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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049894 ID=TCONS_00049894|Name=TCONS_00049894|organism=Clytia hemisphaerica|type=transcript|length=1246bp
TAACCTATTCCTAAAGGTTTAAACAATCGTGATGCTCGAAAATGATAAAC
AATAGATAAAtcaatttttctactttttttttctttcagagtaaaaataa
aatatgaaaaatcattTGACTGTGAATATTGGCAACAACCCTTCCTCTAT
ATTTTACTGATGTGATGCAGATTCATATGacaatttgaagaaaagtattg
aaaaaCGTTTTAAGATTCCAGTTTCATGTCAAGACATTGAACATCAAGGA
ATTATTTTAGATACAGAAACTTTTGAAGAACTGTATCAAAAACGATTGCA
GTTTGATATTGAACTTGATGTTAATATTACTGATAGCTTGATCGATCCCG
TCTTAGTACATGACCGCAGAAACCTCGCTTTAAAAAAAGGATCAGGAATA
AGGAATATTAAAATGATTTATTTATCTAGTAACTCATCAGCCTTTCAAAT
CAATTATAAAGATTTGGATATCAGTACAACAGTgttagatttgaaaaaaa
taatttctgctAAAAAAAGAGTGTCAACAAAGagaatcaattttatttat
gGTAAAAAACATATGATTCTCACAGACAATCAGTTGTTAGTCGATTTATT
CCTGGATGGGTCCTTAGAGTATACTCAATTTTCTTTCCATGTCATAGTGA
TCATAGTGGATGATTGTATATTCGATATGTTTGAAAATGATAATGAAAAT
GCATATATCAAATTcagtgaaatcaaaatttcaatgcAAGGAATAGAAGC
TATAAGGCAAATCGGATATCCAATATTCGATATAGGTTCTTTTTATCCCG
AGGACATGAAACTTTGGATCAAAGACTTGTATCAGATTCCTATTGAAGAA
CAGACTTTTGGATATTGTGACGGACCAATTTTCACCGATAGCGAAGACTT
GTCACGTGTCTGGCTCGATCGATCTTATCAACTAGAAAATGTGGAGCTTC
AGCTATACGTTCATTACACTGACAAAACTGAGTTAAAGGAAATTTATGGT
CAGAACGATACAAAAATGATGGAACCTTCAAAAATTGTTAGtggaaacaa
gaaaaatatttggtATTATTATTATAGAGGGAACAATGGACCATCTCTTA
ATGATTTTCTTCATGAAACCTTTAGAATTCGAAAAGATCTACGaaggttt
cttttttttgtaaatcaAAATCCTGTCAAACATTCACAAATTGACCTTTT
TAGATGTAAAGAAATCAAACTAGCAATTCAAGTAGATGATGATGAA Run BLAST on NCBI transcript from alignment at scaffold_167:416256..417501+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049894 ID=TCONS_00049894|Name=TCONS_00049894|organism=Clytia hemisphaerica|type=transcript|length=1246bp|location=Sequence derived from alignment at scaffold_167:416256..417501+ (Clytia hemisphaerica)
TAACCTATTCCTAAAGGTTTAAACAATCGTGATGCTCGAAAATGATAAAC
AATAGATAAAtcaatttttctactttttttttctttcagagtaaaaataa
aatatgaaaaatcattTGACTGTGAATATTGGCAACAACCCTTCCTCTAT
ATTTTACTGATGTGATGCAGATTCATATGacaatttgaagaaaagtattg
aaaaaCGTTTTAAGATTCCAGTTTCATGTCAAGACATTGAACATCAAGGA
ATTATTTTAGATACAGAAACTTTTGAAGAACTGTATCAAAAACGATTGCA
GTTTGATATTGAACTTGATGTTAATATTACTGATAGCTTGATCGATCCCG
TCTTAGTACATGACCGCAGAAACCTCGCTTTAAAAAAAGGATCAGGAATA
AGGAATATTAAAATGATTTATTTATCTAGTAACTCATCAGCCTTTCAAAT
CAATTATAAAGATTTGGATATCAGTACAACAGTgttagatttgaaaaaaa
taatttctgctAAAAAAAGAGTGTCAACAAAGagaatcaattttatttat
gGTAAAAAACATATGATTCTCACAGACAATCAGTTGTTAGTCGATTTATT
CCTGGATGGGTCCTTAGAGTATACTCAATTTTCTTTCCATGTCATAGTGA
TCATAGTGGATGATTGTATATTCGATATGTTTGAAAATGATAATGAAAAT
GCATATATCAAATTcagtgaaatcaaaatttcaatgcAAGGAATAGAAGC
TATAAGGCAAATCGGATATCCAATATTCGATATAGGTTCTTTTTATCCCG
AGGACATGAAACTTTGGATCAAAGACTTGTATCAGATTCCTATTGAAGAA
CAGACTTTTGGATATTGTGACGGACCAATTTTCACCGATAGCGAAGACTT
GTCACGTGTCTGGCTCGATCGATCTTATCAACTAGAAAATGTGGAGCTTC
AGCTATACGTTCATTACACTGACAAAACTGAGTTAAAGGAAATTTATGGT
CAGAACGATACAAAAATGATGGAACCTTCAAAAATTGTTAGtggaaacaa
gaaaaatatttggtATTATTATTATAGAGGGAACAATGGACCATCTCTTA
ATGATTTTCTTCATGAAACCTTTAGAATTCGAAAAGATCTACGaaggttt
cttttttttgtaaatcaAAATCCTGTCAAACATTCACAAATTGACCTTTT
TAGATGTAAAGAAATCAAACTAGCAATTCAAGTAGATGATGATGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049894-exon-scaffold_167-1491911889:416256..417501 | TCONS_00049894-exon-scaffold_167-1491911889:416256..417501 | Clytia hemisphaerica | exon |
| TCONS_00049894-exon-scaffold_167-1510915933:416256..417501 | TCONS_00049894-exon-scaffold_167-1510915933:416256..417501 | Clytia hemisphaerica | exon |
| TCONS_00049894-exon-scaffold_167-1575043694:416256..417501 | TCONS_00049894-exon-scaffold_167-1575043694:416256..417501 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:416256..417501 + |
Blast
The following BLAST results are available for this feature:
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