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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049853 ID=TCONS_00049853|Name=TCONS_00049853|organism=Clytia hemisphaerica|type=transcript|length=963bp
ATTCTTGACACGCCCATTATGGCTGTGTCAGGTTTGGAGCTTGGCGTAGG
CGATGCAAGGTGAACTCCTGGTGAAGTTTAAGTTATATGTACGCTGTATA
CTTTAGTTTCGCATCGTCAATCCATTAATTTCTATGTATAGTATCATATA
TGATGATACTTTATATCATATTTTACGCTCCTATTCCGGTAGGTCTGGAC
CGAGAAGCACCTCGACCCACGCTGTCAGTTTTCACCGTGACCAAATGAAA
AATTGGAGATGGACTATTTTTCTCGCAGGTTTTTTAAGTAAACTCAATTT
TTCCGCGACATTCCCTGTTCTAAAGTTTGAGCGTATTATATCTTTTATCT
AGTCAAATAGGTGGGATtcaagtttcttttatttttaaatttaaatatag
TTAGTTAGTGCATAGGAACATTTAAGGAATTGTATGATGGGGGTGAATAA
ATGAAATTGGTTAATGaactatattttttattttgttgatatgatatatt
ttaaaacaattttttgataattttattaTTCGTTAATTTCTAGTTAATTC
GtacaaatttttggaatttatacATATTTTTCTAATATATTACACACACG
GGGAAATCAATGAGGGTCTGCAATAAATGATTTAAAACGCATGCATTTCA
TACTTAAACTATTACTTGTATTATTTGTAGTTCCTAATTTTGTAGAGAAT
TTTAATGCTACTATAACTTTCTTTAGCCACCCTACTACTTTAGGGGAAAA
GAAAATTTCGCGGGAAAGAACGTTCATGCATTTGCAAAATCAGAAATATT
CTTAAATCAAAAGATTtagatgattttttattttcttagtcCTGCttgaa
ctacacgtttttttacgagtatttttgtccgttttcctaagaatacaggt
gttttagagcccacgaagccttaaagtgctcttaacttgctcttaagatt
ttggccaccgaag Run BLAST on NCBI transcript from alignment at scaffold_166:586238..587200 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049853 ID=TCONS_00049853|Name=TCONS_00049853|organism=Clytia hemisphaerica|type=transcript|length=963bp|location=Sequence derived from alignment at scaffold_166:586238..587200 (Clytia hemisphaerica)
cttcggtggccaaaatcttaagagcaagttaagagcactttaaggcttcg
tgggctctaaaacacctgtattcttaggaaaacggacaaaaatactcgta
aaaaaacgtgtagttcaaGCAGgactaagaaaataaaaaatcatctaAAT
CTTTTGATTTAAGAATATTTCTGATTTTGCAAATGCATGAACGTTCTTTC
CCGCGAAATTTTCTTTTCCCCTAAAGTAGTAGGGTGGCTAAAGAAAGTTA
TAGTAGCATTAAAATTCTCTACAAAATTAGGAACTACAAATAATACAAGT
AATAGTTTAAGTATGAAATGCATGCGTTTTAAATCATTTATTGCAGACCC
TCATTGATTTCCCCGTGTGTGTAATATATTAGAAAAATATgtataaattc
caaaaatttgtaCGAATTAACTAGAAATTAACGAAtaataaaattatcaa
aaaattgttttaaaatatatcatatcaacaaaataaaaaatatagttCAT
TAACCAATTTCATTTATTCACCCCCATCATACAATTCCTTAAATGTTCCT
ATGCACTAACTAActatatttaaatttaaaaataaaagaaacttgaATCC
CACCTATTTGACTAGATAAAAGATATAATACGCTCAAACTTTAGAACAGG
GAATGTCGCGGAAAAATTGAGTTTACTTAAAAAACCTGCGAGAAAAATAG
TCCATCTCCAATTTTTCATTTGGTCACGGTGAAAACTGACAGCGTGGGTC
GAGGTGCTTCTCGGTCCAGACCTACCGGAATAGGAGCGTAAAATATGATA
TAAAGTATCATCATATATGATACTATACATAGAAATTAATGGATTGACGA
TGCGAAACTAAAGTATACAGCGTACATATAACTTAAACTTCACCAGGAGT
TCACCTTGCATCGCCTACGCCAAGCTCCAAACCTGACACAGCCATAATGG
GCGTGTCAAGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049853-exon-scaffold_166-1491911889:586238..587200 | TCONS_00049853-exon-scaffold_166-1491911889:586238..587200 | Clytia hemisphaerica | exon |
| TCONS_00049853-exon-scaffold_166-1510915933:586238..587200 | TCONS_00049853-exon-scaffold_166-1510915933:586238..587200 | Clytia hemisphaerica | exon |
| TCONS_00049853-exon-scaffold_166-1575043694:586238..587200 | TCONS_00049853-exon-scaffold_166-1575043694:586238..587200 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_166 | supercontig | scaffold_166:586238..587200 . |
Blast
The following BLAST results are available for this feature:
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