TCONS_00050601 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050601
Unique NameTCONS_00050601
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2667

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050601 ID=TCONS_00050601|Name=TCONS_00050601|organism=Clytia hemisphaerica|type=transcript|length=2667bp
CGCATTCGTGTCATCGCGACAACAAGCTAAAGAAGTTGTGATTTGTTGTG
TGGGCTACGCGTACGATGGAAAGTCTTGCAGACCAGAATGTTTATCAAAA
CCGATCGGCCCGAGTCATACTGCAGTCACTAAAACCAATTGTGATGACAG
AGTGGAACTTGGTGATGAATGCGCCTCCGAATGCGAGGCCGTTCGTTATG
GGGTCCAGTACCCAGCCAGTTACTTTTGTTCAAATGTGGAGTGGTCTACT
TACAAAATCCAATTTCAATTCCTTACTATCGTCTCCGGTGTTCTTATGGA
ATCGGCATGCGATGATTGCAAATTAACAACCTTCAAAATTTTGTACAAAC
AGTCTATTAGCAGGAGTTGGATGAAATTGGCGTATCATGACTTACATCAA
ACTGAACGAGTACAATATTTTGAATTGAATCATACACTGGCTATCAAAAT
CTCATTTCAAAGCCTAACACCAGATCCTTACAAAATTCATTTGGAGCTCT
ACGGGTGTGCTTCGTACAAAGGTGCCTACCCTCTTGGACTTGAAAGTGGT
GCAATAAACGATGAACAGATTTATCAAGATGATTTTGATGGTGTAACATC
AAGTTATAACCCACAAAATGTGCGTTTAAACTCACCTCGACAGAACGGTT
GGAGACCATGGATTGACAGCATTGATAACGGTGTTGAGTATACCTTTGTA
TCGTTTAAACTCGATGACCTGGTAACTATAGATGCGTTAGATATCCAAGT
TGGTAATCTGGACGAAGAGAACAATGCAAATACATTCCATATCTCGTTTT
ATGATTACTGGAATGAAAATGCAGCAAAAGGACCATTACGTTATACGACA
ATACCTGAAAGAACCTCAAATGGTCAAGGGACTCCCTTGGATATCACTAC
CCCAGCATACAAAAAACCGTTCGAGACTTGGCGTTATGTTTTCCCATATC
CTATCTACACCAAACATCTCTATTATACCGTCCTCAACCATCAGACACCT
TTGTTCCACAAGATAGAGTTTATTGGGAAGAGAGGCTTCCACGCCGAACA
CTCATGGAAGATGGACCGTAATGACGTTTTTAAGGATATGGCTCGTAACC
ATCATTTTTATCCCACTCCTAAATACCGCCACTTANGATGGACCGTAATG
ACGTTTTTAAGGATATGGCTCGGAACCATCATTTTTATCCCACTCCTAAA
TACCACCACTTGGCTCCCGAGGGACCAATACAAGGATTTGCTGAGAGCAA
ATTATCAGATAATAATAGAGATGACCAGCCACTTCAATCTTTACCTTTCG
AAAATGATGACTGTTTGGTGAATGCTGATTATTGTAAGCATGGTACAACT
TTTCTCATGGCTGCTAGACTTGAGCGCGAGGGTCTATACTCTCGTAGCCT
ACTTATCAATGCTGATCTCAAAACAAGCTACGTGCCAATTCCTGCAAGCT
GTCAGCAGTTTAGTCTCAACAAACGTACTGCTTTTTACTTTCGCAATGTA
AAGATACCGAAACACGCCAAAATACATACCGCTAATTCTGGTCTCTATTA
TGATAACTTGCAAGTTACTCAGCGCTCTTCTAATGGTTATTTGTTCTTTA
ACGTGCGTATTTACATCGGGCTTGATGAAAACTTCgtcaaaagttgtcat
tatcGTTGGGATGTTGAAACGCATTTTTTACTAAGTGAGAATTTCCAATC
GAGGAAATTGGATACCAAATATTTTCGTCTTTTTCTTGGGAAAGAACTTC
AAAAAGTGTTCAACTCACCTTCGTGGAGATATGGCATGTCTATCATCATA
TACATTGAACCTATGCAAGATCTTCCCGCTTATGAAGTAATGGTAGAAAG
TCCCTGGTCTCTAAAGATATGGTATCAACAagTTTGTGACGATTTTAAGG
AGGATTTGGTGAACAATCTACCATTGTCGTCATTCAGTTACACAGGATCA
CCTGCTAATTGTGATGATCCAAGTTACATCAAATtcaatgatgaagaaaa
tcattGGACTCCGTGTGACGGATCTCATTTAGTCTTACAGCTTTCTGGTA
CACCACACGTGACTATGATAGCTATCAAAGGCCGACAAAGTGGATTTGTt
aagaaatttgaattgtttcaCAGCTTGGATGGTTCTCAGTATCATAAGAT
CAAATTTTCTTCTAAAAATtactttgaaaaattttcgagTCAATTGGAAT
ATCTTTCTTTTCCACATCCGATCCGTATGAAATGGATCAAGATCAATGTT
CTTGAAGTCATTGGTGATTCTCCGTCCATGAAACTCGATCTTATTGAATG
TCAAGCAACTCGAAATTTTTTCGATGACCACTCTAAGAAAAATTACCCGA
ATCTCATGAAGTATAGGCGCAGTATATCGATGGATGTCGGTGGAGGGAAT
TATCAAGGTTTTCTTTATTCGGATAAAAAAGCTGTATTTCATAAAAACGG
TGAAGTAGTAAGTCATACTTTGCATCCAGTATTGGACATTAATACGATTG
ATACTCGATCACCAAAGATGTATTATTTAAAGGATGGCGTAGGTGGTGAG
GTTTGGAAACTTTGGCATGACGACTCACGCCTTACAAGTAACACAAACCT
ATTTCTTGTGACAGTTACCACCCTTTACAAATTCGATGAAAACTACAGAG
CTATTGCATGGCCCCAA
Run BLAST on NCBI

transcript from alignment at scaffold_18:162970..174848+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050601 ID=TCONS_00050601|Name=TCONS_00050601|organism=Clytia hemisphaerica|type=transcript|length=11879bp|location=Sequence derived from alignment at scaffold_18:162970..174848+ (Clytia hemisphaerica)
CGCATTCGTGTCATCGCGACAACAAGCTAAAGAAGTTGTGATTTGTTGTG
TGGGCTACGCGTACGATGGAAAGTCTTGCAGACCAGGTAGATATTTACAT
ATCATTCAACCAGTATGCGATATGTGCAAAATTGGGTAACCCGTCATCGG
TTGTTTAGCCTATCATCATATCTCTTTCCTTGGAgttaattcttgatatg
cgtaagtcatttttctagcggaaacaccctaaaaaagcgGGATTTGAgcc
ctctctgttactaaaaatagaaacacggaggtcaaaaaccggctttttag
GGTGCTTCCGATAAAAACTATggcgtcatcttgacttacgcatatcaaaa
atacggagtttatgtatgtgtgtttttcagcgacggagacggcaaggttc
taatttgactagatcctatCCAGCTGAGGATGACGATATATCAGcatttt
taccgtcctcgatttatagggtcagaagtgcgggttattccaaatcgctt
cagtcactctaccgtcctcaaaagtgcaaatacaaaCTCATTAATATGAA
CAAAACCGTTGTAGGAAAATGTTCTTCGGGTCAATGAAATTAAGTTAACT
TCTTTcaattttacttcattttctattttcaatatACGAATATAGGCTAA
ACAACCGATGTCCGGTTATCTAATCGGTAAACTAGTATCTAAAACTACAG
TCGTCTAAATGACCGGTGATAGCCTAGGCAAAACGAAATTTtggataact
tttgatacagtCCAATTGCCACCTGGACAATTACCCCCTAAAAAATTCCC
AAACAATTACCTTCGAGACAATTCTTGATCGTTACATCGTATCTTTTGAC
TATTTTTCTTGCTATTCTTGAAGACTGCATTTAATTAAGAATGCTGTATG
AAAGTGTATAAAAGAATGCGGTTAATAGTATGATTTTTCGAAAAGCCACT
TTTTATTCAAACCTCTCCTTTACAGTCTGCACCATAGACCCACAGAAACA
AGCATGTGTGACCGAAAAACTATTTTTCGTAAATAAGAGCTAACTCAAAA
ATATGCAacgaattttcttataaaaaagtatttacCATAAAATTCacttg
acaaaaaaaaaccaGAAATTTTCTGTTTGGTCCGATGGAGCCAGTTTTTG
AGTTTAATTTCATAATAAAGTATTAGAATTTCATCCCCGAATCTTCAAAA
TATCTTCAAGAAAATCTAAGAAATTCCAAAGATAAGATTTTCATTAACAA
CATTATGGCTAAAATTGAGTTATTTATCACCATAAACTTTGCCATctctt
tgaatttgaaatgattATAGGGAGTTGAGAGGGGGATACAATAATAATGA
TATTGTCTAGGGAGTAATTGTCCCGAAGCAAATTGTCTGGGGGTAATTAT
CCTAGGGGCAATTGTCCTGGGGGTAATTGTCCTAGGAACAATTGTCCGGC
AGGCAACTACCCGGGGGCAATTGTTACAGGGGCGATTGTCCTGTCACCGC
TAAAAGTGAGCATTTTAGATAAAACAAGGACCTGTCTGTAAAATTCAACC
ATACACGTGACCAAACTGAAATTTCGCACACCGTCTTAGGTGGTCAGTAT
CTAccactggtgaaaatttcaaattaaaagctCGCAAGTAATTCCTGAGT
TCCGGTGGGTTGTCAACgttacagaccggtctgcaaAGTACCAAAGACCA
AGTTTTTTTCGATTacttgtattttttatttgattttcttctCTTTAGAA
TGTTTATCAAAACCGATCGGCCCGAGTCATACTGCAGTCACTAAAACCAA
TTGTGATGACAGAGTGGAACTTGGTGATGAATGCGCCTCCGAATGCGAGG
CCGTTCGTTATGGGGTCCAGTACCCAGCCAGTTACTTTTGTTCAAATGTG
GAGTGGTCTACTTACAAAATCCAATTTCAATTCCTTACTATCGTCTCCGG
TGTTCTTATGGAATCGGCATGCGATGATTGCAAATTAACAACCTTCAAAA
TTTTGTACAAACAGTCTATTAGCAGGAGTTGGATGAAATTGGCGTATCAT
GTAAGTAATTGCTATCTTCGATTTATGACTGAGATTTTATTACGCTTTGC
TAGAGTGTCTATATTCATGGcatcagccccccccccagaaatctgaagga
CACCTAGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAATTATC
TGCTGAataggggtacctaactcaaagcaatttttcaaggggacctaaat
tgctgggggcaccatgctcaatgggggcacctgaaaagtgggttGAAACC
AGTACAGAACTTGCAAGTGTAAAGGAAATATAACGTGTTCCATAGCTACG
ATCGAATTAATTCAAACGATTAAGACATTAATGGGGTGCGCTCCgcagat
gatgatgataattgaCGTTTCTCAAACTATATTGGTTCAGTTGAGACCAG
GGCGTCTGTGgaaactgaataaaaaattcGTATAATACTGTAactaaata
ttttcttctttttttacatAGGACTTTCATCAAACTGAACGAGTACAATA
TTTTGAATTGAATCATACACTGGCTATCAAAATCTCATTTCAAAGCCTGA
CACCAGATCCTTACAAAATTCATTTGGAGCTCTACGGGTGTGCTTCGTAC
AAAGGCTagtttcgttgtttttttttgNTTTGGAGCTCTACGGGTGTGCT
TCGTACAAAGGctagttttgttttgttttttcaattttccatagcCTCAG
CTTTGGTTCAGGTTGCAAGTAGGTACTTAGGTcttccaaaatttaagttt
caaatcaaaattaaaatagcTGTGCCACAAGCTAGCTTAACACCttaata
aacacccctgtctcacagccccgatgaaactttttcctacagcggggata
aagatttcgattgaaatctcaatggggataaaaattgttCCAAGNCGTAT
GATACTGTAactaaatattttcttcttttttttgcatagGACTTACATCA
AACTGAACGAGTACAATATTTTGAATTGAATCATACACTGGCTATCAAAA
TCTCATTTCAAAGCCTAACACCAGATCCTTACAAAATTCATTTGGAGCTC
TACGGGTGTGCTTCGTACAAAGGctagttttgttttgttttttcaatttt
ccatagcCTCAGCTTTGGTTCAGGTTGCAAGTAGGTACTTAGGTcttcca
aaatttaagtttcaaatcaaaattaaaatagcTGTGCCACAAGCTAGCTT
AACACCttaataaacacccctgtctcacagccccgatgaaactttttcct
acagCGGGGATAGGGGATAAAAATTGTTCCAAAGgtgaaaaatccagtgg
ggatggttttggagtgcaattcctaaacaataaatttcgaatgtggatat
gaaatcaaagtcaaattctcagtgggactgaaattctaGGGTTTTTCTCC
CCCGGGAACGAAAAtattgccaaattttccagtggggcttggGCCCCAGT
GGGtctttgacacaggggtgttaataAGGACAACCATAAAATTGTTATTA
TTCGGTCCCTATTCTCAATTACCCCTCCGGTGTATATAAGGTCCTTTCAA
GCTGCAATTATTAtttataacattttcaaatctcCAAATCatgtaaatct
attttaaatttgatttttgaatttgttcCAGGTGCCTACCCTCTTGGACT
TGAAAGTGGTGCAATAAACGATGAACAGATTTATCAAGATGATTTTGATG
GTGTAACATCAAGTTATAACCCACAAAATGTGCGTTTAAACTCACCTCGA
CAGAACGGTTGGAGACCATGGATTGACAGCATTGATAACGGTGTTGAGTA
TACCTTTGTATCGTTTAAACTCGATGACCTGGTAACTATAGATGCGTTAG
ATATCCAAGTTGGTAATCTGGACGAAGAGAACAATGCAAATACATTCCAT
ATCTCGTTTTATGATTACTGGAATGAAAATGCAGCAAAAGGACCATTACG
TTATACGACAATACCTGAAAGAACCTCAAATGGTCAAGGGACTCCCTTGG
TTAGTCTCCCCTCTctacatttttttctctttaacttaacctttgttcgt
tcgtccgtctctTTATCTGTTATCAGCTTTTCTAGGAAACAACCCATTAT
TTCTTTCTGGTTTTTGTATAGTGATGCCAAATGACAGTacccaaaaagtg
acggagtacggttttcgaaaaaaaatctttgggGGATCATCTGATCCAAA
TTCTGcctaaaaatgagtttttttttggattttgtgtgaaattacttcat
tagttttttctttctgagttttgcataaagataaagggcaaggttctctg
AAAAGTGGCCGAAGCCGTTTTATCCGGAAATTTTTTTGGTCGTAAAAATC
GGTAATTATAGTAATtataactttttcattgattgtaTTACTAAAGGATA
TCACTACCCCAGCATACAAAAAACCGTTCGAGACTTGGCGTTATGTTTTC
CCATATCCTATCTACACCAAACATCTCTATTATACCGTCCTCAACCATCA
GACACCTTTGTTCCACAAGATAGAGTTTATTGGGAAGAGAGGCTTCCACG
GTGAGTGTCTTTATGAaactgttcatctaacgtttacAGACCAtataaaa
agaacgacaaatagctattaaaaagcgacaaaaagaacgactaaccctaa
ccctaacgcTAACTATCATACCTCAacctcccgggggggggggcagtggg
tttaccaactgacatGATATATGCACcgaaaaattggcttttagaaNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNtttcgagcaaaaatttgcaattt
tcccagatttgctgaaatttccacccttacagtgcatttatcaaaagtcc
ccccttacagtgcacttctgatattttgaaaaacatacccttaaccgccg
cacatacccgtcggtcaatttgcctgactgcccccccccctcccgggCTC
AACCTTGGTCAGTGACTACCACCCCTAGGTACTTTACGTTATTTAACAAC
TACCGgtttaaagaacgataaattacgcatgcgtataagtctctatttgg
gtgagctggaaacattagatgaactaactcTTATTACTCTTATAAttatc
ttataaaatttgtcgGAAATCTAATCAACTTTTAGATGGCTCCTAGGCTT
AGTTGAGTGTTAGATGTGACGTCATAGCCTTTCTATCATATGGGAGGTAt
gttgaaacaataaaaaaagtccAGGAACAACTTCAAATTAGCCCATAATC
ATTTAGCtgataatgaaaaaaaataattaatttttgagcaaaatattgga
aatactaaattatcttttttcacccgaaacaaatttttcatgttttatag
aatattttccaaaaaaccttCTTGTTAAAGCTCCCAGAAATGAATTATTA
TTTGATGTATGCTAAATAATCGATAATGAGCAAAATAGCCAATAATTATA
ACTTTCCAATTGTCCCTATTTTTTCTGAATTGGTATATTATTGGTCAAAC
GCACGCTCGAGCATGCGTAGTTAGAAAAAGTTTATCATTTCCCATTCTGG
AGCTAATCAAGGGATAAAATTTGCAATATACATTAATTGAATCATTAAAC
CAATCTGAAGAGTTATAAAAGGCGACTATCAATACTTTGctcaaaaatca
agttttttttcatattcGGCATTATTGTCTATATAATGTGGGCTAATTTG
CTTACTCTGGGCTAAATAGACGATTTTCCGAGATGATGGGCTAATTTGAA
GTCGTTATACTAACTGATGAAAATATAACAGCGGCCACTTAAAACATTTA
CCAAACTCATCTACCGAAATGTTCGATGTGTACTGGCTAACATTGacttt
gtctgtacacaaacccagcATCTAtggcttatttcaaaattcattgccgt
agatgGTCTGTTGTCATTNTTGAATCACTAAACAATCTGAAGAGTTATAA
AAGGCGACTATCAATACTTTGCTCAAAAATCAAGCTTTTTTTCATATTCG
tagtcttttctcatttgatgTTAGTGAGAGAagggagacgatgagagaag
tgttgctatttataaatcatacttcatcgcagaggtctccgtacgggaat
ctttttatcaaacagacaatgcacaCTGAGTGTAcgacgaagcgataaac
gtgagatacactctggtatagATTAACATTGACTATATGCTCCTACTTTT
TCAGCCGAACACTCATGGAAGATGGACCGTAATGACGTTTTTAAGGATAT
GGCTCGTAACCATCATTTTTATCCCACTCCTAAATACCGCCACTTANGAT
GGACCGTAATGACGTTTTTAAGGATATGGCTCGGAACCATCATTTTTATC
CCACTCCTAAATACCACCACTTGGCTCCCGAGGGACCAATACAAGGATTT
GCTGAGAGCAAATTATCAGATAATAATAGAGATGACCAGCCACTTCAATC
TTTACCTTTCGAAAATGATGACTGTTTGGTGAATGCTGATTATTGTAAGC
ATGGTACAACTTTTCTCATGGCTGCTAGACGTAAGTCGAGTTTTCTGTTA
ACcttaaaaaatatatgaatGATATAATGAGCTAATTCATAATCGATTTT
CAAGTCATCTGGGAACCGAACGCAGACCTCCCGCTCGGAAGGCAAGGACG
ATCACCACTATTATACACATTCTACCAATTCTTTTGCTAAGTAAGATTCC
AGCGCTCAAAATAGCCGATTGCATACGATAGCCTTTGAcataataagcat
aaattagGTATCATATTGGGGTTGTGAGAGTAAATTTTTCAGAGAACGAG
ATAATATACCAAGCAACCCCaggcctgacccgaaaattggagttaCTTAT
AAAAAGTGTGTAAGCCTCTTTTAATACACCGAAGAAAGAAATATCACTTT
TTAGTGAATAAATTTTCATGTACTGTCACATGACACTGTCTATAAAATTC
TAActaaaatttttcctttttaatctttttatttaGTTGAGCGCGAGGGT
CTATACTCTCGTAGCCTACTTATCAATGCTGATCTCAAAACAAGCTACGT
GCCAATTCCTGCAAGCTGTCAGCAGTTTAGTCTCAACAAACGTACTGCTT
TTTACTTTCGCAATGTAAAGATACCGAAACACGCCAAAATACATACCGCT
AATTCTGGTCTCTATTATGATAACTTGCAAGTTACTCAGCGCTCTTCTAA
TGGTTATTTGTTCTTTAACGTGCGTATTTACATCGGGCTTGATGAAAACT
TCgtcaaaagttgtcattatcGTTGGGATGTTGAAACGCATTTTTTACTA
AGTGAGAATTTCCAATCGAGGAAATTGGATACCAAATATTTTCGTCTTTT
TCTTGGGAAAGAACTTCAAAAAGTGTTCAACTCACCTTCGTGGAGATATG
GCATGTCTATCATCATATACATTGAACCTATGCAAGATCTTCCCGCTTAT
GAAGTAATGGTAGAAAGTCCCTGGTCTCTAAAGATATGGTATCAACAagg
tatttttgagaaaaagatgtTCGGTGTGCGAGAATCTTTTCTTCAAATAC
GGCAACAACGGCTGTTGAAAGTCTgtttcaatataatctgcaggagacaa
aaaaaacttttgattgaactcgaatgaaatagttttttttttgcgtttgt
TGAAAATATAATAAGGAGTGGGATattataaaaatctttaaatgaagatg
aaaaatgaagatgaagaaaaaatcaacttcttgtaggaTTGTCCTACGAT
CGTCATTTTCATATCAAGAGTGTAtcactttgaaaaaacaatttattcag
tcaaaaaatacaacttaaaaCTAAGAAATGGGCtcctttttgttgttttt
tttgatgatttttagaaCTGCTTGGTGATATACTTTGGGCTATACAGTAT
CTTTTGAactaatattttttcatgaaaagttttttaactGAGAGATGATA
ATATTCTAAGATTACTGTTGTGAAAATGGAAATTACAGCACAGTTTATAT
TCACAAAgttgatctttttctttttaatttttcatcttcattttgcaatt
tttttatttttttttacttaataTAATATCCCActcttgaatatcttttc
aacaatcaCAAAATTGCAATCTAATTcaaattatatcaaaagttacatcc
tttttttctccattgcagattatattgagactgACATTAGGGGCGATTTC
ACCCACGATCAACTTTAAATTGACGTTTAGTCCAAGACCCCCCCCCTCTT
CTACCCCTTAGCGTCAAATATTTACAAATTAaccaaaaattgataatttt
ctttcactttttaagaatttttagtCAATAGACTAGCCCATAaccttttt
tttctaattttggagATCCATTAACACAGCCCAGGGGATGGGAAGGATGT
GCGGAACCGTATGTGCAGCCAATAATTAGGGTCTCAATAAGATTTTTACA
TTGGAGAGAAAACTTGATCAAAGTCGAGCAAGAAAGCAACCATcgtcttt
ttgaattttttttttgattaaagAGCAAAAATAATTGGATATACTAAAAA
GACCACAACAATGAAACCAGTTTTTCATCCGTTTTTTTGGCTCAGTGACG
AATTCCTTTTCGTTAAAATGGAAGCAATTTAAACTAATTTTAGATACCCA
TTAGTTTTATTATTATCAACTTTTATTCTATTTCTCGTAGTTTGTGATGA
TTTTAAGGAGGATTTGGTGAACAATCTACCATTGTCGTCATTCAGTTACA
CAGGATCACCTGCTAATTGTGATGATNTTCTATTTCTCGTAGTTTGTGAC
GATTTTAAGGAGGATTTGGTGAACAATCTACCATTGTCGTCATTCAGTTA
CACAGGATCACCTGCTAATTGTGATGATCCAAGTTACATCAAATtcaatg
atgaagaaaatcattGGACTCCGTGTGACGGATCTCATTTAGTCTTACAG
CTTTCTGGTACACCACACGTGACTATGATAGCTATCAAAGGCCGACAAAG
TGGATTTGTtaagaaatttgaattgtttcaCAGCTTGGATGGTTCTCAGT
ATCATAAGATCAAATTTTCTTCTAAAAATGTAAGTTTTTTgttactacct
tatcggggaaaattttgaacttcgtcggggaaaagtgacgaaatttcggc
caagtgacgaatatttttccccgacgaaaattttccccgacgaagttttc
cccgataaggtataaaaATTAACTAATTCACTGCAAAAGTAATTCAATTC
ATCATTTACCACTCTCAAGATAGAATTCTTTGTGGGAGTATCTTCAAACT
GTCTTTCCGAAACCGTTCATTATTTTTCGAATTTCGTTAATATATAATTA
TTTCTTAATTGTATACGACATTTACAAGAGTTAGTATATATTTCACACAG
TACAGTATCATGTAAGACAGCCGGCTGTACTATATCGAAAGGAAGATGGG
ACCGATTTCAGGCCCGGCTGAAGTGGGGAGACTGGGAAGACTTCAGCCTC
ccaacttttgagcaaatgagttttttttctcgaaCTCATAGTGAATTTTA
acacatttttagttttcagtTTCCCCACTTTTACGAACGAATGTTCCGTA
CCATCTTAAATTTGTGCTCTGTTCAGGAAGCAATTGAAAAATGGAGTTAA
GAGGCGATAAATTTCCAAACAACTCGTTGGGTGTTCATCATTTACCCTTC
TTTACAAGATGAATCAGCTATTCATCGTCCACGAACATTTTTAAAGTGCT
CAAAGCTATTTTCCTCTGATCGGTACATAACAAACTCGATTTCATTTTCC
ATCTACcagttttagaaaaatttagttatttttcatttcgatatAGTTAT
GCCGACTGTAAGAGCCATGCAGGGTTgtcctctttttcttttttgaattt
tattctttCCGTTTTAgtactttgaaaaattttcgagTCAATTGGAATAT
CTTTCTTTTCCACATCCGATCCGTATGAAATGGATCAAGATCAATGTTCT
TGAAGTCATTGGTGATTCTCCGTCCATGAAACTCGATCTTATTGAATGTC
AAGCAACTCGAAGtatgtatgatttttttttttctcaatcaatTGAATTG
tggatttttggaaatttaaacaatttttccaaTAATTCACCCATTTTGTG
TGTGCGTGTGTTGAAAAACAGgattaatgtttaaaaatcgtcTTTGGTAG
GTTCATCAccataaattaaaattgatccGACTGATTAATACTCAATTTGA
TTAAATGCCATTTATTTCTCTTGTAGATTTTTTCGATGACCACTCTAAGA
AAAATTACCCGAATCTCATGAAGTATAGGCGCAGTATATCGATGGATGTC
GGTGGAGGGAATTATCAAGGTTTTCTTTATTCGGATAAAAAAGCTGTATT
TCATAAAAACGGTGAAGTAGTAAGTCATACTTTGCATCCAGTATTGGACA
TTAATACGATTGATACTCGATCACCAAAGATGTATTATTTAAAGGATGGC
GTAGGTGGTGAGGTTTGGAAACTTTGGCATGACGACTCACGCCTTACAAG
TAACACAAACCTATTTCTTGTGACAGTTACCACCCTTTACAAATTCGATG
AAAACTACAGAGCTATTGCATGGCCCCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032053XLOC_032053Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050601-exon-scaffold_18-1491911889:162970..163055TCONS_00050601-exon-scaffold_18-1491911889:162970..163055Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1510915933:162970..163055TCONS_00050601-exon-scaffold_18-1510915933:162970..163055Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1575043694:162970..163055TCONS_00050601-exon-scaffold_18-1575043694:162970..163055Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1491911889:164718..165019TCONS_00050601-exon-scaffold_18-1491911889:164718..165019Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1510915933:164718..165019TCONS_00050601-exon-scaffold_18-1510915933:164718..165019Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1575043694:164718..165019TCONS_00050601-exon-scaffold_18-1575043694:164718..165019Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1491911889:166709..166841TCONS_00050601-exon-scaffold_18-1491911889:166709..166841Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1510915933:166709..166841TCONS_00050601-exon-scaffold_18-1510915933:166709..166841Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1575043694:166709..166841TCONS_00050601-exon-scaffold_18-1575043694:166709..166841Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1491911889:167401..167768TCONS_00050601-exon-scaffold_18-1491911889:167401..167768Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1510915933:167401..167768TCONS_00050601-exon-scaffold_18-1510915933:167401..167768Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1575043694:167401..167768TCONS_00050601-exon-scaffold_18-1575043694:167401..167768Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1491911889:168166..168319TCONS_00050601-exon-scaffold_18-1491911889:168166..168319Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1510915933:168166..168319TCONS_00050601-exon-scaffold_18-1510915933:168166..168319Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1575043694:168166..168319TCONS_00050601-exon-scaffold_18-1575043694:168166..168319Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1491911889:170424..170749TCONS_00050601-exon-scaffold_18-1491911889:170424..170749Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1510915933:170424..170749TCONS_00050601-exon-scaffold_18-1510915933:170424..170749Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1575043694:170424..170749TCONS_00050601-exon-scaffold_18-1575043694:170424..170749Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1491911889:171206..171718TCONS_00050601-exon-scaffold_18-1491911889:171206..171718Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1510915933:171206..171718TCONS_00050601-exon-scaffold_18-1510915933:171206..171718Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1575043694:171206..171718TCONS_00050601-exon-scaffold_18-1575043694:171206..171718Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1491911889:173012..173298TCONS_00050601-exon-scaffold_18-1491911889:173012..173298Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1510915933:173012..173298TCONS_00050601-exon-scaffold_18-1510915933:173012..173298Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1575043694:173012..173298TCONS_00050601-exon-scaffold_18-1575043694:173012..173298Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1491911889:174137..174281TCONS_00050601-exon-scaffold_18-1491911889:174137..174281Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1510915933:174137..174281TCONS_00050601-exon-scaffold_18-1510915933:174137..174281Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1575043694:174137..174281TCONS_00050601-exon-scaffold_18-1575043694:174137..174281Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1491911889:174496..174848TCONS_00050601-exon-scaffold_18-1491911889:174496..174848Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1510915933:174496..174848TCONS_00050601-exon-scaffold_18-1510915933:174496..174848Clytia hemisphaericaexon
TCONS_00050601-exon-scaffold_18-1575043694:174496..174848TCONS_00050601-exon-scaffold_18-1575043694:174496..174848Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:162970..174848 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.0983864	0	0.497298	0	0	0	0	0.145934	0.0620577	0	0	0	2.33375e-09	0	0	0	0	0	0	0.292419	0.501167	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050601 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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