TCONS_00050043 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00050043
Unique Name	TCONS_00050043
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2320

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_167:412554..427775-

transcript sequence

>TCONS_00050043 ID=TCONS_00050043|Name=TCONS_00050043|organism=Clytia hemisphaerica|type=transcript|length=2320bp
aaaccTTTACTGTTAAAATGACTTCTCTTTAAGATacacaaatattattt
tatgaCAATAAACATTTGGTGGAAGAAGGTTGCGAAACAAATTCAATTAA
TTCTTCACCAATATCTATTAACTTTGTTTCCAGGGTGATGCCTGGTTTTG
TAACAAGCTTTGGAGTAGatccaaaaagatttttctctttttctaagGCT
TGAGCAATGTTTCTGATTCTATTGGATTTGAAGTTGGTAATTCGAAATGA
ACGTTGGTGGATGGTTAAATCAGTAGCTTTAATCGAAACCAATACCTGCA
ACATTGCATATAATTTAATTGAAATggtttctgaaaatttcagattccAA
AGTTGGTCATTGTCATCAAATCCAACTATATTCTCACCAAATTTCCATAA
ACAGTTTTCCACACTTAGGATTGATATAATGGAAGACGGATGATTGGTAA
TTTTTGATATTTCCTTCTTAATATCTGATATCGTATCTGTTTCCTTCATA
TTTAAATCGATAGTTTCACTGAGAAGATGTCCAGCACATTTGATAACTAC
TTGTAATTCTTTTGCTGGTTTGACAATCAAGTTAAGAGTAATCGAATCAT
TTTCTTTGACAACCGttgaaagtgaaaatatttcCATGAAACCTTCTAAC
TGAAAATCATTAAATTTGTAACAAAACAGTGATTGCAAATGTGGTGCAAT
GTCTTTTATTTCATAGATTGTTCTTTTGAGATCTCCAACAGTTAACAGAG
TTTCTTGCTGAAACAAATCTATTGTAAATTGACCTGTCAGAAATTTAACG
TTAATTTCTTTCAAGTATACTAAATGATGCATTTCACAAACTTCTTTGAC
CCTTTTATTGGGTAGGACGAACAAGGTTACGTCGACgttttcgaaaattt
cattttctcttatGAATAAGCTTTCTATGATGGTATCTTTGTCTAACTTG
TTACCATCATGTGCAAGCCAAATTTTTGTATAGAAAAATTCTCGATGTTT
TTTAATAATCTCATTGCACACATCTTCAGGATTAACAAAAAATTCCCATT
GCGATAAAGGTATACTACAGAACGTTGAACCGGTATTAGGGCATTTAATA
ATAATTGAACCGACTCTAGATAAACCTAATGGTTCAAGGTGTTTCAATAA
GTCTGTTTCATCATCATCTACTTGAATTGCTAGTCTGATTTTTTTACAtc
taaaaatgtcaatttgTGAATATTTGACACGATTTTGatttacaaagaaa
agaaaccTACGTATATCTTTTCGAATTCCAAAGGTTTCATGAAGGAAATC
ATTAAGAGATGGTCCATTGTTCCCTCTataataaaaataccaaatattTT
CCTCGTTTCCACTAACAATTTTTATAGGTTCCATCATTCTTATATCGTTC
TGAGTATAAATTTCCTTTAAATCAGTTTTGTCAGTGTAATGAACGTATAG
ATGAAGCTCCATATTTTTTAGTTGATAAGATCGATCGAGCCAGACACGTG
ACAAGTTATTGGTAAAAATTGGTCCGTCACAATATCCAATAGTCTGTTCT
TCAATAGGAATCTGATACAAGTCTCTGATCCATACTTTTATGTCCTCAAG
ATAAAAAGAACCTATATATAATATTGGATATCCAATTTGCCTTTTAGCTT
CTATTCCGTgcattgaaattttgatttcacgGAATTTGATATCGATTGTA
GTATTTTCATCATCATTCTCAAACATATCGAATATACAATCATCCACTGT
AATAACTACGATATTGAAAGAGAATTGAGTATACTTTAAGAATCCATCCA
GGAATAAATCGACCAACAATTGATTGTCTGTGAGAATCATAAACCcatca
ataaaattgattctgTCAGTCGattcttttatccttttttcAGCATAAAC
TCTTTTCTTCAGATCTAGTACCGTTGTATTGATATCCAAATCTTTATAAA
TAATTTGACAGGATTGATACAAGTGTctagacaaatcaataatttttata
ttccttattcctgaattttttttcaagGCAAGATTTCTACGGGTATGCAC
TAAGGTATAATCAATCAAGTTACCAGTACTATCATCAATAATAACATCAA
GTTTAATATCAAACTGCAATCGTTTTTGATAAAGTTCTTCAAAAGTTTCT
GTGTTCAAAATAATTCCTTGATGTTCAATGCCTTGACATGAAGCTGGAAT
CTCATAACGtttttcaatacttttcttcaaattgtCATATGAATCTGCAT
CACACCAGTAAAATATGGAGGGAGGATTGTTGCCAATATTCACAGTcaaa
tgatttttcatttttatttt

Run BLAST on NCBI

transcript from alignment at scaffold_167:412554..427775-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00050043 ID=TCONS_00050043|Name=TCONS_00050043|organism=Clytia hemisphaerica|type=transcript|length=15222bp|location=Sequence derived from alignment at scaffold_167:412554..427775- (Clytia hemisphaerica)
AAACCTTTACTGTTAAAATGACTTCTCTTTAAGATACACAAATATTATTT
TATGACAATAAACATTTGGTGGAAGAAGGTTGCGAAACAAATTCAATTAA
TTCTTCACCAATATCTATTAACTTTGTTTCCAGGGTGATGCCTGGTTTTG
TAACAAGCTTTGGAGTAGATCCAAAAAGATTTTTCTCTTTTTCTAAGGCT
TGAGCAATGTTTCTGATTCTATTGGATTTGAAGTTGGTAATTCGAAATGA
ACGTTGGTGGATGGTTAAATCAGTAGCTTTAATCGAAACCAATACCTGCA
ACATTGCATATAATTTAATTGAAATGGTTTCTGAAAATTTCAGATTCCAA
AGTTGGTCATTGTCATCAAATCCAACTATATTCTCACCAAATTTCCATAA
ACAGTTTTCCACACTTAGGATTGATATAATGGAAGACGGATGATTGGTAA
TTTTTGATATTTCCTTCTTAATATCTGATATCGTATCTGTTTCCTTCATA
TTTAAATCGATAGTTTCACTGAGAAGATGTCCAGCACATTTGATAACTAC
TTGTAATTCTTTTGCTGGTTTGACAATCAAGTTAAGAGTAATCGAATCAT
TTTCTTTGACAACCGTTGAAAGTGAAAATATTTCCATGAAACCTTCTAAC
TGAAAATCATTAAATTTGTAACAAAACAGTGATTGCAAATGTGGTGCAAT
GTCTTTTATTTCATAGATTGTTCTTTTGAGATCTCCAACAGTTAACAGAG
TTTCTTGCTGAAACAAATCTATTGTAAATTGACCTGTCAGAAATTTAACG
TTAATTTCTTTCAAGTATACTAAATGATGCATTTCACAAACTTCTTTGAC
CCTTTTATTGGGTAGGACGAACAAGGTTACGTCGACGTTTTCGAAAATTT
CATTTTCTCTTATGAATAAGCTTTCTATGATGGTATCTTTGTCTAACTTG
TTACCATCATGTGCAAGCCAAATTTTTGTATAGAAAAATTCTCGATGTTT
TTTAATAATCTCATTGCACACATCTTCAGGATTAACAAAAAATTCCCATT
GCGATAAAGGTATACTACAGAACGTTGAACCGGTATTAGGGCATTTAATA
ATAATTGAACCGACTCTAGATAAACCTAATGGTTCAAGGTGTTTCAATAA
GTCTGTTTCATCATCATCTACTTGAATTGCTAGTCTGATTTTTTTACATC
TAAAAATGTCAATTTGTGAATATTTGACACGATTTTGATTTACAAAGAAA
AGAAACCTACGTATATCTTTTCGAATTCCAAAGGTTTCATGAAGGAAATC
ATTAAGAGATGGTCCATTGTTCCCTCTATAATAAAAATACCAAATATTTT
CCTCGTTTCCACTAACAATTTTTATAGGTTCCATCATTCTTATATCGTTC
TGAGTATAAATTTCCTTTAAATCAGTTTTGTCAGTGTAATGAACGTATAG
ATGAAGCTCCATATTTTTTAGTTGATAAGATCGATCGAGCCAGACACGTG
ACAAGTTATTGGTAAAAATTGGTCCGTCACAATATCCAATAGTCTGTTCT
TCAATAGGAATCTGATACAAGTCTCTGATCCATACTTTTATGTCCTCAAG
ATAAAAAGAACCTATATATAATATTGGATATCCAATTTGCCTTTTAGCTT
CTATTCCGTGCATTGAAATTTTGATTTCACGGAATTTGATATCGATTGTA
GTATTTTCATCATCATTCTCAAACATATCGAATATACAATCATCCACTGT
AATAACTACGATATTGAAAGAGAATTGAGTATACTTTAAGAATCCATCCA
GGAATAAATCGACCAACAATTGATTGTCTGTGAGAATCATAAACCCATCA
ATAAAATTGATTCTGTCAGTCGATTCTTTTATCCTTTTTTCAGCATAAAC
TCTTTTCTTCAGATCTAGTACCGTTGTATTGATATCCAAATCTTTATAAA
TAATTTGACAGGATTGATACAAGTGTCTAGACAAATCAATAATTTTTATA
TTCCTTATTCCTGAATTTTTTTTCAAGGCAAGATTTCTTCGGGTATGTAC
TAAGGTAGAATCAATCAAGTTACCAGTACTATCATCAATAATAACATCAA
GTTTAATATCAAACTGCAATCGTTTTTGATAAAGTTCTTCAAAAGTTTCT
GTATCCAAAATAATTCCTTGATGTTCAATGCCTTGACATGAAGCTGGAAT
CTCATAACGTTTTTCAATGCTTTTCTTCAAATTGTCATATGAATCTGCAT
CACACCAATAAAATATGGAGGGAGGGTTATTGCCAATATTCACAGTCAAA
TGATTTTTCATTTTTATTTTTACTCTGAAAGAAAAAAAAGGACAAAAATT
GATTTTTTTATTGTTTATCATTTTCAAGCGTCGTGATTGCTTACATCTTT
AGGAAAAAGATAGCTGATACCTGACAAACACTCTTCTTCTTTTACAAGAA
CAACACAATAAGAACTATAAGGCTCCAAGAATGTCAAATAATAAGAACAA
TATAAGAACAATCATCAGCCTGAATTAGTTGAATTTTGAGCAAATTAATT
GCTTAAATCTCAAGATAGGAATAAAAGTAAACAAGTACAATGTATATTGG
ACCTACCTGATGATAAATAATATAGAATGGTAATAAAAAAAGTAAGTAAA
ATAAGAAACACCATATTTCAAGCATTTCGACCGGAAAATATTTTTCTCAA
AAATCCAAATCAACCATGTTTTGGACATTGCTAATACGCATCTTTGTGCA
AAAATCATAAAAACTGATTATGAAATCTCTAAAAAATGCCAAAAACTGGT
TTTCCAGCATATTTCCGGCAATTTAGGCCGGAAAAGTATGTTTGTTGAGA
ATCATGCTCAGTCACATTTTAGATATTGCCAATTTGCATCAGTGTTCAAA
ACTTTATGAAAAATATTAAGTACAGCTCGAGAAATTCAAGAAAACTTGTT
TTTCAGGCGATAATGGATTGTTCCGCATGGCTGGAACCCCCCCCCCCCTG
GCCTGAGGGGGGGGGCTAAAAGGTCAAGCAGCAATTGGTACCTGGTTTTA
GCCTGTGGCTAGGGGGGACTAACCATGTTAGGGGTCACCTAAATTTTTCC
AGATGGACCTGGGGGCTAGATTCTATGTTTGGTGATTGAATTATAAGCAG
CCTACCAGACCATAGGGTTGGCACTTTCTCTTCTTATATTTTAATCTAAG
CAATGCTCAAAAACTGACAATTTGGTATCTAATGTATTATCTTCAGTGCA
CTGATCTGTAAAAGTTCTTTAATCCTGTGTCATTTACTTATTTCTTAGGG
CATTTATTTTATTCAGCAATAAGCTAAACTAACTGTTGTATTTATTTGAT
TGTTTAAAAAGGATTTTCGAAAAAATTTGACNCTGGCTTCAAAAATCAGG
TTTTTTTGACAATTGAAACATACTTGATGATAGGTAGTGTTATTAATAAT
GTTATTGTGTGGAAAAATTGTTATTACTCATTGTAAACATTTCTTCTTGA
ATGTTTACTGGAATTAAAAAGTTAAGATAATGAGTTTTGAGGAGGTTACT
TTATAAAATAAATTTGTTCGTTTTTATGGTGACACACTGGATCATTAAAA
TTANACCAAACCATGGTTGGCCCTCGCTGTGTCACGAAACTTCAGCCCAA
CACTAATATGAAAATGCTTCCTACGGCACTGATCTGTAAAAGTTCTTTAA
TCCTGTGTCATTTNGCCAAACCATGGTTGGCCCTCGCTGTGTCACAAAAC
TTCAGCCCAACACTAATATGAAAATGCTTCCTACGGCACTGATCTGTAAA
AGTTCTTTAATCCTGTGTCATTTACTTATTTCTTAGGGCATTTATTTTAT
TCAGCAATAAGCTAAACTAACTGTTGTATTTATTTGATTGTTTAAAAAGG
ATTTTCGAAAAAATTTGACNAGGAGCCAAAGCCGTAGAAAGAGAAAAGTT
AAGATACAAATGGTTTAATAGCATTAACATTACCAGTGTTTTAAAAATCT
AGAAACTCGCAAATGTATTGAAAGAGCTTTTGGAATTTTATTCTCAGAAA
TGTGNATGTCATTGGATTAGGGGTCACCTAAAATATTTGGCAACCAGGGG
TTACCTAAATCTTAGGGGTCACCTAAAACCTGCTGCAAAGCCATGGTTCC
GGCAATTTTAAGAAAGTTCTGGCTTCAAAAATCAGGTTTTTTTGACAATT
GAAACATACTTGATGATAGGTAGTGTTATTAATAATGTTCTTGTGTGAAA
AATTGTTATTACTCATTTTAAATATTTCTTCTTGAATGTTTACTGCAATT
AAAAAGTTAAGATAATGAGTTTTGAGGAGGTTACTTTATAAAATAAATTT
GTTCGTTTTTATGGTGACACACTGGATCATTAAAATTAATAATTTGCAGA
TGTTGATTCAAAATGATATTTATACTAATATTGATTAAGATTCTGATAGG
AGCCAAAGCCGTAGAAAGAGAAAAGTTAAGATTCAAATGGTTTAATAGCA
TTAACATTACCAGTGATTTAAAAATTTAGAAACTCGCAAATGTATTGAAA
GAGCTTTTGGAATATAAATATTATTTTCATGACAATAAACATTTGGTGGA
AGAAGATTGCGAAACAAATTCAATTAATTCTTCACCAATATCTATTAACT
TCGTTTCCAGGGTGATGCCTGGTTTTTCAACAAGCTTTGGAGTAGATCCG
AAAAGCTTTTTCTCTTTTTCTAAGACTTGGGTAATGTTTCTGATTTTATT
GGATTTGAAGTTGGTAATTCGAAATGAACGTTGGTGGATGGCTGAATTAG
TAGCTTTAATTGAAACCAATACCTGCAAGAATGCAAAAAATTCAATTGAA
TTGTTTTCTGAAAGCTTCAGATTCCAAAGTTGGTCATTGTCATCAAATCC
AACTATATTCTCACCAAATTTCCATAAACAGTTTTCCACACTTAGGATTG
ATATAATGGAAGATGGATGATTGGTAATTTTTGATACTTCCTTCTTAATA
TCTGATATCGTATCGGTTTCCTTCATATTTAAATCGATAGTTTCACTGTG
AAGATGTCCAGCAAGTTTGATAGCTACTTGTAATTCTTTTGCTGGTTTGA
CAATCAAGTTAAGAGTAATCGAATCATTTTCTTTGACAACTGTTGAAAGT
GAAAATATTTCCATAAAACCTTCTAACTCAAAATCACTAAATTTGTAACA
AAACAGTGATTGCAAATGTTGTGCAATGTCTTTTATTTCATAGATTGTTC
TTTTGAGATCTCCAACAGTTAACAGATTTTCTTGCTGAAACAAATCTATT
GTAAATTGACCTGTCAGAAATTTAACGTTAATTTCTTTCAAGTATACTAA
ATGATGCATTTCACAAACTTCTTTGACCCTTTTATTGGGTAGGACGAACA
AGGTTAAGTCGACGTTTTCGAAAATTTCATTTTCTCTAATGAATAAGCTT
TCTATGATGGTATCTTTGTCTAACTTGTTACCATCATGAGCAAGCCAAAT
TTTTGTAAAGAAAAGTTTTTGATGGTTTTTAATAATCTCATTGCACACAT
CTTCAAGATCGACAAAAAATTTCCATTGCGATAAGGGTATACTACAGAAA
ACTGAACCGGTATTAGGGCATTTGATAATAATCGAACCGACTCTAGATAA
ACCTAATGGTTCAAGGTGTTTCAATAAGTCTGTTTCATCATCATCTACTT
GAATTGCTAAATTGATTTCTTTACATCTAAAAAGGTCAATTTGTGAATGT
TTGACAGGATTTGNTAAATTGATAGTTTCACTGTGAAGATGTCCAGCAAG
TTTGATAGCTACTTGTAATTCTTTTGCTGGTTTGACAATCAAGTTTAGAG
TAATCGAATCATTTTCTTTGACAACTGTTAAAAGTGAAAATATTTCCATA
AAACCTTCTAACTCAAAATCACTAAATTTGTAACAAAACAGTGATTGCAA
ATGTGGTGCAATGTCTTTTATTTCATAGATTGTTCTTTTGAGATCTCCAA
CAGTTAACAGATTTTCTTGCTGAAACAAATCTATTGTAAATTGACCTGTC
AGAAATTTAACGTTAATTTCTTTCAAGTATACTAAATGATGCATTTCACA
AACTTCTTTGACCCTTTTATTGGGTAGGACGAACAAGGTTACGTCGACGT
TTTCGAAAATTTCATTTTCTCTTATGAATAAGCTTTCTATGATGGTATCT
TTGTCTAACTTGTTACCATCATGTGCAAGCCAAATTTTTGTATAGAAAAG
TTTTTGATGTTTTTTAATAATCTCATTGCACACATCTTCAAGATCGACAA
AAAATTTCCATTGCGATAAGGGTATACTACAGAAAACTGAACCGGTATTA
GGGCATTTGATAATAATCGAACCGACTCTAGATAAACCTAATGGTTCAAG
GTGTTTCAATAAGTCTGTTTCATCATCATCTACTTGAATTGCTAAATTGA
TTTCTTTACATCTAAAAAGGTCAATTTGTGAATGTTTGACAGGATTTGGA
TTTACAAAGAAAAGAAACCTTCGTAGATCTTTTCGAATTCTAAAGGTTTC
ATGAAGAAAATCATTAAGAGATGGTCCATTGTTCCCTCTATAATAATAAT
ACCAAATATTTTTCTTGTTTCCACTAACAATTTTTGAAGGTTCCATCATT
TTTGTATCGTTCTGACCATAAATTTCCTTTAACTCAGTTTTGTCAGTGTA
ATGAACGTATAGCTGAAGCTCCACATTTTCTAGTTGATAAGATCGATCGA
GCCAGACACGTGACAAGTCTTCGTTATCGGTAAAAATTGGTCCGTCACAA
TATCCAAAAGTCTGTTCTTCAATAGGAATCTGATACATGTCTTTGATCCA
TACTTTCATGTCCTCAGGATAAAAAGAACCTATATCGAATATTGGATATC
CGATTTGCCTTATAGCTTCTATTCCTTGCATTGAAATTTTGATTTCACGG
AATTTGATATTGATTGTAGTATTTTCATCATCATTCTCAAACATATCGAA
TATACAATCATCCACTGTGATAACTACGATATTGAAAGAGAATTGAGTAT
ACTTTAAGAATCCATCCAGGAATAAATCGACCAACAATTGATTGTCTGTG
AGAATCATAAGTTTACCATAAATAAAATTTATTCTGTTAGTCGATTCTTT
TATCCTTTTTTCAGCATAAACTCTTTTTTTCAGATCTAGTACCGTTGTAT
TGATATCCAAATCTTTATAAATAATTTGACAGGATTGATACAAGTGTCTA
GATAAATCAATAATTTTTATATTCCTTATTCCTGAACTTTTTTCCAAGGC
AAGATTTCTACGGGTATGCACTAAGGTATAATCAATCAAGTTACCAGTAC
TATCATCAATAATAACATCAAGTTTAATATCAAACTGCAATCGTTTTTGA
TAAAGTTCTTCAAAAGTTTCTGTGTTCAAAATAATTCCTTGATGTTCAAT
GCCTTGACATGAAGCTGGAATCTCATAACGTTTTTCAATACTTTTCTTCA
AATTGTCATATGAATCTGCATCACACCAGTAAAATATGGAGGGAGGATTG
TTGCCAATATTCACAGTCAAATGATTTTTCATTTTTATTTTTATTTTCTG
AAAAAAAGGAGAACAATTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT
CGACGTTTTCGAAAATTTCATTTTCTCTAATGAATAAGCTTTCTATGATG
GTATCTTTGTCTAACTTGTTACCATCATGTGCAAGCCAAATTTTTGTATA
GAAAAGTTTTTGATGTTTTTTAATAATCTCATTGCACACATCTTCAAGAT
CGACAAAAAATTTCCATTGCGATAAGGGTATACTACAGAAAACTGAACCG
GTATTAGGGCATTTGATAATAATTGAACCGACTCTAGATCAACCTAATGG
TTCAAGGTGTTTCAATAAGTCTGTTTCATCATCATCTACTTGAATTGCTA
GTTTGATTTCTTTACATCTAAAAAGGTCAATTTGTGAATGTTTGACAGGA
TTTTGATTTACAAAAAAAAGAAACCTTCGTAGATCTTTTCGAATTCTAAA
GGTTTCATGAAGAAAATCATTAAGAGATGGTCCATTGTTCCCTCTATAAT
AATAATACCAAATATTTTTCTTGTTTCCACTAACAATTTTTGAAGGTTCC
ATCATTTTTGTATCGTTCTGACCATAAATTTCCTTTAACTCAGTTTTGTC
AGTGTAATGAACGTATAGCTGAAGCTCCACATTTTCTAGTTGATAAGATC
GATCGAGCCAGACACGTGACAAGTCTTCGCTATCGGTGAAAATTGGTCCG
TCACAATATCCAAAAGTCTGTTCTTCAATAGGAATCTGATACAAGTCTTT
GATCCAAAGTTTCATGTCCTCGGGATAAAAAGAACCTATATCGAATATTG
GATATCCGATTTGCCTTATAGCTTCTATTCCTTGCATTGAAATTTTGATT
TCACTGAATTTGATATATGCATTTTCATTATCATTTTCAAACATATCGAA
TATACAATCATCCACTATGATCACTATGACATGGAAAGAAAATTGAGTAT
ACTCTAAGGACCCATCCAGGAATAAATCGACTAACAACTGATTGTCTGTG
AGAATCATATGTTTTTTACCATAAATAAAATTGATTCTCTTTGTTGACAC
TCTTTTTTTAGCAGAAATTATTTTTTTCAAATCTAACACTGTTGTACTGA
TATCCAAATCTTTATAATTGATTTGAAAGGCTGATGAGTTACTAGATAAA
TAAATCATTTTAATATTCCTTATTCCTGATCCTTTTTTTAAAGCGAGGTT
TCTGCGGTCATGTACTAAGACGGGATCGATCAAGCTATCAGTAATATTAA
CATCAAGTTCAATATCAAACTGCAATCGTTTTTGATACAGTTCTTCAAAA
GTTTCTGTATCTAAAATAATTCCTTGATGTTCAATGTCTTGACATGAAAC
TGGAATCTTAAAACGTTTTTCAATACTTTTCTTCAAATTGTCATATGAAT
CTGCATCACATCAGTAAAATATAGAGGAAGGGTTGTTGCCAATATTCACA
GTCAAATGATTTTTCATATTTTATTTTTACTCTGAAAGAAAAAAAAAGTA
GAAAAATTGATTTATCTATTGTTTATCATTTTCGAGCATCACGATTGTTT
AAACCTTTAGGAATAGGTTAGCTGATACCTAACAAACACTGCCTTATTAC
ATGAAAATAAATATGGAAGTATTTAACACGAATTGAAAATTAATAAAAAC
CCCCTTAATTAAAACCAGCCGTGGTGTGCTTGAATAAGCAAATCAAATTC
GTGTTAATTTTTTGTGTGTTAATTTCAAGGCCGTTAAATACTTCAGTATT
TATTTTCATGTAATAAGGTATTTTTTTTAATAAGTATTAGTTATCGCATA
GTAGAGAGTGCAATATGGGATGGGAAAATAAACCCCTATTGCACGAGGTA
TTATGTCTTAATTGGTTTATCGCAAGACTTGAAAAATCTACTTCCTTTTT
TTATTTCTCAAATAAATTGACGTCAAAAAAATGAAGCTGTTGCATTGATC
AGTGCAATAAATGAAGCGCGACAGTGCAAATAAAACAAACAGTGCAATAA
GTGAAAATATGACGTTGATGCACTGTAATGTAACCAATCAGATTGCACAT
ATTTTACATGGCATGCGATAAGAACTATGAGGCTCAAAAATGCCAAATAA
GAAGAACAATATAAAAACAATCATCAGCTTGAAATAGCTGAATTTTGAGC
AAATTAATTGCTTAAATCTCAAGATAGGAATAAAAGTAAACAAGCACAAT
GCATATTGGAGCTACCTAATGATAAATAATATAGAATGGAAATAAAAAAG
TAAGTAAAATAAGAAGCAGCATATTTCTTGCATGCATTTTCAGTATGTTT
ATTTAAAATAAGGCTCTGTCACATTTTAGGTATTGCCATTTATTATTAGT
GTCCTAAAGTTCATGAAAAATATCAAGTATAGAGCTCGAGAAATTCAAGA
AAATCTGTTTTGCCGGCGATAATGGTCTGTTCCGGCGATTTTAGGAAAGT
TCTGGCTTCAAAAATCAGGTTTTTCTTTACGATTGAAACATACTTAATGA
TGGGTAGTGTTATTAATAATGTTATTGTGTGAAAAAAAGTTATTACTCAT
TGTAAACATTTCTTCTTGAATGTTTACTGCAATTAAAAAGTTAAGATAAT
GAGTTTTGAGGAGGTTACTTTATAAAATAAATTTGTTCGCTCTTTTGGAG
ACACACTGAATCATTAAAAATATTATTTTGCAGATGTTGATTCAAAATGA
TATTATACTAATATTGATTAAGATTTTGATAGGAGCCAAGCAGTGTAAAG
TGACAAGGTTAAGATTCTAATGGTTTAATAGACATTAACATTACCAGTGT
TTTAAAAATCTAGGAACTCGCAAATTTATTGAAAGAGCTTTTGGATTTTT
AATCTAAAAAGTTTCGTATTTTTTCAAGGAAAATTAAGAGAAAGCTATCG
CAGATCAACGAAGAAACTTATCAAAAACAGACAACAATTTCATGCAAAAA
ACCTTTACTGTTAAAATGACTTCTCTTTAAGATACACAAATATTATTTTC
ATGACAATAAACATTTGGTGGAGGAAGGCTGCGAAACAAATTCAATTAAT
TCTTCACCAATATCTATTAACTTTGTTTCCAGGGTGATGCCTGGTTTCGT
AACAATCTTTGGAGTAGACCCGAAAAGCTTTTTCTCTTTTTCTAAGACTT
GTGCAATGTTTCTGATTCTATTGGATTTGAAGTTGGTAATTCGAAATGAA
CGTTGGTGGATGGTTAAATCAGCTTTAATCGAAACCAATACCTGCAACAT
TGCATATAATTTAATTGAAATGGTTTCTGAAAGTTTCAGATGCCAAAGTT
GGTCATTGTCATCAAATCCAACTATATTCTCACCAAATTTCCATAAACAG
TTTTCCACACTTAGGATTGATATAATGGAAGACGGATGATTGGTAATTTT
TGATACTTCCTTCTTAATATCTGAAATTGTATCTGTTTCCTTCATATTTA
AATCGATAGTTTCACTGTGAAGATGTCCAGCACATTTGATAACTACTTGT
AATTCTTTTGCTGGTTTGACAATCAAGTTAAGAGTAATCGAATCATTTTC
TTTGACATCTGTTAAAAGTGAAAATATTTCCATAAAACCTTCCAACTGAA
AATCACTAAATTTGTAACAAAACAGTGATTGCAAATGTGGTGCAATGTCT
TTTATTTCATAGATTGTTCTTTTGAGTTCTCCAACAGTTAACAGATTTTC
TTGCTGAAACAAATCTATTGTAAATTGACCTGTCAGAAATTTAACGTTAA
TTTCTTTCAAGTATACTAAATGATGCATTTCACAAACTTCTTTGACCCTT
TTATTGGGTAGGACGAACAAGGTTAACTCGATGTTTTCCAAAATTTCATT
TTCTCTGATAAATAAGCTTTCTATGATAGTATCTTTGCCTAACTTGTTAC
CATCATGTGCAAGCCAAATTTTTGTATAGAAAAGTTCTCGATGTTTTTTA
ATAATCTCATTGCACACATCTTCAGGATCGACAAAAGATTCCCATTGCGA
TAAGGGTAAACTACAGAAAACTGAACCGGTATTAGGGCATTTAATAATAA
TTGAACCGACTCTAGATAAACCTAATGGTTTAAGGTGTTTCAATAAGTCT
GTTTCATCATCATCTACTTGAATTGCTAGTCTGATTTCTTTAAATCTAAA
AATGTCAATTTGTGAATATTTGACAGGATTTTGATTTACAAAGAAAATAA
ACCTTTGTAGATCTTTTCGAATTCCAAAGGTTTCATGAAGAAAATCATTA
AGAGATGGTCCATTGTTCCCTCTATAATAATACCAAATATTTTCCTTGTT
TCCACTAACAATTTTTAAAGGGTCCATCATTTTTATATCGTTCTGAGCAT
AAATTTCCTTTAACTCAGTTTTGTCAGTGTAATGAACGTATAGTTGAAGC
TCCACATTTTCTAGTTGATAAGATCGATCGAGCCAGACACGTGACAAGTC
TTCGTTATCGGTAAAAATTGGTCCGTCACGATATCCAATAGTCTGTTCTT
CAACAGGAATCTGATACATGTCTTTGATCCATACTTTCATGTCCTCAGGA
TAAAAAGAACCTATATCGAATATTGGATATCCGATTTGCCTTATAGCTTC
TATTCCTTGCATTGAAATTTTGATTTCACGGAATTTGATATTGATTGTAG
TATTTTCATCATCATTCTCAAACATATCGAATATACAATCATCCACTGTG
ATAACTACGATATTGAAAGAGAATTGAGTATACTTTAAGAATCCATCCAG
GAATAAATCGACCAACAATTGATTGTCTGTGAGAATCATAAGTTTACCAT
AAATAAAATTTATTCTGTTAGTCGATTCTTTTATCCTTTTTTCAGCATAA
ACTCTTTTTTTCAGATCTAGTACCGTTGTATTGATATCCAAATCTTTATA
AATAATTTGACAGGATTGATACAAGTGTCTAGATAAATCAATAATTTTTA
TATTCCTTATTCCTGAACTTTTTTCCAAGGCAAGATTTCTACGGGTATGC
ACTAAGGTATAATCAATCAAGTTACCAGTACTATCATCAATAATAACATC
AAGTTTAATATCAAACTGCAATCGTTTTTGATAAAGTTCTTCAAAAGTTT
CTGTGTTCAAAATAATTCCTTGATGTTCAATGCCTTGACATGAAGCTGGA
ATCTCATAACGTTTTTCAATACTTTTCTTCAAATTGTCATATGAATCTGC
ATCACACCAGTAAAATATGGAGGGAGGATTGTTGCCAATATTCACAGTCA
AATGATTTTTCATTTTTATTTT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_031697	XLOC_031697	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00050043-exon-scaffold_167-1575043694:425749..427775	TCONS_00050043-exon-scaffold_167-1575043694:425749..427775	Clytia hemisphaerica	exon
TCONS_00050043-exon-scaffold_167-1575043694:412554..412846	TCONS_00050043-exon-scaffold_167-1575043694:412554..412846	Clytia hemisphaerica	exon
TCONS_00050043-exon-scaffold_167-1510915933:425749..427775	TCONS_00050043-exon-scaffold_167-1510915933:425749..427775	Clytia hemisphaerica	exon
TCONS_00050043-exon-scaffold_167-1510915933:412554..412846	TCONS_00050043-exon-scaffold_167-1510915933:412554..412846	Clytia hemisphaerica	exon
TCONS_00050043-exon-scaffold_167-1491911889:425749..427775	TCONS_00050043-exon-scaffold_167-1491911889:425749..427775	Clytia hemisphaerica	exon
TCONS_00050043-exon-scaffold_167-1491911889:412554..412846	TCONS_00050043-exon-scaffold_167-1491911889:412554..412846	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_167	supercontig	scaffold_167:412554..427775 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.18827	0.279354	0	0.83378	0.682544	0.112152	0.5339	0	0.411385	0	1.03739	0.219137	0.198403	0	0.0729987	0	0	0	0.103397	0	0.915104	5.05099e-09	1.3372	0.990685	0	0	1.64426e-07	0.00464005	0.468948	1.02873

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00050043 vs. Swiss-Prot (Human)

BLAST of TCONS_00050043 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00050043 (transcript) - C. hemisphaerica