TCONS_00050344 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050344
Unique NameTCONS_00050344
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2062

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050344 ID=TCONS_00050344|Name=TCONS_00050344|organism=Clytia hemisphaerica|type=transcript|length=2062bp
TTTTTAAGTGAgatgtgtagacgataggaccGTCTAATTTACATACTTAC
TTTCATTCggaataaaatatttctaaccATAAATTATATCATTACTTACA
TTAGAGCGGTtctgaaaaaaacaatgaactcTTCAGTAAACTTTCTAATT
TCGGTTAAAATATATCTGAAAAGAAACACAGATGGgcgtcatcaaaataa
tattgacGCAAAACATATATTTGCTAACTGacgtcaaaatttatttttat
caagTTGACGTCagatatatttttgtttttcactttcatttcttTGATAA
ATGGACGTCTTACCAGAGAATTCTACCTGGAACGCCGGGTTTCGCTCAAC
AACACCAACAAGAATTGTTACAATTGATCCGGAAACTCCAGATTCGATGG
ATTACACTATGGAAAACACGGGTCCTTCGACTCGAAGACAAAGTATTGTT
GATGACCCTTTTGAAAAGTACCGGCGCACTGAACGTCAGCCATCATTGGT
TAAAGCAGCTCGCCAGTTCCAAGATAACATTCGCTCGCGAGCTGATTCAA
AATTGCGTGCAGCCTCAGACAGGAATGGTAATTTGGAGCGAGAATTGACC
GCTTTACAATCCAAAATGGATCAAAAGATGGGTGAATTAGAGGGTTTACA
AGAGATGTCAGATCAGACAGCTAAGCCAGCTGCCCACATCTTGGAAACCG
TTATGGGAGAGCTGGAACAGCGAAATTTGGAACTTTCCTCATTGTTGAAG
CAATCTGAGAGAAGTCGTGTCGAGATGGAAGACGTTCTAAAAGAACAAAA
TGAAGAACTGACAACATTACGTGCGAACACTTTGATTATGAAAACTTTGG
AAGAAGAGGTTACTTTATTGACTTCAAAGAAAGATGATCTTAACGAGCGC
GTCAGTGATCTCGAAACCGAGCTTCACGAGCGTCAATTGCATGAGCAAAT
GTTGAATCAAAAGTTGAGTGACTGTGAACACGAGAGACAAAGCATGGAGC
AAGACAATGCTTCTAGACGAACAGAGATGGGCTCCAAATTATCATATGCG
CAACAacaaataaaagagaaagaaCTCTTGGTTGAAAATACTGAGATTAC
GGTGAAAGAGTTATTTGAGAAGTGTAATCAACTCGGAACAAGTAACTCGG
AAGTCAAACAAGAGTTACTTNGTTATTCGAGAAGTGTAATCAACTCGGAA
CAAGTAACTCGGAAGTGAAACAAGAGTTACTGCATTGTTTGGAGTCTGGC
AAACGACTAAAAGACCTCAACACAAAATTACATTTCTGTAAAGATTATTT
GGAACAACAGGTTGACCAATTGATTAAAGATTTGAAAGCATCACGCGGTA
CGAACGAACAACTTAAACTGGAAATGTCCAATGGTAATCGAGAACGACAA
AACTATCACAAACAAGTCCTCCTCCTCGAAGAACAaCACAAACAGACAGT
GAGTgagatgcatatcatgaaagAAAAACTGTCTTCAGTTGAAAAACAAT
TACACGAATACGAGTCGGGATCGATTCGAAGCGCATGCGTCATCGCTGAg
ataaataaagagaaagatAGTAAAGAACTCTTGAAATTATCACTCGAAAA
ACAAGTTCGTGATTTGGAGGGCGAACTGAAgttaaaagaagaagaattga
GGGCTTCCGAGATGTTCGGAAGAAAGTTAAAATCAGATCTTGTTCAATGT
CATGCGAAAGTGgAATACTACCAAGAAAGTTTTATCGAGAAGCAGGAGTT
ACAAAAACTGAGAGCTGACCTCGAAATTAAGTACAAACTTGACTTGAACA
CACAACTGCAACGAGTTGGCGATATGTTCGAAAAAGAGCAAAATGAATTG
ATTGAAACGATGAAGACGTCTTTGAACGCGAGAAGTGAACCAGAGATGTA
TCATACTGCTGTCACTCCTGAAGCTCTCCGTCTCAGGGATTTCTATCGTG
CTCACACTTAAATTTTAACCCTCCtccacttttctttttttcttccattt
tctaTTTATTGTTACACTTCTTTCTTATACtcataataaaataataaaaa
acaaaacggCAT
Run BLAST on NCBI

transcript from alignment at scaffold_169:163500..176142-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050344 ID=TCONS_00050344|Name=TCONS_00050344|organism=Clytia hemisphaerica|type=transcript|length=12643bp|location=Sequence derived from alignment at scaffold_169:163500..176142- (Clytia hemisphaerica)
TTTTTAAGTGAGATGTGTAGACGATAGGACCGTCTAATTTACATACTTAC TTTCATTCGGAATAAAATATTTCTAACCATAAATTATATCATTACTTACA TTAGAGCGGTTCTGAAAAAAACAATGAACTCTTCAGTAAACTTTCTAATT TCGGTTAAAATATATCTGAAAAGAAACACAGATGGGCGTCATCAAAATAA TATTGACGCAAAACATATATTTGCTAACTGACGTCAAAATTTATTTTTAT CAAGTTGACGTCAGATATATTTTTGTTTTTCACTTTCATTTCTTTGATAA ATGGACGTCTTACCAGAGAATTCTACCTGGAACGCCGGGTTTCGCTCAAC AACACCAACAAGAATTGTTACAATTGATCCGGAAACTCCAGATTCGATGG ATTACACTATGGAAAACACGGGTCCTTCGACTCGAAGACAAAGTATTGTT GATGACCCTTTTGAAAAGGTAACTAACGCTCTCCTTTATTACTTCTTTTG TTTTATATGTTGTTGTTTTTTTTCAAAACGGGGCTGACTCTTGCTAACAA TTAGATAACTCCGGAGAATTTCCCGGTATGCTTAAAACAAATCTAAGGTT TATTGTCAATAAAGTATAGTCAAAGGGTGGAAGTGAAACTTTTACCAGAC AAGATATAGTGATGCCTTAAGATTTGCACAGCATTTCAAACAATTGAATC TAGTGTTTCCTTATTTTTTGTCGTGGAACATTCTTTGAAATCTATCAATA AATGTTACTTTCAACCAAGCGTTTGTATAAAACCACGTAGGGCCGTGCAA CTTACATAGGATATAAGTTGGTTCATTCTACACTTTTCCATGTTAAATAA GTAGCACATACTCAAAATAACATGATAAATTTCATTCAGTTTTCTTTCTT TATCGTATTACCTAGGCTTCTTTAAGATTGTATCATTAACGACTCCACTT AGCGTAGCTGCTTAAGGACTCTAACACTTAGTGAGAATTGAAAAGTTATT TGTTTTTTAGCCTTCCAAACGCAGTAACACAATAAGACTACCGTGGGTAT CACGAAACGAATACAAAAAGATTCCGTTTGAAGGAAACTCATTCCACAAA TATTTATAGGTCTCGGAAGAATTGTAAAATATTAGATATATGTAATGATA CAATATGCTCTTCATTTTCTGTTCTTTGAAAAGTGATGTGATTGAGACTT GCAGGATAAAAGTCCGTCCTTAAGGCCCTTAAAATTAATTTCAGAGAAAG CTAAAACTATGTAATGCTCACGGCAGTCGGGAACACTATATGGAAAAGGC AACTATTGCCTTAACGGGAAATATTTCCCAAACGGGAAGGTGGAAAATTT CCCGAAATGGCTCGACTTTCCAAACCGGGAAGTTCACCAGTTTCCCGATC GGGAAAGTGGCTTCTGAGCACTCCGTAAATGCCTGTGGAAAGTTAAGAAC TTGCCCCACTTGTAAAGGAGGGAAAATAATTAATATTCACCAGGTAGTTA AGAAATCCACCAGGTAGTTAAGAAATCCACCGGGTAATCGCTTCTTAATT CTACTTTTCCCATTCCCAATTAAAAACTTCCCTATTTGGAAACTTTTTCT CGATCGGGAAACAAAAATCTGCTTTGTTTACAAAAATTATATTTCCAGTT CGGGAACGATGAAAGTTCTTGACTAAAACGGGAAACAGAAAAGCGATGAA ATTTTCAATCTGGAAATAGTTTCCTTTTCGGGTTTTCACCATCCCGTTCG GAAAATATATCCTTGAAATAGTTGCCTTTTTCATGTAGTGGTACTGACTG CACGGCTGAACTGATACATAGGATTTGAAGCCACCTTTTCCCTGCATATG TTGAACGGCCCACAAAACCTTTATACAAACGCTAGATTGTATGCATAATT ATATGGTTGATTACATTTAGCTTAGATTTGTTAAGGACGAGCGGGGCGAT AAATCCGTAATAGCCCCGCTTTTTTGTAATCGCCCTGATGTAAACAAAAA TTTCTCACTACGTTCGGGCTATTTTGAAATGTTTTCAATGAACCTCGGGG TTATTAATCCCAAATTACCCTCTAAACCATGTTATTACTAGAATATTCAT AAAACGTACCGCGCGAAAACAAACGGATGTCTTGTCCGAGTTGGCGCGCA AATCTTAAAGCATCACATTCACTATACTACAACTTCTTTTAACTTATAAT ATGCCTTTACCATGTCCTCCTAATTTTGTATTTAGTCGCCTAGCATTTTA GACTTATATCTATCTCTGATGCGGAATGTTGACAACTCTTGTGGCATGAG AATGCATTTCTTATAAGTTAAGACTTTGTAAAAACTGTTTCTTATTTTTA CTTTTTAGTACCGGCGCACTGAACGTCAGCCATCATTGGTTAAAGCAGCT CGCCAGTTCCAAGATAACATTCGCTCGCGAGCTGATTCAAAATTGCGTGC AGCCTCAGACAGGTATACAATTATATAATGATCAAACACTACAATTTAAG AGCTTAACTTCAGCATAATACTAGTACGGTTAAGCGTTAGGCGTCCCTCG ATCGCGGGATTTTGCCTTAATTACTTCCTTCATTCAAATTTGGGTCTCGA TGTATAGTAAACTAAATATATATAAACATCCCTTATTCGAGGTCATGCAT TATAGTCCATCACTTAGGTTAGTCATTTCTAAAAATTAGGGCCCCTAAGG AAGCGCGTGCTGTAAGATAGCTTCGTATAGATAATGCTCTGTTCGCAGCC CTATAAGTAAGAATTCAGGTAGATTTTAGTCTACGTAATACTTTAATACT TAACCATGGTAGATCTTAAAATCGGGATCTGGCTGTGACACCGGGGGAGG GGTGGGATATCCAGCCTGATGGCCGAGGGGTACGTGTCGCAGTTAAATTG AGCCCTGTCCTAAATAGTTCGAAATATGGACCCTAACAGACAGACAAGAT TTTGACCCTGTCAGATGTAGAATTGTGAAATGACCAAAAGTCGACCTTGT GGGAGATACAACTTTCAAAATTTATAGTATTTGCAGCCCTGTCAAATATA TTCAGAACTCAAAAAAGTGACCCTGGCTAGTGGCACGTCCCCGTTAAAAG ATCTAAACATCTAAAAAACGTACAGAATTTTCTAGAATTTCGTAGTCCAT TTAAATTCGATTAAGTTCAAATAGGAACGACTGACTCGATTTTGAATTCC GCTCGAGTCACATCGTCTGTTGATGGCGCAATACAACTTGCAATATTCTT TGGCGCTTATTATATAAAAACATTAAAGACTTGGGATGGTCATAGCTGTG TTGAGAAAAGACCCTAATATTCTGACGTAAAAGTCACACCCCCATTTGCA ACGTCAAAAGTGCAATGCAGAGTCTTCAAAAACTTTTCTAACGAATGTTC ACGAAGACAACACAGGCGAATAATTAGAAAAATTGTTGAGGAATTTAGCA AGAATTTAAATAAAATTTTAAGGTTATAAATAATAATTTGCTATATCATT CAAAATGGAAATTTTGGGACGTTTCAGGAATGGTAATTTGGAGCGAGAAT TGACCGCTTTACAATCCAAAATGGATCAAAAGATGGGTGAATTAGAGGTA AGGTTTAGTTTAGAGCTAGATTTTATTTAGAATATGTCTATAGATTACAG ACATAGGCTAATTTTTCTGTAATAATGGAGCTTGAATCTTTGACTTTCGA GCGATAAACTCCAAACGCGCTCAACATAATAACATAAGTTATAGAATTTT ATTTTATTTCTGGATATAGCTGCAGTTTATTTATACTCCGTTCAACTATA GGCGTAGTGGTATAGTGGTTATCGTGCTTTACTTCTGTCCAAGAGGACCG AGTTCGATACCCACCGTGGCACTACGATTCACTTGGCAAGTGAATGCTCC TTCGCCCGGGTCAACCCATGCCATGTGAGGGGAATTGGGTACCATAACTC TGATACAAGAGTATGGGTAGATATTCCAAACATTGTGGTGTGCTAAGACA CTTAGGAGGTTCTTCACCTGCGAGGACACCCGTTCTCCCGTGTAGTTCAA GTGTCGTGGTATACACCATGGCTCGGCAGCTCGCATCTGCAGGGTTGCAA TGTCTTCTTGCTCTGTGATTCCTACTCCATCGTGGGTAGGACCCATTCCG ATGCATCGGAGGGCATATCTATCATTCAACTATATTTCTCGTATTTGCAG GGTTTACAAGAGATGTCAGATCAGACAGCTAAGCCAGCTGCCCACATCTT GGAAACCGTTATGGGAGAGCTGGAACAGCGAGTAAGTAGTTTATTTAGCC CCTTTATTTTATCATAATAAAGAGTCCTAAGTAATAAATTCTGATTAGAA ATCTCTCGCTTTGTTTGATCTCCACTATAGATCAGGGCTATGGAGGTTTC TTCTTTCTAACTTCCCCAAGTGAAGCTATTGATCAACCTTTATTTACACT ACTGTCATGAATTGGAAAAAAGTTCACGCCGTTGAATAAAATGTTAAGAA CTAGAGAGCGAGATCTTAAGAGACCCAGTGCTGAAGAATGGAATAACTCA TGCATGTGTGGCAGACCTTAACATTTCATTCAATATTAAGCAGATATTCA ATAGGTAAAAGTTGGTTATTGAGATTCATCACCGAGGGTTGATAAATCCA AGAACCAACGTAAACCTATTGAATATATGTTAAATTATATGCCCAAGACG AAAACAAGTTATAAGTTTCTATTTTGTAGATAGATTCACACAAAACTCTT ACACAAATCGAACATTCGATTTTTTTTCTTTTTAACTGCTTTTTAATGAC TTAAGTCATTCAATTGTTCACGAAATTCACAATTGAACTCTTTTATTGTC TCTCTTTATTAATAGCAACAAAATAAAAGTGACAAAAAATCAAGTTTCAA AAAAAGGTTTGAAAAAAAATTCTACTGTGGTATAATACCGTGGTATATCA GGAATTATTCAATGGCTGTTTTTGCCTATAATAAAAATAATAATCAAACT TACATGCCAGAAACCTGTTGGGAGCCACATAGCGGCATTCACTTCCGTTT CGATTCATTTTGAATGTGTTTTTCGGATTCTTTCTTGATATTCTCGACGA CCCTTCTTGTTTTAGAATTTGGAACTTTCCTCATTGTTGAAGCAATCTGA GAGAAGTCGTGTCGAGATGGAAGACGTTCTAAAAGAACAAAATGAAGGTC AGTTATTTAAATTATATATCACTCGGTAAATCGTTCGCCTTTCAATCCAA ATGTTGTGCAGGTTCGATAACCATTTGATGATCACTCATTAAATGAGTGA GTGGCTTAAATTGGATAATATTATCTTACAGCCAATTCGATTGACTTCAA AATTTGCCAATTTTGCCCTGATTGCCAATTATTTTGCATTCGATTGACAA AAATTTGGCAAATGTGGCAAAATTTGAGCGCCATAAATGCCAAATAAAAA AGATGTGATGAATCTGGCATTCTTGACATTTTTGGAACTTACCTCCATAC AAAACACTGTTCCCACGAGACCTTTCGCTTTTACAAATGCCAATTTTGCT ACTTTTGCCAAAGATTTTGAAAAATAGAGGACCTTCCAATGCTAAAGCAA AACAATGCCGATCGGCAATTTGATTGGTTAAAAAAATCGCCCGCGTATAA GCACTTTGCGCTCTACAAACGCCGACAGAAAACTTCTCACGAAGCATCAC AAAACGGAAATGATAATGGCGGTGTAGCGGTGTACAAATTTGCCATGAAG CTATGATCTTTTGACATTGAAATTGTGGATTTGACAAAGTTGGTGAGTAT GGCAAATTTTGAAGTCAATCGAATTGGCTGTTAGTGGTAGGTTACTGGGA TCTAAGAGTAGATGTGATCCGATGGGCCACTTCAGTAATTAATCACTCTC GTCAAGACACCCACTTCTCACAGACCCGGTAGGAATTTTTCAGCCAGTGG GGGTTAAAATAACGGACTAAAACACAATGGGGATTGATATTTCCATGTTT TCTATTGTTGGGGATTTGAATTTCATTATTTTGGAGTCAAAAAATTCAGT GGGGATGGAAAAATTAAAACAATATTTTGCAATGAGGATTTGCTTATCTG ATTTTTTTTCAACGGGGACAAAAATTACAGTATAATTTTCGACTGGGGAC GATATTTTAGCCAATTTTTCCAGTGGGAAGGGGTCCCAGTGGGTCTGTGA GAAGGGGGTGTGTCAAGCATAAAGTAAAAAAGGGAATGGCTGCGCAAAAT AACAGGCTGGTAATCAGCGAGTGTAAGTTCTAAAATTATCTTTTCTCTTA TTTTTCTACCATAGAACTGACAACATTACGTGCGAACACTTTGATTATGA AAACTTTGGAAGAAGAGGTTACTTTATTGACTTCAAAGAAAGATGATCTT AACGAGCGCGTCAGTGATCTCGAAACCGGTAAGTCATTTTTCCGGAGGTA CCCCGAAATAAAGCGGAACATGTCATCTGTTTAGTTTTAGATTGAAGAAA TTGCAGTCTTTTCCGGTGTTCCCAATGTAATGGATTACGTCAAAAATATC AAGGATTCTGAGAAAATCTAAATAAGCTTCCACCAGGCTTGCAAATTGAT AGATATAAATATACTGGGTTTTTTGGTTTGCAAGAGGTTATGGGTTATCG AGCCTTAAAACCGATACACCTTTGGCAGCGTAGTATTTTTTTCTCCCCCC CCCCCCTGTGTTTAAATTTCATTTGGCTTATCTGCAGATAAGTATTTCGC TCTTCCAGGGAATCATCAATTTAGCTTAAGGGTAGCGACCAAAGCATAAA CCAGGCTGATTCAACAGGGATTAAAAAGTTCTGAGCTTATCTTTAATTTC TTTTGGGATAAATTTACATTTTATAGAGCTTCACGAGCGTCAATTGCATG AGCAAATGTTGAATCAAAAGTTGAGTGACTGTGAACACGAGAGACAAAGC ATGGTACGTATATTGTTTGCTTCCAAGAAAAATCAAAAGTCTTTCGAAGT CACCTCAATATTTGGTAACTCCCCTTACCTCTAAAGCCTTAGAGGTATCC CGCAGCTATTTGATGTTCGATGAACGCTATTGGGACATTGTTGCGTTCAA ACTGGGCTAGACAATTCTCGACAAATTAAAATAGTCGCCCGTGCCGCTGC AGCTAACGTTCATTACGTTCGCTTAGCATAGTTATTTCCAAACTAAACTC CAAACTTATATCCACGATTTGTGAGTAGAAAAGTCTACAAAATTAGCTCC ATTTAACATGTTCTATTTTGAAATGATATATCTTTGTAATTTTTTTTATT TCTTACAGGAGCAAGATAATGCTTCTAGACGNGAGTAGAAAAATCTACAA AATTAGCTCCATTTAACATGTTCTATTTTGAAATGATATATCTTTGTAAT TTTTTTTATTTCTTACAGGAGCAAGACAATGCTTCTAGACGAACAGAGAT GGGCTCCAAATTATCATATGCGCAACAACAAATAAAAGAGAAAGAACTCT GTAAGTAACCTATAGAATACAAACTACCATCGGATCTTCTAGTAATAAGG GACCTTAATCTTCCATCTCTTTAAAGGTAACTAACTTACTGACCGACGAA GCACCGGGATGTCCCAGAGAGGCTGGGGCCGTTAATTTGAATAAAAATGA ATCTTTCTAAAATTCTTCCAATTGAGTAAAGATGTAAATGGTACAGACCA GAGGAGGTGGTTTTTGTACTTTACCACTCTTAAGAACTCTCCCGTTCTTT TTTACGACGAGCCCCATAAATTCTGACAAACAGGCTGTCAGGATCCAAAT ATATTGGAAAGCATATCAAAAGAGCGATTCTTTAAAATACTTACCTCTCT TTGTAGTGGTTGAAAATACTGAGATTACGGTGAAAGAGTTATTTGAGAAG TGTAATCAACTCGGAACAAGTAACTCGGAAGTCAAACAAGAGTTACTTNG TTATTCGAGAAGTGTAATCAACTCGGAACAAGTAACTCGGAAGTGAAACA AGAGTTACTGCATTGTTTGGAGTCTGGCAAACGACTAAAAGACCTCAACA CAAAATTACATTTCTGTAAAGATTATTTGGAACAACAGGTAAGATTTGAG TCTCATTTTTTCATACGGGTCAATAAATTTTGTTTGATACGTTCTCCAAT CCAGCAGCGAGTAGTCTAGCAAGCTAGACGACTAATTCATACATAGTAGA AATAAAGCAAAAAGTAATGAATGGAACAATTTTAGTCGTCTAGAAACCTT TGTGCACTAACTCCAAACAAAAGAAAAGTGTCAATATTGCAATTCTAATT TTTTCCTGCTCAAAATAATTCTTGAGAAAGAAAATATGTGTGGATTTGTG TATTGAAAGTTTTTCATTTAAGTTGATTTCGTTTTGAGAGTTTGTTGTTG CTTGATAAATTGTTTTCTCGCTACGCAAGTTTCTGCGTAGCTAGCCCCAG TATCTATAAGGCTGGAACACCGGATTCTTCCAGTCGTTTATACAAACTAA ATCCCGTATTATTATTATTAGTATATTACACGCATTATAAACGACTCCAG TCTAAGCAGCGAGCTATCAAACTTGCGCCAAAAGCTAAATGAAAGAGGAT TGGATTCGATTTTATTTGTGGCGATTTACGCCAAAATCACTGTATCGATG CACAGATAGTGATATTGAACACGCTTCGATGGGTTGACAAGTTTTTTATT TCAGTCTGCTAATTTTTTCCCTAATGTTTCTTTTCAAATGATAGAATTTT TCAGTTTATAGGGCAGTTTTATGCGCAAAAGAATAAAACAAAAAACGGGG GAAAATGGCATAAGTCGGTTGAAGCCGATGAAATAAACTTTTGTAAAAGA TCCCGATATACAGTCAACTCTCTAATTCGAACCTCCACTATTCGAATCTT TCTCTAATTCGAGGAAAATTCTTGGTCCCTTGAAGATCGAATTAGAGAGA GTCAACTGTTCTATTCTCGAACTATAGGTTGACCAATTGATTAAAGATTT GAAAGCATCACGCGGTACGAACGAACAACTTAAACTGGAAATGTCCAATG GTAATCGAGAACGACAAAACTATCACAAACAAGTCCTCCTCCTCGAAGAA CAGTAAGAATGATGACTCGTTATTAGACCTTTCTTGAGATTTTTTCATGA TTTCTTTCTTTGCAGAAGCTCGTGAATTTCCTGACCCTTCCACATAGAAA CTGTATGATTTATTACTACTTGGAGGTAGGAAACAGATAGTCAAGTAGAA TTTTCGTCGAAAATAGGACCATCCTTGGAAAGTTTTAGCTCAAAAGGTTT TGACATACTTCTTCATTTAATTTCTTTCTTTCTTCTTTCTTTTCAGACAC AAACAGACAGTGAGTGAGATGCATATCATGAAAGAAAAACTGTCTTCAGT TGAAAAACAATTACACGTAAGCAGCCTTATGTAATTTCAACACCCCCATC ACTCACCCAATGGAGTTAACACTAGTCCTGTATACTTATTTTTCAGGTCC AACCCACTGGTAGAAAAATACTTAGAGCACCATGATGGTAGGAGACAAGC CTAAGGAGCAATTATCAGTCTTTTGTCTTTATAATTTTAGACTCCCCTTA AAAAAAAAAGCAAAACAGACATAACATACCTGAAATCAAATTATCTTTCT TCTTCCAGGAATACGAGTCGGGATCGATTCGAAGCGCATGCGTCATCGCT GAGATAAATAAAGAGAAAGATAGTAAAGAACTCTTGAAATTATCACTCGA AAAACAAGTAAGCTAACAAACTTTTTACGCACTTTCTAAGTTTTTCATTG GCCTCTCTAATGCCATCGACTTAAAATATTGGTCCCTGAAAAGGAGAATA AAATAGTCTTTGTAATTCAAATCTTTCTCTGATTTGAAGAAAGTATTTCG CTTCTCCAGTAAACTGTACATGACTCAACTCCCTATAACTCGACTGATTC CCAATTCAAATTATAAAAATTATGCTATGTTTTCTACAGGATTTAGAATT CACCAGATTGGAAAAATTATGAACATTACTTTAAATTATTTAAGCTCAAA ATGTCAATACTATTTCACATTTTTATTTTAGGTTCGTGATTTGGAGGGCG AACTGAAGTTAAAAGAAGAAGAATTGAGGGCTTCCGAGATGTTCGGAAGA AAGTTAAAATCAGGTTCGTAAAATTTCGTCGTTTTGTATAAGATTCCCAT TTCCGCACTAAGATTCTTGCTACTTTTCCGGAATTTTTTCAAAGTTACCA AAAGGCATTGAGATTTCAGCCCGACACACAAAACATCGCACCAAATTAGT GTTGCGATTTTTGTCATCTCAGAGAAGAAGTCATTGCATTGTTTTTTCGC GCGCGTGTAGTATAACAGAAATACAGAATTCAAAAGCTTACTAAATTGAA GACAATATCTTAGTGATAAATTCCTATGCAACTTGCGAGCAGGAATTAAT CTTGTCACTAACAGTCCGAGGGTAATAACTTGGGCGTGATAATATCGTGA TAATCACAATATCAGGGCGAATTGACTCAGGGGTGGTCAACTGTGGTTTA GACCATTTATCATCTAAGGAAATTACTTTAAACTGAATTTTCAATATTCT TCTTTCAGATCTTGTTCAATGTCATGCGAAAGTGGTAAGAATTACTTTTC ATCTATTACTGGTAAATTTTCCTACGCAAGGACGGGTTAGCCATCCCATA GACTAGCCTACTTTTAGCCTTACTTTGCTTTTTCGATCATTTTTGATGAC GCTGAGTCTAGCGAAGTACACTAGGAGCACTTGACACTTGGCCATTCTGA AGTTAAAACACTAAAAGTCAAAATAGCAAAAAAATACTTGCCGTTGAAGT ATATAATGAAAATGATAAACCAACATCAAAAACAGATTTGAAATACCCTA TTTGCAAATAAAAAGATTTCTTCATCCTATCCTTAGCTTTCAAAAGCAAC TAAAATCTGGTTGACTGTGCCTAAGCAAAAAGCATATTACCATATACGAT CAGGCCACTAAATTGCACCACCATCCAGTCTTAAAAAAGCTTTAGTGGAC TCCGATCAAGCCATTTCGGGGTAAAACTCAACTTTTTTTTTGGGGGGGGG CGAAATAATGCGCAAAAAATGCCTCTAATTACTAATTTCAGCGCCCCTAT GCTCTTTTAAACCTTAGATATGGCAGTTTTCGGCCAAAAAGAGAGAAGAT ACCCCCAAATTTTCGTGCTTTTCATAAGGGGCGCCAAAATCTTCTAAAAT TGCCTCCCCAGTTTGCCTGAATTTTAGTCGACCCACCACGCTACTGGTAC AAGATGGATGAATAAGGCGGCTCATAGTGTGCACCCCCCCCCCTAAATCA AGGGGAGTTTTGTTGATTTTTGGTTCAAAATCTTTAGGTGGGACTTTTTG GATTTCAGGGGGGAAAACAGGATTAGGTGGGACCTGATTTTGTGGGACTA AGGTGGTTTGGTTGTAAAATTAAAACATCTCATCAACATCAATCAATGAT ATATAACTTTAGTAGTTACCTTTTACTATTGAAACCTAGTGGATAATCTT GTACATATGACCTGTATTATACTTGAAAGAAGACTTAATTTTTTTTTCCT AAATTCTGCTGGGAATTCAAATTTTTCAAAATCTTGGTGGGGGATATACT TAGTGGTGGTACCATGCATGATTGATTCTAGGTGGGGATTTTAATGTGAT TTAACAGAAAGATTTTTGTATCGTTGATTGTCTGAACTTTCACTTTCTTT CAGGAATACTACCAAGAAAGTTTTATCGAGAAGCAGGAGTTACAAAAACT GAGAGCTGACCTCGAAATTAAGGTTTGTCTTTCGATAATGTTTCACCGTT TACTGAATGCAAGGAGCTTTGTATCCTAGCAAATTTTCAGTCAGAGATCA TGACGAGATATAGTTTTAACAGCTGAAGGACGAAATTTTAAAACTTACGT GAAATGTATGAACTCAGGTCCTGATAATGATTCTAACTGAAATTTCTCAA TATTTTTATCCTCATTTATTTTCACTTTCAGTACAAACTTGACTTGAACA CACAACTGCAACGAGTTGGCGATATGTTCGAAAAAGAGGTAAAATGCTAG GCTCGACCAAAATTTATAAGATCACACCTAGCTCCACTCTTCCATTCCCA AGCCAAATGATATTTGAACGAAAGGAGTCCTAAACCTGCTCTCAAAACCT CAAATCCTAAAGAAATAGGAGCCCGTGAAGTTCGGACTCCTCTTTTGATA TTCTTTCCAAAAATTTATAACAAGTGCTTCCCCGGGCCTACGTTATTTCA ACGTTCATCTAACGTTAAACGTTTATTGACAAGTGAAATTACTGAGTTTT TAGGGTAGCAACTTAACACTCGGTATGAATAAGAAAATATTCTAACATAT ATTTCAATTGTTCTTTCAGCAAAATGAATTGATTGAAACGATGAAGACGT CTTTGAACGCGAGAAGTGAACCAGAGATGTATCATACTGCTGTCACTCCT GAAGCTCTCCGTCTCAGGGATTTCTATCGTGCTCACACTTAAATTTTAAC CCTCCTCCACTTTTCTTTTTTTCTTCCATTTTCTATTTATTGTTACACTT CTTTCTTATACTCATAATAAAATAATAAAAAACAAAACGGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031874XLOC_031874Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050344-exon-scaffold_169-1575043694:175675..176142TCONS_00050344-exon-scaffold_169-1575043694:175675..176142Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:173681..173784TCONS_00050344-exon-scaffold_169-1575043694:173681..173784Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:172546..172615TCONS_00050344-exon-scaffold_169-1575043694:172546..172615Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:171862..171942TCONS_00050344-exon-scaffold_169-1575043694:171862..171942Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:170946..171027TCONS_00050344-exon-scaffold_169-1575043694:170946..171027Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:169715..169828TCONS_00050344-exon-scaffold_169-1575043694:169715..169828Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:169190..169266TCONS_00050344-exon-scaffold_169-1575043694:169190..169266Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:168643..168724TCONS_00050344-exon-scaffold_169-1575043694:168643..168724Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:168055..168286TCONS_00050344-exon-scaffold_169-1575043694:168055..168286Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:167041..167165TCONS_00050344-exon-scaffold_169-1575043694:167041..167165Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:166727..166796TCONS_00050344-exon-scaffold_169-1575043694:166727..166796Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:166386..166484TCONS_00050344-exon-scaffold_169-1575043694:166386..166484Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:165980..166061TCONS_00050344-exon-scaffold_169-1575043694:165980..166061Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:165509..165534TCONS_00050344-exon-scaffold_169-1575043694:165509..165534Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:164321..164389TCONS_00050344-exon-scaffold_169-1575043694:164321..164389Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:164055..164111TCONS_00050344-exon-scaffold_169-1575043694:164055..164111Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1575043694:163500..163723TCONS_00050344-exon-scaffold_169-1575043694:163500..163723Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:175675..176142TCONS_00050344-exon-scaffold_169-1510915933:175675..176142Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:173681..173784TCONS_00050344-exon-scaffold_169-1510915933:173681..173784Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:172546..172615TCONS_00050344-exon-scaffold_169-1510915933:172546..172615Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:171862..171942TCONS_00050344-exon-scaffold_169-1510915933:171862..171942Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:170946..171027TCONS_00050344-exon-scaffold_169-1510915933:170946..171027Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:169715..169828TCONS_00050344-exon-scaffold_169-1510915933:169715..169828Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:169190..169266TCONS_00050344-exon-scaffold_169-1510915933:169190..169266Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:168643..168724TCONS_00050344-exon-scaffold_169-1510915933:168643..168724Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:168055..168286TCONS_00050344-exon-scaffold_169-1510915933:168055..168286Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:167041..167165TCONS_00050344-exon-scaffold_169-1510915933:167041..167165Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:166727..166796TCONS_00050344-exon-scaffold_169-1510915933:166727..166796Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:166386..166484TCONS_00050344-exon-scaffold_169-1510915933:166386..166484Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:165980..166061TCONS_00050344-exon-scaffold_169-1510915933:165980..166061Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:165509..165534TCONS_00050344-exon-scaffold_169-1510915933:165509..165534Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:164321..164389TCONS_00050344-exon-scaffold_169-1510915933:164321..164389Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:164055..164111TCONS_00050344-exon-scaffold_169-1510915933:164055..164111Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1510915933:163500..163723TCONS_00050344-exon-scaffold_169-1510915933:163500..163723Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:175675..176142TCONS_00050344-exon-scaffold_169-1491911889:175675..176142Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:173681..173784TCONS_00050344-exon-scaffold_169-1491911889:173681..173784Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:172546..172615TCONS_00050344-exon-scaffold_169-1491911889:172546..172615Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:171862..171942TCONS_00050344-exon-scaffold_169-1491911889:171862..171942Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:170946..171027TCONS_00050344-exon-scaffold_169-1491911889:170946..171027Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:169715..169828TCONS_00050344-exon-scaffold_169-1491911889:169715..169828Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:169190..169266TCONS_00050344-exon-scaffold_169-1491911889:169190..169266Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:168643..168724TCONS_00050344-exon-scaffold_169-1491911889:168643..168724Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:168055..168286TCONS_00050344-exon-scaffold_169-1491911889:168055..168286Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:167041..167165TCONS_00050344-exon-scaffold_169-1491911889:167041..167165Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:166727..166796TCONS_00050344-exon-scaffold_169-1491911889:166727..166796Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:166386..166484TCONS_00050344-exon-scaffold_169-1491911889:166386..166484Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:165980..166061TCONS_00050344-exon-scaffold_169-1491911889:165980..166061Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:165509..165534TCONS_00050344-exon-scaffold_169-1491911889:165509..165534Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:164321..164389TCONS_00050344-exon-scaffold_169-1491911889:164321..164389Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:164055..164111TCONS_00050344-exon-scaffold_169-1491911889:164055..164111Clytia hemisphaericaexon
TCONS_00050344-exon-scaffold_169-1491911889:163500..163723TCONS_00050344-exon-scaffold_169-1491911889:163500..163723Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_169supercontigscaffold_169:163500..176142 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
45.247 45.4452 41.7707 45.8498 9.01403 9.04074 0.330523 0.77358 0.216641 1.07338 0.390692 0.171217 0.256469 0 0 0.0233342 0.172475 0 0 0 0 0 9.13783 10.7195 20.4255 9.361 0.528772 0.376213 0.428017 1.59896
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050344 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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