TCONS_00050104 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050104
Unique NameTCONS_00050104
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1048

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050104 ID=TCONS_00050104|Name=TCONS_00050104|organism=Clytia hemisphaerica|type=transcript|length=1048bp
TTAGCTAttacaattaaaaaagactAGATTCCAGTCTAAAAACAAATGGA
ACAAAAACCAAGATCTCGAAATTTCTGCCGATCACTGTtacaaaaattga
cgtcacaattttcaaaaacagtTTGAGACACTTGCACGACTTCATTGTga
ccaaagaaaaaaaaacatcaacacACAACATACACAAGACTAGTTTGATT
GCAAAGATTTATCagcaaaaaggaagaaaaatgaGGCCTGAATTGGGTGC
TCAAATTACGCTATCTTTTCTGGCGCATCTCAGCATATTCTTTGTGGCAA
ATCAGTTCCTAAACTCGTCAGAGTTTCCACGTTTCGATATCGCAATCAAC
ACAACACAAATTACAGACTCTAGCATCACCGTTTTCTGGAAGATCACCAA
AGATAGCCCAAACATTGAACTAATTAAAACTGCTTATGTCAGCATTTACA
GTTTAGAAATTGAAGATTTGACTTTCCGATCAAGACCTTTCAATAACATA
ACGTATGGCGAGTATCGGTTAACAAATTTACAACCCAAAATGAAATACAA
TATTTGCATTATTTTGCGGACCCTGAATGAAATGGAAGTGAGCAAATGTG
TTGGTGCAAAGACAGGAATCATATCAACAGGATCTCGTTTCAAGTTGTTA
CACGGGCTAACGTCGACAGGAGGTGGACACACCGGTCAAATCATTTTCTA
TTTGTTGCTTGTGGGAAGCGTCTTTTTCGGAGCATCATACTTTTCGTACC
AAATCTACAACAATGCACTGAATGGCGGTAGACGGAGACGAGGAGAGACT
GTTGGAAAAGAAATGAGCTTTGTTTCGTTCAGTGACATGTGCACTGAAGG
TGATGACGGAGATGATGATTTTGATGTCAATATTAGAAGaCAACAAATGG
AAGAACCACTCATCACCGAGGAAGATAAAGAAATCAACACTCTTTAGTGA
GTGAAGCCAGACTGAAGGACTCCGTGTCGCCAATGGACCTCTCGTTGCCT
AGTTATTTTGTAAGATATGTTTATTAGGGCTAAAAGTGTATTTACAGG
Run BLAST on NCBI

protein sequence of TCONS_00050104-protein

>TCONS_00050104-protein ID=TCONS_00050104-protein|Name=TCONS_00050104-protein|organism=Clytia hemisphaerica|type=polypeptide|length=238bp
MRPELGAQITLSFLAHLSIFFVANQFLNSSEFPRFDIAINTTQITDSSIT
VFWKITKDSPNIELIKTAYVSIYSLEIEDLTFRSRPFNNITYGEYRLTNL
QPKMKYNICIILRTLNEMEVSKCVGAKTGIISTGSRFKLLHGLTSTGGGH
TGQIIFYLLLVGSVFFGASYFSYQIYNNALNGGRRRRGETVGKEMSFVSF
SDMCTEGDDGDDDFDVNIRRQQMEEPLITEEDKEINTL
Run BLAST on NCBI

transcript from alignment at scaffold_167:1229898..1236668-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050104 ID=TCONS_00050104|Name=TCONS_00050104|organism=Clytia hemisphaerica|type=transcript|length=6771bp|location=Sequence derived from alignment at scaffold_167:1229898..1236668- (Clytia hemisphaerica)
TTAGCTATTACAATTAAAAAAGACTAGATTCCAGTCTAAAAACAAATGGA ACAAAAACCAAGATCTCGAAATTTCTGCCGATCACTGTTACAAAAATTGA CGTCACAATTTTCAAAAACAGTTTGAGACACTTGCACGACTTCATTGTGA CCAAAGAAAAAAAAACATCAACACACAACATACACAAGACTAGTTTGATT GCAAAGATTTATCAGCAAAAAGGAAGAAAAATGAGGCCTGAATTGGGTGC TCAAATTACGCTATCTTTTCTGGCGCATCTCAGCATATTCTTTGTGGCAA ATCAGTTCCTAAACTCGTCAGGTAAGATAACACGAAATATTTCCTGTTTT GGATAAGGAAAAAAAACTACTACTGCGACTAATCGTGTAGTCTTATTGTA TTAGATCTTTATTATTCCATGGGATTATTGCATCTGAATGCAACCGCAGT CTTTAAAAGTACTATTTAATTCGATTTCTTTTTTCTTGCAGAGTTTCCAC GTTTCGATATCGCAATCAACACAACACAAATTACAGACTCTAGCATCACC GTTTTCTGGAAGATCACCAAAGATAGCCCAAACATTGAACTAATTAAAAC TGCTTATGTCAGCATTTACAGTTTAGAAATTGAAGATTTGACTTTCCGAT CAAGACCTTTCAATAACATAACGTATGGCGAGTATCGGTTAACAAATTTA CAACCCAAAATGAAATACAATATTTGCATTATTTTGCGGACCCTGAATGA AATGGAAGTGAGCAAATGTGTTGGTGCAAAGACAGGAATCATATCAACAG GTTTGACATATTTTATTTCTAGGATTTTCTGGACTAATCTATTCTGGAGT GACCTGATTCTGGAGTAACCAGAAACTTTTATCAACCCTTATTTGAACTA AATATGACAAAACAAGAATGGGTAAAATTGTGAAAGAGGGTGCTTGTAGT AAACCACAGTAGTATTATTATACTACTGTGGTAGTACTACTGTGGTACTA CTGTACTATATTAGTATTAGTATTATATGAGAATCAAAATGCAAACATAT CATAAATCTTCCGGCTTTCTGCAAGTACTCCCAATCTACAAGTACACCTT ACGCAGTTCACTTTTAAAAAGTCTGAGTCGATCAGTTTTAAATTCTTTTT GTTCCGTCAATCAATCTGACGACTGATCAAAAAAATGCTTTTCCGTGTTT TTGTTTTTCATATTTTGCGAAAGAAATCACGTTTTAAACCACTACCATTG ATAGTTTCAAACAACTAACTCGATATTAAGCGAACTGCTTATACTCATCA GTGCAGTCAAAACTTTTCTAGTGACAAAGGTTTATACCAATAAATTAGAC CAACGCAGGAAGCTATAGTCAGGTTGATAGCAGTACTAAAATAATAGGCT TCTGCTCATCCTCTAGAGCTTCTTTATAGGAGATATAGAGGCCTGTGATT TCGACTACTAAAAGACACTTTTTTCTAATACTTGATTGTGACATATGAAT CAAAGTAGACACGTCATAGAGATTTTAAAAACCCATTTGCGAAAACCCAA AAGCGATTGCAATATAGTTTTCGAAATAGAGAGCAGGAAAAGGGATACTA CTTCAGAGTAATATTTATTGTTTACTATATGAGAGAGAAGAGGTGGAAAA ACGAAGAAGAAAATAAAACATTTTGATTAAAAAGTTGAAAGTTTGAGAGT TGTTTGAAGAGTTTTTTCGTTGAAGAAACGTCATCGCTTGTCGAAGGGGG GAGGTGGGCGAAACCCATCAAAAGACTCTCTCGATAAACTCCTTCTTTCC TCTCTTTTGATTACGAAATCGTTTAAAATTGAAGAATGAAAAGTCTAGAA CGGAGGCTGGTCGCAATGAAGTCAAAACTATTTTAACTTTAACTTCACCT TTTCTGGTGGTCAGGAAATATTTCAACTTGCCTCACCTCACAGTACTTTT TCCAGAATCATGTGATCAATTCTGAATCAACCAGAATCTTAGGATGTGGT TTTCAATTTGAAATGACTCTTTGGAATAAAACTGTTTCTAATGTACTACT ATAGCTTACATACAAGAAATGTCAATGCCTATAATGCTTATGCATACAGG TGGAAAAAATTGTACTCCTGTTTAGACTAAAGCCATCGGCAAGTCACCAG TCATCATGTCAATGCCTATATGAAACATTCTTACTCCCGTCTCGGCTCGA GCCCTCAGTTAGGCTGCACACATCCCCTCTGATAAGTTTTGATATGTTAT ATCAAAACTAATTTGGGGATGCATGCAGCCTAGCCCTCAGTAAGTTACTA CTTCCCAATGCCCTCTGTGCTCATGTTCGCTAAACATAAACAACACAAGT GTTATTTTTATTCTTATTCCATAGGATCTCGTTTCAAGTTGTTACACGGG CTAACGTCGACAGGAGGTGGACACACCGGTCAAATCATTTTCTATTTGTT GCTTGTGGGAAGCGTCTTTTTCGGAGCATCATACTTTTCGTACCAAATCT ACAACAATGCACTGAATGGCGGTAGACGGAGACGAGGAGAGACTGTTGGA AAAGAAATGAGCTTTGTTTCGTTCAGTGACATGTGCACTGAAGGTGATGA CGGAGATGATGATTTTGATGTCAATATTAGAAGGTTTGTTTACGTGATAA TATTCTATTATATTCATGGTATGTACCATTATTGCAATGTCTTTTGACAT TACATCGCGGACCCTATAGCTGATTGGTTGTAAGTGACGTAAAATCACTC AATACGCCACTTCTAACCAATCAACTGTTGGGTCCGTGGAAGACTAATTT GTTCCACCCTCTACTAAAACCTTTTTACAAGAATAAAAACAGTGGTCGTC AGAGTTCGCAAAATTTTTAGACGGAAAATGGTAAAAGAAATTGTCCACAA AAAACCATCTTACGATTCCCAAAGAGAACTTGAAAGCCGAGATTATGGAT TTCCCGTTTTTCTGATATCTAGAATAAGAGAAACAAAAATAGTCAAATGC TTACTTCATTTTGAGGTTTTCTTTTTAAAGACAGGAGCTTACGTTTTAGC GGTAATTGACACACCCATAAAGATTTGACTGGTCATGTAAAGGGTATTTA AAACTTATTAAAAACCTATAAATATCTTCTCAAAAAAGAGCTTTAAAACA ATCACCAGAAAATCAGGTTACGGTAACGGCCACATCGCGCTTGAAGGTTG AAACGAAATAAGCTCTGTGGCACACTTTTAGTCCCTGTATATTCAAAGAA CAGAAGACCCTCTTTTGATCTCCATGTAATGACTTCTTTCAATCTTTTCA AGCAAGGATTTTAACTGCCAGCTTTCTGCCTACTCAAAAAATTGGAAAAG CAGGGAACAAAAGCTATTCTCTTAGTCAATATTAGGAACTAACATCAACC TATTAAGAAGCTTCATTTCGATTCGAAGCCATGTGCCTAGTGTACCTCGT GTATAAGCAGATTTATGTATATAGCCTTTTAAGGAGGGCGAAGATCTAAA GGAGGAGTTCCGACAGAAACGCAAAATCAATCAGAGTTAGTCAATCAAAA ACTAACCGTCTCCATCGCAGAAAAACACAGAAACATACACACTCGCTACT TCCAACTCAAGTGAACTTTCACCATAACGAGAATTATGTTCCGTTGGAGT TTTTTTAAATCTCTCCAAAGAAAGTAAGTTACACAGCGTGACCTCTCGAT AATAAAGTTACAAAACAAAATGGTGGTCAGCCAATAAAATTGCGATATTG ACCTTCGACCTTGCGAATTACGTGATAGACCCTATGTGTGATCAAAGTGC GTCGTTCATCCAAGTAAAAAACACTCATCCAAGTGAAAAAGAAATCAGTA AGGTTTCCTCGTTAAAGAGATCCAAAGCCCACGAAAACATCTTTAGTACA AGCATGTAGCAAGTACAACACAAAATACGAGTCTATATAAAAAATAAAAA TACTTTCTTTTACAAAGTCTTAGATTAGAAGAATTACGTAAACTAGGGGG AGAAGAAAAACCAAGAGATTTCAAAACCACAGAATCTCGATGATGACATT TTTGGATGATCACTCACTTATGCTTTTCATACAAAACTCTGTTGAAATTG TCTAGATAACTCTTAAGTAGAGCCCAGTAAAGCTATTGTACATTGCACTC CCCATAGTTCGAACCTCTATAACTCGAAATGTTCCTTCAGTTAAAAATGT CTTATAAACTAGCCTCAACAACTCGAAATTTCCTCAACTCGAATAAAGTT GTGTACCCCGTGCTTGTTTGAGTTATAAAGCCCCCCTGTAGTATTTTTGT TTGGGTGATAGAGGCAACAGAAATTTTCCCCATCATATTAGAGAACGTAT TACTTCGACAAACCTTTAAGGATTATCTCTCTTTTTGGCGCTGTAACAAA AAATCTCAGAGATACAAACATCATCACTCATGCATTATTCATCATACTGG CGAAGAAATACTTCAGAAAAAAGAGGAAAAAAATAAAGATATAGATTTCA GCCTTAAAATTTCACTATGTATATTATATTACATAGTATTGGAATATCAG TCTCGAGTGGTCCCTAAAATAAGGACATCAAAAAAGTTTGTCTGAGTAAT ACAACGCCAATCACTCCCATATTATTTTTCTTCCCAGCCCATCATCGTAT CAATTCAAGTGATATCACCTTACACTCTATTCTCTTCTTTCTCTTATATT TTCAGTAGAGCAGAAATCTTTCACTTGAAATCGAAAAAAATCTCCAGTTT TTTCTCTCTTCCCCCCTCTCTCTTATTTTTATCTGGGAGTAGGAGGTAAG ACGTATAAAATCTTGAACTGTTTTATCTGGTAAGTGGGCGGGTGACGTCA CATAATCACAACAAGAGATGTCTCAATATTTTGATCCGATGAAAACACTC CGTGTTTAGTCTGTTTCTTATTTAGGACATTACTCTTCTTGGCCTCAAAA CATCTCTGCTTCACTGACTTTTATATATCCCTGGACCAAGCTATATCCGC CATCTTTGATCGATATTTTTTGCATCGGTACCCGTAAAGAAGCCATTGCG GTGTTATAAATTAACGTCTAACGGCGCTACATCATCAAAAGTTTTCGAGG GAAAGTAGATCCATCGCCCTCGATGCATTTACACCGCTATTGAGTAGTCC CATTAGGGTACCACTTTTCAAAAAAAAACTCCGATCAAAGATTTGGCTTG GTCGGGATTGAGAAACTTGGTCCAGGTTATACAAAGGTCAGCCCTGCTTA GGACAAAAGTAGCACTAAAGGACTCAGGACAAAACATTGAAGAAGTAAAC TATAAAACAGAAAGGGTTGAAAAACAACGAATCTCGAAATATCTCTATTT ATTCCAAATAAAATTTCTCTGATAACCGAATAGTTCCAATTCATATACGC GCATTGCATCGCTTAGTTCTTACTTTCAAAGTTCAAAGACTCTTACCAAA TAAGCCACCCTACCAAATACTGTTTACAAAAATCCAAAACATTAGCCTGT CACCACACTTTACTCCGGTAAGCAAAAACAGCGCACAGTGTTTCAAAATG GTTTCCGGGTCAATGGATCTATTTGCCTCGAAGGAGAAACTTTCTATGAT AACGGTGTTCCTATGATAACAGCAGACTTAACCACACAACGTCAATGTAA TTCAATAATCAAGTTGTGAAACAGAGGAAAGAAAGAATCCTTGTTCTTTA CCATTGACAAGAAATTTTATCTCAGATAAGAAAATAAAACCTAAACATAA ATAAATAAGAGTACCTTTTTACTGTGCTCCAAGTGCGGTTTATGAAACAA GTTTGTTACTAAAGAAAATGAAAGAAGCATTTTAAGAAATTTCGATAAAG CCAGTCCCCCGGTGCTAGGGGAAATTTTGCAAAAATATCGCGAAAGGAGC GAGCGCGAAATTTTTTTCGATATTTCTCCATTTTCTAGGGCTAAAAACTG CCATTTGTATGGTAAAAAGGGGAAAGAGGCGCTGAAATCAGTGTTGTGAA AAGCCTTTTTGCGCCCCCCCCCTAAAAAAAAAACACGAAAAAAACACCAC GCTAATGCACATATCCTCTTCCAAAGGTCAAGATGTCACAAGATGATCTG TGAAAGTTGGCATTTTAAACTTTCTAGCAAGGACATTTGACTAAAACGGG CTCTCTTGTTTCGTCTGAGGCCCAATTCAACTTGACGGAGAATATGTATC CGTGTTTAACTTAACAATCTGGCAGGGAGGGAGCGCTATGGACCCGTATA AGGAATACCAAAGAAGAAGGAAATTTCACAGCCGTAATGAGTAACCAGGA CCACTGCACGCTAATGACGACTTACTATTGGTCCAAAATTTTGAAGATTT TTGCGTCTATCCAACCGGCAGTCGTTACTAGAGCGCAACCAGTCCTGATT ACCCAGGATTCATTTCGACTGTGAAATAGCATATACTATATCATTATTGA AACTTCCAAAGCACAAGCTTGAAAATTAACCATACCTGTTCATTTTCAGT TCATGCCTTTGTAAACGAACAATCAGGTGCATCCAGTCTAAAAGGAAAGT CAAAGTTGTGAGTGATTGGTCTAGAAACTGCACTTTATTGAATTCATTTT CTCTTTATTTAGACAACAAATGGAAGAACCACTCATCACCGAGGAAGATA AAGAAATCAACACTCTTTAGTGAGTGAAGCCAGACTGAAGGACTCCGTGT CGCCAATGGACCTCTCGTTGCCTAGTTATTTTGTAAGATATGTTTATTAG GGCTAAAAGTGTATTTACAGG

Coding sequence (CDS) from alignment at scaffold_167:1229898..1236668-

>TCONS_00050104 ID=TCONS_00050104|Name=TCONS_00050104|organism=Clytia hemisphaerica|type=CDS|length=2868bp|location=Sequence derived from alignment at scaffold_167:1229898..1236668- (Clytia hemisphaerica)
ACAACAAATGGAAGAACCACTCATCACCGAGGAAGATAAAGAAATCAACA
CTCTTTAGGATCTCGTTTCAAGTTGTTACACGGGCTAACGTCGACAGGAG
GTGGACACACCGGTCAAATCATTTTCTATTTGTTGCTTGTGGGAAGCGTC
TTTTTCGGAGCATCATACTTTTCGTACCAAATCTACAACAATGCACTGAA
TGGCGGTAGACGGAGACGAGGAGAGACTGTTGGAAAAGAAATGAGCTTTG
TTTCGTTCAGTGACATGTGCACTGAAGGTGATGACGGAGATGATGATTTT
GATGTCAATATTAGAAGAGTTTCCACGTTTCGATATCGCAATCAACACAA
CACAAATTACAGACTCTAGCATCACCGTTTTCTGGAAGATCACCAAAGAT
AGCCCAAACATTGAACTAATTAAAACTGCTTATGTCAGCATTTACAGTTT
AGAAATTGAAGATTTGACTTTCCGATCAAGACCTTTCAATAACATAACGT
ATGGCGAGTATCGGTTAACAAATTTACAACCCAAAATGAAATACAATATT
TGCATTATTTTGCGGACCCTGAATGAAATGGAAGTGAGCAAATGTGTTGG
TGCAAAGACAGGAATCATATCAACAGATGAGGCCTGAATTGGGTGCTCAA
ATTACGCTATCTTTTCTGGCGCATCTCAGCATATTCTTTGTGGCAAATCA
GTTCCTAAACTCGTCAGACAACAAATGGAAGAACCACTCATCACCGAGGA
AGATAAAGAAATCAACACTCTTTAGGATCTCGTTTCAAGTTGTTACACGG
GCTAACGTCGACAGGAGGTGGACACACCGGTCAAATCATTTTCTATTTGT
TGCTTGTGGGAAGCGTCTTTTTCGGAGCATCATACTTTTCGTACCAAATC
TACAACAATGCACTGAATGGCGGTAGACGGAGACGAGGAGAGACTGTTGG
AAAAGAAATGAGCTTTGTTTCGTTCAGTGACATGTGCACTGAAGGTGATG
ACGGAGATGATGATTTTGATGTCAATATTAGAAGAGTTTCCACGTTTCGA
TATCGCAATCAACACAACACAAATTACAGACTCTAGCATCACCGTTTTCT
GGAAGATCACCAAAGATAGCCCAAACATTGAACTAATTAAAACTGCTTAT
GTCAGCATTTACAGTTTAGAAATTGAAGATTTGACTTTCCGATCAAGACC
TTTCAATAACATAACGTATGGCGAGTATCGGTTAACAAATTTACAACCCA
AAATGAAATACAATATTTGCATTATTTTGCGGACCCTGAATGAAATGGAA
GTGAGCAAATGTGTTGGTGCAAAGACAGGAATCATATCAACAGATGAGGC
CTGAATTGGGTGCTCAAATTACGCTATCTTTTCTGGCGCATCTCAGCATA
TTCTTTGTGGCAAATCAGTTCCTAAACTCGTCAGACAACAAATGGAAGAA
CCACTCATCACCGAGGAAGATAAAGAAATCAACACTCTTTAGGATCTCGT
TTCAAGTTGTTACACGGGCTAACGTCGACAGGAGGTGGACACACCGGTCA
AATCATTTTCTATTTGTTGCTTGTGGGAAGCGTCTTTTTCGGAGCATCAT
ACTTTTCGTACCAAATCTACAACAATGCACTGAATGGCGGTAGACGGAGA
CGAGGAGAGACTGTTGGAAAAGAAATGAGCTTTGTTTCGTTCAGTGACAT
GTGCACTGAAGGTGATGACGGAGATGATGATTTTGATGTCAATATTAGAA
GAGTTTCCACGTTTCGATATCGCAATCAACACAACACAAATTACAGACTC
TAGCATCACCGTTTTCTGGAAGATCACCAAAGATAGCCCAAACATTGAAC
TAATTAAAACTGCTTATGTCAGCATTTACAGTTTAGAAATTGAAGATTTG
ACTTTCCGATCAAGACCTTTCAATAACATAACGTATGGCGAGTATCGGTT
AACAAATTTACAACCCAAAATGAAATACAATATTTGCATTATTTTGCGGA
CCCTGAATGAAATGGAAGTGAGCAAATGTGTTGGTGCAAAGACAGGAATC
ATATCAACAGATGAGGCCTGAATTGGGTGCTCAAATTACGCTATCTTTTC
TGGCGCATCTCAGCATATTCTTTGTGGCAAATCAGTTCCTAAACTCGTCA
GACAACAAATGGAAGAACCACTCATCACCGAGGAAGATAAAGAAATCAAC
ACTCTTTAGGATCTCGTTTCAAGTTGTTACACGGGCTAACGTCGACAGGA
GGTGGACACACCGGTCAAATCATTTTCTATTTGTTGCTTGTGGGAAGCGT
CTTTTTCGGAGCATCATACTTTTCGTACCAAATCTACAACAATGCACTGA
ATGGCGGTAGACGGAGACGAGGAGAGACTGTTGGAAAAGAAATGAGCTTT
GTTTCGTTCAGTGACATGTGCACTGAAGGTGATGACGGAGATGATGATTT
TGATGTCAATATTAGAAGAGTTTCCACGTTTCGATATCGCAATCAACACA
ACACAAATTACAGACTCTAGCATCACCGTTTTCTGGAAGATCACCAAAGA
TAGCCCAAACATTGAACTAATTAAAACTGCTTATGTCAGCATTTACAGTT
TAGAAATTGAAGATTTGACTTTCCGATCAAGACCTTTCAATAACATAACG
TATGGCGAGTATCGGTTAACAAATTTACAACCCAAAATGAAATACAATAT
TTGCATTATTTTGCGGACCCTGAATGAAATGGAAGTGAGCAAATGTGTTG
GTGCAAAGACAGGAATCATATCAACAGATGAGGCCTGAATTGGGTGCTCA
AATTACGCTATCTTTTCTGGCGCATCTCAGCATATTCTTTGTGGCAAATC
AGTTCCTAAACTCGTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031720XLOC_031720Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050104-exon-scaffold_167-1575043694:1236348..1236668TCONS_00050104-exon-scaffold_167-1575043694:1236348..1236668Clytia hemisphaericaexon
TCONS_00050104-exon-scaffold_167-1575043694:1235869..1236177TCONS_00050104-exon-scaffold_167-1575043694:1235869..1236177Clytia hemisphaericaexon
TCONS_00050104-exon-scaffold_167-1575043694:1234036..1234294TCONS_00050104-exon-scaffold_167-1575043694:1234036..1234294Clytia hemisphaericaexon
TCONS_00050104-exon-scaffold_167-1575043694:1229898..1230056TCONS_00050104-exon-scaffold_167-1575043694:1229898..1230056Clytia hemisphaericaexon
TCONS_00050104-exon-scaffold_167-1510915933:1236348..1236668TCONS_00050104-exon-scaffold_167-1510915933:1236348..1236668Clytia hemisphaericaexon
TCONS_00050104-exon-scaffold_167-1510915933:1235869..1236177TCONS_00050104-exon-scaffold_167-1510915933:1235869..1236177Clytia hemisphaericaexon
TCONS_00050104-exon-scaffold_167-1510915933:1234036..1234294TCONS_00050104-exon-scaffold_167-1510915933:1234036..1234294Clytia hemisphaericaexon
TCONS_00050104-exon-scaffold_167-1510915933:1229898..1230056TCONS_00050104-exon-scaffold_167-1510915933:1229898..1230056Clytia hemisphaericaexon
TCONS_00050104-exon-scaffold_167-1491911889:1236348..1236668TCONS_00050104-exon-scaffold_167-1491911889:1236348..1236668Clytia hemisphaericaexon
TCONS_00050104-exon-scaffold_167-1491911889:1235869..1236177TCONS_00050104-exon-scaffold_167-1491911889:1235869..1236177Clytia hemisphaericaexon
TCONS_00050104-exon-scaffold_167-1491911889:1234036..1234294TCONS_00050104-exon-scaffold_167-1491911889:1234036..1234294Clytia hemisphaericaexon
TCONS_00050104-exon-scaffold_167-1491911889:1229898..1230056TCONS_00050104-exon-scaffold_167-1491911889:1229898..1230056Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050104-proteinTCONS_00050104-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:1229898..1236668 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.23939 0.0936825 0.741321 0.405555 0.924205 1.1706 0.356334 0.220689 0.471252 0.450593 1.06867 0.876178 1.9209 2.44794 1.07929 0.911017 1.25862 1.92854 1.43095 0.83756 1.16362 1.76316 230.906 98.4605 0.405875 0.309401 0.891744 0.812909
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR003961FN3_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050104 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top