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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050074 ID=TCONS_00050074|Name=TCONS_00050074|organism=Clytia hemisphaerica|type=transcript|length=572bp
GCTTGTTCTCCTTCTGTCCCATGTTTTAATACCTAGTTtctgtatcggag
gatatcgagggcgaagGCTGTACGTTTAATGAAAGGTATATTCGCAGCCA
ACCGTGATAAACTTCAGAAAGAGAAGGTTAAACGGCACGAACAGCACgag
aaattcatgaaaaaagtcaaagaatCCGAAGGAAAACGTGATCAACGGAT
CAAAGAACAACGCCGCAAAGTGTTCCGTATTCTCGGACAAGAACAAAAGC
GGAAAGAGAAGGCTGCAATGAGAAGTAAGAGGTGATCAAACGAAAGTGTC
CCGGCGTTCTTGGAAAGGGATAACTGCGGAATAGAGTAACTCCGGGTAAC
GGAAAATGCGGAAAGAACCAGATCTAAGGTgaaatctttcttttattttt
taggaaattttttttatgataacCATGCAAATTATTTTGTATACTGACAT
TAAAGAAATCCACTGAAGACTAATGGCTCTTGTTAatgattttctcaaat
attcTGATTTGATATTTTATACTTCCCACGCCTTTTTTAGATCTATCTGT
ATGTCACCATCAAACTTCTAAA Run BLAST on NCBI transcript from alignment at scaffold_167:847199..848279- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050074 ID=TCONS_00050074|Name=TCONS_00050074|organism=Clytia hemisphaerica|type=transcript|length=1081bp|location=Sequence derived from alignment at scaffold_167:847199..848279- (Clytia hemisphaerica)
GCTTGTTCTCCTTCTGTCCCATGTTTTAATACCTAGTTTCTGTATCGGAG
GATATCGAGGGCGAAGGTAAGTGAAATTGATACAAAACAAAGTCGATAGT
TGATGTACGGCTCTATATCGCCTTTGCTCACCTAAACAGACGACGATATT
TTGGTGTTTTTACCGTCGTCGAGCAAAGTGGACGGTGATTTTGGAGGCAT
GTCAACTTTGCTTTATTCCGTCTTCCCTCGATTTATCTCGAATATATAAA
CTCGCTAATTTTGCGTTTACTCCTCTTGCCCGTAACTACAAATACTGTCC
CAAAATTTAAAGCCTACTATTAATTTATGTAACAATGTATCGATTATATG
GAGAGCATTCGTCAAAATATATTTAAAAATACAAGTAGAGCCGGCTATTG
GGTAGAAGTCGAGTTTGATTGAAAAGTTTCAAAATTCCGACTGACTGTTG
TTTCTAAATTACAGACTTTACTTTATTTAACATTACANTTGAAAAGTTTC
AAAACTCCGACTGACTGTCGTTTCTAAATTACAGACTTTACTTTATTTAA
CATTACACGTGTCCTTCTTTCATAGGCTGTACGTTTAATGAAAGGTATAT
TCGCAGCCAACCGTGATAAACTTCAGAAAGAGAAGGTTAAACGGCACGAA
CAGCACGAGAAATTCATGAAAAAAGTCAAAGAATCCGAAGGAAAACGTGA
TCAACGGATCAAAGAACAACGCCGCAAAGTGTTCCGTATTCTCGGACAAG
AACAAAAGCGGAAAGAGAAGGCTGCAATGAGAAGTAAGAGGTGATCAAAC
GAAAGTGTCCCGGCGTTCTTGGAAAGGGATAACTGCGGAATAGAGTAACT
CCGGGTAACGGAAAATGCGGAAAGAACCAGATCTAAGGTGAAATCTTTCT
TTTATTTTTTAGGAAATTTTTTTTATGATAACCATGCAAATTATTTTGTA
TACTGACATTAAAGAAATCCACTGAAGACTAATGGCTCTTGTTAATGATT
TTCTCAAATATTCTGATTTGATATTTTATACTTCCCACGCCTTTTTTAGA
TCTATCTGTATGTCACCATCAAACTTCTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050074-exon-scaffold_167-1575043694:848214..848279 | TCONS_00050074-exon-scaffold_167-1575043694:848214..848279 | Clytia hemisphaerica | exon |
| TCONS_00050074-exon-scaffold_167-1575043694:847199..847704 | TCONS_00050074-exon-scaffold_167-1575043694:847199..847704 | Clytia hemisphaerica | exon |
| TCONS_00050074-exon-scaffold_167-1510915933:848214..848279 | TCONS_00050074-exon-scaffold_167-1510915933:848214..848279 | Clytia hemisphaerica | exon |
| TCONS_00050074-exon-scaffold_167-1510915933:847199..847704 | TCONS_00050074-exon-scaffold_167-1510915933:847199..847704 | Clytia hemisphaerica | exon |
| TCONS_00050074-exon-scaffold_167-1491911889:848214..848279 | TCONS_00050074-exon-scaffold_167-1491911889:848214..848279 | Clytia hemisphaerica | exon |
| TCONS_00050074-exon-scaffold_167-1491911889:847199..847704 | TCONS_00050074-exon-scaffold_167-1491911889:847199..847704 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:847199..848279 - |
Blast
The following BLAST results are available for this feature:
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