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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050161 ID=TCONS_00050161|Name=TCONS_00050161|organism=Clytia hemisphaerica|type=transcript|length=982bp
tcaaagatgaaaacAGTTTTTCGGGTATTTCTTTATTTATTACAACttta
aaataagttaaaatattttgtcaagTTAAAGTTGAACCCAGTAAAGTTAA
AAGATGGAAATTAATATATAGATACAATTAAAACACGAACAAGGTATGGT
AAAACTCTAGAAAATTAATAAGTAAAATAAATCCATCCGTGTAGCCAGAG
AGTGGTATGAAAATCAAGAGGCTAGTTAAGGGCAACGCCCTTTtgttaag
aaaaaataaataattagtCACCTTTATTTACAATAAACATTAAATTGTAA
AAACACCGAAAATAATGAATAGCTTTTTTCATCATATACAGTAAaccttt
tttgataattttttttgaccaaTTCCTTTGATAATTAAGTAATTTTTATA
ATCAAATACTGcattttcaagcttttttatattaaCTAAAAAAGTATNGT
AATTTTTATAATCAAATACTGcattttcaagcttttttatattaagtaaa
aaagtaaattatATGTACAATGCAAAAAGCAGAACAAACTACTTTTTGAC
TTATGTCGGGTGCCAATTAAGAGGATTTAGTATGGAGCAAAAAACAATGG
TGTTCTAGGTCCAGATCTGTACATGACTCTTCGGTCAAATTCTTCTTGAT
CTTCTTTGGTTTTAATGTTCTTTCGTTCTTTGTTCAATAAAAACATATCA
AGCGTTAAAACACCAGCAGCGGCGCATGAAATGACAACAATAGCTACGAT
AGCAGTTGCGGCAACCATTTTGGATGAGAAGCACGTTTATCAATTATTTG
GAAAGGTGGTTTTAGTTGTTGAATCCCAATGGAACTACGTTTGATAAACA
GATTTTATCTTGACCTGACCGGTTTATTCGTTCTTATTAGATgatttttt
aataatatttcaGGTATTTgctaaaatgagaaaaaaaatcattattaaaC
AAACCCTGAACAATAGAAAAGTCTATAGACTT Run BLAST on NCBI transcript from alignment at scaffold_167:475869..476850 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050161 ID=TCONS_00050161|Name=TCONS_00050161|organism=Clytia hemisphaerica|type=transcript|length=982bp|location=Sequence derived from alignment at scaffold_167:475869..476850 (Clytia hemisphaerica)
AAGTCTATAGACTTTTCTATTGTTCAGGGTTTGtttaataatgatttttt
ttctcattttagcAAATACCtgaaatattattaaaaaatcATCTAATAAG
AACGAATAAACCGGTCAGGTCAAGATAAAATCTGTTTATCAAACGTAGTT
CCATTGGGATTCAACAACTAAAACCACCTTTCCAAATAATTGATAAACGT
GCTTCTCATCCAAAATGGTTGCCGCAACTGCTATCGTAGCTATTGTTGTC
ATTTCATGCGCCGCTGCTGGTGTTTTAACGCTTGATATGTTTTTATTGAA
CAAAGAACGAAAGAACATTAAAACCAAAGAAGATCAAGAAGAATTTGACC
GAAGAGTCATGTACAGATCTGGACCTAGAACACCATTGTTTTTTGCTCCA
TACTAAATCCTCTTAATTGGCACCCGACATAAGTCAAAAAGTAGTTTGTT
CTGCTTTTTGCATTGTACATataatttacttttttacttaatataaaaaa
gcttgaaaatgCAGTATTTGATTATAAAAATTACNATACTTTTTTAGtta
atataaaaaagcttgaaaatgCAGTATTTGATTATAAAAATTACTTAATT
ATCAAAGGAAttggtcaaaaaaaattatcaaaaaaggtTTACTGTATATG
ATGAAAAAAGCTATTCATTATTTTCGGTGTTTTTACAATTTAATGTTTAT
TGTAAATAAAGGTGactaattatttattttttcttaacaAAAGGGCGTTG
CCCTTAACTAGCCTCTTGATTTTCATACCACTCTCTGGCTACACGGATGG
ATTTATTTTACTTATTAATTTTCTAGAGTTTTACCATACCTTGTTCGTGT
TTTAATTGTATCTATATATTAATTTCCATCTTTTAACTTTACTGGGTTCA
ACTTTAActtgacaaaatattttaacttattttaaaGTTGTAATAAATAA
AGAAATACCCGAAAAACTgttttcatctttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050161-exon-scaffold_167-1491911889:475869..476850 | TCONS_00050161-exon-scaffold_167-1491911889:475869..476850 | Clytia hemisphaerica | exon |
| TCONS_00050161-exon-scaffold_167-1510915933:475869..476850 | TCONS_00050161-exon-scaffold_167-1510915933:475869..476850 | Clytia hemisphaerica | exon |
| TCONS_00050161-exon-scaffold_167-1575043694:475869..476850 | TCONS_00050161-exon-scaffold_167-1575043694:475869..476850 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:475869..476850 . |
Blast
The following BLAST results are available for this feature:
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