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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050190 ID=TCONS_00050190|Name=TCONS_00050190|organism=Clytia hemisphaerica|type=transcript|length=1284bp
ATTAAGGAATGGTCGAAAATGGATCTGGATTTAACTTTTCCCAAACTTTG
TAAAAAAGCACTTCCCAATGCAGAACTTAGCTTAAATCCAAACTTGCCCT
GAAACTGTTTAAATTAGGGAATGGTCGAAAATGGTTCCAGATTTTACTCT
TCCCAAACTTTGTAAAAAAGCGCTTCCCAATGTAGAACTTAGCTTGTCCA
AAATTGTCCTGAAACTGGCTAAATTAGGAAATGATCGAAAGTGGATCTGG
GTTCTACTTTAAAGCACGTTTGAAATGCAATGTGAATATAGGTTTCTTGC
TTGTTTCTATAATATCTAAAATACAATTATATTGAAGAAcgattttattg
aaataaagtAACAAATACAGTCTTGAGCAATTTTAATACATGTCCAGAAA
ATATATCCCCAACCATTTACGTGTTTTACGTGTTTACATAGATTTAAAAT
TTCTAACGACATCCACAGAGAACCTTTAGGAAAAGATGAATCCATGAATA
GCTCCATAGCTCCTGTAGTTCagtacacgtttgttttttattagaaccca
gtttataagaacattgaggctgaaattcgtcgaaaaatcaagaacatcgt
aagaacatgcccagcctcaatttggaaaaaaatgacaagaaactacaatt
ttttcctcttttcaagcagttttgacccaacttaggcatggattttctaa
aatcgagagtcaaattttgttcaaattgcaccaattttatatgctcttta
ttttgcatgatattgtcgatttagaatagtctgaaaaattaagaacgcat
ttaagaacatttaaggctgaaaattgctaaaataataagcacatccaggc
tcagccaaattttaggtgttctaataaaaaaaaaaagtgtatcgTTCAGC
AACTGACATAACTTCCATTCTCCAttgatttttgcaattttcaagCAAAG
CTTTCTCTGTAAGTCGGTGGTTTACTACGTCATCTCAGTCATCTTGTCGA
TTTTTACATTGTCTTCAGTCAATAACATTAGCTAGTAATTTGATAATTAG
CTAGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAGCTAGTAATTTGTATAATTCTCATCAAGGAACTGAAAATATCGAT
ACAaccaaatttctttttccaaCCAAGATATTGCGAGCCAATGATGTCGT
TTTGCCGTCTTTCTTTGTTTCCATAATAGTATTTTGCTGAATTTTTACGG
TAATATTATCTAATCTAAAGagcaaaataaaaat Run BLAST on NCBI transcript from alignment at scaffold_167:1463514..1464797 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050190 ID=TCONS_00050190|Name=TCONS_00050190|organism=Clytia hemisphaerica|type=transcript|length=1284bp|location=Sequence derived from alignment at scaffold_167:1463514..1464797 (Clytia hemisphaerica)
atttttattttgctCTTTAGATTAGATAATATTACCGTAAAAATTCAGCA
AAATACTATTATGGAAACAAAGAAAGACGGCAAAACGACATCATTGGCTC
GCAATATCTTGGttggaaaaagaaatttggtTGTATCGATATTTTCAGTT
CCTTGATGAGAATTATACAAATTACTAGCTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTAGCTAATTATCAAATTAC
TAGCTAATGTTATTGACTGAAGACAATGTAAAAATCGACAAGATGACTGA
GATGACGTAGTAAACCACCGACTTACAGAGAAAGCTTTGcttgaaaattg
caaaaatcaaTGGAGAATGGAAGTTATGTCAGTTGCTGAAcgatacactt
tttttttttattagaacacctaaaatttggctgagcctggatgtgcttat
tattttagcaattttcagccttaaatgttcttaaatgcgttcttaatttt
tcagactattctaaatcgacaatatcatgcaaaataaagagcatataaaa
ttggtgcaatttgaacaaaatttgactctcgattttagaaaatccatgcc
taagttgggtcaaaactgcttgaaaagaggaaaaaattgtagtttcttgt
catttttttccaaattgaggctgggcatgttcttacgatgttcttgattt
ttcgacgaatttcagcctcaatgttcttataaactgggttctaataaaaa
acaaacgtgtactGAACTACAGGAGCTATGGAGCTATTCATGGATTCATC
TTTTCCTAAAGGTTCTCTGTGGATGTCGTTAGAAATTTTAAATCTATGTA
AACACGTAAAACACGTAAATGGTTGGGGATATATTTTCTGGACATGTATT
AAAATTGCTCAAGACTGTATTTGTTactttatttcaataaaatcgTTCTT
CAATATAATTGTATTTTAGATATTATAGAAACAAGCAAGAAACCTATATT
CACATTGCATTTCAAACGTGCTTTAAAGTAGAACCCAGATCCACTTTCGA
TCATTTCCTAATTTAGCCAGTTTCAGGACAATTTTGGACAAGCTAAGTTC
TACATTGGGAAGCGCTTTTTTACAAAGTTTGGGAAGAGTAAAATCTGGAA
CCATTTTCGACCATTCCCTAATTTAAACAGTTTCAGGGCAAGTTTGGATT
TAAGCTAAGTTCTGCATTGGGAAGTGCTTTTTTACAAAGTTTGGGAAAAG
TTAAATCCAGATCCATTTTCGACCATTCCTTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050190-exon-scaffold_167-1491911889:1463514..1464797 | TCONS_00050190-exon-scaffold_167-1491911889:1463514..1464797 | Clytia hemisphaerica | exon |
| TCONS_00050190-exon-scaffold_167-1510915933:1463514..1464797 | TCONS_00050190-exon-scaffold_167-1510915933:1463514..1464797 | Clytia hemisphaerica | exon |
| TCONS_00050190-exon-scaffold_167-1575043694:1463514..1464797 | TCONS_00050190-exon-scaffold_167-1575043694:1463514..1464797 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:1463514..1464797 . |
Blast
The following BLAST results are available for this feature:
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