|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050039 ID=TCONS_00050039|Name=TCONS_00050039|organism=Clytia hemisphaerica|type=transcript|length=922bp
TCGTTCTGACCATAAATTTCCTTTAACTCAGTTTTGTCAGTGTAATGAAC
GTATAGCTGAAGCTCCACATTTTCTAGTCGATAAGATCGATCGAGCCAGA
CACGTGACAAGTCTTCGTTATCGGTAAAAATTGGTCCATCACAATATCCA
ATAGTCTGTTCTTCAATAGGAATCTGATACAAGTCTTTGATCCAAAGTTT
CATGTCCTCGGGATAAAAAGAACCCATATCGAATATTGGATATCCGATTT
GCCTTATAGCTTCTATTCCTTgcattgaaattttgatttcactgAATTTG
ATATATgcattttcatcatcattttcaaacaTATCGAATATACAATCATC
CACTGTGATAACTACGACATGGAAAGAAAATTGAGTATACTCTAAGGACC
CATCCATGAATAAATCGACCAACAACTGATTGTCTGTGAGAATCATAAGT
TTTTTACcataaataaaattgattctCTTTGTTGACACTCTTTTTTTagc
agaaattatttttttcaaatctaacACTGTTGTACTGATATCCAAATCTT
TATAATTGATTTGAAAGGCTGAAGACTTACTAGATAAATAAATCATTTTA
ATATTCCTTATTCCTGATCCTTTTTTTAAAGCGAGGTTTCTGCGGTCACG
TACTAAGACGGGATCGATCAAGCTATCAGTAATATTAACATCAAGTTCAA
AATCAAACTGCAATCGTTTTTGATAAAGTTCTTCAAAAGTTTCTGTATTC
AAAATAATTCCTTGATATTCAATGTCTTGACATGAAGTTGGAATCTCAAA
ACGTTTTTCAATGCATTTCTTCAAATTGTCATACGAATCTGCATCACACC
AGTAAAATATGGAGGGGGGATTGTTGCCAATATTCACAGTcaaatgattt
ttcatttttatttttattttct Run BLAST on NCBI transcript from alignment at scaffold_167:403294..404215- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050039 ID=TCONS_00050039|Name=TCONS_00050039|organism=Clytia hemisphaerica|type=transcript|length=922bp|location=Sequence derived from alignment at scaffold_167:403294..404215- (Clytia hemisphaerica)
TCGTTCTGACCATAAATTTCCTTTAACTCAGTTTTGTCAGTGTAATGAAC
GTATAGCTGAAGCTCCACATTTTCTAGTCGATAAGATCGATCGAGCCAGA
CACGTGACAAGTCTTCGTTATCGGTAAAAATTGGTCCATCACAATATCCA
ATAGTCTGTTCTTCAATAGGAATCTGATACAAGTCTTTGATCCAAAGTTT
CATGTCCTCGGGATAAAAAGAACCCATATCGAATATTGGATATCCGATTT
GCCTTATAGCTTCTATTCCTTGCATTGAAATTTTGATTTCACTGAATTTG
ATATATGCATTTTCATCATCATTTTCAAACATATCGAATATACAATCATC
CACTGTGATAACTACGACATGGAAAGAAAATTGAGTATACTCTAAGGACC
CATCCATGAATAAATCGACCAACAACTGATTGTCTGTGAGAATCATAAGT
TTTTTACCATAAATAAAATTGATTCTCTTTGTTGACACTCTTTTTTTAGC
AGAAATTATTTTTTTCAAATCTAACACTGTTGTACTGATATCCAAATCTT
TATAATTGATTTGAAAGGCTGAAGACTTACTAGATAAATAAATCATTTTA
ATATTCCTTATTCCTGATCCTTTTTTTAAAGCGAGGTTTCTGCGGTCACG
TACTAAGACGGGATCGATCAAGCTATCAGTAATATTAACATCAAGTTCAA
AATCAAACTGCAATCGTTTTTGATAAAGTTCTTCAAAAGTTTCTGTATTC
AAAATAATTCCTTGATATTCAATGTCTTGACATGAAGTTGGAATCTCAAA
ACGTTTTTCAATGCATTTCTTCAAATTGTCATACGAATCTGCATCACACC
AGTAAAATATGGAGGGGGGATTGTTGCCAATATTCACAGTCAAATGATTT
TTCATTTTTATTTTTATTTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050039-exon-scaffold_167-1575043694:403294..404215 | TCONS_00050039-exon-scaffold_167-1575043694:403294..404215 | Clytia hemisphaerica | exon |
| TCONS_00050039-exon-scaffold_167-1510915933:403294..404215 | TCONS_00050039-exon-scaffold_167-1510915933:403294..404215 | Clytia hemisphaerica | exon |
| TCONS_00050039-exon-scaffold_167-1491911889:403294..404215 | TCONS_00050039-exon-scaffold_167-1491911889:403294..404215 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:403294..404215 - |
Blast
The following BLAST results are available for this feature:
|
