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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049625 ID=TCONS_00049625|Name=TCONS_00049625|organism=Clytia hemisphaerica|type=transcript|length=1163bp
GAAGAACTAGCTATTTTGAAATATGTGTTTCAACATAATTTAGAGGTATC
AGAAATAACAACATTTGCACCGTCTTTAACAGGAAAATACCCAATCAAAG
CAGAGAAATTGGAGGCTTTAAAAACGGGAAAAGTCTTACTCACTTGTTAT
AGAGGTTTCAGAGGTTGCGAAATGGACCATTGTGTTTTATTTGTTAACCC
TCAAGATAAAGTTCCAAAGAACTTGTACATTGAGATGCTCACTCGTGCCA
TCAACTTCGTAGACATAATCGTTCTTCCTGAAAAGAAATCAAGCAGGGTA
TCTCGTTTGATTGGAATTTTCGATAAATGGCTGCAAGCTGGTCTCGTTTC
TCCTACACACGCTAAACGTTCAAGTACAAACATTATTTTCTCGTCTTTGG
AAGAGCTAGATGTTATTGTACCACTTGATCAAACCTGCGATCATAATGTT
GAAAGACAGATTCTTCAAGTCATCGAGGATAGCTCGTTATTCAATCACTC
CCACATCGACGCAGCAGTAACGTAAGTAGAACTTATTGTATATCGGTACT
TTACATGCAATATTCATAGCAACCTTTGTTACTTTTTTACAACGTAAGTG
TTTCATCTTagtatactttaggcgtacaaactttcgcgtgcagaaacttt
cgcgaggacgaaaaatcgcgaaattcacgacatttactttcgcgaattta
acggaaaaatatttttcgcgagcataaactttcgcgaatgaagacgtaaa
attgagaattttctcatgaaaaaatggcttaggtggacaaaaatttcttg
gattagcttgaaacatttgtccttggTTAAAAAGCAGGCTAAAAGcgtca
taaaagttacattttattcaaagtttgaagttttacagattttccatttt
gtcaaggatttttcgcgcgcataaactttcgcgaatggcccttcctagaa
tttttaaaaacatttactttcgcgaaaagggccaaaactcgcgaaaatcg
cgaaagtttctgctcgcgaaagtttctacgcctaaagtagtctCGAAAGT
TTATTACTTACAACAGAACCTACACTAAGTGCGTAACGTAATATCATTAG
TTCTAAAAGAATCGAAGATACAGAGCACATATTCTCATTGTAACCTTCAT
CCGATAACATCCC Run BLAST on NCBI transcript from alignment at scaffold_162:98586..99748- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049625 ID=TCONS_00049625|Name=TCONS_00049625|organism=Clytia hemisphaerica|type=transcript|length=1163bp|location=Sequence derived from alignment at scaffold_162:98586..99748- (Clytia hemisphaerica)
GAAGAACTAGCTATTTTGAAATATGTGTTTCAACATAATTTAGAGGTATC
AGAAATAACAACATTTGCACCGTCTTTAACAGGAAAATACCCAATCAAAG
CAGAGAAATTGGAGGCTTTAAAAACGGGAAAAGTCTTACTCACTTGTTAT
AGAGGTTTCAGAGGTTGCGAAATGGACCATTGTGTTTTATTTGTTAACCC
TCAAGATAAAGTTCCAAAGAACTTGTACATTGAGATGCTCACTCGTGCCA
TCAACTTCGTAGACATAATCGTTCTTCCTGAAAAGAAATCAAGCAGGGTA
TCTCGTTTGATTGGAATTTTCGATAAATGGCTGCAAGCTGGTCTCGTTTC
TCCTACACACGCTAAACGTTCAAGTACAAACATTATTTTCTCGTCTTTGG
AAGAGCTAGATGTTATTGTACCACTTGATCAAACCTGCGATCATAATGTT
GAAAGACAGATTCTTCAAGTCATCGAGGATAGCTCGTTATTCAATCACTC
CCACATCGACGCAGCAGTAACGTAAGTAGAACTTATTGTATATCGGTACT
TTACATGCAATATTCATAGCAACCTTTGTTACTTTTTTACAACGTAAGTG
TTTCATCTTAGTATACTTTAGGCGTACAAACTTTCGCGTGCAGAAACTTT
CGCGAGGACGAAAAATCGCGAAATTCACGACATTTACTTTCGCGAATTTA
ACGGAAAAATATTTTTCGCGAGCATAAACTTTCGCGAATGAAGACGTAAA
ATTGAGAATTTTCTCATGAAAAAATGGCTTAGGTGGACAAAAATTTCTTG
GATTAGCTTGAAACATTTGTCCTTGGTTAAAAAGCAGGCTAAAAGCGTCA
TAAAAGTTACATTTTATTCAAAGTTTGAAGTTTTACAGATTTTCCATTTT
GTCAAGGATTTTTCGCGCGCATAAACTTTCGCGAATGGCCCTTCCTAGAA
TTTTTAAAAACATTTACTTTCGCGAAAAGGGCCAAAACTCGCGAAAATCG
CGAAAGTTTCTGCTCGCGAAAGTTTCTACGCCTAAAGTAGTCTCGAAAGT
TTATTACTTACAACAGAACCTACACTAAGTGCGTAACGTAATATCATTAG
TTCTAAAAGAATCGAAGATACAGAGCACATATTCTCATTGTAACCTTCAT
CCGATAACATCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049625-exon-scaffold_162-1575043694:98586..99748 | TCONS_00049625-exon-scaffold_162-1575043694:98586..99748 | Clytia hemisphaerica | exon |
| TCONS_00049625-exon-scaffold_162-1510915933:98586..99748 | TCONS_00049625-exon-scaffold_162-1510915933:98586..99748 | Clytia hemisphaerica | exon |
| TCONS_00049625-exon-scaffold_162-1491911889:98586..99748 | TCONS_00049625-exon-scaffold_162-1491911889:98586..99748 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_162 | supercontig | scaffold_162:98586..99748 - |
Blast
The following BLAST results are available for this feature:
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