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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050550 ID=TCONS_00050550|Name=TCONS_00050550|organism=Clytia hemisphaerica|type=transcript|length=1255bp
AATATTGAAGAAACACGCACTGGCGATGACTGCGAAAAAATCGACCTCGA
AGAAATAGCTAAACGATTCCAACAAGCTATCTTATTGGTTGGCCAAGCAA
TAAATGCTACCAACTTCTTCAGACGTAAGAATGCGTTGACTGCCCTAGGT
ATCAAAGAAAGTGAAGTAAGCAGCTGGTTACGAGAAACATTAGTTGATGA
CCTAGAAAACAGTGATGGTAAACTATTTGGAgagaaaatgtggaaaactc
tAACAAAACAATCCAAAGCAGCAGGCTACACTTATCTTAAACAATACCTA
TTTTCCAGACGACTGCAGGACCAAAAAAGGAAACCCTTTTCATGGGGCTC
TTCCCAGACGAGCCGTGGAGAAGAGCGTCAACACCCCCCCTGCTGAAGGA
CATGGCTCAAACAACAGACATCCATCCAACAAGAAATGGAGAGGTAAGAG
AAAATCTACCAAACCTGACAGCCCCCCTTTCCAGTCAAGCAAATGCTCAA
TTAGAGTTTCAAACACACTACCCTGGGAAAATACACCCAGGGATAGAAAA
TCTCCTAGAAGAGATAATAGTACCCCAGTCAACATTGATTGCTGGCAAAA
CAAAATTATTTCAAAAGAATTGGGCCAAAATAACCCAAGACCCATGCATC
CTGGAGACCATCTCAGGCTTGTCAATCCCAGTAATGGGAAAACCAATTCA
AAAGACACCACCAAGGCAAATAAATTTCGACTCAAACATGAAAGCTCTAA
TACGGGCAGAGATAAGAACTTTACTGGAAAAAGGGGCTGTAAAGAGAGTT
CTTTACAAGCAAGGCCAGGTCCTGTCCACTCTGTTTTTGAAAGAGAAAAA
AGAACCAGGGAAATTCAGACCTGTGATAAACTTGAGGGAACTCAACTCTC
ATATCCCATACCAAAAATTCAAGATGGAGACCCTAAGGGATGTAAAGAAC
ATTCTTCAGAAGGGGGACTTCATGGTCAAAGTGGATCTGAAAGATGCATA
TTTTTCTATCCCAATACACCCACAGTCGATGAAGTATGTGAGATTCAGCT
GGGAGGGAAACCTATACAAGTTTCAATGCCTAATGTTTGGACTAGGGCCA
GCTCCCAAAATATTCACGAAACTTCTCAAGGTGCCCATTTCTCTATTGAG
AAGATTACAGATAAAACTGATAATCTACATAGACGACATCCTGATTGTAG
CAAGGTCAAAGGAGGAGGCCATCTTCTCCAGAGACACAGCGATCTTCTTA
TTGGA Run BLAST on NCBI transcript from alignment at scaffold_179:392042..393296- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050550 ID=TCONS_00050550|Name=TCONS_00050550|organism=Clytia hemisphaerica|type=transcript|length=1255bp|location=Sequence derived from alignment at scaffold_179:392042..393296- (Clytia hemisphaerica)
AATATTGAAGAAACACGCACTGGCGATGACTGCGAAAAAATCGACCTCGA
AGAAATAGCTAAACGATTCCAACAAGCTATCTTATTGGTTGGCCAAGCAA
TAAATGCTACCAACTTCTTCAGACGTAAGAATGCGTTGACTGCCCTAGGT
ATCAAAGAAAGTGAAGTAAGCAGCTGGTTACGAGAAACATTAGTTGATGA
CCTAGAAAACAGTGATGGTAAACTATTTGGAGAGAAAATGTGGAAAACTC
TAACAAAACAATCCAAAGCAGCAGGCTACACTTATCTTAAACAATACCTA
TTTTCCAGACGACTGCAGGACCAAAAAAGGAAACCCTTTTCATGGGGCTC
TTCCCAGACGAGCCGTGGAGAAGAGCGTCAACACCCCCCCTGCTGAAGGA
CATGGCTCAAACAACAGACATCCATCCAACAAGAAATGGAGAGGTAAGAG
AAAATCTACCAAACCTGACAGCCCCCCTTTCCAGTCAAGCAAATGCTCAA
TTAGAGTTTCAAACACACTACCCTGGGAAAATACACCCAGGGATAGAAAA
TCTCCTAGAAGAGATAATAGTACCCCAGTCAACATTGATTGCTGGCAAAA
CAAAATTATTTCAAAAGAATTGGGCCAAAATAACCCAAGACCCATGCATC
CTGGAGACCATCTCAGGCTTGTCAATCCCAGTAATGGGAAAACCAATTCA
AAAGACACCACCAAGGCAAATAAATTTCGACTCAAACATGAAAGCTCTAA
TACGGGCAGAGATAAGAACTTTACTGGAAAAAGGGGCTGTAAAGAGAGTT
CTTTACAAGCAAGGCCAGGTCCTGTCCACTCTGTTTTTGAAAGAGAAAAA
AGAACCAGGGAAATTCAGACCTGTGATAAACTTGAGGGAACTCAACTCTC
ATATCCCATACCAAAAATTCAAGATGGAGACCCTAAGGGATGTAAAGAAC
ATTCTTCAGAAGGGGGACTTCATGGTCAAAGTGGATCTGAAAGATGCATA
TTTTTCTATCCCAATACACCCACAGTCGATGAAGTATGTGAGATTCAGCT
GGGAGGGAAACCTATACAAGTTTCAATGCCTAATGTTTGGACTAGGGCCA
GCTCCCAAAATATTCACGAAACTTCTCAAGGTGCCCATTTCTCTATTGAG
AAGATTACAGATAAAACTGATAATCTACATAGACGACATCCTGATTGTAG
CAAGGTCAAAGGAGGAGGCCATCTTCTCCAGAGACACAGCGATCTTCTTA
TTGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050550-exon-scaffold_179-1575043694:392042..393296 | TCONS_00050550-exon-scaffold_179-1575043694:392042..393296 | Clytia hemisphaerica | exon |
| TCONS_00050550-exon-scaffold_179-1510915933:392042..393296 | TCONS_00050550-exon-scaffold_179-1510915933:392042..393296 | Clytia hemisphaerica | exon |
| TCONS_00050550-exon-scaffold_179-1491911889:392042..393296 | TCONS_00050550-exon-scaffold_179-1491911889:392042..393296 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_179 | supercontig | scaffold_179:392042..393296 - |
Blast
The following BLAST results are available for this feature:
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