TCONS_00050534 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050534
Unique NameTCONS_00050534
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1516

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050534 ID=TCONS_00050534|Name=TCONS_00050534|organism=Clytia hemisphaerica|type=transcript|length=1516bp
TGACAACCTGAAGGAGCTGGAAAGGCAATTAAAAGGAAAAGATCACGAAC
CTTCTTCTGCTGATCTCGCCTCTCGTATGCTAACTGTCATGGCCAGAGGA
GTCCTCGCACACTTTAACTACCCAATTGGATATTTTTCTACCAAAACAGC
AAATGCAGACCATTTGTTTAACATTATTTGGGAAGGTGTTAAAGTAATGG
AAGCAACTGGAATGAAGGTGGTTGCCTTTGTTTCAGATGGGGCATctcaa
aatagaagattttaCAACATGCATCGATTGGCTGATTCGTCAAACGTTTC
ACCAGAGGGTGTTGTGTACTGGGCAATCAACAAGTTTGATCCttctagaa
aaatatatttcttcaGTGATCCGCCGCATCTTATGAAAACCATCAGAAAC
AACGTTGAAAAGTCAAGCGCAAATGGTACAAGAAATTTAATGGTCAATGG
CAAGGTAATATGTTGGTCACACATCAGAAACGTTTATGAAGCTGATGTCA
ACATCAATGCTGCTGTTCCGGGTTTGAGGAAACTGAACCGTGTCACATTT
GACCACATTCATCTAACCCCAAGATTGAGGATGCGTGTTAATCTAGCAGT
TCAGGTCCTTAGCAAATCGATGGCAGATGCTTTAAAGGCTcaagattttg
cacacacaAAAGAAACCGAACATTTCATTCGGTTATGTGATGATTTCTTT
GATATGCTGAATGTTTCAAAAACATACGAAGACCAAAAGTCGAACAAAAA
AGCCTTATATCCGTACAAAAGGCAAACTGGTGATTCAGGAGATCAAAGCG
GAGATGTAAGTGGAGATGGAAGGGAAGATGAAAGCAAAGATGAAAGCAAA
GATGGAAGCGGAGATCAAAGCGAAGATGGAAGCGAAGATGAAAGTGGAGA
TGAAAGCAAAGATGAAAGCAGAGAGGTGACCGAAGGTAAAGGTGGTGATG
GAAGCGGAGACAACGAGAATGCtggtcaaaacaaagatggagAAGATTGG
CGTTTTGATtggCTGGAGAACACCTTCTTGAAATATATTAACGATTGGCA
AGAAGCAGTGGGTAAATTGAAACTTCCGAAGGAGATCAGAGCAAAACGAT
CTCTCAGTTATCAAACGATTGAAGGAATAAGGATGACAGtGAGATCATTT
CTGGGACTTATTCCAGAGCTGCTATCGATTCCAGGTGTTAAGTACATCCT
TTCTGATCGTTTCAACCAAGATCCGTTAGAGGAACATTTCGGTAAGCATC
GGATGCGATGTGGAGCAAACGATAATCCTGCCGAGGAGCAATATATGTAC
AACGAGCGTAAGATTTTAGTGTCAAAATCAGAAATGATGATCAAGGGAGG
GAATTGTCGAAAACGCAAaagaaataagcaaaaaatcgATACATCAGATT
GTAGATCCCTTATCAAACGagcaaagaagagaaaaaagaCAGTGAAATGA
TTAAATATAGACTTACCGACTTTATGCTACTTTTGAACGTGTATATATTG
ATTTTATGATGGGCAG
Run BLAST on NCBI

protein sequence of TCONS_00050534-protein

>TCONS_00050534-protein ID=TCONS_00050534-protein|Name=TCONS_00050534-protein|organism=Clytia hemisphaerica|type=polypeptide|length=482bp
DNLKELERQLKGKDHEPSSADLASRMLTVMARGVLAHFNYPIGYFSTKTA
NADHLFNIIWEGVKVMEATGMKVVAFVSDGASQNRRFYNMHRLADSSNVS
PEGVVYWAINKFDPSRKIYFFSDPPHLMKTIRNNVEKSSANGTRNLMVNG
KVICWSHIRNVYEADVNINAAVPGLRKLNRVTFDHIHLTPRLRMRVNLAV
QVLSKSMADALKAQDFAHTKETEHFIRLCDDFFDMLNVSKTYEDQKSNKK
ALYPYKRQTGDSGDQSGDVSGDGREDESKDESKDGSGDQSEDGSEDESGD
ESKDESREVTEGKGGDGSGDNENAGQNKDGEDWRFDWLENTFLKYINDWQ
EAVGKLKLPKEIRAKRSLSYQTIEGIRMTVRSFLGLIPELLSIPGVKYIL
SDRFNQDPLEEHFGKHRMRCGANDNPAEEQYMYNERKILVSKSEMMIKGG
NCRKRKRNKQKIDTSDCRSLIKRAKKRKKTVK
Run BLAST on NCBI

transcript from alignment at scaffold_179:18245..20878-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050534 ID=TCONS_00050534|Name=TCONS_00050534|organism=Clytia hemisphaerica|type=transcript|length=2634bp|location=Sequence derived from alignment at scaffold_179:18245..20878- (Clytia hemisphaerica)
TGACAACCTGAAGGAGCTGGAAAGGCAATTAAAAGGAAAAGATCACGAAC
CTTCTTCTGCTGATCTCGCCTCTCGTATGCTAACTGTCATGGCCAGAGGA
GTCCTCGCACACTTTAACTACCCAATTGGATATTTTTCTACCAAAACAGC
AAATGCAGACCATTTGTTTAACATTATTTGGGAAGGTGTTAAAGTAATGG
AAGCAACTGGAATGAAGGTGGTTGCCTTTGTTTCAGATGGGGCATCTCAA
AATAGAAGATTTTACAACATGCATCGATTGGCTGATTCGTCAAACGTTTC
ACCAGAGGGTGTTGTGTACTGGGCAATCAACAAGTTTGATCCTTCTAGAA
AAATATATTTCTTCAGTGATCCGCCGCATCTTATGAAAACCATCAGAAAC
AACGTTGAAAAGTCAAGCGCAAATGGTACAAGAAATTTAATGGTAAGATT
GTCTATAGTGTACCTTAAGTCTTAAGTTATGGGAAATAATTTTTTTGCTA
GAAATAATTTAGGCAGATTAGAACCCGCAAATTATAATTTTGGCCATTTT
GATTAAAATTAACTAATTTTGCTATATTCATATTATTTTTCATGATTGAG
ATTGTTTATATCACATTTTGTTGAAATTCAACATGCTTTTAATAAATGAT
TTTATTTTTTTCTGAGATTGTTTATGACTAGTTTGTATTTTTAAATTCAT
AATCTGACATTTCAAAGGTCAATGGCAAGGTAATATGTTGGTCACACATC
AGAAACGTTTATGAAGCTGATGTCAACATCAATGCTGCTGTTCCGGGTTT
GAGGAAACTGAACCGTGTCACATTTGACCACATTCATCTAACCCCAAGAT
TGAGGATGCGTGTTAATCTAGCAGTTCAGGTTAGTTTGAGCTCCTTTTGG
GCCACCCATCAGTGTAGGGTGTTGGGCAGTTTGGCCAAAATGTGTGTCTA
TTGTTTAAATGACAACAATTTTATAGTTCTCTGTCTACAATAAGGATAAT
ATATTTGAAAGACCCCTATGAAAAACTAATGATTGCAAATATTTCTTTTA
ATGAGGCACTATATTTAAATACTAAGTTTTGATTTGTAAATAGACGGCTC
AATGGATAAATTTAAATTTGATTAAAGTTGAACTAACAATTATGTTTTAA
CAATATAAAATTCACTTTAGGTCCTTAGCAAATCGATGGCAGATGCTTTA
AAGGCTCAAGATTTTGCACACACAAAAGAAACCGAACATTTCATTCGGTT
ATGTGATGATTTCTTTGATATGCTGAATGTTTCAAAAACATACGAAGACC
AAAAGTCGAACAAAAAAGCCTTATATCCGTACAAAAGGCAAACTGGTGAT
TCAGGAGATCAAAGCGGAGATGTAAGTGGAGATGGAAGGGAAGATGAAAG
CAAAGATGAAAGCAAAGATGGAAGCGGAGATCAAAGCGAAGATGGAAGCG
AAGATGAAAGCGAAGATGAAAGCGGAGATGAAAGCGGAGATGAAAGCGGA
GATGAAAGCGAAGATGGAAGCAAAGATGAAGGTGGAGATGAAAGCAAAGA
TGAAAGCAGAGAGGTGACCGAAGGTAAAGGTGGTGATGGAAGCGGAGACA
ACGAGAATGCTGGTCAAAACAAAGATGGAGAAGATTGGCGTTTTGATGTG
AGTTGTTAGTTAATACACTTAAGGAAAATAATCTATGTAGGAACTAGATT
TTGCATATTTGGCCCAAGACCCAAAAATTCAGTTCCCTTTAAAAAATTTT
CCAAATGCAAAAAAATGACTTTATAACAAAGGCCATGATGTTTTAAAAAT
AGTAAAAAATCTGCACGATTTTATTTCGCAAACGTTCATGACACCGTAAA
AATTACCCCTCAAAAAATGGTTTCCCTATGCTGAATGTTGGCTGAATTCT
AACATGCTTAAGCATTTTTTTGACAATTGAGGCAGTGCATAGTAAACTTG
TGTTAATGGTTTTATTTAAAAAATGTCTGTTGTTTTTATTTTCAGTGGCT
GGAGAACACCTTCTTGAAATATATTAACGATTGGCAAGAAGCAGTGGGTA
AATTGAAACTTCCGAAGGAGATCAGAGCAAAACGATCTCTCAGTTATCAA
ACGATTGAAGGAATAAGGATGACAGGTATAATACTATTGAAATTATTGCT
ATTATTGTTATGAATTATTCCTATCTGGAATTTGTTTTTTTATTTGGAAA
AGAGATTTGCTCGCAATGACAGTATTTGCTCATTATTTTCTTTCTTCTTT
TATTCAGTGAGATCATTTCTGGGACTTATTCCAGAGCTGCTATCGATTCC
AGGTGTTAAGTACATCCTTTCTGATCGTTTCAACCAAGATCCGTTAGAGG
AACATTTCGGTAAGCATCGGATGCGATGTGGAGCAAACGATAATCCTGCC
GAGGAGCAATATATGTACAACGAGCGTAAGATTTTAGTGTCAAAATCAGA
AATGATGATCAAGGGAGGGAATTGTCGAAAACGCAAAAGAAATAAGCAAA
AAATCGATACATCAGATTGTAGATCCCTTATCAAACGAGCAAAGAAGAGA
AAAAAGACAGTGAAATGATTAAATATAGACTTACCGACTTTATGCTACTT
TTGAACGTGTATATATTGATTTTATGATGGGCAG

Coding sequence (CDS) from alignment at scaffold_179:18245..20878-

>TCONS_00050534 ID=TCONS_00050534|Name=TCONS_00050534|organism=Clytia hemisphaerica|type=CDS|length=8694bp|location=Sequence derived from alignment at scaffold_179:18245..20878- (Clytia hemisphaerica)
TGAGATCATTTCTGGGACTTATTCCAGAGCTGCTATCGATTCCAGGTGTT
AAGTACATCCTTTCTGATCGTTTCAACCAAGATCCGTTAGAGGAACATTT
CGGTAAGCATCGGATGCGATGTGGAGCAAACGATAATCCTGCCGAGGAGC
AATATATGTACAACGAGCGTAAGATTTTAGTGTCAAAATCAGAAATGATG
ATCAAGGGAGGGAATTGTCGAAAACGCAAAAGAAATAAGCAAAAAATCGA
TACATCAGATTGTAGATCCCTTATCAAACGAGCAAAGAAGAGAAAAAAGA
CAGTGAAATGATGGCTGGAGAACACCTTCTTGAAATATATTAACGATTGG
CAAGAAGCAGTGGGTAAATTGAAACTTCCGAAGGAGATCAGAGCAAAACG
ATCTCTCAGTTATCAAACGATTGAAGGAATAAGGATGACAGGTGGAGATG
AAAGCAAAGATGAAAGCAGAGAGGTGACCGAAGGTAAAGGTGGTGATGGA
AGCGGAGACAACGAGAATGCTGGTCAAAACAAAGATGGAGAAGATTGGCG
TTTTGATGTCCTTAGCAAATCGATGGCAGATGCTTTAAAGGCTCAAGATT
TTGCACACACAAAAGAAACCGAACATTTCATTCGGTTATGTGATGATTTC
TTTGATATGCTGAATGTTTCAAAAACATACGAAGACCAAAAGTCGAACAA
AAAAGCCTTATATCCGTACAAAAGGCAAACTGGTGATTCAGGAGATCAAA
GCGGAGATGTAAGTGGAGATGGAAGGGAAGATGAAAGCAAAGATGAAAGC
AAAGATGGAAGCGGAGATCAAAGCGAAGATGGAAGCGAAGATGAAAGTCA
ATGGCAAGGTAATATGTTGGTCACACATCAGAAACGTTTATGAAGCTGAT
GTCAACATCAATGCTGCTGTTCCGGGTTTGAGGAAACTGAACCGTGTCAC
ATTTGACCACATTCATCTAACCCCAAGATTGAGGATGCGTGTTAATCTAG
CAGTTCAGGACAACCTGAAGGAGCTGGAAAGGCAATTAAAAGGAAAAGAT
CACGAACCTTCTTCTGCTGATCTCGCCTCTCGTATGCTAACTGTCATGGC
CAGAGGAGTCCTCGCACACTTTAACTACCCAATTGGATATTTTTCTACCA
AAACAGCAAATGCAGACCATTTGTTTAACATTATTTGGGAAGGTGTTAAA
GTAATGGAAGCAACTGGAATGAAGGTGGTTGCCTTTGTTTCAGATGGGGC
ATCTCAAAATAGAAGATTTTACAACATGCATCGATTGGCTGATTCGTCAA
ACGTTTCACCAGAGGGTGTTGTGTACTGGGCAATCAACAAGTTTGATCCT
TCTAGAAAAATATATTTCTTCAGTGATCCGCCGCATCTTATGAAAACCAT
CAGAAACAACGTTGAAAAGTCAAGCGCAAATGGTACAAGAAATTTAATGT
GAGATCATTTCTGGGACTTATTCCAGAGCTGCTATCGATTCCAGGTGTTA
AGTACATCCTTTCTGATCGTTTCAACCAAGATCCGTTAGAGGAACATTTC
GGTAAGCATCGGATGCGATGTGGAGCAAACGATAATCCTGCCGAGGAGCA
ATATATGTACAACGAGCGTAAGATTTTAGTGTCAAAATCAGAAATGATGA
TCAAGGGAGGGAATTGTCGAAAACGCAAAAGAAATAAGCAAAAAATCGAT
ACATCAGATTGTAGATCCCTTATCAAACGAGCAAAGAAGAGAAAAAAGAC
AGTGAAATGATGGCTGGAGAACACCTTCTTGAAATATATTAACGATTGGC
AAGAAGCAGTGGGTAAATTGAAACTTCCGAAGGAGATCAGAGCAAAACGA
TCTCTCAGTTATCAAACGATTGAAGGAATAAGGATGACAGGTGGAGATGA
AAGCAAAGATGAAAGCAGAGAGGTGACCGAAGGTAAAGGTGGTGATGGAA
GCGGAGACAACGAGAATGCTGGTCAAAACAAAGATGGAGAAGATTGGCGT
TTTGATGTCCTTAGCAAATCGATGGCAGATGCTTTAAAGGCTCAAGATTT
TGCACACACAAAAGAAACCGAACATTTCATTCGGTTATGTGATGATTTCT
TTGATATGCTGAATGTTTCAAAAACATACGAAGACCAAAAGTCGAACAAA
AAAGCCTTATATCCGTACAAAAGGCAAACTGGTGATTCAGGAGATCAAAG
CGGAGATGTAAGTGGAGATGGAAGGGAAGATGAAAGCAAAGATGAAAGCA
AAGATGGAAGCGGAGATCAAAGCGAAGATGGAAGCGAAGATGAAAGTCAA
TGGCAAGGTAATATGTTGGTCACACATCAGAAACGTTTATGAAGCTGATG
TCAACATCAATGCTGCTGTTCCGGGTTTGAGGAAACTGAACCGTGTCACA
TTTGACCACATTCATCTAACCCCAAGATTGAGGATGCGTGTTAATCTAGC
AGTTCAGGACAACCTGAAGGAGCTGGAAAGGCAATTAAAAGGAAAAGATC
ACGAACCTTCTTCTGCTGATCTCGCCTCTCGTATGCTAACTGTCATGGCC
AGAGGAGTCCTCGCACACTTTAACTACCCAATTGGATATTTTTCTACCAA
AACAGCAAATGCAGACCATTTGTTTAACATTATTTGGGAAGGTGTTAAAG
TAATGGAAGCAACTGGAATGAAGGTGGTTGCCTTTGTTTCAGATGGGGCA
TCTCAAAATAGAAGATTTTACAACATGCATCGATTGGCTGATTCGTCAAA
CGTTTCACCAGAGGGTGTTGTGTACTGGGCAATCAACAAGTTTGATCCTT
CTAGAAAAATATATTTCTTCAGTGATCCGCCGCATCTTATGAAAACCATC
AGAAACAACGTTGAAAAGTCAAGCGCAAATGGTACAAGAAATTTAATGTG
AGATCATTTCTGGGACTTATTCCAGAGCTGCTATCGATTCCAGGTGTTAA
GTACATCCTTTCTGATCGTTTCAACCAAGATCCGTTAGAGGAACATTTCG
GTAAGCATCGGATGCGATGTGGAGCAAACGATAATCCTGCCGAGGAGCAA
TATATGTACAACGAGCGTAAGATTTTAGTGTCAAAATCAGAAATGATGAT
CAAGGGAGGGAATTGTCGAAAACGCAAAAGAAATAAGCAAAAAATCGATA
CATCAGATTGTAGATCCCTTATCAAACGAGCAAAGAAGAGAAAAAAGACA
GTGAAATGATGGCTGGAGAACACCTTCTTGAAATATATTAACGATTGGCA
AGAAGCAGTGGGTAAATTGAAACTTCCGAAGGAGATCAGAGCAAAACGAT
CTCTCAGTTATCAAACGATTGAAGGAATAAGGATGACAGGTGGAGATGAA
AGCAAAGATGAAAGCAGAGAGGTGACCGAAGGTAAAGGTGGTGATGGAAG
CGGAGACAACGAGAATGCTGGTCAAAACAAAGATGGAGAAGATTGGCGTT
TTGATGTCCTTAGCAAATCGATGGCAGATGCTTTAAAGGCTCAAGATTTT
GCACACACAAAAGAAACCGAACATTTCATTCGGTTATGTGATGATTTCTT
TGATATGCTGAATGTTTCAAAAACATACGAAGACCAAAAGTCGAACAAAA
AAGCCTTATATCCGTACAAAAGGCAAACTGGTGATTCAGGAGATCAAAGC
GGAGATGTAAGTGGAGATGGAAGGGAAGATGAAAGCAAAGATGAAAGCAA
AGATGGAAGCGGAGATCAAAGCGAAGATGGAAGCGAAGATGAAAGTCAAT
GGCAAGGTAATATGTTGGTCACACATCAGAAACGTTTATGAAGCTGATGT
CAACATCAATGCTGCTGTTCCGGGTTTGAGGAAACTGAACCGTGTCACAT
TTGACCACATTCATCTAACCCCAAGATTGAGGATGCGTGTTAATCTAGCA
GTTCAGGACAACCTGAAGGAGCTGGAAAGGCAATTAAAAGGAAAAGATCA
CGAACCTTCTTCTGCTGATCTCGCCTCTCGTATGCTAACTGTCATGGCCA
GAGGAGTCCTCGCACACTTTAACTACCCAATTGGATATTTTTCTACCAAA
ACAGCAAATGCAGACCATTTGTTTAACATTATTTGGGAAGGTGTTAAAGT
AATGGAAGCAACTGGAATGAAGGTGGTTGCCTTTGTTTCAGATGGGGCAT
CTCAAAATAGAAGATTTTACAACATGCATCGATTGGCTGATTCGTCAAAC
GTTTCACCAGAGGGTGTTGTGTACTGGGCAATCAACAAGTTTGATCCTTC
TAGAAAAATATATTTCTTCAGTGATCCGCCGCATCTTATGAAAACCATCA
GAAACAACGTTGAAAAGTCAAGCGCAAATGGTACAAGAAATTTAATGTGA
GATCATTTCTGGGACTTATTCCAGAGCTGCTATCGATTCCAGGTGTTAAG
TACATCCTTTCTGATCGTTTCAACCAAGATCCGTTAGAGGAACATTTCGG
TAAGCATCGGATGCGATGTGGAGCAAACGATAATCCTGCCGAGGAGCAAT
ATATGTACAACGAGCGTAAGATTTTAGTGTCAAAATCAGAAATGATGATC
AAGGGAGGGAATTGTCGAAAACGCAAAAGAAATAAGCAAAAAATCGATAC
ATCAGATTGTAGATCCCTTATCAAACGAGCAAAGAAGAGAAAAAAGACAG
TGAAATGATGGCTGGAGAACACCTTCTTGAAATATATTAACGATTGGCAA
GAAGCAGTGGGTAAATTGAAACTTCCGAAGGAGATCAGAGCAAAACGATC
TCTCAGTTATCAAACGATTGAAGGAATAAGGATGACAGGTGGAGATGAAA
GCAAAGATGAAAGCAGAGAGGTGACCGAAGGTAAAGGTGGTGATGGAAGC
GGAGACAACGAGAATGCTGGTCAAAACAAAGATGGAGAAGATTGGCGTTT
TGATGTCCTTAGCAAATCGATGGCAGATGCTTTAAAGGCTCAAGATTTTG
CACACACAAAAGAAACCGAACATTTCATTCGGTTATGTGATGATTTCTTT
GATATGCTGAATGTTTCAAAAACATACGAAGACCAAAAGTCGAACAAAAA
AGCCTTATATCCGTACAAAAGGCAAACTGGTGATTCAGGAGATCAAAGCG
GAGATGTAAGTGGAGATGGAAGGGAAGATGAAAGCAAAGATGAAAGCAAA
GATGGAAGCGGAGATCAAAGCGAAGATGGAAGCGAAGATGAAAGTCAATG
GCAAGGTAATATGTTGGTCACACATCAGAAACGTTTATGAAGCTGATGTC
AACATCAATGCTGCTGTTCCGGGTTTGAGGAAACTGAACCGTGTCACATT
TGACCACATTCATCTAACCCCAAGATTGAGGATGCGTGTTAATCTAGCAG
TTCAGGACAACCTGAAGGAGCTGGAAAGGCAATTAAAAGGAAAAGATCAC
GAACCTTCTTCTGCTGATCTCGCCTCTCGTATGCTAACTGTCATGGCCAG
AGGAGTCCTCGCACACTTTAACTACCCAATTGGATATTTTTCTACCAAAA
CAGCAAATGCAGACCATTTGTTTAACATTATTTGGGAAGGTGTTAAAGTA
ATGGAAGCAACTGGAATGAAGGTGGTTGCCTTTGTTTCAGATGGGGCATC
TCAAAATAGAAGATTTTACAACATGCATCGATTGGCTGATTCGTCAAACG
TTTCACCAGAGGGTGTTGTGTACTGGGCAATCAACAAGTTTGATCCTTCT
AGAAAAATATATTTCTTCAGTGATCCGCCGCATCTTATGAAAACCATCAG
AAACAACGTTGAAAAGTCAAGCGCAAATGGTACAAGAAATTTAATGTGAG
ATCATTTCTGGGACTTATTCCAGAGCTGCTATCGATTCCAGGTGTTAAGT
ACATCCTTTCTGATCGTTTCAACCAAGATCCGTTAGAGGAACATTTCGGT
AAGCATCGGATGCGATGTGGAGCAAACGATAATCCTGCCGAGGAGCAATA
TATGTACAACGAGCGTAAGATTTTAGTGTCAAAATCAGAAATGATGATCA
AGGGAGGGAATTGTCGAAAACGCAAAAGAAATAAGCAAAAAATCGATACA
TCAGATTGTAGATCCCTTATCAAACGAGCAAAGAAGAGAAAAAAGACAGT
GAAATGATGGCTGGAGAACACCTTCTTGAAATATATTAACGATTGGCAAG
AAGCAGTGGGTAAATTGAAACTTCCGAAGGAGATCAGAGCAAAACGATCT
CTCAGTTATCAAACGATTGAAGGAATAAGGATGACAGGTGGAGATGAAAG
CAAAGATGAAAGCAGAGAGGTGACCGAAGGTAAAGGTGGTGATGGAAGCG
GAGACAACGAGAATGCTGGTCAAAACAAAGATGGAGAAGATTGGCGTTTT
GATGTCCTTAGCAAATCGATGGCAGATGCTTTAAAGGCTCAAGATTTTGC
ACACACAAAAGAAACCGAACATTTCATTCGGTTATGTGATGATTTCTTTG
ATATGCTGAATGTTTCAAAAACATACGAAGACCAAAAGTCGAACAAAAAA
GCCTTATATCCGTACAAAAGGCAAACTGGTGATTCAGGAGATCAAAGCGG
AGATGTAAGTGGAGATGGAAGGGAAGATGAAAGCAAAGATGAAAGCAAAG
ATGGAAGCGGAGATCAAAGCGAAGATGGAAGCGAAGATGAAAGTCAATGG
CAAGGTAATATGTTGGTCACACATCAGAAACGTTTATGAAGCTGATGTCA
ACATCAATGCTGCTGTTCCGGGTTTGAGGAAACTGAACCGTGTCACATTT
GACCACATTCATCTAACCCCAAGATTGAGGATGCGTGTTAATCTAGCAGT
TCAGGACAACCTGAAGGAGCTGGAAAGGCAATTAAAAGGAAAAGATCACG
AACCTTCTTCTGCTGATCTCGCCTCTCGTATGCTAACTGTCATGGCCAGA
GGAGTCCTCGCACACTTTAACTACCCAATTGGATATTTTTCTACCAAAAC
AGCAAATGCAGACCATTTGTTTAACATTATTTGGGAAGGTGTTAAAGTAA
TGGAAGCAACTGGAATGAAGGTGGTTGCCTTTGTTTCAGATGGGGCATCT
CAAAATAGAAGATTTTACAACATGCATCGATTGGCTGATTCGTCAAACGT
TTCACCAGAGGGTGTTGTGTACTGGGCAATCAACAAGTTTGATCCTTCTA
GAAAAATATATTTCTTCAGTGATCCGCCGCATCTTATGAAAACCATCAGA
AACAACGTTGAAAAGTCAAGCGCAAATGGTACAAGAAATTTAATGTGAGA
TCATTTCTGGGACTTATTCCAGAGCTGCTATCGATTCCAGGTGTTAAGTA
CATCCTTTCTGATCGTTTCAACCAAGATCCGTTAGAGGAACATTTCGGTA
AGCATCGGATGCGATGTGGAGCAAACGATAATCCTGCCGAGGAGCAATAT
ATGTACAACGAGCGTAAGATTTTAGTGTCAAAATCAGAAATGATGATCAA
GGGAGGGAATTGTCGAAAACGCAAAAGAAATAAGCAAAAAATCGATACAT
CAGATTGTAGATCCCTTATCAAACGAGCAAAGAAGAGAAAAAAGACAGTG
AAATGATGGCTGGAGAACACCTTCTTGAAATATATTAACGATTGGCAAGA
AGCAGTGGGTAAATTGAAACTTCCGAAGGAGATCAGAGCAAAACGATCTC
TCAGTTATCAAACGATTGAAGGAATAAGGATGACAGGTGGAGATGAAAGC
AAAGATGAAAGCAGAGAGGTGACCGAAGGTAAAGGTGGTGATGGAAGCGG
AGACAACGAGAATGCTGGTCAAAACAAAGATGGAGAAGATTGGCGTTTTG
ATGTCCTTAGCAAATCGATGGCAGATGCTTTAAAGGCTCAAGATTTTGCA
CACACAAAAGAAACCGAACATTTCATTCGGTTATGTGATGATTTCTTTGA
TATGCTGAATGTTTCAAAAACATACGAAGACCAAAAGTCGAACAAAAAAG
CCTTATATCCGTACAAAAGGCAAACTGGTGATTCAGGAGATCAAAGCGGA
GATGTAAGTGGAGATGGAAGGGAAGATGAAAGCAAAGATGAAAGCAAAGA
TGGAAGCGGAGATCAAAGCGAAGATGGAAGCGAAGATGAAAGTCAATGGC
AAGGTAATATGTTGGTCACACATCAGAAACGTTTATGAAGCTGATGTCAA
CATCAATGCTGCTGTTCCGGGTTTGAGGAAACTGAACCGTGTCACATTTG
ACCACATTCATCTAACCCCAAGATTGAGGATGCGTGTTAATCTAGCAGTT
CAGGACAACCTGAAGGAGCTGGAAAGGCAATTAAAAGGAAAAGATCACGA
ACCTTCTTCTGCTGATCTCGCCTCTCGTATGCTAACTGTCATGGCCAGAG
GAGTCCTCGCACACTTTAACTACCCAATTGGATATTTTTCTACCAAAACA
GCAAATGCAGACCATTTGTTTAACATTATTTGGGAAGGTGTTAAAGTAAT
GGAAGCAACTGGAATGAAGGTGGTTGCCTTTGTTTCAGATGGGGCATCTC
AAAATAGAAGATTTTACAACATGCATCGATTGGCTGATTCGTCAAACGTT
TCACCAGAGGGTGTTGTGTACTGGGCAATCAACAAGTTTGATCCTTCTAG
AAAAATATATTTCTTCAGTGATCCGCCGCATCTTATGAAAACCATCAGAA
ACAACGTTGAAAAGTCAAGCGCAAATGGTACAAGAAATTTAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032004XLOC_032004Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050534-proteinTCONS_00050534-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050534-exon-scaffold_179-1575043694:20437..20878TCONS_00050534-exon-scaffold_179-1575043694:20437..20878Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1575043694:20000..20161TCONS_00050534-exon-scaffold_179-1575043694:20000..20161Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1575043694:19420..19708TCONS_00050534-exon-scaffold_179-1575043694:19420..19708Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1575043694:19232..19347TCONS_00050534-exon-scaffold_179-1575043694:19232..19347Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1575043694:18754..18883TCONS_00050534-exon-scaffold_179-1575043694:18754..18883Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1575043694:18245..18621TCONS_00050534-exon-scaffold_179-1575043694:18245..18621Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1510915933:20437..20878TCONS_00050534-exon-scaffold_179-1510915933:20437..20878Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1510915933:20000..20161TCONS_00050534-exon-scaffold_179-1510915933:20000..20161Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1510915933:19420..19708TCONS_00050534-exon-scaffold_179-1510915933:19420..19708Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1510915933:19232..19347TCONS_00050534-exon-scaffold_179-1510915933:19232..19347Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1510915933:18754..18883TCONS_00050534-exon-scaffold_179-1510915933:18754..18883Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1510915933:18245..18621TCONS_00050534-exon-scaffold_179-1510915933:18245..18621Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1491911889:20437..20878TCONS_00050534-exon-scaffold_179-1491911889:20437..20878Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1491911889:20000..20161TCONS_00050534-exon-scaffold_179-1491911889:20000..20161Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1491911889:19420..19708TCONS_00050534-exon-scaffold_179-1491911889:19420..19708Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1491911889:19232..19347TCONS_00050534-exon-scaffold_179-1491911889:19232..19347Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1491911889:18754..18883TCONS_00050534-exon-scaffold_179-1491911889:18754..18883Clytia hemisphaericaexon
TCONS_00050534-exon-scaffold_179-1491911889:18245..18621TCONS_00050534-exon-scaffold_179-1491911889:18245..18621Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_179supercontigscaffold_179:18245..20878 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0542888	0.10588	0.0307343	0.0300687	0.878538	0.202485	0.418781	0.196029	0.365985	0.311666	0.330011	0.650809	0.12637	0.131237	0.231202	0.248116	0.285281	0.0835439	0.0288551	0.0301948	0.183713	0.192019	0.186739	0.198069	0	0.130051	0.297763	0.119168	0.361538	0.337654
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050534 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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