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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050767 ID=TCONS_00050767|Name=TCONS_00050767|organism=Clytia hemisphaerica|type=transcript|length=1265bp
TAATGGACGAACATAATGCAGCAGGATTGCGCCGAGATGAAAATCATCAA
GCTGCTGTGTCTTCTATTGGAGGAgaaaaaacacaacaaaatctcaaaga
agaacttgaaagtttgaagaaagacagagaaattgaaaaactaaaatttg
aaaaagaaattgaaacccTGAAAGCAGTAATCGAgaaattgaaacttgaa
aatacaatggaaaaatTGAAATCTGAAAATACTTTCTTGAAAGCTGAAAA
ACAATTTGGCATCGACTTGAAAGCAATTTCAGATGACAAGCAGAATATCG
AAGAAGAGTTGAAATCTGCTAAGATTGAAAACGCGAAATTTCgacaacaa
aatgaaaatctcaTCGAGGAAAATAAGAGATTTGAGGAGAATTTAAAGGA
GGTTGAAGCTGAGAACCAGAATTTCATTCAAGAAAACACAACTTTGAAAG
CAAATGAAGCTAAGATTACAGATGAGCTAAAAACTTTGAAGATGGAGAAA
ACTCAAATGTTAGATAGTATccaaaaattgaaggaaaaaaacaaaaaaaa
agaaaacaaaggtGCTCGGaaaaaacagtttcaaaaaGCAGAGGTCTTGA
AAACAGCAGAGAAAAACGAGGTCAATAAAGATGAAGAGCCCGACTATAGC
CGAATGCCGCTTGAAGAATCAATTCTTTCCGGTTCTTACATGATCTTCGA
GGAGGAGTTTTACCCTGGTTACGAAAACTGGTATACCAATATGTATAAAA
GATCAAATTTTTATGTAACATTCAAAAATTGTAGAGTTCATATTAAACAc
ttcatcaaaacaaacatttatATTAACATAGAATGGACTTTTGACAACTT
GAAGTGTGCCAAACTTCTGCATCCAAAAGATaatagaaaatcaaaagatC
TTGATCATATAGGAGGCAAGGAATGGATGACTGTCGTCAACGGTCTGACA
GAGGAATTTAGATATGAAGGGTTCGTTTTGATACTTATAATGAGAAATTC
TAATGAATAAACATTTCTATATCTCGAAACTTGTTAAATTGCGACACTGT
ACCtttcagaaatttcattttctttaataTCTTTCCCATCATCGAAAAGA
CTGGAAATGAACGCATGCTTCTTATAATAATTGATATCAAGATGTAAACC
AACCCTTAACAAAGCGTGGGTTGGTAATAACACAGACAGCTGGTTATCGA
Attatagttttttattttttctcattttcgttcgttgttcaaggataaaa
aaatatgaaaacccT Run BLAST on NCBI protein sequence of TCONS_00050767-protein >TCONS_00050767-protein ID=TCONS_00050767-protein|Name=TCONS_00050767-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MDEHNAAGLRRDENHQAAVSSIGGEKTQQNLKEELESLKKDREIEKLKFE
KEIETLKAVIEKLKLENTMEKLKSENTFLKAEKQFGIDLKAISDDKQNIE
EELKSAKIENAKFRQQNENLIEENKRFEENLKEVEAENQNFIQENTTLKA
NEAKITDELKTLKMEKTQMLDSIQKLKEKNKKKENKGARKKQFQKAEVLK
TAEKNEVNKDEEPDYSRMPLEESILSGSYMIFEEEFYPGYENWYTNMYKR
SNFYVTFKNCRVHIKHFIKTNIYINIEWTFDNLKCAKLLHPKDNRKSKDL
DHIGGKEWMTVVNGLTEEFRYEGFVLILIMRNSNE Run BLAST on NCBI transcript from alignment at scaffold_185:128918..130182 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050767 ID=TCONS_00050767|Name=TCONS_00050767|organism=Clytia hemisphaerica|type=transcript|length=1265bp|location=Sequence derived from alignment at scaffold_185:128918..130182 (Clytia hemisphaerica)
Agggttttcatatttttttatccttgaacaacgaacgaaaatgagaaaaa
ataaaaaactataaTTCGATAACCAGCTGTCTGTGTTATTACCAACCCAC
GCTTTGTTAAGGGTTGGTTTACATCTTGATATCAATTATTATAAGAAGCA
TGCGTTCATTTCCAGTCTTTTCGATGATGGGAAAGAtattaaagaaaatg
aaatttctgaaaGGTACAGTGTCGCAATTTAACAAGTTTCGAGATATAGA
AATGTTTATTCATTAGAATTTCTCATTATAAGTATCAAAACGAACCCTTC
ATATCTAAATTCCTCTGTCAGACCGTTGACGACAGTCATCCATTCCTTGC
CTCCTATATGATCAAGatcttttgattttctattATCTTTTGGATGCAGA
AGTTTGGCACACTTCAAGTTGTCAAAAGTCCATTCTATGTTAATataaat
gtttgttttgatgaagTGTTTAATATGAACTCTACAATTTTTGAATGTTA
CATAAAAATTTGATCTTTTATACATATTGGTATACCAGTTTTCGTAACCA
GGGTAAAACTCCTCCTCGAAGATCATGTAAGAACCGGAAAGAATTGATTC
TTCAAGCGGCATTCGGCTATAGTCGGGCTCTTCATCTTTATTGACCTCGT
TTTTCTCTGCTGTTTTCAAGACCTCTGCtttttgaaactgttttttCCGA
GCacctttgttttctttttttttgtttttttccttcaatttttggATACT
ATCTAACATTTGAGTTTTCTCCATCTTCAAAGTTTTTAGCTCATCTGTAA
TCTTAGCTTCATTTGCTTTCAAAGTTGTGTTTTCTTGAATGAAATTCTGG
TTCTCAGCTTCAACCTCCTTTAAATTCTCCTCAAATCTCTTATTTTCCTC
GAtgagattttcattttgttgtcGAAATTTCGCGTTTTCAATCTTAGCAG
ATTTCAACTCTTCTTCGATATTCTGCTTGTCATCTGAAATTGCTTTCAAG
TCGATGCCAAATTGTTTTTCAGCTTTCAAGAAAGTATTTTCAGATTTCAa
tttttccattgtattttcaagtttcaatttcTCGATTACTGCTTTCAggg
tttcaatttctttttcaaattttagtttttcaatttctctgtctttcttc
aaactttcaagttcttctttgagattttgttgtgttttttcTCCTCCAAT
AGAAGACACAGCAGCTTGATGATTTTCATCTCGGCGCAATCCTGCTGCAT
TATGTTCGTCCATTA Coding sequence (CDS) from alignment at scaffold_185:128918..130182 >TCONS_00050767 ID=TCONS_00050767|Name=TCONS_00050767|organism=Clytia hemisphaerica|type=CDS|length=1008bp|location=Sequence derived from alignment at scaffold_185:128918..130182 (Clytia hemisphaerica)
TTATTCATTAGAATTTCTCATTATAAGTATCAAAACGAACCCTTCATATC
TAAATTCCTCTGTCAGACCGTTGACGACAGTCATCCATTCCTTGCCTCCT
ATATGATCAAGatcttttgattttctattATCTTTTGGATGCAGAAGTTT
GGCACACTTCAAGTTGTCAAAAGTCCATTCTATGTTAATataaatgtttg
ttttgatgaagTGTTTAATATGAACTCTACAATTTTTGAATGTTACATAA
AAATTTGATCTTTTATACATATTGGTATACCAGTTTTCGTAACCAGGGTA
AAACTCCTCCTCGAAGATCATGTAAGAACCGGAAAGAATTGATTCTTCAA
GCGGCATTCGGCTATAGTCGGGCTCTTCATCTTTATTGACCTCGTTTTTC
TCTGCTGTTTTCAAGACCTCTGCtttttgaaactgttttttCCGAGCacc
tttgttttctttttttttgtttttttccttcaatttttggATACTATCTA
ACATTTGAGTTTTCTCCATCTTCAAAGTTTTTAGCTCATCTGTAATCTTA
GCTTCATTTGCTTTCAAAGTTGTGTTTTCTTGAATGAAATTCTGGTTCTC
AGCTTCAACCTCCTTTAAATTCTCCTCAAATCTCTTATTTTCCTCGAtga
gattttcattttgttgtcGAAATTTCGCGTTTTCAATCTTAGCAGATTTC
AACTCTTCTTCGATATTCTGCTTGTCATCTGAAATTGCTTTCAAGTCGAT
GCCAAATTGTTTTTCAGCTTTCAAGAAAGTATTTTCAGATTTCAattttt
ccattgtattttcaagtttcaatttcTCGATTACTGCTTTCAgggtttca
atttctttttcaaattttagtttttcaatttctctgtctttcttcaaact
ttcaagttcttctttgagattttgttgtgttttttcTCCTCCAATAGAAG
ACACAGCAGCTTGATGATTTTCATCTCGGCGCAATCCTGCTGCATTATGT
TCGTCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050767-exon-scaffold_185-1491911889:128918..130182 | TCONS_00050767-exon-scaffold_185-1491911889:128918..130182 | Clytia hemisphaerica | exon |
| TCONS_00050767-exon-scaffold_185-1510915933:128918..130182 | TCONS_00050767-exon-scaffold_185-1510915933:128918..130182 | Clytia hemisphaerica | exon |
| TCONS_00050767-exon-scaffold_185-1575043694:128918..130182 | TCONS_00050767-exon-scaffold_185-1575043694:128918..130182 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_185 | supercontig | scaffold_185:128918..130182 . |
Blast
The following BLAST results are available for this feature:
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