TCONS_00050204 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050204
Unique NameTCONS_00050204
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5639

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050204 ID=TCONS_00050204|Name=TCONS_00050204|organism=Clytia hemisphaerica|type=transcript|length=5639bp
CCTTACCCAGCCGGTTTCACCGTACCCAGCTGATTTCACCATACCCAGCC
GATTCCCCCCTAACCAGCTGATTCCCCCTACCCAACTGATCCACCCAGCT
TATCCCACCCAAGCCAGCCAATCACATTTATACAGCTGATCCCATCTCAT
CCTTTCCCAATGAATTCCCATGCATCCATCCACCCAGACGATCCCACCCT
ACTACCCAGCCAATCTCATCCCTTCCCAATGAATTCCATACATCCATCCA
CCCAGAAGATCCCACCACCCTACTACCCAGCCAATCCCATCCAATACAAT
GCGATCCCCAACCTATCCTGCAAATTCAACCCTATCCTGCCAAATTCCAC
CCTACCCCCTACCCTGCCTAATATGCATCAAATTCCATCCATAGATCAGA
TCCCAGAAACCCAGCTGATTCCATCCTAACAAGCCAATCCCATCCTACCT
CTAGCCAATCCCTACCCTATAACCAGATGATTCAGTGTTGGCTGATTTTA
CCCAACTGATCCTCCTATCTATCCCATCATCCCAGTCCAGGCCAGATGAT
TGATCCCACAACAGCTCCCACAACATATTTTGTGGTCCAGCCCATCATGC
CATGCAGTCCAATGCCATGCAGGATCATCATCTGCAGTACCAATTGGACT
AATGCAATTTGCCCAACTGATATATGATCTGCCTAATCAATTCACCTAGC
CTGCCTAGGTAGGTGGTGTGATCACACGATCCTGTTGTCCATCCACCACG
CCACACATCGTCAGTCGGTTGTTTGTACCAGTTGATGATCTCCTCTCCCT
TGCCTCCTTTTTTGTGCCCCCAACTGATCCCACTTTGCTCAGACACCATC
ATGAGGTTACCTAATTGGAATTCCAACCTGAATCtaatctcataaccgat
caccattgctaaggcatatgatgatctgaaaagtttctccagcgaaattt
tacaaATCCGCGTTCGGGTCTGGGGAAGAATTATGACACGTGACCAGATA
CCGgtatctgattggatgaaagaaAGCGCGctaaatgtatttttttcgat
ggaaaatgaaagtgaaagtcaaaacaaaaaaaattttttttacaaacagC
TAACTGCTGTGTTATGGCTTTGATTTCCCTGGTAAATATTGAGGTGAAAT
GGCGACACCAAAGAAAAAAGCAGTACAAATTGGGACCTCTGAAATAAAGT
TTCAGTTAATTAGGCAGACGTGTATATTTTGTGGTGgcaattttaaaata
caaaaaataagcTCATATGAGACAGTTACACCTAATCTCAACTTGATTAG
AAATATTCTACCTGATGGTGATTCACTGCTGGAATGTGCCCAGTTCCAAA
AGTTAAGATTTTGCTCAAAATGTAAAACTAAATTAAAGAAGGTAGATACC
ATGGTATATCAACAAGCACAGTTCAAAGAGCAGCTTTCGGCAATAAAATG
TAAGTATTGACCTTTTTCTGCTACATATAGACCCACCAATTTTAGTTCAC
AGCCTTAGTCACCAGACGACATCTTCATTTATATAGACTTAAAGCTGTAG
ACGGTCTGGCCCTGGCAACCTTAACCCTTTgtcattttaaaaaaaaataa
gaaagatcGGATACAGCAGCAGTTATTGACCTTTCGCTAGGAAAGGTTTA
GCATACTGGTAAATCACATTTCGATGGATGCAAGGGAAACAACAATAATA
ACAAAGTTTCCCTTGCATCTTTTGGAAAGGCGGGGTTATGCTGGTGTTTA
TAATTATACAAAATGACATCACACCTAGCCgaaaggtctattgaaaaaaA
GCATACCCACATGGGATTATTTTTCAGCTCATTTTGAAGAAGAAATAACA
ACAAAGAGAATAGCAACACCAACTCAACCACTTTCAAGGAAACGAATTAA
CTTCAGCATCACTCCTCAACAAACGCcaacatcaaaaattttgcaaaaag
tcCAAAGTACTTCTAAAAAGTCCCCAGCACAAAAGGAACTAATGTCTCCA
CTTTCCAAAATTCCAAAAAGAATCCAAACTAAACCTCCCAAATCAGCAgc
aacgccacatagaagaacGCCACTTTCAGAAATCCAAACTATTCAAAGGA
GAGCAACAAAGATTCCACAAAGAATATTGATTGCCAATGAGAAGGAGAAT
GGTGTTATTTTGACCGAGAAGATTCCATCAACTAGTAGAACAATAGCATA
CAATGAGGCAAAGGTCATAGAAACAAATGAAGGTGGAAAAACGGTACAAA
gaacattgaaaaagaattatgCCAAAATCGCCAAGTATCTTTCAACCAAT
TTGACCAGATTAGCTGCCAAAGCAATCTGTAATTCAGATGAATTGCTTAT
AGAAGTTATTGAATGCATAGCAATGAAATGTCGAAGTGAGATTGATGGTT
TGAGTGGATTAAAACAGCCTAGTATTCTGCGAGACATCTCCCCAGAACAC
ATCAGAACAATAGACATTGCTCAAATGAGACTGGAATTTAGTAGTCGGGC
CAAAACTATGTTTCAGCTGTTAACACAGATTTTGTgctcaaatgaaaaag
aagcaATCATATTACTAGCAACAATGGTTCATCTCGAAAAAAAACACCTG
AGTGCCTTTGCCCACAAACTCGGACTTGTTGCCCGAAAATGTGGAATGAA
TGAGAATGGTCTTTCAATGTTGAATCACTTGGGATTAACAAGCTGCCCCC
TAACGATTAGAGAAAAGCTGTATGAACAAGGAATTAATCACGATGCAAGA
CTCTTgaattggattgaattgCTAAAGACCTTCCAGCTAATTATTGACAA
CTTGGACTTGAATATCGGTGTCAAAcatcaaacaaataaaaacaaaacat
ccaCCTACCACTGGGTTAATATGATTGCAATTGCTGATCCAGTGTTTGGT
GACCACCTTAGCGATTTCCATCAGAGACACTTAGGAgatGTGGACGTAAA
CGAATTTTTTCCCACTGAGTCAACAATCAAGTACCTCAAAACTGATTTCA
CTAATCTCTGTGCcagaattttggtgaaaagagTCAACAAACTTCATGAT
ATCGCAGTCAAACATCACATTAATCACATTTACTCAGAAACTATGACACA
AAAGTCTGAAGAGATTCCACTTGGAGTACTAACGCTAAACGAAAACAAGA
ACGAAGACATGTTAGAGATTTTGAAGTTTCTTCAAGATAAATACGCAAAA
AATGCAAAAGgaaataaaaacattatcttTGTTGGTGGTGACCAGTTGAC
AGAAGAAAGGGCGAGAAACGTACTATTGTCACAACTCAACGGAAGGACAA
AGGAACAGAGACTAGAGGCTTTGTTTCCTAAATTTGAAGATTGGCATTGT
ATCCGGACAGCCTATGATtcaGTCATCAAGATGCATCTTTCTGGAATGGA
TAAGGGTACGTACAAGTGCAACACCGTTCGCTCTGGTAACCCTAAAGCTC
TTGGAGATATCAAACAGAGATATGAACaaatcaaagaattttttctaatG
CAATTGGAAGCATTGATTGTGTCTGCATTCCTAAAGCAAGAGGGTATGGA
AACTGTTGATGACGACTGCGTTCCAAAGCATATCAAAGATGGTGATGCAA
AAAAGCGATGGCTTAATGGAAGGGTTTCTGTGATGATCGAAACTTATGTA
ATGCCTCATCTTAGAACCTTGTTGGAATCCATACAAAAGGAAGGTGATAG
CGAAAAGGAAGACAATGTTGGGTTAGAACGAGAATCGATAACTAAAGATT
ATACCAATAAANAAAGGAAGACAATGTTGCGTTAGAACAAGAATCGATAA
CTAAAGATTATACCAATAAAGATTTGCAAAGCAAAGATAAGCCTATCGAA
CCCTTCAAACCAACCCTAATTGCAGATGCTCGTACAAGATACACTAATGT
CAACGTGCTAACCAACTCACGTGTGCTACTATGCAGCCCTAATGTTTTGA
ACGCCTTACGTTTAAAATCTTCAAGCCCTAGTGTGATGAGAAATGCATGA
GGAAGATTCTCTAACATAAAAATAATGGCCAAGCTGCCAACGTCCAAACC
TAACCATCCTGCAAAACCACAACAGTCAACTCAGAGCAATGCAGCTATAA
ACCCAAAACAGACACCATTGTACATAGCTATCAAACAACAAGATGCAACC
CAGAGAAATGCAGCAGTCAATGCTAAACAGACGCCTGTTTACATAGCTAT
TAAACaagaacaatcaaaacaaaccaatgcTGCAGCTAAACAGACCCTAC
CTTTCGAAGTCGTTAAACAGCAAcaatcaaaatcaaccaacGCAACTATT
AGCCCCACAAAGATTCCAAGGCTCGTAGTAGTTAAACAACAACTATCAAC
CCCAAATGTAGCTCTTACCCCAACAAAGACTCCATCATTACTGGCCGTTA
AACATCCACTATCTACCCCAAAACAAGCTGTTAATCCCACAAAGATCCCA
AGGTTTGTTGTTGTTAAACAACAACCATCAACGCCCAAAGCAGCTGTTAG
CTTCAAAAGAACCCCACCACTACCGGTCATTAGAAGACAACAATCAACCC
CAAAGGCATCTGTTAATCCTACAACGATTCCACCATTGGTAACGACTAAA
CAACAGCTACGGTCAACTCTAACCAATACTCCTGACACAACGTTTGTAGA
CACCGAACAAAAACAGTTGCCACAGAGCAATACTAAATCTACACAAAAAG
ATGATTCGTTGTTTAAGTATAGCTGTTCTTTGATGAGTTGGGGTTTGTGT
CTGTTGGATGCAGATGATGCAGTACGAGAAGGTGATGGGAATCGATTGAT
GAATGtatatgaaatttttcaattgctCTTCCGCATGATGGGTAACACCA
AATACAGTTATAGCCTTCTAAGATTGAAAGCTTGCAGGTTGGCTCTCCTC
ACCCCTAAAACGGCACATCAACTTGTCTGGAACCGATTCTTCAATAAAAA
CGGAGGAAAAGGTCAGAACATTTCACGCGATTTGAGATTAGAGCATATTA
ATCGATTCATGAAAGAAATGATAAAAGCTCAAGGGCTACAGAACATTTCA
AATGATAACGTCTACAAAATTTCAAAGGCGTACCAAGGAATTAGAGAAAT
CTGTGATTCTATGCTGGTGGATACTGATGTTTCTAAATCAGATGGACATC
ATTCAAACATTCACAAGAATGAGATGTTTAAATCTGTTTTACAGGAACTT
AATGCTAATGAGAATTTTTCTACTCAACAACCAAATGAGATGCTTAGTAC
GCAATTTGAAAAGATGCAAGAAAATCGATCAcagaatttgaaaacaatgA
TACCATGGATTAAGGGGCATAGGCGAGATTGGGATGTGCAAAATGACTCT
TTGTACAACTTtaaaacaattaattaaaactaaaaagtCTTGACTGCACg
ctgttttgtatttttattataTTCTTAATATTTATTAACGTGAAAACTAT
TCTTTTAGTTATTTATAGTTGTTTATATTTCATTGAGTTacaaaatatta
tatttatcattagattatatatttattatatttattatataCACATCACT
AGGAGACTTTAATTACTCTTCTCGTTATTTTTGCACTTCACCATCGTACT
TATGAttttatactttattttttgtcgtttttatttcag
Run BLAST on NCBI

transcript from alignment at scaffold_168:34165..41613+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050204 ID=TCONS_00050204|Name=TCONS_00050204|organism=Clytia hemisphaerica|type=transcript|length=7449bp|location=Sequence derived from alignment at scaffold_168:34165..41613+ (Clytia hemisphaerica)
CCTTACCCAGCCGGTTTCACCGTACCCAGCTGATTTCACCATACCCAGCC
GATTCCCCCCTAACCAGCTGATTCCCCCTACCCAACTGATCCACCCAGCT
TATCCCACCCAAGCCAGCCAATCACATTTATACAGCTGATCCCATCTCAT
CCTTTCCCAATGAATTCCCATGCATCCATCCACCCAGACGATCCCACCCT
ACTACCCAGCCAATCTCATCCCTTCCCAATGAATTCCATACATCCATCCA
CCCAGAAGATCCCACCACCCTACTACCCAGCCAATCCCATCCAATACAAT
GCGATCCCCAACCTATCCTGCAAATTCAACCCTATCCTGCCAAATTCCAC
CCTACCCCCTACCCTGCCTAATATGCATCAAATTCCATCCATAGATCAGA
TCCCAGAAACCCAGCTGATTCCATCCTAACAAGCCAATCCCATCCTACCT
CTAGCCAATCCCTACCCTATAACCAGATGATTCAGTGTTGGCTGATTTTA
CCCAACTGATCCTCCTATCTATCCCATCATCCCAGTCCAGGCCAGATGAT
TGATCCCACAACAGCTCCCACAACATATTTTGTGGTCCAGCCCATCATGC
CATGCAGTCCAATGCCATGCAGGATCATCATCTGCAGTACCAATTGGACT
AATGCAATTTGCCCAACTGATATATGATCTGCCTAATCAATTCACCTAGC
CTGCCTAGGTAGGTGGTGTGATCACACGATCCTGTTGTCCATCCACCACG
CCACACATCGTCAGTCGGTTGTTTGTACCAGTTGATGATCTCCTCTCCCT
TGCCTCCTTTTTTGTGCCCCCAACTGATCCCACTTTGCTCAGACACCATC
ATGAGGTTACCTAATTGGAATTCCAACCTGAATCtaatctcataaccgat
caccattgctaaggcatatgatgatctgaaaagtttctccagcgaaattt
tacaaATCCGCGTTCGGGTCTGGGGAAGAATTATGACACGTGACCAGATA
CCGgtatctgattggatgaaagaaAGCGCGctaaatgtatttttttcgat
ggaaaatgaaagtgaaagtcaaaacaaaaaaaattttttttacaaacagC
TAACTGCTGTGTTATGGCTTTGATTTCCCTGGTAAATATTGAGGTGAAAT
GGCGACACCAAAGAAAAAAGCAGTACAAATTGGGACCTCTGAAATAAAGT
TTCAGTTAATTAGGCAGACGTGTATATTTTGTGGTGgcaattttaaaata
caaaaaataagcTCATATGAGACAGTTACACCTAATCTCAACTTGATTAG
AAATATTCTACCTGATGGTGATTCACTGCTGGAATGTGCCCAGTTCCAAA
AGTTAAGATTTTGCTCAAAATGTAAAACTAAATTAAAGAAGGTAGATACC
ATGGTATATCAACAAGCACAGTTCAAAGAGCAGCTTTCGGCAATAAAATG
TAAGTATTGACCTTTTTCTGCTACATATAGACCCACCAATTTTAGTTCAC
AGCCTTAGTCACCAGACGACATCTTCATTTATATAGACTTAAAGCTGTAG
ACGGTCTGGCCCTGGCAACCTTAACCCTTTgtcattttaaaaaaaaataa
gaaagatcGGATACAGCAGCAGTTATTGACCTTTCGCTAGGAAAGGTTTA
GCATACTGGTAAATCACATTTCGATGGATGCAAGGGAAACAACAATAATA
ACAAAGTTTCCCTTGCATCTTTTGGAAAGGCGGGGTTATGCTGGTGTTTA
TAATTATACAAAATGACATCACACCTAGCCgaaaggtctattgaaaaaaA
GCATACCCACATGGGATTATTTTTCAGCTCATTTTGAAGAAGAAATAACA
ACAAAGAGAATAGCAACACCAACTCAACCACTTTCAAGGAAACGAATTAA
CTTCAGCATCACTCCTCAACAAACGCcaacatcaaaaattttgcaaaaag
tcCAAAGTACTTCTAAAAAGTCCCCAGCACAAAAGGAACTAATGTCTCCA
CTTTCCAAAATTCCAAAAAGAATCCAAACTAAACCTCCCAAATCAGCAgc
aacgccacatagaagaacGCCACTTTCAGAAATCCAAACTATTCAAAGGA
GAGCAACAAAGATTCCACAAAGAATATTGATTGCCAATGAGAAGGAGGTA
ATAAAAGTAACCAGAgtgaatttattttattcaaaataggCCTACAAGGT
GATCCTAAAACCTGACCAATTTGGGAAACTTATTTTTCTATAAGTAAGAA
AttcctaaaaaattaaaaaaaaattggttctGAAATCCctgaattgattt
tttctgaaattctGAAAGACTGTTTATTGTTTGCTTAGAATGGTGTTATT
TTGACCGAGAAGATTCCATCAACTAGTAGAACAATAGCATACAATGAGGC
AAAGGTAACTTTTTCAGCTTTTTGTGAATTATAAGAACTTGCTAATTTCA
AAGACCTACTTTTTTTCTCTCTGGGGTTAAAATTCTAAGAAAATAGATTT
CGCTTTTAAAATTGTGTTAATGTTGatgtactaaaaggattttttgTCTT
TCCCTATTAGGTCATAGAAACAAATGAAGGTGGAAAAACGGTACAAAgaa
cattgaaaaagaattatgCCAAAATCGCCAAGTATCTTTCAACCAATTTG
ACCAGATTAGCTGCCAAAGCAATCTGTAATTCAGATGAATTGCTTATAGA
AGTTATTGAATGCATAGCAATGAAATGTCGAAGTGAGATTGATGGTTTGA
GTGGATTAAAACAGCCTAGTATTCTGCGAGACATCTCCCCAGAACACATC
AGAACAATAGACATTGCTCAAATGAGACTGGAATTTAGTAGTCGGGCCAA
AACTATGTTTCAGCTGTTAACACAGATTTTGTgctcaaatgaaaaagaag
caATCATATTACTAGCAACAATGGTTCATCTCGAAAAAAAACACCTGAGT
GCCTTTGCCCACAAACTCGGACTTGTTGCCCGAAAATGTGGAATGAATGA
GAATGTAAGTGTTTGGGACATGGGTTTGTATACATGTTTTATGATTATAA
GTCTAGAGATTGTATTAAATCAAATCTGAGTTTGTCACCTCACTAATTAG
ATTTCGCTGTAACattattaaaaaagatttaatatCTATGTTCATTTCAT
ACAGCAATTAATTCACACCTTTTGTTTGAAATAGAAGAATCATCTTTTCA
CTTTAAGCTATCTTGGCTGTCTGAGATCATCTGAGATTTCTTTATTTTGG
AAcctaaaaacaatagaattttttttggaattttcaatTAATGTGTAACC
GTTTAAGATTTTCCATGATTAAATTGATTAAATTAATGTTCAATGGGTTA
TTTTGAAGGGTCTTTCAATGTTGAATCACTTGGGATTAACAAGCTGCCCC
CTAACGATTAGAGAAAAGCTGTATGAACAAGGAATTAATCACGATGCAAG
ACTCTTgaattggattgaattggtaggtTTGATTTTATATTTGTGATTTA
GTGTGATAACTACTATCAATCAAAATTGATGGTTGTGACTTGTtaataat
tattttctttttttttcaaactgattAAAATTTCTCTTTCATAAAATTGA
ACAATACAAGTGACAATATCTTGTGCACTAATTAATTAAGATCTCCACTA
ATTTTCAGCTAAAGACCTTCCAGCTAATTATTGACAACTTGGACTTGAAT
ATCGGTGTCAAAcatcaaacaaataaaaacaaaacatccaCCTACCACTG
GGTTAATATGATTGCAATTGCTGATCCAGTGTTTGGTGACCACCTTAGCG
ATTTCCATCAGAGACACTTAGGAgatgtaaaaaataattgattatttttt
aagttttagtaCAGATAAAGAATTCCTTTCCTGTCAAAATATATCCAAAT
CCTTGTTACAGACTATATAATTAACCATACATTTGATTGATTTTAATAGC
TAAAGCAAACTCATTGACAAAGATGGACtaagattctcaaaattttaaaa
aatatacaataaattctttcaaatttttccatttaTGTAGGTGGACGTAA
ACGAATTTTTTCCCACTGAGTCAACAATCAAGTACCTCAAAACTGATTTC
ACTAATCTCTGTGCcagaattttggtgaaaagagTCAACAAACTTCATGA
TATCGCAGTCAAACATCACATTAATCACATTTACTCAGAAACTATGACAC
AAAAGTCTGAAGAGGTATCACttcaatatttcatttcataaaatattttt
ttatttaattatgaTTTCATTGTTAAAGATTATAATATCAAGGATTAGAG
TGCCAGGGTCTCTGTTGTAAAACACTGAACAATACAGTAAGAAATCTTTT
CATGATTAATGAAATCatcttcaaattcaattttaagATTCCACTTGGAG
TACTAACGCTAAACGAAAACAAGAACGAAGACATGTTAGAGATTTTGAAG
TTTCTTCAAGATAAATACGCAAAAAATGCAAAAGgaaataaaaacattat
cttTGTTGGTGGTGACCAGGTGaattaaatcaatttttataccttttaag
ataattatattgaataaaatgaaatcattctttaaattttaaaaaaagtt
cactcattgaatttctctttttcatTGTCAGTTGACAGAAGAAAGGGCGA
GAAACGTACTATTGTCACAACTCAACGGAAGGACAAAGGAACAGAGACTA
GAGGCTTTGTTTCCTAAATTTGAAGATTGGCATTGTATCCGGACAGCCTA
TGATGTAAgaataatgaaagaaatttttattagaGACATTATTTAGTAAG
AAATTACATAGATATGTTCTGCTTGTTCTTAATGTAGTACCGCTTTACAA
TATAAATAGTCTCATAATTCAATGCGGGTAATTtaattcttattttcatt
tttcagtcaGTCATCAAGATGCATCTTTCTGGAATGGATAAGGGTACGTA
CAAGTGCAACACCGTTCGCTCTGGTAACCCTAAAGCTCTTGGAGATATCA
AACAGAGATATGAACaaatcaaagaattttttctaatGCAATTGGAAGCA
TTGATTGTGTCTGCATTCCTAAAGCAAGAGGGTATGGAAACTGTTGATGA
CGACTGCGTTCCAAAGCATATCAAAGATGGTGATGCAAAAAAGCGATGGC
TTAATGGAAGGGTTTCTGTGATGATCGAAACTTATGTAATGCCTCATCTT
AGGTGAAATTCTAGTTTTTAGtttatattttgactttttcacaaaagtac
tttttgaaatattgacaGCTCAAACATAATACTTATCAGACCTTTAAGAC
TGAATTACTAAATATCTTGTGTAACTGTACTTTCTCAAGAAAATTTTCAC
CATAAAATCAGTATCCTCAATTTGCAAGCTGCATTCGTCAATTTGAAGAT
AAATTggcaaaaataattaaaagtcTCCAAGTGTATTTTTATGTATCCCA
TAACCATGAATTCTATCATTATAGAACCTTGTTGGAATCCATACAAAAGG
AAGGTGATAGCGAAAAGGAAGACAATGTTGGGTTAGAACGAGAATCGATA
ACTAAAGATTATACCAATAAANAAAGGAAGACAATGTTGCGTTAGAACAA
GAATCGATAACTAAAGATTATACCAATAAAGATTTGCAAAGCAAAGATAA
GCCTATCGAACCCTTCAAACCAACCCTAATTGCAGATGCTCGTACAAGAT
ACACTAATGTCAACGTGCTAACCAACTCACGTGTGCTACTATGCAGCCCT
AATGTTTTGAACGCCTTACGTTTAAAATCTTCAAGCCCTAGTGTGATGAG
AAATGCATGAGGAAGATTCTCTAACATAAAAATAATGGCCAAGCTGCCAA
CGTCCAAACCTAACCATCCTGCAAAACCACAACAGTCAACTCAGAGCAAT
GCAGCTATAAACCCAAAACAGACACCATTGTACATAGCTATCAAACAACA
AGATGCAACCCAGAGAAATGCAGCAGTCAATGCTAAACAGACGCCTGTTT
ACATAGCTATTAAACaagaacaatcaaaacaaaccaatgcTGCAGCTAAA
CAGACCCTACCTTTCGAAGTCGTTAAACAGCAAcaatcaaaatcaaccaa
cGCAACTATTAGCCCCACAAAGATTCCAAGGCTCGTAGTAGTTAAACAAC
AACTATCAACCCCAAATGTAGCTCTTACCCCAACAAAGACTCCATCATTA
CTGGCCGTTAAACATCCACTATCTACCCCAAAACAAGCTGTTAATCCCAC
AAAGATCCCAAGGTTTGTTGTTGTTAAACAACAACCATCAACGCCCAAAG
CAGCTGTTAGCTTCAAAAGAACCCCACCACTACCGGTCATTAGAAGACAA
CAATCAACCCCAAAGGCATCTGTTAATCCTACAACGATTCCACCATTGGT
AACGACTAAACAACAGCTACGGTCAACTCTAACCAATACTCCTGACACAA
CGTTTGTAGACACCGAACAAAAACAGTTGCCACAGAGCAATACTAAATCT
ACACAAAAAGATGATTCGTTGTTTAAGTATAGCTGTTCTTTGATGAGTTG
GGGTTTGTGTCTGTTGGATGCAGATGATGCAGTACGAGAAGGTGATGGGA
ATCGATTGATGAATGtatatgaaatttttcaattgctCTTCCGCATGATG
GGTAACACCAAATACAGTTATAGCCTTCTAAGATTGAAAGCTTGCAGGTT
GGCTCTCCTCACCCCTAAAACGGCACATCAACTTGTCTGGAACCGATTCT
TCAATAAAAACGGAGGAAAAGGTCAGAACATTTCACGCGATTTGAGATTA
GAGCATATTAATCGATTCATGAAAGAAATGATAAAAGCTCAAGGGCTACA
GAACATTTCAAATGATAACGTCTACAAAATTTCAAAGGCGTACCAAGGAA
TTAGAGAAATCTGTGATTCTATGCTGGTGGATACTGATGTTTCTAAATCA
GATGGACATCATTCAAACATTCACAAGAATGAGATGTTTAAATCTGTTTT
ACAGGAACTTAATGCTAATGAGAATTTTTCTACTCAACAACCAAATGAGA
TGCTTAGTACGCAATTTGAAAAGATGCAAGAAAATCGATCAcagaatttg
aaaacaatgATACCATGGATTAAGGGGCATAGGCGAGATTGGGATGTGCA
AAATGACTCTTTGTACAACTTtaaaacaattaattaaaactaaaaagtCT
TGACTGCACgctgttttgtatttttattataTTCTTAATATTTATTAACG
TGAAAACTATTCTTTTAGTTATTTATAGTTGTTTATATTTCATTGAGTTa
caaaatattatatttatcattagattatatatttattatatttattatat
aCACATCACTAGGAGACTTTAATTACTCTTCTCGTTATTTTTGCACTTCA
CCATCGTACTTATGAttttatactttattttttgtcgtttttatttcag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031809XLOC_031809Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050204-exon-scaffold_168-1491911889:34165..36311TCONS_00050204-exon-scaffold_168-1491911889:34165..36311Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1510915933:34165..36311TCONS_00050204-exon-scaffold_168-1510915933:34165..36311Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1575043694:34165..36311TCONS_00050204-exon-scaffold_168-1575043694:34165..36311Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1491911889:36503..36568TCONS_00050204-exon-scaffold_168-1491911889:36503..36568Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1510915933:36503..36568TCONS_00050204-exon-scaffold_168-1510915933:36503..36568Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1575043694:36503..36568TCONS_00050204-exon-scaffold_168-1575043694:36503..36568Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1491911889:36725..37168TCONS_00050204-exon-scaffold_168-1491911889:36725..37168Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1510915933:36725..37168TCONS_00050204-exon-scaffold_168-1510915933:36725..37168Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1575043694:36725..37168TCONS_00050204-exon-scaffold_168-1575043694:36725..37168Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1491911889:37523..37636TCONS_00050204-exon-scaffold_168-1491911889:37523..37636Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1510915933:37523..37636TCONS_00050204-exon-scaffold_168-1510915933:37523..37636Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1575043694:37523..37636TCONS_00050204-exon-scaffold_168-1575043694:37523..37636Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1491911889:37823..37990TCONS_00050204-exon-scaffold_168-1491911889:37823..37990Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1510915933:37823..37990TCONS_00050204-exon-scaffold_168-1510915933:37823..37990Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1575043694:37823..37990TCONS_00050204-exon-scaffold_168-1575043694:37823..37990Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1491911889:38205..38378TCONS_00050204-exon-scaffold_168-1491911889:38205..38378Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1510915933:38205..38378TCONS_00050204-exon-scaffold_168-1510915933:38205..38378Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1575043694:38205..38378TCONS_00050204-exon-scaffold_168-1575043694:38205..38378Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1491911889:38552..38683TCONS_00050204-exon-scaffold_168-1491911889:38552..38683Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1510915933:38552..38683TCONS_00050204-exon-scaffold_168-1510915933:38552..38683Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1575043694:38552..38683TCONS_00050204-exon-scaffold_168-1575043694:38552..38683Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1491911889:38796..38918TCONS_00050204-exon-scaffold_168-1491911889:38796..38918Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1510915933:38796..38918TCONS_00050204-exon-scaffold_168-1510915933:38796..38918Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1575043694:38796..38918TCONS_00050204-exon-scaffold_168-1575043694:38796..38918Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1491911889:39071..39366TCONS_00050204-exon-scaffold_168-1491911889:39071..39366Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1510915933:39071..39366TCONS_00050204-exon-scaffold_168-1510915933:39071..39366Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1575043694:39071..39366TCONS_00050204-exon-scaffold_168-1575043694:39071..39366Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1491911889:39639..41613TCONS_00050204-exon-scaffold_168-1491911889:39639..41613Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1510915933:39639..41613TCONS_00050204-exon-scaffold_168-1510915933:39639..41613Clytia hemisphaericaexon
TCONS_00050204-exon-scaffold_168-1575043694:39639..41613TCONS_00050204-exon-scaffold_168-1575043694:39639..41613Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_168supercontigscaffold_168:34165..41613 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.126571	0.700125	1.0111	0.696888	0.79091	0.659089	1.61652	1.12514	1.38999	1.23167	0	0	0	0	0	0	0	0	0	0	1.33358	1.38258	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050204 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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