TCONS_00050654 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050654
Unique NameTCONS_00050654
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length112

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050654 ID=TCONS_00050654|Name=TCONS_00050654|organism=Clytia hemisphaerica|type=transcript|length=112bp
TAGGTCTTGATTTATCTCTGGTTTATGGCCACCACAGAGACCCATCGGTC
AATTTCGGACAGATTTGATTGTACAGAGTCAAGTGTTGGTCGAATTGTGT
GGAAACTTTCAC
Run BLAST on NCBI

transcript from alignment at scaffold_181:32193..32304

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050654 ID=TCONS_00050654|Name=TCONS_00050654|organism=Clytia hemisphaerica|type=transcript|length=112bp|location=Sequence derived from alignment at scaffold_181:32193..32304 (Clytia hemisphaerica)
GTGAAAGTTTCCACACAATTCGACCAACACTTGACTCTGTACAATCAAAT
CTGTCCGAAATTGACCGATGGGTCTCTGTGGTGGCCATAAACCAGAGATA
AATCAAGACCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032093XLOC_032093Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050654-exon-scaffold_181-1491911889:32193..32304TCONS_00050654-exon-scaffold_181-1491911889:32193..32304Clytia hemisphaericaexon
TCONS_00050654-exon-scaffold_181-1510915933:32193..32304TCONS_00050654-exon-scaffold_181-1510915933:32193..32304Clytia hemisphaericaexon
TCONS_00050654-exon-scaffold_181-1575043694:32193..32304TCONS_00050654-exon-scaffold_181-1575043694:32193..32304Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_181supercontigscaffold_181:32193..32304 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050654 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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