TCONS_00050687 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050687
Unique NameTCONS_00050687
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length153

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050687 ID=TCONS_00050687|Name=TCONS_00050687|organism=Clytia hemisphaerica|type=transcript|length=153bp
CTCTCTTTTTCGACTTCAACTGGACTGATAGATTACAGAGTCATCAAAAG
GAATACAACAGCTAAAAAATGCAGCCAAACTGACAAAAAAGCaacaaatt
tcataatttctgtCATCTGCTAAACGccattttgaaagtttgtttatgtt
ttc
Run BLAST on NCBI

transcript from alignment at scaffold_182:146182..146334

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050687 ID=TCONS_00050687|Name=TCONS_00050687|organism=Clytia hemisphaerica|type=transcript|length=153bp|location=Sequence derived from alignment at scaffold_182:146182..146334 (Clytia hemisphaerica)
gaaaacataaacaaactttcaaaatggCGTTTAGCAGATGacagaaatta
tgaaatttgttGCTTTTTTGTCAGTTTGGCTGCATTTTTTAGCTGTTGTA
TTCCTTTTGATGACTCTGTAATCTATCAGTCCAGTTGAAGTCGAAAAAGA
GAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032116XLOC_032116Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050687-exon-scaffold_182-1491911889:146182..146334TCONS_00050687-exon-scaffold_182-1491911889:146182..146334Clytia hemisphaericaexon
TCONS_00050687-exon-scaffold_182-1510915933:146182..146334TCONS_00050687-exon-scaffold_182-1510915933:146182..146334Clytia hemisphaericaexon
TCONS_00050687-exon-scaffold_182-1575043694:146182..146334TCONS_00050687-exon-scaffold_182-1575043694:146182..146334Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_182supercontigscaffold_182:146182..146334 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050687 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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