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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050356 ID=TCONS_00050356|Name=TCONS_00050356|organism=Clytia hemisphaerica|type=transcript|length=1075bp
ctttttcaaatttccaacgggacttattttcgcggatgacacccaaatcc
gcgaaatccgcgaaaattaatccccgcgaaaatttatcccattaaagtat
ttctATCAGACACACTGCACTCCCTTCAAGTTTTTAATCCTATTTTCGAT
TTATACTGTATTTAAATATTAGTAAAATTGATAATAGTAGTATAGTATCG
TTTTCTAATAATAATCTATTCAGCTGcataaaatataatattataaCCGT
CCATTTGTTCATTCGTTTATTCATGAAATAAGAAATCAAACTAAGGGGTT
GTAAATATGAATACTGGCGAAGACGTCGTTTAAAGTTAAGGTTTCAATCC
CAAACTAAGGTTCCAATGCCACTCTCCAGCGGAAAGGGACTTGGACTCCA
GctaattgaaaaaatgaagtgCAGAGAGTAAGCCAGTCAACACAAGTTAT
TTTCCATACTAGTTCTTGGTGCCCTATCTAGGAAAATGACCAAAGAATGA
GTTACCTACAAATCATTGGTCCCTTCAACCGGAGAGAATATTTACTCGAA
AAATTTGATTACGTACATGGGAAAAAACATTATGTTTTGTTGATCTTATT
TATTATCCTATCAATTGCATtgcaaataaaacttttctgtttagaatttt
ttctaaaaaataacgATAAAGCtacataaaaaatcaaaaaagagacaaaa
attgttttttaattattctaAAAAGACGGCgaagcaaacaaaatttcttt
caaaaaatggcCTTCTTTTGCAAAACATTGAGCACTTATTTACATACATt
cgatattttgacaaaaaaagttttttgacctATAAAATTAGCAACATCTG
TGATGGACCACCTAAAAGCACTACCTACAAAGCTTGTGATCCAATCACTG
TGAGGAGGTAGCATCACCCGTTTCGGATGACGTTTCTTCTGAAGATTTCC
CCGATTCGGTATTCCCAGTTTCCTCGGANgaagttttcctcttcgtcggt
aaactcgctataaaatcgcttaaatttcctcattcgccgtaccagatata
aaaagcttccgtcgtgcctgaaACC Run BLAST on NCBI transcript from alignment at scaffold_169:122340..123414 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050356 ID=TCONS_00050356|Name=TCONS_00050356|organism=Clytia hemisphaerica|type=transcript|length=1075bp|location=Sequence derived from alignment at scaffold_169:122340..123414 (Clytia hemisphaerica)
GGTttcaggcacgacggaagctttttatatctggtacggcgaatgaggaa
atttaagcgattttatagcgagtttaccgacgaagaggaaaacttcNTCC
GAGGAAACTGGGAATACCGAATCGGGGAAATCTTCAGAAGAAACGTCATC
CGAAACGGGTGATGCTACCTCCTCACAGTGATTGGATCACAAGCTTTGTA
GGTAGTGCTTTTAGGTGGTCCATCACAGATGTTGCTAATTTTATaggtca
aaaaactttttttgtcaaaatatcgaATGTATGTAAATAAGTGCTCAATG
TTTTGCAAAAGAAGgccattttttgaaagaaattttgtttgcttcGCCGT
CTTTTtagaataattaaaaaacaatttttgtctcttttttgattttttat
gtaGCTTTATcgttattttttagaaaaaattctaaacagaaaagttttat
ttgcaATGCAATTGATAGGATAATAAATAAGATCAACAAAACATAATGTT
TTTTCCCATGTACGTAATCAAATTTTTCGAGTAAATATTCTCTCCGGTTG
AAGGGACCAATGATTTGTAGGTAACTCATTCTTTGGTCATTTTCCTAGAT
AGGGCACCAAGAACTAGTATGGAAAATAACTTGTGTTGACTGGCTTACTC
TCTGcacttcattttttcaattagCTGGAGTCCAAGTCCCTTTCCGCTGG
AGAGTGGCATTGGAACCTTAGTTTGGGATTGAAACCTTAACTTTAAACGA
CGTCTTCGCCAGTATTCATATTTACAACCCCTTAGTTTGATTTCTTATTT
CATGAATAAACGAATGAACAAATGGACGGttataatattatattttatgC
AGCTGAATAGATTATTATTAGAAAACGATACTATACTACTATTATCAATT
TTACTAATATTTAAATACAGTATAAATCGAAAATAGGATTAAAAACTTGA
AGGGAGTGCAGTGTGTCTGATagaaatactttaatgggataaattttcgc
ggggattaattttcgcggatttcgcggatttgggtgtcatccgcgaaaat
aagtcccgttggaaatttgaaaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050356-exon-scaffold_169-1491911889:122340..123414 | TCONS_00050356-exon-scaffold_169-1491911889:122340..123414 | Clytia hemisphaerica | exon |
| TCONS_00050356-exon-scaffold_169-1510915933:122340..123414 | TCONS_00050356-exon-scaffold_169-1510915933:122340..123414 | Clytia hemisphaerica | exon |
| TCONS_00050356-exon-scaffold_169-1575043694:122340..123414 | TCONS_00050356-exon-scaffold_169-1575043694:122340..123414 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_169 | supercontig | scaffold_169:122340..123414 . |
Blast
The following BLAST results are available for this feature:
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