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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049959 ID=TCONS_00049959|Name=TCONS_00049959|organism=Clytia hemisphaerica|type=transcript|length=547bp
ACATAGCTTAGAATCACAATTCGAAGAATTCAAGGGAAGAGGGACCGGAC
GAGAAGTTGTAACGGAACAATATCGCAAAGAACTACTGACAGGAAAAAGG
CAACCGGTAGAGGAGCATTTGAAGTCGAGAAGGCCCAAGACTTCTAAGAA
GTGGCCTTTCAAAGACTCGatcctacccccttggaaaaaagaatgaattt
ttttcctcATTAACATTGACACGTTTATACACAATAATCCGATGTTAACT
GGAATTTCGATAATCCCAATGGACTTGTAATGAGACTGCAGAGAATTGAA
CCCGGGATCTCGAATCAACAACCAACACCCTAACTAACATGTGACCATGA
aattattatagagactctggataaacatcaaatgAAACGGTGGAGTTGAG
TATTGTCGTCCAattcagaaaacaatcaatgTACCGACTTTGTCCGCAAa
tgacaactgtcatggcggctccaaggactctgattttgaaaaatgatcaa
tactcttatttctaaaaagttctctatcttcttctatttatattttt Run BLAST on NCBI transcript from alignment at scaffold_167:1309017..1309922+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049959 ID=TCONS_00049959|Name=TCONS_00049959|organism=Clytia hemisphaerica|type=transcript|length=906bp|location=Sequence derived from alignment at scaffold_167:1309017..1309922+ (Clytia hemisphaerica)
ACATAGCTTAGAATCACAATTCGAAGAATTCAAGGGAAGAGGGACCGGAC
GAGAAGTTGTAACGGAACAATATCGCAAAGAACTACTGACAGGAAAAAGG
CAACCGGTTAGTTTTATAAATTTACGAAATCCACTGATAAAATCTTGACA
AGTTTAgagtttttagtcaaatttaCTACTTTAAACTTTACTTCAAATTT
ACTTCCCTACCCTCGTCTCAGTTCAACCCGTCCTTGTTGATAATTTGAGT
GGAACGAAAGGCATCCAAAAGAAAAGGGAATTTTAAGCTATCCAACAAGA
TATGAATGATAAATAAATTCTCTCTAATTTCAGAGATATTGTAATCTAAA
GTTAATTTTCTAAACATACTGTAAATTTAGAAACAATGGCTTCACTTCAC
TACTTCACATTTAACTCCTTCTTGATTTCCATCGATACTCAatcattttt
cttacttttgcACAGGTAGAGGAGCATTTGAAGTCGAGAAGGCCCAAGAC
TTCTAAGAAGTGGCCTTTCAAAGACTCGatcctacccccttggaaaaaag
aatgaatttttttcctcATTAACATTGACACGTTTATACACAATAATCCG
ATGTTAACTGGAATTTCGATAATCCCAATGGACTTGTAATGAGACTGCAG
AGAATTGAACCCGGGATCTCGAATCAACAACCAACACCCTAACTAACATG
TGACCATGAaattattatagagactctggataaacatcaaatgAAACGGT
GGAGTTGAGTATTGTCGTCCAattcagaaaacaatcaatgTACCGACTTT
GTCCGCAAatgacaactgtcatggcggctccaaggactctgattttgaaa
aatgatcaatactcttatttctaaaaagttctctatcttcttctatttat
attttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049959-exon-scaffold_167-1491911889:1309017..1309122 | TCONS_00049959-exon-scaffold_167-1491911889:1309017..1309122 | Clytia hemisphaerica | exon |
| TCONS_00049959-exon-scaffold_167-1510915933:1309017..1309122 | TCONS_00049959-exon-scaffold_167-1510915933:1309017..1309122 | Clytia hemisphaerica | exon |
| TCONS_00049959-exon-scaffold_167-1575043694:1309017..1309122 | TCONS_00049959-exon-scaffold_167-1575043694:1309017..1309122 | Clytia hemisphaerica | exon |
| TCONS_00049959-exon-scaffold_167-1491911889:1309482..1309922 | TCONS_00049959-exon-scaffold_167-1491911889:1309482..1309922 | Clytia hemisphaerica | exon |
| TCONS_00049959-exon-scaffold_167-1510915933:1309482..1309922 | TCONS_00049959-exon-scaffold_167-1510915933:1309482..1309922 | Clytia hemisphaerica | exon |
| TCONS_00049959-exon-scaffold_167-1575043694:1309482..1309922 | TCONS_00049959-exon-scaffold_167-1575043694:1309482..1309922 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:1309017..1309922 + |
Blast
The following BLAST results are available for this feature:
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