TCONS_00050431 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050431
Unique NameTCONS_00050431
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3764

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050431 ID=TCONS_00050431|Name=TCONS_00050431|organism=Clytia hemisphaerica|type=transcript|length=3764bp
caagcatgattcaattgtcaataaaactgatttttgcgaccagaacttcc
tattaattttttccctacaacccttctctctccccccatcaacaatcaat
gatgaatttattgtgttgtgtattttcgctaaatgctatatattttctga
ctgattttttttatttttcttttcgcattgctaactaactttcatcatca
ggtaggtccattcagcatgttgcttgttttacttttaaaaataaactttG
CAATGCCATGTCGTTAGTGAtatctattttgttttttacgtttgttttat
gtttggcaatttcttttctgtttttaaaaatatatattttactttATCTC
TTTTAAGAAACGGTTCCATctttacattttaaaaaatgGCCATTCCACCG
ACAAGCGCTACTGGTTCTTTCGACATACCGCTGACAAGCACTACTGGTTC
TGTCACCATTCCGCCAACGAGTGCTACTGTTTCTGTCACCATTCCGCAAA
CGAGCGCTACAGGTTCTGTCGCCATACAGCCGACTAGCACTACTGGTTCT
GTCGCCATGCCGCCGACTAGCACTACTAGTTCTGTTGCCATTCCACTGAC
AAGCACTACTGGTTCTGTCGCCATACCAGCTTTTACTTTATCTCTTTTAA
GAAACGGTTCTCTCTTTACATTTTACAAAAAGGCCATACCGTCGGCAAGC
GCTACTGGTTCAGTCGCCATTACACCGACGAGCACCACTGGTTCTGTCAC
CATACCGCCGACAAGCACCACTGGTTCTGTCGCCATTCCACCAACTAACG
CTACTGTTTCTGTCACCATTCCACCAACAAGCGCTACTGGTTCTGTCGCC
ATTCCGCCAACAAGCACTACTGGTTCTGTCACAATTCTGCCGACGAGCGC
TCCTTTCTCCGTCGTCATACCGCCGACGAGCACTACTGGTTCTGTCGCCA
TTTCACTGAAGAGCCTTCTTCGTTCTGTGGCCATTCCACCAACAAGCGCT
ACTGGTTCTGTTGTCATACTGCCGACGAGCACTAATGGTTCTGTCGCCAT
ACCGCCAACGAGCACTACTGGTTCTTTCGACATTCCCCCGACGAGCACTA
ATGGTTCTGTCTTCATTTCGCTGAGGAGCCTTCTTGGTTCTGTGGCCATT
CCGCCGACGAGCGCTACTGGTTCTGTCGCTATACCACCGACGAGCACTAC
CGGTTCTGTCGCTATACCGCCAACGAGCACTACCGGTTCTGTTGCCATTC
CACCTTCGAGTGCTACTGGTTCTGTCGCCATTCCGCTGATGAGCACTACT
GGTTCTGTCGCCATTTCACTGAAGAGCCTTCTTCGTTCTGTGGCCATTTC
ACCAACAAGTGCTACTGGTTCTGTTGCCATTCCGCCGACAAGCACCACTG
GTTCCGccatgaatttcaaaattccgtcgttgacaaaattgtttacaatt
gggccttcctTTTCACATAGGAATCCAGATTCAGTAgatgaaattccaaa
aaaggCATACAAGACATTTCCGGAAAATGTAATGCAGCACGCGATACAAG
CCTGCATCAACAAAGAGCTTGGTATCAAGGAAGCAGCCCGGGTCTACAAC
CTGCCAAAATCTACTCTTCACAGACGAGTGACGGGTTTAACTCAATCCTC
GCAACCTGGCCGACGGACAATTCTAACAAAGAGAGAGGAGATTCACTACT
GGTCTAAATGCAATGGCAAGATGGCACATGCCCTACGGAAAAACTCAGCT
GCAGTTAATGGTAAAACGCTACCTTGATAAATCCGGGCAAAATTTGTTAT
TTCTGAAGGACAATTTACCGGGGGATGGATGGGCCAGGGGTTTCATCAGG
CGGAATAAGATAAAACAAACGAAGGTGAAAAGTGCACGATTTGCAGTAAC
CAACAAGGACCTTAAGGATTACTACAAGGAAGTCACAGATTCCCTGAAAG
ATATTCCACCCAGCCATATTTTCAACTACGGCGAAACCAACCTCACTGAC
CTGGGAAAAGAGGTAGTTTTGGTTCGCCGAGTCGCATCGAAGAGAATTGA
AAAATGCGTAGAGCACTCTAAGCAGAGCTACTCGATCATGTACTGTGGAA
ATGCCATTGGTCAGTATCTCCCACCGATGATAGTTTATAAAGCAGAAACC
TCTTGCCCCGAATGGGAACAAAACGGTGTTGAGGGAGCCCAATATGACGC
AACTGATACTGGTTGGTTTGATATGGTGACTTTTGAGACATGGTTTCATA
AGGTCCTTCTACCAAACATCGAAGGCAATGAGAATTCCTGCATAATCGGT
GACAATCTGCCATCTCATTTATCTTTGGAAGTGATTGAGGAATGCGAACG
AAGGAACATCTCCTTTATACTTCTTCCTCCAAACGCAACGCATTTGACGC
AGCCTCTCGACGTTGCTGTTTTCAAGGGCTTGGAGACAAAGTGGCGTGAT
GTAGTGAACCAGTGGAGAAAAACCGCACCTCCAGGAAACATTCCTAAGGC
AGAGTTCCCTGCCTTGGTGAAGAAAGTGCACGATCAGCTTGAACCTGATA
CACTAATCAGCGGATTCCGCTTGTGTGGGATCCACCCACTTGATGCAACT
CCTCTCCTACGAAAAGTTCCATCTTCGGAGGATGTTGAGCAACGTGAGAA
AGAAATTTTCGGCACCGTGTTCATGGAACAGGTTTTTGAAGTGCGTGATG
AAATGGTAGCCACAGGAATGAAAAAACGCTCACCCCcacgaaaacgaaaa
cgaaaacggTAAGCCAGTATCCTCTGATGTTGGGTGAAAGAAAGAAGAGC
AAGAGAAACAAAAAGCTGTTAAGTGATGAAAATTGGAAAGAAGCTAGTCA
AAACCTGGAAAACACGCAAAAGTTCGTTTGCTAATGGCTAGACCCTAAAG
AGATTGTAAAGGCCCTCAAAGTTTAATGTGTGAATCATCAGCTAATGCCA
AATGACGTCGTTCTACAGCAAGTGTTACTGTGTCCCAACCCCATAATGTG
TCTTCTGATGGTCCATCAGCCGCAAATCAAATTAATTCATCGACCGCTAA
TGTCACAGACCGTCATCTGTGTTACTGTGTCCCAAACCCAGGTCATGTCT
TCTGAGAGTCCAGCATCCATCGAAATGTCCGGAGTGTCGGTGGTCGGCAG
ACGTTCAAATTAGAAGGGGAAGTCGCAAGCGGAAAACAGTCCTaccaaat
tcaacaaagtaACCAAAGCAGTCCGAATGGTTTTGCAAAAGTTGCGGTCT
CAAATCGTCGTCCACATaactaaaggttcaatctcaaaatcagTGTCTTG
GATaattggaaatcttgcaatTCTGCTCTGACTTTGAGATTGCCCTTTTT
GTCATATAAAACCAGACTATTCCTTTACATGAAAAAGGGcaatctcaaag
atgaccaccacagtaaaactttaaattttgagatttaacctttagtcatg
tgttccctatgagaaaaaaaaaattcatgattttgattttgCCAATACGG
ACTTTTCTTGTTGCATTGAAATCTAATTTTACATTTCCTATTTACAACAA
AGGCatattttcatctttgtttCATTCAAACGCATATcttaagaaagttt
taaaaaagctTCCAGCCAGccgaaaatgccaaaaaccacggtttttgcag
attttcattggatttgttttttcacacaaaaacattgttgataacaatgc
tcaccatcaagcatgattcaattgtcaataaaaactgatttttgcaacca
gagctttctttttc
Run BLAST on NCBI

transcript from alignment at scaffold_171:69510..80875-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050431 ID=TCONS_00050431|Name=TCONS_00050431|organism=Clytia hemisphaerica|type=transcript|length=11366bp|location=Sequence derived from alignment at scaffold_171:69510..80875- (Clytia hemisphaerica)
CAAGCATGATTCAATTGTCAATAAAACTGATTTTTGCGACCAGAACTTCC
TATTAATTTTTTCCCTACAACCCTTCTCTCTCCCCCCATCAACAATCAAT
GATGAATTTATTGTGTTGTGTATTTTCGCTAAATGCTATATATTTTCTGA
CTGATTTTTTTTATTTTTCTTTTCGCATTGCTAACTAACTTTCATCATCA
GGTAGGTCCATTCAGCATGTTGCTTGTTTTACTTTTAAAAATAAACTTTG
CAATGCCATGTCGTTAGTGATATCTATTTTGTTTTTTACGTTTGTTTTAT
GTTTGGCAATTTCTTTTCTGTTTTTAAAAATATATATTTTACTTTATCTC
TTTTAAGAAACGGTTCCATCTTTACATTTTAAAAAATGGCCATTCCACCG
ACAAGCGCTACTGGTTCTTTCGACATACCGCTGACAAGCACTACTGGTTC
TGTCACCATTCCGCCAACGAGTGCTACTGTTTCTGTCACCATTCCGCAAA
CGAGCGCTACAGGTTCTGTCGCCATACAGCCGACTAGCACTACTGGTTCT
GTCGCCATGCCGCCGACTAGCACTACTAGTTCTGTTGCCATTCCACTGAC
AAGCACTACTGGTTCTGTCGCCATACCAGCTTTTACTTTATCTCTTTTAA
GAAACGGTTCTCTCTTTACATTTTACAAAAAGGCCATACCGTCGGCAAGC
GCTACTGGTTCAGTCGCCATTACACCGACGAGCACCACTGGTTCTGTCAC
CATACCGCCGACAAGCACCACTGGTTCTGTCGCCATTCCACCAACTAACG
CTACTGTTTCTGTCACCATTCCACCAACAAGCGCTACTGGTTCTGTCGCC
ATTCCGCCAACAAGCACTACTGGTTCTGTCACAATTCTGCCGACGAGCGC
TCCTTTCTCCGTCGTCATACCGCCGACGAGCACTACTGGTTCCGTCGCCA
TTCCGCCAACAAGCGCTACTTTTTCTGTCAGCATTCCGTCGACGAGGGCT
ACTGGTTCTGTCGCCATACCGCCAACAAGCACTACTGGTTCTGTTGTCAT
ACCGCCGACAAGCACTAATGGTTCTGTCGCCATTCCGCCAACGAGCGCTA
CTGTTTCTGTCACCATTCCACCAACAAGCGCTACTGGTTCTGTTGTCATA
CCGCCGACGAGCACTAATGGTTCTGTCGCCATTCCGCCGACGAGCACTAA
TGGTTCTGTCGCCATTCCGCCAACAAGCACTACTGGTTCTGTTACCATTC
CGCCAACGAGCGCTACAGGTTCTGTCGCCATTTCACTGAAGAGCCTTCTT
CGTTCTGTGGCCATTCCACCAACAAGCGCTACTGGTTCTGTTGTCATACT
GCCGACGAGCACTAATGGTTCTGTCGCCATACCGCCAACGAGCACTACTG
GTTCTTTCGACATTCCCCCGACGAGCACTAATGGTTCTGTCTTCATTTCG
CTGAGGAGCCTTCTTGGTTCTGTGGCCATTCCGCCGACGAGCGCTACTGG
TTCTGTCGCTATACCACCGACGAGCACTACCGGTTCTGTCGCTATACCGC
CAACGAGCACTACCGGTTCTGTTGCCATTCCACCTTCGAGTGCTACTGGT
TCTGTCGCCATTCCGCTGATGAGCACTACTGGTTCTGTCGCCATTTCACT
GAAGAGCCTTCTTCGTTCTGTGGCCATTTCACCAACAAGTGCTACTGGTT
CTGTTGCCATTCCGCCGACAAGCACCACTGGTTCCGCCATGAATTTCAAA
ATTCCGTCGTTGACAAAATTGTTTACAATTGGGCCTTCCTTTTCACATGT
GAGTACTGAAGTTGAGCCCATTGCTTTAGCACCTTACAGTTTGGAAACTT
TAATGAAAAGGATCGATTTGCTTCGTTAGGCCATTGCAGATTTTGTCTGT
TCTGTACTGTCAATGGCTCTAATATGGGACAGTTGGTCAAAAACATGGGA
TTGTTGATATCTGGCCTGTATTTTCACTTACTGTTTAAATATCTTTGACA
AAAAAATTTGTTTTGATACTTCAACCAAGTTTAACAATCAAACTTTCACC
ATCCCATAATCACAATCAAATGTATTTTAAAGCATTTTAAAAGTACGTAC
ATATTTTGAAGAAGTAATAACAACTTAATACACACTTGCTGCTCACATCT
TGACGCCATTATTTGTTGTTGTTTTTCTCTGGAGACACATTTTCCAGTGT
GCACTATTGATTGACATGTCAAAGTTACCGAGTGTCGATAACAGATCTCA
CAATTTTTCGCGGAAGAACAGACTTTTTTAATATCTGTGTTCGGACGCTT
GTGCAAATGTGCGTGATCACATTTACGTGTCTCTCGTCGCAAAGAGTTTT
TCCTTTTGAGGTGTGAAAGCCTACCTGGTAGGTGAGAGTAGCGTATTAAC
ATTATTTGCGAGCCATCTATAATTTGCGTTAATTAAATGACTTTGCAGAT
TCGGTGTAATGGTGACCTAATTGCCATCCCATGTTTTGTCAGATAGTCCC
AAGTTAGAGCCGTTGACAGTAACAGGGGGCAGACGACACAGGATTTCCAC
CAGGCCCGATCAATCAAATTTGTGTCGAACTAATTAAACTACATCAAACG
ATTAATCTAATCTAATGGAACACTTTTTGAAGCAATAGAGGTTCCATTAG
TACGGTCTGTCAGTAAAAAGTATGGTTGTTAAAAAAATAGCACTAACACG
ATCAGAAACAGTCAAAAACCAGCCTTTTCCAATTTTCATCGAGTTAAAGC
AATTTGTTCCTTTAATGTTTTGATCTGAAATTTTCAAGAAAAGTGGCCAA
CATATTTCCTTTGCTTTTTATGTCAACTGCGAGGTTGGACGGGGGTAACA
GAATTAAAGTTCCTGAGTAAAATCCTAACTATCACCCACCCAAAAAAATG
CCTTTTTTTTGCTAACATCTTTTAAATAAATACGCTGCCACTTTCCTATA
CGTTTTGTCCTTCAGAAAAATTATGTAATTTGTGCAGGTTTTTCAATAGA
GATGTCACGTAACTCGAATCCCGTGTCTTATTGGACTAGAGAAAGCGAAA
GTGAAATGGTGCGATCTGATTGGAAGAAAGATACCATGCGAACTAGAACA
AGAATAATTCTCATTCTGAAACATTAAAAGTTGACACAACACATTGACAA
ATAATCCCTGTTAGAAGTTTATATCAAAATCTCCAACAAAAATGAAAGTG
GTCTCTTTCTACCGATTGCTTCGTGGGGCTCCTTCGTGGACTATTTACCT
TATCGGCCCTTTTCGTGAAGTTTTGGATATAGATTAAAAAAATGGATAGT
TTTCATATCCTTTTTTCCTGCCTAAAATCCTCTAAATTGAGGAAAAATGG
TAAAAAATTAACGCCGCTTTTAGGTAAAGATTGCAAAATTTTGGCCCTTA
TTACGCCGACCCTTTTAACACCAGCCTTTAATACGCCACAAGCCCAAAAA
TAACGTAAATAAGGACCAATAAGGTATTTAATTTCCACCAATAAGATTGC
CGCATTTCACATGGTCACCTGTGGCCTTTCAGTGCCTTGCCGGGCAGGCG
GCTGTAAAAGTTGTGTGTCAACGGTACTTTCACAGTTGTGTATGTACTGC
ATCTACACTGTTGTGTGTAACACCTGCCTATCTTCTCAATAAGAGTATAC
AAATCAAGGTAATGAAATAATATGCTTCTTAACTTATTTCACTTTCACAT
TTGGGCAACTTTCTGATTAAGGGATCATCTATGATTGTCAAGAGCTTTAA
TTAAAAATGTTTCAACAGGTAGGACCATGAAAGAAATTATCTTTTTAATC
GCATTAACCTTATCTAAATTTTAGAGGAATCCAGATTCAGTAGATGAAAT
TCCAAAAAAGGCATACAAGACATTTCCGGAAAATGTAATGCAGCACGCGA
TACAAGCCTGCATCAACAAAGAGCTTGGTATCAAGGAAGCAGCCCGGGTC
TACAACCTGCCAAAATCTACTCTTCACAGACGAGTGACGGGTTTAACTCA
ATCCTCGCAACCTGGCCGACGGACAATTCTAACAAAGAGAGAGGAGGCAA
GGTACTCTCAAGTTTCTAATAAACGTACAGTAACGAATAAACATATAGTG
TTGAAAATGAAGGCATAAAAATCTGATTAAAGGGTCTTTTCAGGTTTAGG
TAAGAGGGTAAATAATGGGTATTCTGCTTTCTATTTTCCATAGTCAAAGA
AGGGTATTTAGCCTCAGAAACACAAGTAGGCACTTGAAATTGAGGAAAAT
CTTTGTCGAAATTAATAGTACGTTTATTAAGCACTGGAGAGTAAGCATGA
AAAAATATTTTGGATTATGTTAATGAAAGAGGAAGGTTTTTTCACTGGTG
ATTTATTTCGTCATAAAACACCCAGGTTGATGGGCAACGGTTGAAAGTTT
GCCATTAGTTATTAGTATATACTTTTTTAATCCCTGGGCTGCTGCAAGAT
TTCCTCTCAAGGCGTTTTGAAGTAAATGCTTTGCAGAACTTTTGTAGCTA
CCATTTAGAATAAAGATTTTCAGTGTTTTCTTCCCAAAAAAATGTCAATG
GGTTAATCATTTTTTTAGATTCACTACTGGTCTAAATGCAATGGCAAGAT
GGCACATGCCCTACGGAAAAACTCAGCTGCAGTTAATGGTAAAACGCTAC
CTTGATAAATCCGGGCAAAATTTGTTATTTCTGAAGGACAATTTACCGGG
GGATGGATGGGCCAGGGGTTTCATCAGGCGGAATAAGATAAAACAAACGA
AGGTGAAAAGTGCACGATTTGCAGTAACCAACAAGGACCTTAAGGTTAGT
TGTAAATAATACTATTATAACAAAGAACAAACGTATCTCAAAGCTACGTT
ATATAAATGTTATGGACAACAACAACATATCTATGGATGACAGGAAAATT
TCTACCTTGAAAAGGGTGAGTCAGGGCGTGTCTAGATTTAAAAAAATCAG
AAATCCCAAATTTACAATCAATAGCACCCATTCTCAGGGATTCACTTATG
GATTTTTAGTTGACCTATACCTTAAGGTTTCACAATCCAGTTGTGACGTA
ATTAAATAATAACCTAAAAATTAATTATTAGGGAAAGTGTGAATTATGAC
GTCATCAAATAATGACATCATAAATCGTAAAATAGCTAACTCTATAATCA
TGGTGGGCACACCAGGGGGGTTGAGAATTTTACTGAATTTAAAAGAAGAG
GTTGCTTGTGAAAATTTCAAATAAAAGGGGTGGCTTGGACAAAAAGATAG
GGGTTAATCTTTTAAGGGGGGCTTTTAGAAGATTTGGCAATTTGCAAAGA
GTGTTTTCCATTCATTTTTTGACTAGCTACCTAGATTGGTATCTTGAATA
TCTTACTGTATCTGTTAAAAAGTAATTTCTGCCATTAGATTCATATTATT
GTATTCTTCATTTTGATAACCTTGGAATATAGTTAGAGATTGTAAAAAAG
TTTGTACGTAAAAGGTCGAAAAAAGAGGGGGGTGCCATTTTTAAGGGGAA
TTGATACCCCCTTTGCCCACTATGAATGTTATAAGTACATGCCGAATCTT
TGTCAAATTTGGACCAAAGATGCATCTTAATGATGCCTAACTTTCCGAGT
AAAATTTCTTTCGAAAATTTAGATGGGCTTAGCATATAATGTAAAAAATC
AAGAAATCCAATTTTTTGCTAACGTCATCAAATTTTTAAATTTTTTTTTT
CAAAAAGTGTTACATTTTAGTTAGATCTATCTTTGGTTCAAATTTGGAAA
AGATTGGACATGTATTTTTAATATTATAGCGATTATATGATTCATGACGT
CGCCAAATTCGATCAAATTATGACGTCACGGGATAACAATTTCTTTTATT
ACAGACTTTTGGGGTGATATTTTAATTAGGTCACAAACTGATTCATAAAT
TTAAGGCATAGAGGTAATTTAGAGCCCTAATAAGTGGGTCTCTGAATCTG
GCTGCTATTGGTCGCAAAAACTTAGGGTAAACTGTTAGGTTTTCGAGACT
TGCCCTATAGTCACTCAAGGCACAAAGTTATAACACTTTAGGTTCATAGC
ATCCTATTTGTCCTCAAATTTTGGCTTAACAATGGTTTTAAACGTTTTGC
TTTTAAAAAGAGTGTACTAATTTAAGGCTAACCTGAAATTAAATCTTTAT
CTATCACAGGATTACTACAAGGAAGTCACAGATTCCCTGAAAGATATTCC
ACCCAGCCATATTTTCAACTACGGCGAAACCAACCTCACTGACCTGGGAA
AAGAGGTAGTTTTGGTTCGCCGAGTCGCATCGAAGAGAATTGAAAAATGC
GTAGAGCACTCTAAGCAGAGCTACTCGTAAGTAAACTGTGAATCTTTAAT
ATTAGATTTATAATGATTATACAATACTACCCTTTGTCTCAGTACCCATG
TGGAATTGATTATTTTGGCTGAACAACCAGGTGAGATCGTCACATTTCTT
ACAATTGGGATGAAAATTTTTATCGAAATTTCAATGGGGATAAAAAATAT
ATTGCTTCCAGCTCAAAAACGCCAGTGCTGGGGATGGTTTGAGAGTGCTG
TTTTTTCTTGCTGAATTTTCCACCAGAGACGTTTTTTTGCCAATCTTTTT
AGTGGGGGGGGGGAGCTCACTTAACTTGCTCTGTGACATGGGGGTGTACT
ATCGGAACTTCTATTGGTGAGAACTAATTTTGTAAAGTTACAGGCTGAAA
CTGTTCTATGTTGCCTCATTCTGAGCAATATTGATGATTTTTAGGGGCTA
TTTCGTCAAAATACAAAAAGATAATTAGATTTCATCTTGACTTATTTTGG
TGAATTTTAAGGAAACTCAAAAAAATGCGCCCAAGTTAGTTTGTGCTCAA
AATAAGTTCCTTTAAAGTAGTAGTTCTTTCCTCTTAAATTTCCGGGTTAA
ACTTGCAGCTTCTTTCTGCCAATCACAGTGCTCAAAAGTCCAAATTGGGA
TAAAGTTAAAAAAGAGTCACCAACCTCAGAAAGAACCTTTACAGAGTTTG
CGTTGTATCTGGGTCTGCTCTGTGATAAAGCCGAAATTATAGAATCCTGA
AACTCGATATCTTTTAGGATCATGTACTGTGGAAATGCCATTGGTCAGTA
TCTCCCACCGATGATAGTTTATAAAGCAGAAACCTCTTGCCCCGAATGGG
AACAAAACGGTGTTGAGGGAGCCCAATATGACGCAACTGATACTGGTTGG
TTTGATATGGTGACTTTTGAGACATGGTTTCATAAGGTACAAACATTATT
ATATGTGATAACTCGCGAGGTAATATCTCTTAATGTTTTATACGTATCCG
TTCTGTTTCATGTATCCTCCAGCAAAATTACCAGTATCCGAAAACATCCA
TATTCCAATAGACTCTAAAAAATGTAGCTGTAGTATCATAACCTATTCAC
GTTGTCCTACTGAATATTACTTATTGTTTGTTGTAAATAAAGTAAATCCA
ATGAATGACTCTATCTCATACAGGTCCTTCTACCAAACATCGAAGGCAAT
GAGAATTCCTGCATAATCGGTGACAATCTGCCATCTCATTTATCTTTGGA
AGTGATTGAGGTAACTGTCTTTTTGGACCTACCCCGGTGGGGTGGAGGTC
CTATAAATTAACCCATGTTCGTTAGTTAGTTCGTTCGTTCGTTAGTTACC
AACTTTTCTCGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAATGATGTAAAATGGCAATGCCC
AAAATTATACATTACTTCCATTAAATTCTAATTATTCGTTTTATAAATAG
GTAGGTCCATTAAAGTATTACTTGTTATTTCAGTATTTCACGATCTATGT
AATTTTATACGCTCTACCTTATTTCCTCCATACACGACAGCCTTCCCTAA
CTAAGGTGTTTTCATAAAGGGCTAAATTTTACTTTTTATTCAGCTGTTGT
CTTTATTGGAAGAGATAATGTTCTATCCAGCTGGCACACAACGTTATTTC
AATGTCCACCCGACGTTATTTGGATGTCAGATGGACGTTTAAACAACATT
TTGGGCCAGCTACTAGGTAGCCATAATTGGTTTACAAGGAATGTATCCCC
TAGCACTGAAATAATGAAAACTTTTGCTTTCAAATTTACTCTAGTTAGCT
AACCCATTACTTCATAGGAATGCGAACGAAGGAACATCTCCTTTATACTT
CTTCCTCCAAACGCAACGCATTTGACGCAGCCTCTCGACGTTGCTGTTTT
CAAGGGCTTGGAGACAAAGTGGCGTGATGTAGTGAACCAGTGGAGAAAAA
CCGTGAGTACAGTACTTATTGGAATAGTGTGTGTTTTAACAGTCGTGAAT
TTGTTTACCTAATCTTTCAGTATTGCAAACCCAAGAAGATATCTACAAAA
CGGACATTTAATAACCGAAGTAACTCTTTTCTTTTAGGCACCTCCAGGAA
ACATTCCTAAGGCAGAGTTCCCTGCCTTGGTGAAGAAAGTGCACGATCAG
CTTGAACCTGATACACTAATCAGCGGATTCCGCTTGTGTGGGATCCACCC
ACTTGATGCAACTCCTCTCCTACGAAAAGTTCCATCTTCGGTATGTGTTC
CATTTGTAACCATGTATCGCATTCACCCATCATAGTCAATGGATGACAAA
AGAAAATAGGCTTTTGATTATAGCTATCATCAGTAGTTGTAAGACAAAGA
CAACTTTAGCTCCCAAATAGCTATCACTCGCGAGCTATTTCAAGCTTAAC
TTTTCACACTAGACCTAAATGTTATTTAACAATAAATGGTACTATAAATC
TAGTTTTACGCATATGATGTGTAGAATTAAAAGATGACAAAACAATTAAA
ACTTTTATGACTGATTTCTCATACTTCAGGAGGATGTTGAGCAACGTGAG
AAAGAAATTTTCGGCACCGTGTTCATGGAACAGGTTTTTGAAGTGCGTGA
TGAAATGGTAGCCACAGGAATGAAAAAACGCTCACCCCCACGAAAACGAA
AACGAAAACGGTAAGCCAGTATCCTCTGATGTTGGGTGAAAGAAAGAAGA
GCAAGAGAAACAAAAAGCTGTTAAGTGATGAAAATTGGAAAGAAGCTAGT
CAAAACCTGGAAAACACGCAAAAGTTCGTTTGCTAATGGCTAGACCCTAA
AGAGATTGTAAAGGCCCTCAAAGTTTAATGTGTGAATCATCAGCTAATGC
CAAATGACGTCGTTCTACAGCAAGTGTTACTGTGTCCCAACCCCATAATG
TGTCTTCTGATGGTCCATCAGCCGCAAATCAAATTAATTCATCGACCGCT
AATGTCACAGACCGTCATCTGTGTTACTGTGTCCCAAACCCAGGTCATGT
CTTCTGAGAGTCCAGCATCCATCGAAATGTCCGGAGTGTCGGTGGTCGGC
AGACGTTCAAATTAGAAGGGGAAGTCGCAAGCGGAAAACAGTCCTACCAA
ATTCAACAAAGTAACCAAAGCAGTCCGAATGGTTTTGCAAAAGTTGCGGT
CTCAAATCGTCGTCCACATAACTAAAGGTTCAATCTCAAAATCAGTGTCT
TGGATAATTGGAAATCTTGCAATTCTGCTCTGACTTTGAGATTGCCCTTT
TTGTCATATAAAACCAGACTATTCCTTTACATGAAAAAGGGCAATCTCAA
AGATGACCACCACAGTAAAACTTTAAATTTTGAGATTTAACCTTTAGTCA
TGTGTTCCCTATGAGAAAAAAAAAATTCATGATTTTGATTTTGCCAATAC
GGACTTTTCTTGTTGCATTGAAATCTAATTTTACATTTCCTATTTACAAC
AAAGGCATATTTTCATCTTTGTTTCATTCAAACGCATATCTTAAGAAAGT
TTTAAAAAAGCTTCCAGCCAGCCGAAAATGCCAAAAACCACGGTTTTTGC
AGATTTTCATTGGATTTGTTTTTTCACACAAAAACATTGTTGATAACAAT
GCTCACCATCAAGCATGATTCAATTGTCAATAAAAACTGATTTTTGCAAC
CAGAGCTTTCTTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031935XLOC_031935Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050431-exon-scaffold_171-1575043694:79938..80875TCONS_00050431-exon-scaffold_171-1575043694:79938..80875Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1575043694:79078..79607TCONS_00050431-exon-scaffold_171-1575043694:79078..79607Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1575043694:76830..77051TCONS_00050431-exon-scaffold_171-1575043694:76830..77051Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1575043694:76082..76307TCONS_00050431-exon-scaffold_171-1575043694:76082..76307Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1575043694:74550..74716TCONS_00050431-exon-scaffold_171-1575043694:74550..74716Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1575043694:73640..73808TCONS_00050431-exon-scaffold_171-1575043694:73640..73808Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1575043694:73316..73402TCONS_00050431-exon-scaffold_171-1575043694:73316..73402Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1575043694:71224..71358TCONS_00050431-exon-scaffold_171-1575043694:71224..71358Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1575043694:70936..71088TCONS_00050431-exon-scaffold_171-1575043694:70936..71088Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1575043694:69510..70646TCONS_00050431-exon-scaffold_171-1575043694:69510..70646Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1510915933:79938..80875TCONS_00050431-exon-scaffold_171-1510915933:79938..80875Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1510915933:79078..79607TCONS_00050431-exon-scaffold_171-1510915933:79078..79607Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1510915933:76830..77051TCONS_00050431-exon-scaffold_171-1510915933:76830..77051Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1510915933:76082..76307TCONS_00050431-exon-scaffold_171-1510915933:76082..76307Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1510915933:74550..74716TCONS_00050431-exon-scaffold_171-1510915933:74550..74716Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1510915933:73640..73808TCONS_00050431-exon-scaffold_171-1510915933:73640..73808Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1510915933:73316..73402TCONS_00050431-exon-scaffold_171-1510915933:73316..73402Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1510915933:71224..71358TCONS_00050431-exon-scaffold_171-1510915933:71224..71358Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1510915933:70936..71088TCONS_00050431-exon-scaffold_171-1510915933:70936..71088Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1510915933:69510..70646TCONS_00050431-exon-scaffold_171-1510915933:69510..70646Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1491911889:79938..80875TCONS_00050431-exon-scaffold_171-1491911889:79938..80875Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1491911889:79078..79607TCONS_00050431-exon-scaffold_171-1491911889:79078..79607Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1491911889:76830..77051TCONS_00050431-exon-scaffold_171-1491911889:76830..77051Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1491911889:76082..76307TCONS_00050431-exon-scaffold_171-1491911889:76082..76307Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1491911889:74550..74716TCONS_00050431-exon-scaffold_171-1491911889:74550..74716Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1491911889:73640..73808TCONS_00050431-exon-scaffold_171-1491911889:73640..73808Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1491911889:73316..73402TCONS_00050431-exon-scaffold_171-1491911889:73316..73402Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1491911889:71224..71358TCONS_00050431-exon-scaffold_171-1491911889:71224..71358Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1491911889:70936..71088TCONS_00050431-exon-scaffold_171-1491911889:70936..71088Clytia hemisphaericaexon
TCONS_00050431-exon-scaffold_171-1491911889:69510..70646TCONS_00050431-exon-scaffold_171-1491911889:69510..70646Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_171supercontigscaffold_171:69510..80875 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.00207963	3.25198e-08	0.475527	0.404245	0	0.684035	1.40909	0.862335	0.938824	2.03122	0.364839	0.354847	0.483267	0.255813	0.487365	0.27175	0.284955	1.58423e-08	0	0.368949	4.25044e-07	0	0	0.497234	0	6.87951e-06	1.41201e-06	1.40326	0.236906
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050431 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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