TCONS_00050883 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050883
Unique NameTCONS_00050883
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1540

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050883 ID=TCONS_00050883|Name=TCONS_00050883|organism=Clytia hemisphaerica|type=transcript|length=1540bp
ATTTTTCAGCGTTTCGAGATGTTTTATTGCCACCTACTTTTATTCATTtg
tgatatttttgttttggcaTTCTCACCTAATGTTCAATACCACGCACCAC
ATCAAAACGCTTCGTTCAACTATAGTTACATTAATCTCAAGTATTTGAAA
GGACAAAAATTGAACGTCACACCTTTGGCAACTTACAGCGTTAACAATAG
ATCACATTGTGTAAAAGAATGTGTTAAGACAAAAGGGGAATGTAAAAGTT
TGAATCTTCAACAAGTGACGAATGGATTTGAGTGTGAGATACTTGATCAA
GATATTTACGTTGCTAGTGTAAAACTAGTGAGTAGTAGCAATACGACACA
TACTTTGATATCTagCAAATGTTTATCAAACCCATGCAAACTAAAAATTG
GTTTCAAATGCATACCAAATTATATGAATAATACGTACCAATGTGCTCCA
CAAAGCTGTAAAGCTTTGAAGAAAGATGATCCTTCACTGCGTTCCagttt
ttatcatgttttcctTGCGGGAAAAATAAGAAAGGTCTACTGCGATATGG
AAAAAGACGGAGGAGGCTGGATGCTTATCGCAAATTATACTATCCCATCA
ACAGAAATTACACAAGCATTCAACTATGGTGACCTCGATGCATTCGAAGA
GCTGGCAactgggaatttttttttagactCAAACGTCTACCTCCCAATCA
TCAATGCTTGGTTTCCCATCAACGAATTCAGATGTTACTGCTACAAACCG
TCAGTTGGTAGAATCGTTGATTTAGCGACAGATCCATCAACCGATTTGGG
ATCTTACATAAATCGTTTCATTCTTGGTAAAGAACCTAAGAAAATATGTT
CTCCACCATGTGGTCTTAGAAGCTTGCCAAACGACCAAAGTGAGTTGATT
CATCAAGTGACTTCTATAGGCTGGGGAATAACAGCCCAGTATCTTTATCG
TGCTCCATTTCTCAAAGGAGACAATATCCATATTCTTCTTTGGCGCTATA
AGCAACGATACGAATGTGACGATGTGACTGACCAGCTTTATAGTGATTCA
GATTATTATAATACATTTTATGCTGGTAATTGGAAGTACTATATCAGATG
AAAACTTTCTATGAACTTTTACACTTTTGACACTCAAGCCTGTCAGATGT
GACGATGTcagttttttgtatttttgtattctactttaagggaagaaact
ttcgcggaaCACGAAAAGGCAAATTCgcaaattttcactaattttgtGAA
AGAGGGCTAAACCCTTACTTTCTTCACTCCCATCAATCTAAAATGTGTGT
CAAAATTACTTTTTGAATTGCTTTAacgaaaatttcatggcaaaaggcAG
ATATTTAGGTAAAGTAGTTTTTTtgcgagaattaattttcgcaaatATGA
GGTTTTCacgcgaaagtttctttccaccaaaatttctttccttggTATAC
GCTAgcaatgttttaattttttagcacttttaaagttttgcacaattaat
tctaataaaaaacagaattttGAACACCATCATGTTAGAG
Run BLAST on NCBI

protein sequence of TCONS_00050883-protein

>TCONS_00050883-protein ID=TCONS_00050883-protein|Name=TCONS_00050883-protein|organism=Clytia hemisphaerica|type=polypeptide|length=366bp
IFQRFEMFYCHLLLFICDIFVLAFSPNVQYHAPHQNASFNYSYINLKYLK
GQKLNVTPLATYSVNNRSHCVKECVKTKGECKSLNLQQVTNGFECEILDQ
DIYVASVKLVSSSNTTHTLISSKCLSNPCKLKIGFKCIPNYMNNTYQCAP
QSCKALKKDDPSLRSSFYHVFLAGKIRKVYCDMEKDGGGWMLIANYTIPS
TEITQAFNYGDLDAFEELATGNFFLDSNVYLPIINAWFPINEFRCYCYKP
SVGRIVDLATDPSTDLGSYINRFILGKEPKKICSPPCGLRSLPNDQSELI
HQVTSIGWGITAQYLYRAPFLKGDNIHILLWRYKQRYECDDVTDQLYSDS
DYYNTFYAGNWKYYIR
Run BLAST on NCBI

transcript from alignment at scaffold_19:607779..612168+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050883 ID=TCONS_00050883|Name=TCONS_00050883|organism=Clytia hemisphaerica|type=transcript|length=4390bp|location=Sequence derived from alignment at scaffold_19:607779..612168+ (Clytia hemisphaerica)
ATTTTTCAGCGTTTCGAGATGTTTTATTGCCACCTACTTTTATTCATTtg tgatatttttgttttggcaTTCTCACCTAATGTTCAATACCACGCACCAC ATCAAAACGCTTCGTTCAACTATAGTTACATTAATCTCAAGTATTTGAAA GGACAAAAATTGAACGTCACACCTTTGGCAACTTACAGCGTTAACAATAG ATCACATTGTGTAAAAGAATGTGTTAAGACAAAAGGGGAATGTAAAAGTT TGAATCTTCAACAAGTGACGAATGGATTTGAGTGTGAGATACTTGATCAA GATATTTACGTTGCTAGTGTAAAACTAGTGAGTAGTAGCAATACGACACA TACTTTGATATCTgtaagttttttctttccacaAGTTAAacgatattttt gataaaaagatatagAATACACTTTTACGACTCTACGGTGCCACttcatt atttaattatccccctaaattagatccaatccttttttgacacatttttc tatcgTGTATAGGTGCGCAAAAAGGACTGGgatggttttagtgggataaa gcggacaaaaaatgcccgagcggcaattggcggctacggtctaAAAGGTG TATTGCACTGAAAATGTATCaatttttatcataatttgTTACTAAAATTG TCATCATTTCCAATGTGTGAAAATTATCTGTTAAAGTTAATTTCATCGAG AGAATTTTACGTCAGGAATTTAAATATTCTTCTATGAGGTTAAACTTTCA ATACTCCATATTTTAGGAGCCATTATAGAAAATAACGGACGAAAAACTCA ATGGgatttgatatttgttttttatggctggggggttaaattccattgtt tttgagccagaaaattcaatggggggggggggggggaaaaaaaaaaaaat tttaaaaatttttttaaagctatttttttttttttttggctggggattta aaatccattttttttgagaaaaaaaaaaaagggggggggggggtggaaaa aatatacgatattttgacaatttttttccagctgaatttttttatctttt tagagCAAATGTTTATCAAACCCATGCAAACTAAAAATTGGTTTCAAATG CATACCAAATTATATGAATAATACGTACCAATGTGCTCGTAAGTAGAGCt ctattttggaaaaagttcTCTTAACTATGGTAGATATTCAACTTATTCTT TGGATATCTTAGCAGCCTTTACATTGGCATCAGCGATCTGAGAAATTCAT CACTGATTAAGTTTATTCAGAATAATTCTTAGGAATTTATATAGATACTT AtagaaatacttatagaatacAGATGTTCTGAATTTGTATTCGTGTGGTT TTAATTTCGCAAATGAGCAGAAAATCAGCTGAAGatggaaaaactaaaga tgcCAAATTTTACTCAAAATAGAACAGTGCTTTTTGTATCcgaaataaga ttttcaaaatttcgcgtggatttactATTTTTGCCACTTTGCAAAATTTA gaccccttttctatttgcatTAGATCTGGGAGGTTGAATGCTGAGGTTGA GCACGTCACACCTAGTAACTTGCCGCCTCGGtaagattacccaatctaag cttcTCATTCGCTAAGTTAGCGGCGACGGGGGATTGACCCATTAACCCTT AGATTGTAAAGCAAATGCTCTACAGACTAAGGTATCTGACAACTATGTGA TGTAAGTGTAATATCAAAGAATGGTGCGTTCGATTAAAAGTtgtcttaat ttttttcagCACAAAGCTGTAAAGCTTTGAAGAAAGATGATCCTTCACTG CGTTCCagtttttatcatgttttcctTGCGGGAAAAATAAGAAAGGTCTA CTGCGATATGGAAAAAGACGGAGGTAACTTattcattgatttttttgttg aaaatgtcaataaaaaatgaagaaatatttATAGTTACGTAAATTCTACC AATTTCGATCTAGGCAGGATATTTGCAGAGGATCAGTTACAACTTAAGGG CTTTGACCATAGTCAGAATATTTGTCAAGGGGTTTGaacataaaactttt gttttgggtttcttgacacttttaacaaaaaattgcctttaCAAGTTGTT TGGTAATTTATTCTGTCAATACATAgtgtaattaagaatttaatcaCAAA AACGACGTTGtgaacttaaaaaaaacgttttaataGAATGTTCTATTACC CTcttttatacagggtgtccctaataaaagtatcgagtttgaacatgcga ttgattaaaaaagtttgtgtgtgttatcgctaaaatatagaacgttctcc atcacataggctcattacaaaaggtagttacaacgtataaattaatcaat agcccttttactattcccctgttgcataaatgtacgtctttaNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNttacttttttattgttccatacattccatttttattatt ttcatagttttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtttt tattgttacgtaatgacaaagaaaaaagagggagagcttaaaatacaatt ttgtgaatacacacttaaaactttctactcaatcgcatgttcaaactgga tacttttattagggacaccctgtataaaaaagtttcaatgggtaattaac ttttttcctttgaatttttttaaattttccgtaaagaattgaactatttg aattttttggaaaaattttctaattcgATCTATAAAAAATTATAACAGTT TTTCTACGAAAAATTAGGAtgaaagattggtcaaaaaccgcttttttcaa gattttgagacaaagaagcttttactaaaattttcatcgtttggttaaag atacacctTCTGACCGTAGAAATCTTTTCGAAAGGTTTTGTCTTCGTCAA AAATAaggtcttcaaagttgaaatactgctcttcgcaaaagtcttcattt tctccttcattaatttttttcattgcgtattttaaattttgagattcagg aatagttgacctaacagaaaatgtataacatatcATAGTTTTGTTGGCTA CATCAGGTATAATGCATTAAAAGGTCTtatgaataattaaaaaaaaatac tttaatttcTAGGAGGCTGGATGCTTATCGCAAATTATACTATCCCATCA ACAGAAATTACACAAGCATTCAACTATGGTGACCTCGATGCATTCGAAGA GCTGGCAactgggaatttttttttagactCAAACGTCTACCTCCCAATCA TCAATGCTTGGTTTCCCATCAACGAATTCAGATGTTACTGCTACAAACCG TCAGTTGGTAGAATCGTTGATTTAGCGACAGATCCATCAACCGATTTGGG ATCTTACATAAATCGTTTCATTCTTGGTAAAGAACCTAAGAAAATATGTT CTCCACCATGTGGTCTTAGAAGCTTGCCAAACGACCAAAGTGAGTTGATT CATCAAGTGACTTCTATAGGCTGGGGAATAACAGCCCAGTATCTTTATCG TGCTCCATTTCTCAAAGGAGACAATATCCATATTCTTCTTTGGCGCTATA AGCAACGATACGAATGTGACGATGTGACTGACCAGCTTTATAGTGATTCA GATTATTATAATACATTTTATGCTGGTAATTGGAAGTACTATATCAGATG AAAACTTTCTATGAACTTTTACACTTTTGACACTCAAGCCTGTCAGATGT GACGATGTcagttttttgtatttttgtattctactttaagggaagaaact ttcgcggaaCACGAAAAGGCAAATTCgcaaattttcactaattttgtGAA AGAGGGCTAAACCCTTACTTTCTTCACTCCCATCAATCTAAAATGTGTGT CAAAATTACTTTTTGAATTGCTTTAacgaaaatttcatggcaaaaggcAG ATATTTAGGTAAAGTAGTTTTTTtgcgagaattaattttcgcaaatATGA GGTTTTCacgcgaaagtttctttccaccaaaatttctttccttggTATAC GCTAgcaatgttttaattttttagcacttttaaagttttgcacaattaat tctaataaaaaacagaattttGAACACCATCATGTTAGAG

Coding sequence (CDS) from alignment at scaffold_19:607779..612168+

>TCONS_00050883 ID=TCONS_00050883|Name=TCONS_00050883|organism=Clytia hemisphaerica|type=CDS|length=4404bp|location=Sequence derived from alignment at scaffold_19:607779..612168+ (Clytia hemisphaerica)
ATTTTTCAGCGTTTCGAGATGTTTTATTGCCACCTACTTTTATTCATTtg
tgatatttttgttttggcaTTCTCACCTAATGTTCAATACCACGCACCAC
ATCAAAACGCTTCGTTCAACTATAGTTACATTAATCTCAAGTATTTGAAA
GGACAAAAATTGAACGTCACACCTTTGGCAACTTACAGCGTTAACAATAG
ATCACATTGTGTAAAAGAATGTGTTAAGACAAAAGGGGAATGTAAAAGTT
TGAATCTTCAACAAGTGACGAATGGATTTGAGTGTGAGATACTTGATCAA
GATATTTACGTTGCTAGTGTAAAACTAGTGAGTAGTAGCAATACGACACA
TACTTTGATATCTagCAAATGTTTATCAAACCCATGCAAACTAAAAATTG
GTTTCAAATGCATACCAAATTATATGAATAATACGTACCAATGTGCTCCA
CAAAGCTGTAAAGCTTTGAAGAAAGATGATCCTTCACTGCGTTCCagttt
ttatcatgttttcctTGCGGGAAAAATAAGAAAGGTCTACTGCGATATGG
AAAAAGACGGAGGAGGCTGGATGCTTATCGCAAATTATACTATCCCATCA
ACAGAAATTACACAAGCATTCAACTATGGTGACCTCGATGCATTCGAAGA
GCTGGCAactgggaatttttttttagactCAAACGTCTACCTCCCAATCA
TCAATGCTTGGTTTCCCATCAACGAATTCAGATGTTACTGCTACAAACCG
TCAGTTGGTAGAATCGTTGATTTAGCGACAGATCCATCAACCGATTTGGG
ATCTTACATAAATCGTTTCATTCTTGGTAAAGAACCTAAGAAAATATGTT
CTCCACCATGTGGTCTTAGAAGCTTGCCAAACGACCAAAGTGAGTTGATT
CATCAAGTGACTTCTATAGGCTGGGGAATAACAGCCCAGTATCTTTATCG
TGCTCCATTTCTCAAAGGAGACAATATCCATATTCTTCTTTGGCGCTATA
AGCAACGATACGAATGTGACGATGTGACTGACCAGCTTTATAGTGATTCA
GATTATTATAATACATTTTATGCTGGTAATTGGAAGTACTATATCAGATG
AATTTTTCAGCGTTTCGAGATGTTTTATTGCCACCTACTTTTATTCATTt
gtgatatttttgttttggcaTTCTCACCTAATGTTCAATACCACGCACCA
CATCAAAACGCTTCGTTCAACTATAGTTACATTAATCTCAAGTATTTGAA
AGGACAAAAATTGAACGTCACACCTTTGGCAACTTACAGCGTTAACAATA
GATCACATTGTGTAAAAGAATGTGTTAAGACAAAAGGGGAATGTAAAAGT
TTGAATCTTCAACAAGTGACGAATGGATTTGAGTGTGAGATACTTGATCA
AGATATTTACGTTGCTAGTGTAAAACTAGTGAGTAGTAGCAATACGACAC
ATACTTTGATATCTagCAAATGTTTATCAAACCCATGCAAACTAAAAATT
GGTTTCAAATGCATACCAAATTATATGAATAATACGTACCAATGTGCTCC
ACAAAGCTGTAAAGCTTTGAAGAAAGATGATCCTTCACTGCGTTCCagtt
tttatcatgttttcctTGCGGGAAAAATAAGAAAGGTCTACTGCGATATG
GAAAAAGACGGAGGAGGCTGGATGCTTATCGCAAATTATACTATCCCATC
AACAGAAATTACACAAGCATTCAACTATGGTGACCTCGATGCATTCGAAG
AGCTGGCAactgggaatttttttttagactCAAACGTCTACCTCCCAATC
ATCAATGCTTGGTTTCCCATCAACGAATTCAGATGTTACTGCTACAAACC
GTCAGTTGGTAGAATCGTTGATTTAGCGACAGATCCATCAACCGATTTGG
GATCTTACATAAATCGTTTCATTCTTGGTAAAGAACCTAAGAAAATATGT
TCTCCACCATGTGGTCTTAGAAGCTTGCCAAACGACCAAAGTGAGTTGAT
TCATCAAGTGACTTCTATAGGCTGGGGAATAACAGCCCAGTATCTTTATC
GTGCTCCATTTCTCAAAGGAGACAATATCCATATTCTTCTTTGGCGCTAT
AAGCAACGATACGAATGTGACGATGTGACTGACCAGCTTTATAGTGATTC
AGATTATTATAATACATTTTATGCTGGTAATTGGAAGTACTATATCAGAT
GAATTTTTCAGCGTTTCGAGATGTTTTATTGCCACCTACTTTTATTCATT
tgtgatatttttgttttggcaTTCTCACCTAATGTTCAATACCACGCACC
ACATCAAAACGCTTCGTTCAACTATAGTTACATTAATCTCAAGTATTTGA
AAGGACAAAAATTGAACGTCACACCTTTGGCAACTTACAGCGTTAACAAT
AGATCACATTGTGTAAAAGAATGTGTTAAGACAAAAGGGGAATGTAAAAG
TTTGAATCTTCAACAAGTGACGAATGGATTTGAGTGTGAGATACTTGATC
AAGATATTTACGTTGCTAGTGTAAAACTAGTGAGTAGTAGCAATACGACA
CATACTTTGATATCTagCAAATGTTTATCAAACCCATGCAAACTAAAAAT
TGGTTTCAAATGCATACCAAATTATATGAATAATACGTACCAATGTGCTC
CACAAAGCTGTAAAGCTTTGAAGAAAGATGATCCTTCACTGCGTTCCagt
ttttatcatgttttcctTGCGGGAAAAATAAGAAAGGTCTACTGCGATAT
GGAAAAAGACGGAGGAGGCTGGATGCTTATCGCAAATTATACTATCCCAT
CAACAGAAATTACACAAGCATTCAACTATGGTGACCTCGATGCATTCGAA
GAGCTGGCAactgggaatttttttttagactCAAACGTCTACCTCCCAAT
CATCAATGCTTGGTTTCCCATCAACGAATTCAGATGTTACTGCTACAAAC
CGTCAGTTGGTAGAATCGTTGATTTAGCGACAGATCCATCAACCGATTTG
GGATCTTACATAAATCGTTTCATTCTTGGTAAAGAACCTAAGAAAATATG
TTCTCCACCATGTGGTCTTAGAAGCTTGCCAAACGACCAAAGTGAGTTGA
TTCATCAAGTGACTTCTATAGGCTGGGGAATAACAGCCCAGTATCTTTAT
CGTGCTCCATTTCTCAAAGGAGACAATATCCATATTCTTCTTTGGCGCTA
TAAGCAACGATACGAATGTGACGATGTGACTGACCAGCTTTATAGTGATT
CAGATTATTATAATACATTTTATGCTGGTAATTGGAAGTACTATATCAGA
TGAATTTTTCAGCGTTTCGAGATGTTTTATTGCCACCTACTTTTATTCAT
TtgtgatatttttgttttggcaTTCTCACCTAATGTTCAATACCACGCAC
CACATCAAAACGCTTCGTTCAACTATAGTTACATTAATCTCAAGTATTTG
AAAGGACAAAAATTGAACGTCACACCTTTGGCAACTTACAGCGTTAACAA
TAGATCACATTGTGTAAAAGAATGTGTTAAGACAAAAGGGGAATGTAAAA
GTTTGAATCTTCAACAAGTGACGAATGGATTTGAGTGTGAGATACTTGAT
CAAGATATTTACGTTGCTAGTGTAAAACTAGTGAGTAGTAGCAATACGAC
ACATACTTTGATATCTagCAAATGTTTATCAAACCCATGCAAACTAAAAA
TTGGTTTCAAATGCATACCAAATTATATGAATAATACGTACCAATGTGCT
CCACAAAGCTGTAAAGCTTTGAAGAAAGATGATCCTTCACTGCGTTCCag
tttttatcatgttttcctTGCGGGAAAAATAAGAAAGGTCTACTGCGATA
TGGAAAAAGACGGAGGAGGCTGGATGCTTATCGCAAATTATACTATCCCA
TCAACAGAAATTACACAAGCATTCAACTATGGTGACCTCGATGCATTCGA
AGAGCTGGCAactgggaatttttttttagactCAAACGTCTACCTCCCAA
TCATCAATGCTTGGTTTCCCATCAACGAATTCAGATGTTACTGCTACAAA
CCGTCAGTTGGTAGAATCGTTGATTTAGCGACAGATCCATCAACCGATTT
GGGATCTTACATAAATCGTTTCATTCTTGGTAAAGAACCTAAGAAAATAT
GTTCTCCACCATGTGGTCTTAGAAGCTTGCCAAACGACCAAAGTGAGTTG
ATTCATCAAGTGACTTCTATAGGCTGGGGAATAACAGCCCAGTATCTTTA
TCGTGCTCCATTTCTCAAAGGAGACAATATCCATATTCTTCTTTGGCGCT
ATAAGCAACGATACGAATGTGACGATGTGACTGACCAGCTTTATAGTGAT
TCAGATTATTATAATACATTTTATGCTGGTAATTGGAAGTACTATATCAG
ATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032248XLOC_032248Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050883-exon-scaffold_19-1491911889:607779..608141TCONS_00050883-exon-scaffold_19-1491911889:607779..608141Clytia hemisphaericaexon
TCONS_00050883-exon-scaffold_19-1510915933:607779..608141TCONS_00050883-exon-scaffold_19-1510915933:607779..608141Clytia hemisphaericaexon
TCONS_00050883-exon-scaffold_19-1575043694:607779..608141TCONS_00050883-exon-scaffold_19-1575043694:607779..608141Clytia hemisphaericaexon
TCONS_00050883-exon-scaffold_19-1491911889:608832..608916TCONS_00050883-exon-scaffold_19-1491911889:608832..608916Clytia hemisphaericaexon
TCONS_00050883-exon-scaffold_19-1510915933:608832..608916TCONS_00050883-exon-scaffold_19-1510915933:608832..608916Clytia hemisphaericaexon
TCONS_00050883-exon-scaffold_19-1575043694:608832..608916TCONS_00050883-exon-scaffold_19-1575043694:608832..608916Clytia hemisphaericaexon
TCONS_00050883-exon-scaffold_19-1491911889:609538..609651TCONS_00050883-exon-scaffold_19-1491911889:609538..609651Clytia hemisphaericaexon
TCONS_00050883-exon-scaffold_19-1510915933:609538..609651TCONS_00050883-exon-scaffold_19-1510915933:609538..609651Clytia hemisphaericaexon
TCONS_00050883-exon-scaffold_19-1575043694:609538..609651TCONS_00050883-exon-scaffold_19-1575043694:609538..609651Clytia hemisphaericaexon
TCONS_00050883-exon-scaffold_19-1491911889:611191..612168TCONS_00050883-exon-scaffold_19-1491911889:611191..612168Clytia hemisphaericaexon
TCONS_00050883-exon-scaffold_19-1510915933:611191..612168TCONS_00050883-exon-scaffold_19-1510915933:611191..612168Clytia hemisphaericaexon
TCONS_00050883-exon-scaffold_19-1575043694:611191..612168TCONS_00050883-exon-scaffold_19-1575043694:611191..612168Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050883-proteinTCONS_00050883-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:607779..612168 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.71881 2.85921 3.98377 4.72424 2.87566 1.47705 1.3365 1.28329 0.449232 0.751203 0.837156 0.763338 2.03865 1.54644 1.07462 0.568497 0.320156 0.246112 2.18178 1.74937 0.438116 0.641093 2.10878 2.2784 1.2592 1.22597 8.47942 7.87928 0.562113 0.542562
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014716Fibrinogen_a/b/g_C_1
IPR002181Fibrinogen_a/b/g_C_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050883 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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