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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050462 ID=TCONS_00050462|Name=TCONS_00050462|organism=Clytia hemisphaerica|type=transcript|length=2349bp
TGCAAACTCGCACTGATGCATGATTAGTAAAAGTGTGTACTCAATTTTCT
tcttgtcattgttttgatgatACAGTATAGTAGGCTTGAGTGTTttcaat
tattcaacatgaaTTTGTGATATCATCAATTATGTTTTCAATTGCTTTAT
ATCTAATAGATTATAAAAGATTGAGAAAGATGAGGTTACGCGACGGGAAA
CAAGTTTCTTCTAAGGAGGATACAACTATGGCTAACAGAGACACTGAACT
GGAcaagaaaaaatcagaaagtgaAGAAAAGGCAAACCTTGAAGGAGATT
ACAACAATGTAGCCTTGTTGCTTTTACTATACATTTTGCAAGGAATCCCA
CTGGGAATGGCTGCTAGTATACCTATGAtattacaaaacaaaaaagtcaa
ttACAAGCAACAAGCTATGTTCAGTCTCGTTTATTGGCCATTCAGCTTGA
AGCTACTATGGGCACCTTTTGTTGATGCAGCATTTTTTAGATCATTTGGA
CGCAGAAAGACTTGGCTGGTTCCTGTTCAATATTTGATTGCTTTGTTTAT
GTTGGTTTTGTCTGCGAAAATCAATGATGTATTAGAGGCTGAGAATCCAA
ATGTCATACTCTTGACAGCTGTGTTCTTCTCACTCAACTTCCTGGCGGCT
ACTCAAGACATTGCAGTTGATGGATGGGCACTGACAATGCTTCACAGGCG
TAATGTAGGATATGCATCAACTTGCAACAGTGTTGGTCAAACAGCTGGTT
GGTTCATTGGGAATGTTGTCTTGTTAGCTTTCTCGTCTCCTGATTTCAGT
AATAAATATATCCGGTCAGTGCCGCAAGATGTTGGTCTGGTCACTTTGTC
AGGTTTTCTGTTCTTCTGGGGAATCGTGTTTTTGATCACCACCACATTGG
TAATGTTATTTAAACGTGAAGAAAATGAGGTGGATGTAGAAGACCATGGT
GTGATGGGAATGTATATGATGTTGCTGAAGATCCTCAACCTTCCTGCCAT
CAAAGAACTTGCACTTATGCTACTCACTGTTCGAATCGGTACAGCGGCAG
CTGATTCAGTGACTGGTTTGAAATTGATCGAAGCAGGTGTCAAGAAAGAA
TCACTTGCAATGTTGGCCGTTCCTTTGGTTCCTCTACAGATCATCCTACC
CTTAATCATCAGTAAATTTACTGCAGGTCCACGCCCACTGAACGTCTATG
CGAATGCCATTCCATTTCGCCTGTTGATGGGCCTGGTGTTTGCATTGCTG
GTGTATTGGACGCCTTCTGTACGAGCGCCTGGCGAAGAGGAATTTCCGTA
TTACTATTTCTTTGTTATCTTGTCCATTTACGCTTTACANTGAAGAGGAG
TTTCCGTATTACTATTTCTTTGTTATCTTGTCCATTTACGCTCTACATCA
GGTGGCAGTTTATTCCATGTTCGTTTCCATCATGGCTTTCCACGCCAAAG
TGAGTGATCCTACCATCGGTGGTACATACATGACTCTTCTGAACACTATT
TCCAATCTGGGATCCAACTGGCCTGCTACTTTAGTCCTGTGGCTGGTTGA
CCCTCTCACCATGAAACAATGCACAGATGGTGGATTGGGAAATGAAGCTA
ACACTTGCTCAACACCTGATTTCACTAAGCAATGCACTGATGCTGGTGGT
AAATGCAATACTTATATTGATGGATACTACATCGAATCTATTTCATGTGT
AGTCATCGGCTTCATGTGGCTCCTATGGCGAAGGCGCTCATTACAAAATT
TGCAAAGCTATAAAGCAACTGCTTGGAAAGTAACTTAAAACTTTTATAGT
GGTTTGTTTTATCGTGATACTTTTGAGGCCTCTAAATTTNGAACTTTGAT
AGTAGTTTGTTTTATCATGATGCTTTTGAGGACTCTAAATTTCTAGAACG
CCAGGATGGAACCATGTTCTACCCATGTGTTAGATAAGTGAGTGATCCTT
TAGCTCAAGGGATCTACTCACTCAAGTAACTTTGAAGagttttcataaat
tttacttTGCTCCtatgacgtaattttttatCTGGAAAGTGTTGGAAAGC
TCATTTCATATGGAGTTGGGCTTTCGCATAGCATGAATATAAGAACCAGA
GGTTTTCACTGAAGTCAGGATAAACTTGACTTACTGTTCGAATAGATTTA
Tctcgagtttttttttttaattttaggaatttttattatatttcttcagc
atttaacttttatttatttttagaaaattgaaacaaCTATTCAAATACTT
TGAGAATATAAACATAGATAAAGGGGAAATTTACtatggaaactattttt
cttgcCTGGACCAAGGAAGTATATTTCggtaaatgataaaaaatgacag Run BLAST on NCBI transcript from alignment at scaffold_172:49349..58779- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050462 ID=TCONS_00050462|Name=TCONS_00050462|organism=Clytia hemisphaerica|type=transcript|length=9431bp|location=Sequence derived from alignment at scaffold_172:49349..58779- (Clytia hemisphaerica)
TGCAAACTCGCACTGATGCATGATTAGTAAAAGTGTGTACTCAATTTTCT
TCTTGTCATTGTTTTGATGATACAGTATAGTAGGCTTGAGTGTTTTCAAT
TATTCAACATGAATTTGTGATATCATCAATTATGTTTTCAATTGCTTTAT
ATCTAATAGATTATAAAAGATTGAGAAAGATGAGGTTACGCGACGGGAAA
CAAGTTTCTTCTAAGGAGGATACAACTATGGCTAACAGAGACACTGAACT
GGACAAGAAAAAATCAGAAAGTGAAGAAAAGGCAAACCTTGAAGGAGATT
ACAACAATGTAGCCTTGTTGCTTTTACTATACATTTTGCAAGGAATCCCA
CTGGGAATGGCTGCTAGTATACCTATGATATTACAAAACAAAAAAGTCAA
TTACAAGCAACAAGCTATGTTCAGTCTCGTTTATTGGCCATTCAGCTTGA
AGCTACTATGGGCACCTTTTGTTGATGCAGCATTTTTTAGATCATTTGGA
CGCAGAAAGACTTGGCTGGTTCCTGTTCAATATTTGATTGCTTTGTTTAT
GTTGGTTTTGTCTGCGGTATGTTATAGGCGGGGGAGGTGGAACTTCATAA
ATCATAAAATGGGTAGTCATAATTATTACGTGATATTGGATTGAAGTGAT
TTTCTGTAGGAAAGTGAAGGTTTTTGACACTTTTTGGCAAAAAGTAATTC
AATTGGGTTCATTATAAATTGATTTTGGTGTTGAAAAAATTTAAAAAATA
TAAAACAAACTGGGAAGTGTAAAAACGTAACAAAGGGTTGGATATCCAGG
GGTTCGTTTTTCTAAAACTTGTGAATACCCAAGGGGTCATACAGCTTGAA
AAATAAAAACTGACAAAATATTGAACTTTTTCAACCTTCAACTTACTATT
CTTGAGAATACAGCAAGGAAATGTTTGTAAGTTCGAGTCAAGATTCAAAT
CTATCTAATTACAAAAATCTAAAAATTGCCTATAAATTGATATCATCCTC
TACATATTTTTTGGAAAAATTCGAGTTTTTATTCTTCCAAGTTTACAAAT
AAGCTTAACGTGTATAAGTTTATCAATTGCTATGAATTATTATTAATTCA
AATTGCTAGGTTTCAAAATCCTACTTTGGTAAGCTAAGACAGTGGGAACT
TTCATAACTTCCGAACGACTCTATTGTCTAATACCTCTAATACTTATTTT
TTCATTCCATAGAAAATCAATGATGTATTAGAGGCTGAGAATCCAAATGT
CATACTCTTGACAGCTGTGTTCTTCTCACTCAACTTCCTGGCGGCTACTC
AAGACATTGCAGTTGATGGATGGGCACTGACAATGCTTCACAGGCGTAAT
GTAGGATATGCATCAACTTGCAACAGTGTTGGTCAAACAGCTGGTTGGTT
CATTGGGAATGTTGTCTTGTTAGCTTTCTCGTCTCCTGATTTCAGTAATA
AATATATCCGGTCAGTGCCGCAAGATGTTGGTCTGGTCACTTTGTCAGGT
AAGGATATTTATCTTACCATCTCCAATCCTTAGAATTTATTTTTATTTAC
ATTTTAAAATCGTTACTTCTTAGTAACTCTCTTATCGTAGTTCTTCCTTT
GAATATGGACAAATGTCTTGAAATTAACAAATTCATCTCGGGGGCGTGAG
CTGGCGTGAGTAGAATTCTACTTTAAATCATAATCTGTCTTGCATTATGT
GCAGGTTTTCTGCTCTCAAATGAACATCTTCATGTTTTGCATTTTGTGCA
GGTTTTCTGTTCTTCTGGGGAATCGTGTTTTTGATCACCACCACATTGGT
AATGTTATTTAAACGTGAAGAAAATGAGGTGGATGTAGAAGACCATGGTG
TGATGGGAATGTATATGATGTTGCTGAAGATCCTCAACCTTCCTGCCATC
AAAGAACTTGCACTTATGCTACTCACTGTTCGAGTAAGATCAATTAATTT
CAACTTTTGTTCAGCTCTCGGTTGAGTATCATTGTCGATACTTTAATCCT
ATTAATTTTTTTGCATCTTTTTATTTCTGAGAAAACTTTTAGTGTTTTTG
AAAAAAAACACAACACGACAAAGACACGACATCAAAAGTTTTGCTCGCCT
CTGGTCTGTATTTTAGCCAGATCTTACATTTCAGAGGTTTGTTTAACCTA
GTAATCAAAAGTTTTGATTCATATCTTCTTTTAGATCGGTACAGCGGCAG
CTGATTCAGTGACTGGTTTGAAATTGATCGAAGCAGGTGTCAAGAAAGAA
TCACTTGCAATGTTGGCCGTTCCTTTGGTTCCTCTACAGATCATCCTACC
CTTAATCATCAGTAAATTTACTGCAGGTAGAATAGCTTAAGTGTCAAGAG
CCTGTCAGTACTTCTCTTACCAACGCTCCGTGCGAGTGAGACTCACTCTT
TGAAAATGTATGACAAATTCGAAAAATTGGACTGCAAAACCCTGTAATTG
CCGAAAATTTCTCATAGTCTATTCATTCAATAATTCCTGAAGTTCATTAA
TTATTATCTTAATTGGTTATTGCTCTTATTACTGCTATGTTATACAAGTG
GCTCCTGTTGAAGACAATGGGTAAGCTGCCTAAAAGCTAAGTGGTTATTC
AGAGAACAAGCACTTAAAATATTATTCATAATAATTATTGTTATTTATAC
TCGTGTTCTAGTAACGTCCTTTTCATTTTAGGTCCACGCCCACTGAACGT
CTATGCGAATGCCATTCCATTTCGCCTGTTGATGGGCCTGGTGTTTGCAT
TGCTGGTGTATTGGACGCCTTCTGTACGAGCGCCTGGCGAAGAGGAATTT
CCGTATTACTATTTCTTTGTTATCTTGTCCATTTACGCTTTACANTGAAG
AGGAGTTTCCGTATTACTATTTCTTTGTTATCTTGTCCATTTACGCTCTA
CATCAGGTGAGTGCACCGAATCATACTTTATAATTAAACTAGCCGGTACC
CGGCGTCGCACGCCGGTTTAGCTGTTTGCTGAACGCATTTAAAGTCCTTT
GAGATGTTGGGAAGGTGGCTTAAACACGATGAAATCAAAATTAAAGGGAA
GAATTCTCTTCAAACTTCACTCTATCCCTCCTGGGTGACGTATCTTTTAA
CCATATTTTGAAAAAGATTTTTGTGGCAAAAATGATTAGAAAACAGAAAG
GGCGTCATACCCAAATTAAACCATACCGGCGACCAGCGACGTCCGAGACG
GCTCTACAATTAGATTTTTTTCTCGTTTCGCTCGCGTTATATTTGCCGTA
GTTCTTGATGTTTAGGAAAACTTTGATGTCAAGATACCTTATCGGGGAAA
ACTTCGTCGGGGAAAAGTGATAAAATTTCGGCGAAGTGACGAATATTTTT
CCCGACGAAAATTTTCCCGGCTTTAATGCGTTTACCAAAACCAGCAAGTG
AAGAATATTTTTCCCCGACGAAAATTTTCCCCGACGAAGTTTTCCCCGAT
AAGGTAAGCGGAGTGAAATAATAGACATGACACGCGATTCGTCGAAAAAA
GGCAGCCGGGGGGGGGGGGACTTAGGCAAGGGAAGGGTANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTTTGAAACATAGCAGTTTGAAAAATCGGAAAATCAAAC
TTCAGTCCCACTAAGAATTGGAAAAATAGGAAAATTTCAATTTTTTGCCC
CCAGAAAGATAGAATTTGGTCAAATTAGTTCCAAAAAGTGAATTAAAATT
CACACAATTTCCCTTGTTTCTTCTCCTCTTTATTCTGCTAAGGGTCCGAG
GGGCAAACTTCGTCATAACTTCAATAATTTTTCAAATTCAACAATGACTT
AGATTTACAGCAAAATAATTATCGACATACATGTTTAAAGGTCCCTTTTT
ACAAAGAAAGAATTCTAGTTTTTACCGCCATTTCTTTTGAATGTATTTTA
AATGTTGCTGTTGTTCTAAAAAACTTGTCTTGTGATTCTTGTGTTTTATT
TTATATTTGTTCTTTTCTTTAACAGATTCTGTTTAAAAGATTTCTTTTGT
TTTGAAAAGAATTCGAATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGGAGCAAGAAGCAAAA
GTCATCTTTTGAAAGAACAAAACATTGCTTGCGAAAACGAAAGTGACACA
CAAAAAACAAACCAACAAACAAACATACATACAGACTACGGCTATTAATA
TATAGATTTATTTTTATTGGGAAAATAATACCTTAAGTGGATAAATTTTG
GCGGGGATTAAATTTGGCGAATTTGGCGATTTCTTCCAAAATTCCCCAAA
TTAAATCCTCGCCAAAATTTCAAAAATTGACCATTCGCCAAATTAAATCC
CCGCCAAATTTAATAAAAAATTTTTAAGATAGAAATTCAATGGAGAACAC
GTATTTCTTAGTAAAATACCACGTATTTTTTTAGTTCACCAGAGACCAAA
GCCTTCCCACTCGCCAAATTAAATCCCCGCTAAATTTTACATAATTGAGC
ATTCGCCAAATTAAATCCCCGCCAAAAATCGCACTTTGGTCATTCGCCAA
ATTAAATCCACGCCAAAATTTATCCACTTAAGGTAGTATGCCATGAAAAG
TACAAGAAATCAATTTTCCTAGAAAAATACAAAAAATTTACTTCCCTAGG
AAAATACAAACCTTTAATGTTCCTAGGAAAACACAAAAAGTTAATTTTCC
TAGGAAAACACAAAAAAATAATTTTCTAAGAAATATACATAAAATTAATT
TTTTTAGAAAAATACACAAAATTTATTTTCCTAGGAAAATACAAACAATT
AATTTCACTAGAAAAACACAAAAAATTTACTTTCCTAGGAAAATACAAAC
CTTTAATGTTCCTAGGAAAACACAAAAAATTAATTTTCCTAGGAAAACAC
AAAAAATTAATTTTCTAAGAAATATACATAAAGTTAATTTTTTTAGAAAA
ATACACAAAATTCATTTTCCTAGGAAAATACAAACAATTAATTTCACTAG
AGAAACACAAAAAAATAATTTTCCTAGAAAAATACATACCGTAAATCCTC
AAATAAGCGCCCTGCTCAAATAATCGCCCCCCTTTTAGTTAAAATAATAT
TATAAGCGCCCAACTCGAATAAGCGCCCCCCTTTGAATAAGCGCCCCATC
CAGGGAGGGGCGCTTATTCGAATATTGTTGTTGATTGAATATGATATTGA
GTAGATACTTGTGTCTTAAAAAGAAAGAAAACGATTAAGAATAAAATGAT
AGACATTGTCAATTTCAAAATCATTTCTTTTATTCTTCCTTTTTTGAAAA
ATAAACCCTTTGAAACAGTTAAATTTAAGCAGATTCCAAATTTGTTGATA
TACTAATTTCTGAAATAAAAAAATCAACATAAAAGGGCTTGCGGAACGAG
CGTTCTGTTTTCGCAAAGCGAAGAAATCTCAAAATGTATAAGAAATCGAC
GACTCCATTATTAATACAGAATTTAAAAAACAAACTAATAAGACCTTTAC
CTTTCACCAATAATTTATTGCTAGTGAGTCATAACAATAATGTCAAAGAA
GAGGATGTTGAAAAAATTAAAAGACAGATAAAAAAGTCATTTGTACTCGA
TTTTGTAATACTTTTGTAGTAGTTTCAAAAAATCTTCCTGGAAAAAGTAT
AAAGTAAGCTGCTCAATACAACTTTTCACAAGGTAAAATAAAAAAAATAA
AAAAATAAAACTGTAAAGAGTAACATCGTAGCATGGACTTAATAACATAG
GGGGATTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACACT
TTTATTTTATAAAAAAAAGAAAAGTCTACTTTGCTCGGGGTTTTTTCGTG
AGCCAAATCGGTAGCATTTCTCGAACATATACAAATTTACGTCCCGCGTA
CACAGATCTTGCCAAAGGATGCGGAACGCGCGTTTGAGCGCGCTGCGCGC
GCTCAAACGCACGTTCCGCAAAAAGCGCCCCGCTCGAATAAGCGCCCCCC
TTAGAGCCTGAAAAATTAGTTATTCGAGGATTTACCTAGGAAAATACAAT
GAAATTCATTTTCGTCTGAAAATAGAAGAAGTCAATTTTTTTCATTAAAT
TGATTCTCCCTAGAAAATTACAAGAAATTAGTTATCCTTGCAAAAAGAAA
TATGGCATAATCTGTCATAATATTTCGTTCCCAGGTAGATACAAGAAAGA
TGAAAGTTATTTATAATGATAAATTTGGACGATCACAATTTCCCTAGATC
ATTATAAACAATAAATGAATTTTTAATTTCCAGGTGGCAGTTTATTCCAT
GTTCGTTTCCATCATGGCTTTCCACGCCAAAGTGAGTGATCCTACCATCG
GTGGTACATACATGACTCTTCTGAACACTATTTCCAATCTGGGATCCAAC
TGGCCTGCTACTTTAGTCCTGTGGCTGGTTGACCCTCTCACCATGAAACA
ATGCACAGATGGTGGATTGGGAAATGAAGCTAACACTTGCTCAACACCTG
ATTTCACTAAGGTATACTTTCGAAATGAAGATTGAATTAATATCCTTGAA
AGCCTCGTTTTTGTAATGGAATAGCTACAGATGACTCTCGCTAATTCGAA
CTCTAACGGGGAGTCTTACTTGTTCGAATAACGGAGAGAATCGAATTATA
GAGGATTTAAGAGGGTTTCTCCCTGACGGGAACTGAGAAAAAGTTCGAAT
TATAGAAAGATTCCAATGATAGGAGTTCGGATACGCGAGAGTCTTCTGTA
TATCGAAAAAACATAATAAGGTTTGAACAAAGAAAACGAGTCTTCAGTGA
AATCCATCCTATATTTGACACATTTGATAGTTGGTCTAAAAGACTCTTTT
ACTTTTGAATGCAACCACTCACAAACACTTGTTATGTCAAATAATATTGA
TCTTGATGTAGTAGGGGAACAACCCTTGGAATCCGTTGCATGATTCATGG
GACTCAACCGCGTGTGATTGGTTCGAAAGTAGATTTTGAAACTTTCTTGA
GAGGGGGCCGGGATTTAGGCCCAGCAGAAGTTTTTATTGCTAAAAACTGA
CGTTGTAGGCAAGATTCCTAACCCCCAAAATAGGTAAAAAAACTTACGAA
TTTTTAAAATACTGAGCAAAAAAAAGACAACAATTCCCTAATTTTTCAAT
CCTCTTTTTAGCAATGCACTGATGCTGGTGGTAAATGCAATACTTATATT
GATGGATACTACATCGAATCTATTTCATGTGTAGTCATCGGCTTCATGTG
GCTCCTATGGCGAAGGCGCTCATTACAAAATTTGCAAAGCTATAAAGCAA
CTGCTTGGAAAGTAACTTAAAACTTTTATAGTGGTTTGTTTTATCGTGAT
ACTTTTGAGGCCTCTAAATTTNGAACTTTGATAGTAGTTTGTTTTATCAT
GATGCTTTTGAGGACTCTAAATTTCTAGAACGCCAGGATGGAACCATGTT
CTACCCATGTGTTAGATAAGTGAGTGATCCTTTAGCTCAAGGGATCTACT
CACTCAAGTAACTTTGAAGAGTTTTCATAAATTTTACTTTGCTCCTATGA
CGTAATTTTTTATCTGGAAAGTGTTGGAAAGCTCATTTCATATGGAGTTG
GGCTTTCGCATAGCATGAATATAAGAACCAGAGGTTTTCACTGAAGTCAG
GATAAACTTGACTTACTGTTCGAATAGATTTATCTCGAGTTTTTTTTTTT
AATTTTAGGAATTTTTATTATATTTCTTCAGCATTTAACTTTTATTTATT
TTTAGAAAATTGAAACAACTATTCAAATACTTTGAGAATATAAACATAGA
TAAAGGGGAAATTTACTATGGAAACTATTTTTCTTGCCTGGACCAAGGAA
GTATATTTCGGTAAATGATAAAAAATGACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050462-exon-scaffold_172-1575043694:58214..58779 | TCONS_00050462-exon-scaffold_172-1575043694:58214..58779 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1575043694:57282..57567 | TCONS_00050462-exon-scaffold_172-1575043694:57282..57567 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1575043694:56847..57028 | TCONS_00050462-exon-scaffold_172-1575043694:56847..57028 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1575043694:56454..56595 | TCONS_00050462-exon-scaffold_172-1575043694:56454..56595 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1575043694:55874..56098 | TCONS_00050462-exon-scaffold_172-1575043694:55874..56098 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1575043694:50719..50946 | TCONS_00050462-exon-scaffold_172-1575043694:50719..50946 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1575043694:49349..50068 | TCONS_00050462-exon-scaffold_172-1575043694:49349..50068 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1510915933:58214..58779 | TCONS_00050462-exon-scaffold_172-1510915933:58214..58779 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1510915933:57282..57567 | TCONS_00050462-exon-scaffold_172-1510915933:57282..57567 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1510915933:56847..57028 | TCONS_00050462-exon-scaffold_172-1510915933:56847..57028 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1510915933:56454..56595 | TCONS_00050462-exon-scaffold_172-1510915933:56454..56595 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1510915933:55874..56098 | TCONS_00050462-exon-scaffold_172-1510915933:55874..56098 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1510915933:50719..50946 | TCONS_00050462-exon-scaffold_172-1510915933:50719..50946 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1510915933:49349..50068 | TCONS_00050462-exon-scaffold_172-1510915933:49349..50068 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1491911889:58214..58779 | TCONS_00050462-exon-scaffold_172-1491911889:58214..58779 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1491911889:57282..57567 | TCONS_00050462-exon-scaffold_172-1491911889:57282..57567 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1491911889:56847..57028 | TCONS_00050462-exon-scaffold_172-1491911889:56847..57028 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1491911889:56454..56595 | TCONS_00050462-exon-scaffold_172-1491911889:56454..56595 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1491911889:55874..56098 | TCONS_00050462-exon-scaffold_172-1491911889:55874..56098 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1491911889:50719..50946 | TCONS_00050462-exon-scaffold_172-1491911889:50719..50946 | Clytia hemisphaerica | exon |
| TCONS_00050462-exon-scaffold_172-1491911889:49349..50068 | TCONS_00050462-exon-scaffold_172-1491911889:49349..50068 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_172 | supercontig | scaffold_172:49349..58779 - |
Blast
BLAST of TCONS_00050462 vs. Swiss-Prot (Human)
Match: ACATN (Acetyl-coenzyme A transporter 1 OS=Homo sapiens GN=SLC33A1 PE=1 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 7.325e-145 Identity = 207/333 (62.16%), Postives = 254/333 (76.28%), Query Frame = 3
Query: 357 MAASIPMILQNKKVNYKQQAMFSLVYWPFSLKLLWAPFVDAAFFRSFGRRKTWLVPVQYLIALFMLVLSAKINDVL---EAENPNVILLTAVFFSLNFLAATQDIAVDGWALTMLHRRNVGYASTCNSVGQTAGWFIGNVVLLAFSSPDFSNKYIRSVPQDVGLVTLSGFLFFWGIVFLITTTLVMLFKREENEVDV---EDHGVMGMYMMLLKILNLPAIKELALMLLTVRIGTAAADSVTGLKLIEAGVKKESLAMLAXXXXXXXXXXXXXXSKFTAGPRPLNVYANAIPFRLLMGLVFALLVYWTPSVRAPGEEEFPYYYFFVILSIYAL 1337
+A SIP+ILQ+K V+Y QA FS V+WPFSLKLLWAP VDA + ++FGRRK+WLVP QY++ LFM+ LS +++ +L + P+VI LT FF FLAATQDIAVDGWALTML R NVGYASTCNSVGQTAG+F+GNV+ LA S DF NKY+R PQ G+VTLS FLFFWG VFLITTTLV L K+ ENEV V E G+ Y +L I+ +PA+ L++LT +IG +AAD+VTGLKL+E GV KE LA+LAVP+VPLQIILPLIISK+TAGP+PLN + A+P+RLL+GL +ALLV+WTP V G FP YY+ V+L YAL
Sbjct: 91 LAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYVKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALTVAFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKK-ENEVSVVKEETQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQG--GFPIYYYIVVLLSYAL 420 HSP 2 Score: 167.933 bits (424), Expect = 7.325e-145 Identity = 80/136 (58.82%), Postives = 97/136 (71.32%), Query Frame = 1
Query: 1372 VILSIYALHQVAVYSMFVSIMAFHAKVSDPTIGGTYMTLLNTISNLGSNWPATLVLWLVDPLTMKQCTDGGLGNEANTCSTPDFTKQCTDAGGKCNTYIDGYYIESISCVVIGFMWLLWRRRSLQNLQSYKATAWK 1779
V+L YALHQV VYSM+VSIMAF+AKVSDP IGGTYMTLLNT+SNLG NWP+T+ LWLVDPLT+K+C +G C TPD + C GG C T +DGYY+ESI CV IGF W + + LQ +++WK
Sbjct: 413 VVLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKEC----VGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGSSSWK 544
The following BLAST results are available for this feature:
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