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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049941 ID=TCONS_00049941|Name=TCONS_00049941|organism=Clytia hemisphaerica|type=transcript|length=1468bp
attttggctaatttttctgCAACAGTTGATTTAGCACatctttattgaaa
ataaacatCATTTGATTTAgcaccatttttttgaaaatgtacaATGAAAT
TNACCCACCACGCTATTGCGCATTATAGTCATTTTCACCCACGAAATGAA
GGCCTTTTTACATCTTAAAAACCTTTAAGATTTCGAGAATGGCAAAAGAA
TAGAGATGTGATTTTCCTAAAAACAATATtaaatcaacaaatattttata
ctAGGTATAGGACTTGGGACTTGGATcacgaaattttttttctaaaattt
tagcttgaatattttggctaatttttctgCAACAGTTGATTAAAGCACat
ctttattgaaaataaacagCATTGGATTTAGcaccattttttcgaaaatg
tacAATGAAATCGTTAATAAGAAAGACCTTTACACTGTTCATATTGGAAA
TTTGAATTCCAAAGTCACAATCGAagaattgaaaatattatttgttgGCA
CTGGAGATGTCCGAGATATTTACATCCAAGACAAATTTAGTACTAATTTT
ACTTACGCATTTGTCAGGTTCAAAACAATTGAGGAGTGTGTGAATGCGTG
TACTCAGCTTCACGGTACTATCTTACATGGATCGGCCATTTGGGTTACGC
TGGCTGAATCTACAACTAACAGAATTAATAATAAACCTTCACAGAGATCT
TCCAATAAAGATAGGAGTATATTAAAACCTTCTCAACCACGACGGGAAGG
TGCTCATTATGTGTCGTcacaaaaagatgaaaatgaaatccaCAAGAAAT
TGACTGATAGTTTGActgaattaaagaaagataatGAACTGACCAGATGG
ATTGGAATTGATCGAAATGATGAAGCTGAAGTACaaaattatatggttga
ttttAAAGATGGGCTCgtggcaatggccaaaataccAGAAGCTGTTGGAG
TAGAAGCTAAatcctttgaaaaaaatcaagatatgGATGATCTACAGAAA
TTGATCATTAGCCATCATTCTTGTGCAACACCTTCAGAAGAATATTTACC
ATTCAAAAACATTGACTTTGATGCTAGAGCAAAGAAGTAAtttaaacagt
aattttgcGTAAGCATGatatgatttttgttgtttccagtCTTGTGTcag
attttatcttttttaaatttagtgtgtaaaatttttatataaatttcatT
ATACCTTTATAATTAGATTTTTACCTTTCTAAGCCATTTACAAAGCTgag
aaaattgaagaaacaaaaaggaaattggtaaaaactttgttaaaaatttt
gtaaattttgttatTTAGTGCATATTATTGTTTCATATCAGATTATAAAG
TGATTTATTATCATCATTATCAACTTATTTCTGTGGTATGGTAATCAGGA
GGGGTTCTAGATTTAAGGCTTCTCCCTGaatttttaaagtagaaatgttt
TACAAAAGTTTGCTTCTA Run BLAST on NCBI transcript from alignment at scaffold_167:1180948..1182415+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049941 ID=TCONS_00049941|Name=TCONS_00049941|organism=Clytia hemisphaerica|type=transcript|length=1468bp|location=Sequence derived from alignment at scaffold_167:1180948..1182415+ (Clytia hemisphaerica)
attttggctaatttttctgCAACAGTTGATTTAGCACatctttattgaaa
ataaacatCATTTGATTTAgcaccatttttttgaaaatgtacaATGAAAT
TNACCCACCACGCTATTGCGCATTATAGTCATTTTCACCCACGAAATGAA
GGCCTTTTTACATCTTAAAAACCTTTAAGATTTCGAGAATGGCAAAAGAA
TAGAGATGTGATTTTCCTAAAAACAATATtaaatcaacaaatattttata
ctAGGTATAGGACTTGGGACTTGGATcacgaaattttttttctaaaattt
tagcttgaatattttggctaatttttctgCAACAGTTGATTAAAGCACat
ctttattgaaaataaacagCATTGGATTTAGcaccattttttcgaaaatg
tacAATGAAATCGTTAATAAGAAAGACCTTTACACTGTTCATATTGGAAA
TTTGAATTCCAAAGTCACAATCGAagaattgaaaatattatttgttgGCA
CTGGAGATGTCCGAGATATTTACATCCAAGACAAATTTAGTACTAATTTT
ACTTACGCATTTGTCAGGTTCAAAACAATTGAGGAGTGTGTGAATGCGTG
TACTCAGCTTCACGGTACTATCTTACATGGATCGGCCATTTGGGTTACGC
TGGCTGAATCTACAACTAACAGAATTAATAATAAACCTTCACAGAGATCT
TCCAATAAAGATAGGAGTATATTAAAACCTTCTCAACCACGACGGGAAGG
TGCTCATTATGTGTCGTcacaaaaagatgaaaatgaaatccaCAAGAAAT
TGACTGATAGTTTGActgaattaaagaaagataatGAACTGACCAGATGG
ATTGGAATTGATCGAAATGATGAAGCTGAAGTACaaaattatatggttga
ttttAAAGATGGGCTCgtggcaatggccaaaataccAGAAGCTGTTGGAG
TAGAAGCTAAatcctttgaaaaaaatcaagatatgGATGATCTACAGAAA
TTGATCATTAGCCATCATTCTTGTGCAACACCTTCAGAAGAATATTTACC
ATTCAAAAACATTGACTTTGATGCTAGAGCAAAGAAGTAAtttaaacagt
aattttgcGTAAGCATGatatgatttttgttgtttccagtCTTGTGTcag
attttatcttttttaaatttagtgtgtaaaatttttatataaatttcatT
ATACCTTTATAATTAGATTTTTACCTTTCTAAGCCATTTACAAAGCTgag
aaaattgaagaaacaaaaaggaaattggtaaaaactttgttaaaaatttt
gtaaattttgttatTTAGTGCATATTATTGTTTCATATCAGATTATAAAG
TGATTTATTATCATCATTATCAACTTATTTCTGTGGTATGGTAATCAGGA
GGGGTTCTAGATTTAAGGCTTCTCCCTGaatttttaaagtagaaatgttt
TACAAAAGTTTGCTTCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049941-exon-scaffold_167-1491911889:1180948..1182415 | TCONS_00049941-exon-scaffold_167-1491911889:1180948..1182415 | Clytia hemisphaerica | exon |
| TCONS_00049941-exon-scaffold_167-1510915933:1180948..1182415 | TCONS_00049941-exon-scaffold_167-1510915933:1180948..1182415 | Clytia hemisphaerica | exon |
| TCONS_00049941-exon-scaffold_167-1575043694:1180948..1182415 | TCONS_00049941-exon-scaffold_167-1575043694:1180948..1182415 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:1180948..1182415 + |
Blast
The following BLAST results are available for this feature:
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