGAACAAGCCAAT CCTTTTGTATTTTGTTATTATTTTGTAAGAACACGAGAAGTTTTTTTCAC GTTGGTGCAATGCAACATGCTCCGTCCCGCCAACCTGAAACGCTTTCTCG TGTCTCCGCCCCGTTTTTCTTTCTACCAATAAAAGGGAAATCTCACTTTT GTCCCTGGGACAATGGAGTAAAATTGATTCGAATCAATTTTGCTCCATTG ATTCGAATCAATTTTGCTCCATTGTCCCAGGGACAAAATCAGCGTGTCTT TTGGGTATTTCCCTCAATTTTTGTCCCATGAAAGAAAAAAAAAGAAACCA TGAGACGCGAATTTTTTTCTTGTCTTGGTGGGATGGAGCATGTTGCATTG CACCAACGCGAACAAAACTTCTCGTGTCCCCAAGCCTTTATTGTTCTTAA TTATTTTTCTAAAATTTATTTTCGAAATATTTACTCGCCGGTGCCTAATA AACGCCTCCTCCCACTTGTTAATTTTTCGGTATATTTCCAACCCCAGATC TTATTAGAACCCATGTTTAAGTTTTAAGGCCGGCGCAAATGAATCCAACA TTTGATCCAGCATTATTGTTGGATCAAATGTTGGGTTCGTTTGCGCAAGT CATAAAATTGCAACTTTTTAAGAAAATTGTTGGAAATCATGTTGGTTGAA GTTTGATTGCCGTCAAACTTTTCATCCAACATTTTTTATGAGATTGACGT CACTTTTATGTTGGTTTCAATGTTGGATGCATTTGCGTAATCATGTTGGA TGAAAATGTTTGACGTTTTTACGCAAATGACTTTTCATGCAACTTTTCAA ATTTTTCCAACTGACTTTTCGTCCAACATTTCGTCCAACAATGAATTGTA AATGTTGGATTGAATATTGGATTCATTTGCGCCGGCCTTTAATTTTTGAA AATATTTTCACATGTCAAAAAATGAGTCCCTTATTATCATGTTCTAAATA GCCAGGTTTTTAGTCGATTTACCTTATTTTGGATGTATTTCAAGGTGCAA TGTCCAACCCCCCGTTTATTTAGAATTTTATTTTTCCAAGCCACATCCCC CACCCTTATATTCCAACCAACCCGTTTATTTGGCGCCTGAGAGTATGATC TTAAACAGACGACCTACTATCGATATCTGAGAGGAAATATTTTTAAAAAT GAAAATCTTTATAAAAATGAAAATTATGTAATTTCTCAAAATTGATCATT GATCTTTTTTTTCTAGAGTTAACGAGGTTGAAGAGGTCGACGTGGTGAAG ATTAATAAAGGGATGACAGCGAATTCCTTCAAAAGAAACAGGTAATTAGT AATCAGAAAAATTGAAATCTCTTAAACAGTAGCTTTGTGGTTCGACTGAA ACCAGGGCAAACTGGATAGAATTATTCCAAAGTTTGGTATTCACCCCCGC CTCCTCTATTTAAGAAACTATTATAAAACTCTTCAGTGATTGCCTTTCCA TTATTAAAACTTTGAGTATTTGGATGGGTCACAGGCAAGAAACAACAAAA ATTTATTTATTCATTGATAAATTTTCNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNACTTAATTAATTTTTTATCTAGG GAATAAAAATAATTTTTTAATCAAATGTCTGAAGATGCTAGATGTTATAA GATAGGTTTTTTTATGAGTTATGTTAAATCTGAAGATGCTCTACCATAGA GTAGGGAGAAAATTTATCAATGAATAAATAAATTTTTGTTGTTTCTTGCC TGTGACCCATCCAAATACTCAAAGTTTTAATAAGAAACTATCTTTAAATT CATTACGCGATTGAAGCGTAGCTTCTAGGCCGAAAAATGTTAATTTCAAG GTACACCGAAACTCGGCCGAGATTAGTGAACTGATGAGCCTCTAGCCTTT CAGCCCCCCCCCCGCCCTGCGCTGAGTGCAAGAGTATTCTAAAAAATTGA CCAATTAAAACTTTTGAAATGNAAAAAAAAAAAAAAGAGCACCGAAACTC GGCCGAGATTAGTGAACTGATGAGCATTTAGACGCCTCTAGCCTTTCAGC CCCCCCCGCCCTGCGCTGAGTGCAAGAGTATTCTAAAAAATTGACCAATT AAAACTTTTGAAATGATTTAATTTAACGTGTTAAGAGCCATCACACCGTT AATTTAAATTTCAAAACATTTTTTTGATTTTAAAATACGGGATAAAAAAA CAGGACGGTATTGGTATCAGCTTTCTCATTCAGCTTTCGATACACCTTTC CCGTAATTCGTAAAACTAGTGCGCGCGCATTATTTTGATGCTCTCCACCG TTTAGTCTCTGGAGGTAAACAAACCCGTTTTTGAAAGGAAAGATGGGTTT TTGAGCTTTTCTTAAGTTCTGTCGAACAAAACCCCCTCAAATTTTGGTAT GTTCAATCTATTCATGATATTATACCACCCTGAAAATCTCTTGCCAAAAG AAGATCGCTATCAAAAGTTAGAAGCTGAAAACCAACTTTCCCTAGCCCCT CGCAGGCAAAAACGCGTTCGTTTACCTCCCAAACAATTTTATACACAAAG GTGGAGCAGACAATTTCCCGGGAGATTTCTGAGAAGTTTGAATTACGGGA AAGGTGTATTGATGTAAAAGTCTATATTTTGACTTTGACACATTCTTTTT TTCATTTCAGATTGATTGTCCTCTTTCTACTTGGTTTCGTGTTTGCTTTG CTATTTGTAAAAGGTATGGTTTTAGAAGAATTTAAAGGTTTTGAAATAAG AGTGATATCGTTTGCTTAATCATCAATTTTGGTAAAACAAGATTGGTCAA AAGGAGGAAAAGAAAAACATTTTTTCGCTTATATCAGCAAACAAAATATC TTGAATATATGTTTAAAAGCTTCATGAATTATTGATTCGATTCTAGTGTT CATCTTGAATGGGGCATTCAATCTTATCTCCATACAGGGGAGAAGGACAA ACATTTCTAGGAAGTAATTCGAGCAGAATTTTGAAGGGGTCAAAAGAGTG CCTTTCATTTTTTCAGGGTGTAAAAAATTATTTTATAGAATTTTTCCAAA AGTTTTTTTGCAAATTTTGTCGTTTTCCACCCACACATTTCCAAGAAATG TTTTTTGACTTGAAAAGGTTCGTCCACCCCCTCCTCCCTGTATGAAAGTT TAATGGCATGCCCCCCAGCTGGCACACAACGTTGTTTCAACGTTCACCTA ACGTTAAATGGACGTTGTGAACGTTAGATAAACGTTGAAACAACGTTGTG TGCCAGCTGGGCCAATCGACAAAAGAAAACAATGATTAAACAAAATCAAA CGCGTTGGTAATCAAGAATTAGTCTAAAATAGCTGTTTTAGCTATGATGG GGAGTTTCAGGGGGTACCCAATTCCACCCAACCGTCAAATTTTCCCTTAA GATCCATCAAACCGTCTAAACGAACAAAAACATTCCACCACCGAAAGGGT TCTGTGAAATTTCAGATTTCCCTAAAAAATTCGGGAAGTTTTCAATATTT TTGCCCTATTCCGAAATTCTGACCTATTTTTTAGCTATTTTCCATTTTTC CAGACTAAAACAACCTAAATTTCCGTCTCGCATATTGGACCTAGTTTCCG CAATTCTTTGATGGAATCGAATTTAAACGAGACAAATTTAATTTGTTGTT CTACGGGCAGTTCGTTAGCAAAATAGTCTGTCGGCAAAATAAAAATAAGA TTTTCATTTTAACCAAGGAAGGTGTAATTAGGCATTAAGTAATTTTTTCA AACAATCTTAGTCGAAAATTCATCATTCATCTTTGTAATAACATTTTTTG TGCATAGAATTTATGATTCTAGATTCTTTTCAACTTTTTTTAAGTGTAAA TGTTTTTAATGACTAGTATTAGAAATTTGTGGCATAGGAAATTCAATACT TTTTTTTTCGTTTGCAGCAAATGCTGGGTCGGTCGGTCATGCCCTTAGAA CAACAAATTCAATTGGTCTCGCCTTATATGATAAATTTTCATACTTTCAG TTTACCAGAACACCAAAGACAAGTATGACTACATTAGACAACACCACCCC CAAAGTACGTATAGACAATTTAATAATATCCCAAAACTTACGGTATATTT GATTGTGACAACCTGTCCTTCTTTCTTTAAGCCAGTCGCTTGCCATCAAA ACCTGTAAATTAAAATGGGGGATTTCAACTTTCATTTATCTAATATTAGC AGGTTTATGTATTCGGGTTAAATCGAAGGAGATGGTATTAAAAAAGTTAG CATGTCAACAAATTCGCCGTCCACTTTGCTCGACGCCGGCTCGACGACGG TAAAAATACCAAGACACAGCCGGCTGTTTAGGTGAGCAAAGACGATAGAG CTGTACATCAACTATCGAACTTTTTTTGCATCAATTTCACTTACCGTCGC CTGATATCCTCCGATACATAAACTCGCTACTATCGATCGAGAACTCATAT CGGCATGAAAAACTTATATTTTGAAGTTAATTTCTGGTCAATTTTCTTTC CTTCCTAATCCAGTCTAAGTGAAAACTGAAGTTAAAAGCCTTCATTATTT TTGATATTTTGTGAGAAATATTCATAATTACATTTTTACAACTACTAATT AATTAAATTTTAGCAGTGGTCAAAATAGCAAAGAATATCTTCGAATTAAA TTCGAAAGAAACTCAGCATCTGAAAACAGGTATGAGAACAAAACCTTATT GAAGAAACCTATTTATAAGATAATTTTTAACGCAGCATACAAAGATTTAA TTTTTCTAAACATAACCTACTAGCCGCGTTGTTGGCAAATTTGAAAGAGC CATCCCCCAGCGGACCTTAGAATTACGCAATCACGCAAATTTTTTTCCCA AATTCACGCATTCACGCAATGATTTTTTCGCAATTCACGCAATTTTTGTT CACGCAAAGCTTTCCAATTTACGCATTCACGCAGTTTTTTTATTTTTGAC GCATTCACGCAAGTGAAAAAGCCCATTCACGCAAACCACTGGGGGCATGA AAATATACGTTAGATTTTACTCAAGAAATCTCTCAAGTTTATGGATCAGC TGAATTAATGAACTTGTAGATTAACTGAAAATTTATAAACACATTTCTCT CAAATTTTAGATGCAACAAAAGAAATAGAAAAGAATGAAAAGAAAATAGA AGAAAAGATAATAGAAGAAAAGAAAGTAGAAGAAAAGCAAGGAGCTGGAG ATATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032420XLOC_032420Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051143-exon-scaffold_199-1575043694:54179..54226TCONS_00051143-exon-scaffold_199-1575043694:54179..54226Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1575043694:51548..51597TCONS_00051143-exon-scaffold_199-1575043694:51548..51597Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1575043694:43036..43110TCONS_00051143-exon-scaffold_199-1575043694:43036..43110Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1575043694:39314..39366TCONS_00051143-exon-scaffold_199-1575043694:39314..39366Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1575043694:37973..38026TCONS_00051143-exon-scaffold_199-1575043694:37973..38026Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1575043694:37348..37410TCONS_00051143-exon-scaffold_199-1575043694:37348..37410Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1575043694:36822..36916TCONS_00051143-exon-scaffold_199-1575043694:36822..36916Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1510915933:54179..54226TCONS_00051143-exon-scaffold_199-1510915933:54179..54226Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1510915933:51548..51597TCONS_00051143-exon-scaffold_199-1510915933:51548..51597Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1510915933:43036..43110TCONS_00051143-exon-scaffold_199-1510915933:43036..43110Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1510915933:39314..39366TCONS_00051143-exon-scaffold_199-1510915933:39314..39366Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1510915933:37973..38026TCONS_00051143-exon-scaffold_199-1510915933:37973..38026Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1510915933:37348..37410TCONS_00051143-exon-scaffold_199-1510915933:37348..37410Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1510915933:36822..36916TCONS_00051143-exon-scaffold_199-1510915933:36822..36916Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1491911889:54179..54226TCONS_00051143-exon-scaffold_199-1491911889:54179..54226Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1491911889:51548..51597TCONS_00051143-exon-scaffold_199-1491911889:51548..51597Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1491911889:43036..43110TCONS_00051143-exon-scaffold_199-1491911889:43036..43110Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1491911889:39314..39366TCONS_00051143-exon-scaffold_199-1491911889:39314..39366Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1491911889:37973..38026TCONS_00051143-exon-scaffold_199-1491911889:37973..38026Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1491911889:37348..37410TCONS_00051143-exon-scaffold_199-1491911889:37348..37410Clytia hemisphaericaexon
TCONS_00051143-exon-scaffold_199-1491911889:36822..36916TCONS_00051143-exon-scaffold_199-1491911889:36822..36916Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_199supercontigscaffold_199:36822..54226 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.7458 6.61825 0.976647 7.51363 23.2461 16.5241 9.83791 12.8632 6.3471 10.1685 7.96682 5.04968 10.5079 9.75581 2.61946 2.68398 4.92565 4.21612 4.61162 10.3463 0.431703 0 2.58938 5.07971 4.1623 7.5282 10.4088 0.585339 1.71431 2.65552
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051143 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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