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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050412 ID=TCONS_00050412|Name=TCONS_00050412|organism=Clytia hemisphaerica|type=transcript|length=645bp
gccagatatcaacaatcccATGTTTTTGACCAACTGTCCCATATTAGAGC
CATTGACAGTACAGAACAGACAAAATCTGCAATGGCCTAACGAAGCAAAT
CGATCCTTTTCATTAAAGTTTCCAAACTGTAAGGTGCTAAAGCaatgggc
tcaacttcagtactCACATGTGAAAaggaaggcccaattgtaaacaattt
tgtcaacgacggaattttgaaattcatggCGGAACCAGTGGTGCTTGTCG
GCGGAATGGCAACAGAACCAGTAGCACTTGTTGGTGAAATGGCCACAGAA
CGAAGAAGGCTCTTCAGTGAAATGGCGACAGAACCAGTAGTGCTCATCAG
CGGAATGGCGACAGAACCAGTAGCACTCGAAGGTGGAATGGCAACAGAAC
CGGTAGTGCTCGTTGGCGGTATAGCGACAGAACCGGTAGTGCTCGTCGGT
GGTATAGCGACAGAACCAGTAGCGCTCGTCGGCGGAATGGCCACAGAACC
AAGAAGGCTCCTCAGCGAAATGAAGACAGAACCATTAGTGCTCGTCGGGG
GAATGTCGAAAGAACCAGTAGTGCTCGTTGGCGGTATGGCGACAGAACCA
GTAGCGCTCGTTGGCGGAATGGCGACAGAACCATTAGTGCTTGTC Run BLAST on NCBI transcript from alignment at scaffold_171:78911..79819+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050412 ID=TCONS_00050412|Name=TCONS_00050412|organism=Clytia hemisphaerica|type=transcript|length=909bp|location=Sequence derived from alignment at scaffold_171:78911..79819+ (Clytia hemisphaerica)
gccagatatcaacaatcccATGTTTTTGACCAACTGTCCCATATTAGAGC
CATTGACAGTACAGAACAGACAAAATCTGCAATGGCCTAACGAAGCAAAT
CGATCCTTTTCATTAAAGTTTCCAAACTGTAAGGTGCTAAAGCaatgggc
tcaacttcagtactCACATGTGAAAaggaaggcccaattgtaaacaattt
tgtcaacgacggaattttgaaattcatggCGGAACCAGTGGTGCTTGTCG
GCGGAATGGCAACAGAACCAGTAGCACTTGTTGGTGAAATGGCCACAGAA
CGAAGAAGGCTCTTCAGTGAAATGGCGACAGAACCAGTAGTGCTCATCAG
CGGAATGGCGACAGAACCAGTAGCACTCGAAGGTGGAATGGCAACAGAAC
CGGTAGTGCTCGTTGGCGGTATAGCGACAGAACCGGTAGTGCTCGTCGGT
GGTATAGCGACAGAACCAGTAGCGCTCGTCGGCGGAATGGCCACAGAACC
AAGAAGGCTCCTCAGCGAAATGAAGACAGAACCATTAGTGCTCGTCGGGG
GAATGTCGAAAGAACCAGTAGTGCTCGTTGGCGGTATGGCGACAGAACCA
TTAGTGCTCGTCGGCAGTATGACAACAGAACCAGTAGCGCTTGTTGGTGG
AATGGCCACAGAACGAAGAAGGCTCTTCAGTGAAATGGCGACAGAACCTG
TAGCGCTCGTTGGCGGAATGGTAACAGAACCAGTAGTGCTTGTTGGCGGA
ATGGCGACAGAACCATTAGTGCTCGTCGGCGGAATGGCGACAGAACCATT
AGTGCTCGTCGGCGGTATGACAACAGAACCAGTAGCGCTTGTTGGTGGAA
TGGTGACAGAAACAGTAGCGCTCGTTGGCGGAATGGCGACAGAACCATTA
GTGCTTGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050412-exon-scaffold_171-1491911889:78911..79509 | TCONS_00050412-exon-scaffold_171-1491911889:78911..79509 | Clytia hemisphaerica | exon |
| TCONS_00050412-exon-scaffold_171-1510915933:78911..79509 | TCONS_00050412-exon-scaffold_171-1510915933:78911..79509 | Clytia hemisphaerica | exon |
| TCONS_00050412-exon-scaffold_171-1575043694:78911..79509 | TCONS_00050412-exon-scaffold_171-1575043694:78911..79509 | Clytia hemisphaerica | exon |
| TCONS_00050412-exon-scaffold_171-1491911889:79774..79819 | TCONS_00050412-exon-scaffold_171-1491911889:79774..79819 | Clytia hemisphaerica | exon |
| TCONS_00050412-exon-scaffold_171-1510915933:79774..79819 | TCONS_00050412-exon-scaffold_171-1510915933:79774..79819 | Clytia hemisphaerica | exon |
| TCONS_00050412-exon-scaffold_171-1575043694:79774..79819 | TCONS_00050412-exon-scaffold_171-1575043694:79774..79819 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_171 | supercontig | scaffold_171:78911..79819 + |
Blast
The following BLAST results are available for this feature:
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