TCONS_00050021 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050021
Unique NameTCONS_00050021
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length465

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050021 ID=TCONS_00050021|Name=TCONS_00050021|organism=Clytia hemisphaerica|type=transcript|length=465bp
ctttttatgattctcgaatatttctgtaattcgaacaaatgaaatttttc
gtacaacttcgaattagcgagagttaacAAACGTTGATAAGGACTTCCGC
ACCACGCTTAGTCAGGGAAGACTCGATAACATGGTGACCAAAGATTTGTT
CGAAAAATTTGTGATTGCTTTTGAAAAGTATCATGGATATGCTTATGATG
ACGACGTCAGTTATCTTTTGGATGTCGATGCAAGCCCTTATTCTGCAGCT
GAACAATTATCAAATGAAATGGAAGATTTTCTCAAGAAGGTGACGAACTT
GCAACAAAGAatcaatttgatgaaaaatctgATCATCGATTTGCAACGGA
AacaatcagaaaaatttacttcTATCGGACAAGATGATTTACTGGCAGAG
GAGTACGACAAATTACTGGCAACCATCAAACAAACATCCACATATTTGAA
TGATGATATCAAAGG
Run BLAST on NCBI

protein sequence of TCONS_00050021-protein

>TCONS_00050021-protein ID=TCONS_00050021-protein|Name=TCONS_00050021-protein|organism=Clytia hemisphaerica|type=polypeptide|length=111bp
MVTKDLFEKFVIAFEKYHGYAYDDDVSYLLDVDASPYSAAEQLSNEMEDF
LKKVTNLQQRINLMKNLIIDLQRKQSEKFTSIGQDDLLAEEYDKLLATIK
QTSTYLNDDIK
Run BLAST on NCBI

transcript from alignment at scaffold_167:203595..211184-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050021 ID=TCONS_00050021|Name=TCONS_00050021|organism=Clytia hemisphaerica|type=transcript|length=7590bp|location=Sequence derived from alignment at scaffold_167:203595..211184- (Clytia hemisphaerica)
CTTTTTATGATTCTCGAATATTTCTGTAATTCGAACAAATGAAATTTTTC
GTACAACTTCGAATTAGCGAGAGTTAACAAACGTTGATAAGGACTTCCGC
ACCACGCTTAGTCAGGTAAGGTAGGCAGAAAATGCGTTCTTAATTAAACA
TAATTACATCAATTTCTACCACGAAGAAATTAATTATGTAAGTTATTGAA
TAGTTTTTCTTTGACCATGCGGTCAGGTGATTGCCTTGACTGCCATATGA
TTGCTTAGTTTTCTTAATTTTGAATAATAACTGGTCACTTTTGTCGCCTT
TGAATGATCATATTATGTCTTTTAATATATTTTTTACTGAACACAAATTT
CCTAATTTTTCCTTTATTCATTAGTCTGATTTTGAATATTGAGTATCTCT
ACTTATTGTCATGGGTCGAAAGATGGAAATATCGTTCGAAAAAATGTCTA
GTATTTTATATGATTTTTTGGTTGCACATTATCTTTTGGCTTTTTATGTT
TCACTTTGCTGTATGTCATTTTTTTAGAGTAATATATTCCAGTTAGTCAT
TTCAGGGAAGACTCGATAACATGGTGACCAAAGATTTGTTCGAAAAATTT
GTGATTGCTTTTGAAAAGGTAAGATTTTCTTCCAGTGAACTTTATGTGAA
ATTCGACGCTTTTTTAAAAGAATGGTGTATTTCCATTTCATCAAGTTTAT
CTATCCTTAACTTTTTTGGGGAAATCATTTTTCTGTACTACACTGAGTCC
ATTTGTTTCAGCACCATTTATGCCACTTATGCCATTTATACCACCTTTTT
CCCATTTGTTTCATCGAAATGTGTTCAAAAGTGTTAAAAAATACTTACAT
TTTTACCACCTCATTTTACATTGATCATTTGTGTTCTTTGTGTCAAAAGT
GGAAGTTCGCCAAGCTTTTCCAAGCAAAAAGAAATTTGCATTTGTTTCTA
CATTCTGGGTCAAAAGTGGAAGAATGGTATTGTAAATGGCGGCAATAATC
GAATGCATAATTACGGTGCGTTTCACTTTCGTTTTCTTGTTAGTTTTTTT
ATATTTCTTTATAGTTTTTTTATATTTATTTATAATTTATGCGACCATTC
TTGACGTATGTAACTAAGAGTTCGCAAGATGGTATATTTTCACATTTTTA
ACACGGTTTCCACTGTCTATGGTTTCACACGATGGTGGCATTTGGGGGAA
AGGTGGCAAAAATGGTCTTGAGGTAAGAAACAAATGGACCCACTGTATTC
TTTGGTTAGCATCCGAATTCAACCTGCATTTAACATGTAATACATACTGG
GTACATACAGGAAGCATAGAATGGTATTTTTGCGAACGTTTTGAGCCTTA
TTGGGGAATAATCAGCAATTCACAGTCAAAAATGCTCTAAAAATGCTAAA
ATCAATCAGATCCCAATAGCACACAACGTTGTTTCAGTGTTTATCTAACG
TTCACAACGTCCATATAACGTTAAATGAACGTTGGAACAACGTTGTGTAC
CAGCTGGGGAGCCTCGTTTTCAAAGTATTGTTGCCAAGATATCTCAACGT
TATTAGACATAATTCTAGAATCTTGTTTGTTGTTTTGTTCTCAAATTGCT
ATTTTTTGGACTTTTGTGAGCCTTGTTATTCTTATAAAAACTTTCTTATC
TTCATTTTGATTTCTACCCGAACAGTATCATGGATATGCTTATGATGACG
ACGTCAGTTATCTTTTGGATGTCGATGCAAGCCCTTATTCTGCAGCTGAA
CAATTATCAAATGAAATGGAAGATTTTCTCAAGAAGGTTACCATATACGC
TTTTTTTTACAAGAATGGTGTTAATTCATTTCATCATGGATATTCTCAAC
TTTTTTGGGAAAATCATCCTAAAATATTCTTACAGCATTCTTACTAGTAG
GTTAGGATCCTAATTGACGATTTATAATTTAAAATGGTCTAAAAATGTCA
TTCTTAGCTTGAGTACAAAATTCTATGATGGTGATATTCTTAGCACATTC
TTAATTTTTTGGTCATTTTCATCATGGACATTCTTATAAAGTGTATTCTT
ATAAAAAAAGCGTGTAGTCATTATCTGAATGATACTTAGCTAACAAAAGG
TTGATACAGACAGCAATATTGGTGATATTCTTTTTAGTGTCATCAATTCC
ACAACCAACAAAAACACACGATCTTTAAAAAAAGCGCTGTTTGCCAGCTG
GATTCGAACCTTACAAAAGTTCCTATTTTGAGATTACTTCACTTTCTTTC
CCAGGTGACGAACTTGCAACAAAGAATCAATTTGATGAAAAATCTGATCA
TCGATTTGCAACGGAAACAATCAGAAAAATTTACTTCTATCGGACAAGAT
GATTGTAAGTGAAAACTCTGAGCCACACTCTCATTCTCCACGCTACTATT
TTGTTCTTGAAAATCAATCAAGAGATAGGTTTTAAAAAGTAGGCACGACA
GAACGAAAAATCTCGTAACAGATCCTCCATTCTGCGCATACCACGATCTG
ACCTGGTTATATCTCGCCAAAACATTCAATTCAAAACTGCTTTGCTTCAT
TAGCCAATCAGCACGCTCAATAGCTCATTTAATATTTATCTCAGATCTGG
ATAAAAATAGATCAAAGCGGTATGCGCCAACCCGGGCAGATTCTCATACG
GAGCTATGGCCTTTAGAGTGAATGCATGTCATGCGCGGATTATCAGAATC
TGCTCGGATATTATAAATTGAAAGATTCAAGCATCCGCCTTCGGGCATTT
AGACATTTGTACAAGAAACCTTTTTTAGGAAAGTACAACAAAATCCAGAC
TAAAATTGTTTTGGTTAGAAGAACAATAAGAACAAAGTTTCAATGGCAGC
TCAGTTGGAACAACATGAAAACGCTAGATACCAGTGAGAATGTAAAAATT
TCCTATTTCTAAAATGGGTTTGGTTTTAAAATTTCTATTGCGTTAACATG
TCAAAAATATATATTTTGAACCTTTCCATCCGGACGAATACCGTGGGCCT
TTTCTTTTTTGCCTTTTTCGCGAGGAGACTAATAGTTGATCAATCCTCAT
TGGGGATTCATTCTAGCCAGACGTCTGAGAAAGAGGTTATCACCAATGTC
TAAAAGAAATTATAGTAAGTACAGTACTTGGAGTATTCTTAAGTTAAGAG
AAAATGAACTTGATAGCGACGAGGTTAGCGAAGTATTTGTAATGGCACTG
CATTCTCAAAAACACAAAAGCTTCTCTGAAATGTCATAAATGATATGTTA
ACTATGGTACTGATCATATTTCACACGCAAAAAAGAGAACGATAATAAGT
GTATCACAGTGGTTTGCTTAGTCGTAAGTGTAGTTTGTTGAGTCGTACGC
AAAGATGGCCGTTTCAAATGCTTCCACAAACCAAACTACAGATGTTGAAA
AAATGAGAGCAATGTACGAGAAAGAGCTGAAAATCAAAGATTTGGAAATC
CAAAATCTTACATTAACTCTTGAGAAGATGAAACTTCAGAACAAAGAGCT
TCAAAAAAGTTTGAGAACATCACTACCTAAAGATCATTTGGAATCGATTT
TCATACCGATAAAAGATCGGATGATCGATGGATTTGAGAAATTTGTCGAG
CGTGTTGACCCGAGAGCTGATATTTATGAGACGTATGAAAGCTGGTATTC
GGATATCTTTAAAAGAATGGACAGCAACAATTCCACATTTATGTATGATG
ATTACGTTTTCACGAAAATGATTTTCTATGTCAATTCTTATTCAAGTATT
ACTCTCTATTCAAAAAGGGAGAAAAGTGCTACTACAAGCAATACAATAAC
AATCAAAGGATTCGATGCTGGCTGGACACATGAGCAGACAGAACTAGTTT
TACTGCTACACCCCACAGATCGCAGTAAAATATTGGAATTCCATCAAGCC
AACTCGGTCGAATGTTCAGCAGGCAATCATTCATTTAGTGTTACTGGTAT
TAACCAAGAATATATCTGTGGTAGTTATGTTCTTATTTGCTTAAAGAAAA
AAACGAAGTCCAAAAATTTAGAATGTTGATGCTGGTGAGTTTTGAGAATA
AAACACAATTATTTTAAAATTTCTTTGACTGTAGTATTTCTATGACAGTA
TATATTGATCAGGATTTTGTAAAATATGAAAAAAATGAACATTATTTTCA
AACAAGATACTTTCGGGTCTGCAATAGACACTTTTTCATAAGAAAAGTGA
ATCCACCAAAAATCGAGGATTGGATATTTTTAACGTATTCTTCTAGTGGC
GTTGTGGGAAAATGTTTCTGGAGGGGCCAAAGTCAATCTTTTTTAAATGG
TGCCCCCCCAATTTTCCAAAGTGGCGCCCCTACCCGCCAGATTAATTTGC
TTAGGCATAATGAGAAAAGAAATATCTAGTGGATAAGAGTTAGATATATA
TTTGATAAATGGAAAAGGGATAACAGGTCCCACCATGGTTGGGGCCGACT
AGAAATTTTTTGAAAATCGACTGCCAAGATCTGCTAAATAAAGAAATAGA
TACTGACAAATTTGACACTTGCTACAATCAGTGACAAAATACATGGCACA
AAAGGGAAATCCACCGGGAAGTTTTGAAACCACAATCGATTTGTAAGTGC
TCTAAATTAGGTTCGAAAGGTAGAGTTTTAACGCTAGACTTAAAAATCTG
AGGATCCAAAAGTTCAAAAATGGTCCTGTAGGGCTTGAAATATAGCTTAG
AAACCAATAAATCCCTCCCAGATCGAAATAATCGATGAAATCAAGTTGAA
GGCCCGAAATTGACATTCTCGCTCAAACTTCAATTTTCGAAAAATGGTAA
ATTAGCCAAAAGTGCCAATATGTTATGGCACTGATTGTAGAGTGAAAAGA
AAATTAAAGAAAAAATGTGTAATACGAGCAAAGCGAGTGAAAAAATTGAT
TTTTTATGATTTTCATATTGTTGTCAGCAAATTGGTCTTGGGGCGCAGTT
AGATTTTCATTTAATAATACTATCATATGCACAAAAAAACTTAGCTAGAT
TGAAAAGAAGTTACCAATAAACTTTATTGCGAGCGAAACAAGCGAAAAAA
ATGCAAGTCTTTTAAAATTATCTCAGTAAATCTGGTCCTGGGCGCAATTT
AAGGCGCATAAAGTATGATTTTGATTACTTTCTTATTTGATTATATATAT
TGTAAATCGATTCCACTGAGAAACTACGGAAATATATTAAAGAATCCATT
TCATTTTTTATGCCATGCCCCATAGATTAGAACTTTTCAGGTCCAGTACT
CCAAGAAATCATATTTGCTTTAAAAATATATATATACATGGTGAATCTCA
AACATTTTACCATCTACAATCATGGACAAAATATTTGAGACAAAGGGGAG
TTCCCAGCGAAATTTCAAACACCACAAATGATTTTTAAGCGCCTTAAACT
ACAGTTGGAAAGTAGAGTTTTAACTCTGAGATTTAACATGAGACTTAAGA
CTTAGAACCTTAGGATCTCAGGATTTAAAAGCTCAAATTTGCTCGAATAA
GGCTTGGAATATAGCCTAGAAGCCACCAAACTAAAATCGAAATATTCAAT
GAAAGAAAGTGGAAGTGCTAAAATAGCAATTCTCGCCCGAATTTTAAATT
CTGAAAAACGTTAAAATACACTAAAGTGTCAAAATATATCTCGATTATGA
TTGTACTTACATTTCTACTTTGTCTCGAAGCACCTATCGTTTCTGGTGTA
ATTTCACTTGTCTGATTTATCACGAGACCGGAATTTATTCCAGATGTTCT
GGGAAAACTAGTCGAAGTCAATTAAACATTGATGCTGGATTCTCCATATT
TGAGTCTCGATTGAAATTACTGACTAATCGGATTAGTCAGTAATTTCAAT
CGAGACTCAAATATGGAGCCAATAAAAGCTGAATTAAGATACAAAGTCTA
CGATGTGTGTGTAATAATCTCACCTATTTAGCTAAAATCGCTCAAAATTG
AAGCTTTTGGAAAAAATTAATGTGTGTTTGGAGCTCTATCAGTATCACCA
TGGATTTATTATAGAGACTCTGGATAAACATCGAATGAAACGGTGGAGAG
CGGAGTATTGTCTTTCTATTGTTTCAGAAAACAATCGATGTAAGGCTTTG
TCCGCAAAGGACAACTGTCATGGCGGCTCGAAGGACTCTGATTTTGAAAA
ATAATTAATACTCTTCTTATTTCTAAAAAGTTCTCTAACTTTTTCTGATC
GTACTTTTGCTGGCTAAAAGTTTGAAAATAAATGCTAGAATACCAAGCGA
ATACATTTATGAAATTTGGTGTGAGAAAAACATCATCGGACGAGTAAAAT
CAAACAAAATGCTTATAATGACACGAAATTTTGAATTGGGAATATCTTTC
CAATATATCTCCGAGAAGAGCTGGGATTGATATATATTAGACGTGGGTCT
CATAGCTCCACTGTGGTCTGAAAATCTTTTGGTGGCACGTGGTGGCACGG
TGGCTTTTTTGAGGTTGAAGTTTAAAAATATCTGGTGTCAATATTCANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTG
AACAATAATGTCATTACTGCGGACAAGGCTTGTACATGAGAAATTGGCAA
AATTCAGCTCATTGTTTTTCCAGTGTCTATAATAATTCCATGGTATCACG
TCGATCTAGAAATTGAACAGACAGAATTCATTCATTAAACAGTTACCAAA
TACTAACCAACAAAAAACATTAGTTATTCTCTATGGTAAGTTGCATCGAA
CAAAGAACATTTTTTGTAGACTGAATGGCGCAATTTAGTGGCCTGGTAGT
ATTGCTTTTACTTAGGCGGACTGTAAAACAAAAAAAGAAACCCTGCTTAT
ATATCTCGACTCAGCCTAAAAACATGGTAAAATTGAACGTTTAAAAATTC
TAAGTCTAAGACTGAACGAATACTTGAGCAATTGAACTCATTGCTTTCTT
GCTTTTCACAACAGTACTGGCAGAGGAGTACGACAAATTACTGGCAACCA
TCAAACAAACATCCACATATTTGAATGATGATATCAAAGG

Coding sequence (CDS) from alignment at scaffold_167:203595..211184-

>TCONS_00050021 ID=TCONS_00050021|Name=TCONS_00050021|organism=Clytia hemisphaerica|type=CDS|length=1332bp|location=Sequence derived from alignment at scaffold_167:203595..211184- (Clytia hemisphaerica)
TACTGGCAGAGGAGTACGACAAATTACTGGCAACCATCAAACAAACATCC
ACATATTTGAATGATGATATCAAAGTGACGAACTTGCAACAAAGAATCAA
TTTGATGAAAAATCTGATCATCGATTTGCAACGGAAACAATCAGAAAAAT
TTACTTCTATCGGACAAGATGATTTATCATGGATATGCTTATGATGACGA
CGTCAGTTATCTTTTGGATGTCGATGCAAGCCCTTATTCTGCAGCTGAAC
AATTATCAAATGAAATGGAAGATTTTCTCAAGAAGATGGTGACCAAAGAT
TTGTTCGAAAAATTTGTGATTGCTTTTGAAAAGTACTGGCAGAGGAGTAC
GACAAATTACTGGCAACCATCAAACAAACATCCACATATTTGAATGATGA
TATCAAAGTGACGAACTTGCAACAAAGAATCAATTTGATGAAAAATCTGA
TCATCGATTTGCAACGGAAACAATCAGAAAAATTTACTTCTATCGGACAA
GATGATTTATCATGGATATGCTTATGATGACGACGTCAGTTATCTTTTGG
ATGTCGATGCAAGCCCTTATTCTGCAGCTGAACAATTATCAAATGAAATG
GAAGATTTTCTCAAGAAGATGGTGACCAAAGATTTGTTCGAAAAATTTGT
GATTGCTTTTGAAAAGTACTGGCAGAGGAGTACGACAAATTACTGGCAAC
CATCAAACAAACATCCACATATTTGAATGATGATATCAAAGTGACGAACT
TGCAACAAAGAATCAATTTGATGAAAAATCTGATCATCGATTTGCAACGG
AAACAATCAGAAAAATTTACTTCTATCGGACAAGATGATTTATCATGGAT
ATGCTTATGATGACGACGTCAGTTATCTTTTGGATGTCGATGCAAGCCCT
TATTCTGCAGCTGAACAATTATCAAATGAAATGGAAGATTTTCTCAAGAA
GATGGTGACCAAAGATTTGTTCGAAAAATTTGTGATTGCTTTTGAAAAGT
ACTGGCAGAGGAGTACGACAAATTACTGGCAACCATCAAACAAACATCCA
CATATTTGAATGATGATATCAAAGTGACGAACTTGCAACAAAGAATCAAT
TTGATGAAAAATCTGATCATCGATTTGCAACGGAAACAATCAGAAAAATT
TACTTCTATCGGACAAGATGATTTATCATGGATATGCTTATGATGACGAC
GTCAGTTATCTTTTGGATGTCGATGCAAGCCCTTATTCTGCAGCTGAACA
ATTATCAAATGAAATGGAAGATTTTCTCAAGAAGATGGTGACCAAAGATT
TGTTCGAAAAATTTGTGATTGCTTTTGAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031688XLOC_031688Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050021-exon-scaffold_167-1575043694:211070..211184TCONS_00050021-exon-scaffold_167-1575043694:211070..211184Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1575043694:210567..210629TCONS_00050021-exon-scaffold_167-1575043694:210567..210629Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1575043694:209399..209509TCONS_00050021-exon-scaffold_167-1575043694:209399..209509Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1575043694:208831..208930TCONS_00050021-exon-scaffold_167-1575043694:208831..208930Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1575043694:203595..203670TCONS_00050021-exon-scaffold_167-1575043694:203595..203670Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1510915933:211070..211184TCONS_00050021-exon-scaffold_167-1510915933:211070..211184Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1510915933:210567..210629TCONS_00050021-exon-scaffold_167-1510915933:210567..210629Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1510915933:209399..209509TCONS_00050021-exon-scaffold_167-1510915933:209399..209509Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1510915933:208831..208930TCONS_00050021-exon-scaffold_167-1510915933:208831..208930Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1510915933:203595..203670TCONS_00050021-exon-scaffold_167-1510915933:203595..203670Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1491911889:211070..211184TCONS_00050021-exon-scaffold_167-1491911889:211070..211184Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1491911889:210567..210629TCONS_00050021-exon-scaffold_167-1491911889:210567..210629Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1491911889:209399..209509TCONS_00050021-exon-scaffold_167-1491911889:209399..209509Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1491911889:208831..208930TCONS_00050021-exon-scaffold_167-1491911889:208831..208930Clytia hemisphaericaexon
TCONS_00050021-exon-scaffold_167-1491911889:203595..203670TCONS_00050021-exon-scaffold_167-1491911889:203595..203670Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050021-proteinTCONS_00050021-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:203595..211184 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.55434	0.270284	0.470739	0.614059	1.49512	0.295365	4.81067	4.50369	9.92654	8.2453	4.49296	5.6301	7.83432	7.17884	7.08238	9.03612	0.104035	0.959694	0	1.23327	0	0.588208	0.158899	0	0.59517	1.32794	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR010989SNARE
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016020 membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050021 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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