TCONS_00049608 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049608
Unique NameTCONS_00049608
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1725

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049608 ID=TCONS_00049608|Name=TCONS_00049608|organism=Clytia hemisphaerica|type=transcript|length=1725bp
GCTCACTACTACCGTCTACCATCTTTTTAGAATGTAAATAGATCAATTGT
TACTACTAACAACGTGTAATTTGCCGAATGAAAATTCGACCGGATTTGAT
AGTGAGCGCCGTATTTCGAAGGAAGCGGATCATTTCGAGATTATTCAACA
TTTTGGTTCTGGCTGCCTGGGTATCCCTCAGACAAAATCTTACATAACCT
TTCATATTTACATAAATTTTGACAAAGGATGGCTGATGAGACGGACCTTG
AAACCTACAAAGCTCAACTTGAGCAAGTTGAAGCTGCATTACTgattgat
gaaaataatgaagACCTTCTGAAATTAAAACAAGATCTACTGGAAGTGAT
CTCTTTGTCAGAAGAATTGGAAGAGATTAATgagaTACCAGAAGGTACAA
GCTATGAAGAaccaaagaaagaagaaaagcatAAATGGAAGCAGGGTGAT
CGTGTTCAAGCTGAAAGAAAAGCTGATGGAAAGCCGAGTTGCGATTTAAA
ATGTCTTCTATTGTCCATTGTTTAATTGATGGTGCACAATGCGAAGATTG
AAATGATTGCTGATGATGGATTAACATGTGTTGTTAAATTTGATAATATC
GGTGCCGTTGAAGTTGTCCAGATCACAGGTCTACAGGCAGCAACTGAATC
AACGGAACCTTCGCAAGAAGCATCTTCATCAACAACCAACCCTCAAGGTC
AACAAAATAATACACAAAAACAAGGAAAACTTACAAGGGAAGAATTAGAA
AGGCGAAAGGAaattaagaaaaagaaattattgaagAAAAAGCAAAGGAT
GAAGGATTTCGAGGAGAAACGTGAATCAGAGAAGAACAGATGGCAATCCT
TCTTCAAGAAAGGAACTTCAGGGAAAGGCAAAGGCAAAGTCAAGGGGTTG
AACAAAAAAAGTATATTTGCATCACGTGAAGATGGCAAAGGAAAGATTGG
CGTTGGGACATGTGGTACATCTGGTAAACAAATGACATCCTATACACCAG
CCTCACAATACATGTACAAGAAATAGAGGAATCACAGTCTAGTCTGTAAC
TAAGGGTCTACTTAAATTGTCGAAATGTAAAGTAGGGATTTCTTCCATTC
AAATCTTTATGGTCAATTAAGTACAACACCAGTTGCTTGTGGATATACAT
AATGTAAAAATGGTTTGTGATTGTGGAGATACAAAGGCTTGAGAAATTTG
GAATTTTCAGAGCTTTGTCATTGTGCTTGGGACACTTGTGTACAAAAAGC
ATTGTTAAAAAACCGAGACGATGtgaaaatcttgatttataGATTTATAG
ATTATTTGCACATTATGACCAATTACATAATCCCAGAACGGGGACATAAG
GTTTTTTCTCAAATGCTAAATAACCAGAAAGAGAAATttttcatctattt
tccaaGTTTTTATTGGTTTTTAATAAAGTCAATTACCATCGAAAAAAGGT
CTTAAGTCCtctagaattttgaaattactgTACTTATGTATatgggattt
tgaatttttataagCAAACCTTTGTAAATCAGACATATTCAGATTCAAAA
AGGAAGATTTTGTACCAGATTTAACTACGGTTTATTATATAGCAACAGTA
TTTTATTATGATCTGGATTTTCAGGTAGTATAATTTCGAGTCATACAATA
TGCACACACTccttttattcattcattcactcCAGTGACCTTCCCTTTTC
CCAAAGGTAATTTCTAGACGACTGC
Run BLAST on NCBI

protein sequence of TCONS_00049608-protein

>TCONS_00049608-protein ID=TCONS_00049608-protein|Name=TCONS_00049608-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
MVHNAKIEMIADDGLTCVVKFDNIGAVEVVQITGLQAATESTEPSQEASS
STTNPQGQQNNTQKQGKLTREELERRKEIKKKKLLKKKQRMKDFEEKRES
EKNRWQSFFKKGTSGKGKGKVKGLNKKSIFASREDGKGKIGVGTCGTSGK
QMTSYTPASQYMYKK
Run BLAST on NCBI

transcript from alignment at scaffold_161:208825..218468-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049608 ID=TCONS_00049608|Name=TCONS_00049608|organism=Clytia hemisphaerica|type=transcript|length=9644bp|location=Sequence derived from alignment at scaffold_161:208825..218468- (Clytia hemisphaerica)
GCTCACTACTACCGTCTACCATCTTTTTAGAATGTAAATAGATCAATTGT
TACTACTAACAACGTGTAATTTGCCGAATGAAAATTCGACCGGATTTGAT
AGTGAGCGCCGTATTTCGAAGGAAGCGGATCATTTCGAGATTATTCAACA
TTTTGGTTCTGGCTGCCTGGGTATCCCTCAGACAAAATCTTACATAACCT
TTCATATTTACATAAATTTTGACAAAGGATGGCTGATGAGACGGACCTTG
AAACCTACAAAGCTCAACTTGAGCAAGTAAGAATTAATCCCTCTCTGAGA
ATTTTATATGTGTCTTTTTTTATCTTTCTTTAATTTTCTTTCTTTTTTTC
TATATTATTTTCATTCAATATCATCACGACCCTGCCGGTGCACCCGACAC
TCAGGTGCTGTTTTCGGGTGTTCTAAGTTGGAAATTTAAACACCAGACAG
TTGGGTGCACTTTGTCGGGTGCTACATCTTGGGCGCTTTTAACAGCACCC
GAGCGACATGTAACAAAGTTAAGAATTTTAGCACCCGACTGTCGGGTGCG
CTATTGTCGGGTGTTTTCGCAAATTTAGAAATTTAGCACCCGACAAAACA
CCCGACAGCCCCCGACTGTCGGTTGTATCTCTTATTTTTATGGAAGCCCT
GACAGTCAATACCTTTATTTATAAATAGTCAAATTAGGAACATTTTTCTT
TTTACTTTTACCAGGATTCCTATCCTAATTAGGAATCCTTTTCCTAAGAA
GGAAGAAAAAAATTCCTAATTAGGAAGAAATATTTAAAAGTTTAATATCT
CTGAAACGAGCCACATTCGCAAATTCCAAATGATCAATAGATTTGGGCGG
TATATCGCAAATATGATACTGTAACTGTGCAAAAAATTGAAAAATTTCAT
TCGCGGATGGTGGAATAGACCTTTTTGCCTTTCCATCCGCCATATTCACT
TGTATGCAAAAATTATGGTGGCCGAATTGCCGTGGCGAAATTCCCTTAGA
AAGTATGCAAAACATATGCAAAAAGAAAGTATGAATTAAAAACTTAAATT
AAATTTGCTTCTCTTGAAAACTAAAAACAATTATATTCACTCATCTCTTA
GAACAAGCATTTCAAAAGACCATAACATTAGACAGAAACTCAAACTGAAA
AATCACTCGCAAAGGTAAAAAACAATCCTTATTCGGCTGACGGCAAATTA
TTCTCCTGGGAATAGAGCCGCCAAATGATCAAATCAAAACATTGAGAAAG
TGTGACGTCATAATTACTGCTTTCAGTTTGCGTGTTTTGAAAGTTTTATG
TGTGTACTCCGTCTTCGTGGAATTTTTTTATGGCATGAAAACAGAATATG
CAATGTCTTTACAGTAAGAACAAATTCCTAAAAGGCTTTTGTTGTTCTGT
AAATATTTCCTTTTGGATTTTATTGTTCTAATGATTATAATATTTTCTTA
TAAGATGCTTTGTTGTCTTTTTAATCTTTGTGTAAACTTGCATATGTTTT
GCATACTTTCCAACTAAATCCAACCACAGCATTTTCGTTCCTGTATTTTT
GCATACAATTCAAGATGGCGGACGGAAAGGCGAAAAGGTCTATTATTAAC
GTCCCAAAAAAAATAATTCCAAATTAGGAATTAAAGGAACTGCCGTTTTT
ATTATCACGAAGAAAAACAGAAAGTGAGTTTCCTGCGTTTTATAAATAAG
ATGTCCATTTAAGATGTCCATAGAGAACTGAAGTTTTTTCTAGGATTAAA
GCTTGGTCAGGCTTGGTCCCCTGAGTAAGTCAAGAGCTCAATCTTTCTTT
CCCACCTAAATGGAACAGTAAGAACCAGACGAAGTCAATCGAACAACTTG
GAACAAAAATCACAATCAAACCAATGGAACGTAATCAAACGCAATCGAAC
GCAATCGAATAATTGCGATTCGATTGTCGAACGTAATCAAATCTTAATCT
AGGCGGCAATCAAAAAAATGTTGTGTTCGGGTCGTCTGACCGGCTGTTTA
TTTACAAGAAAACTCGATTCGGAGATTCAGTAAAATTGTCAGATTTTTTT
TGGGTGGCAACATAATTACACCGACTTAAGGCGTCGGACATTTGAAAATT
ATTAAAAACCTGAACATATTTGGTACCGACCGACCGACTCGTTTTTATGT
CATTTTAGGACCAGAACGCAACATATTTTTGATTGCCGCCCTAACGCCCG
AATCCTGGGTAATATTCGATTGTGTTCGATTGCGTTTGAGGAAGGTTAGA
CAGTTCCATCAATATGCCAAAAACATTTTGTTCAACCACCTTCACTTCAA
GATAGGCCACCATAGAATGAACTTCCTTTTATAGGATGAACCATATTCAT
GTGGCTTTTAGCCTTGCAATATTTATAACTTCTCACAACAATATCAAAAT
TCTCACAACAATATTACAAACTTTAACAACAATATCAATACTCTCACAAC
AATATCAAAATTATGGCAACAATATCAAAACTATGGCAACAATATCAAAA
TTTTCACAACAATATCAAAATTTTCACGACAATACCAAAAGTCAGAAAAA
ATCTTAAATGCTCTCCTACAGTGATTTTTCTACGTCTTGTTGATGATGAA
AAATCTTCCTTGAGGACAAAGTCAGAGGACAAACCTCGAGGCGCCTGCAT
GTGGCCAAATATTTTATATGGCAATTGAATCCGTCATACAGTTACAATAA
ATTTACGGATATTCTGGTAGTCGTCATGGATTGCCGTGGAAAAGTCCACG
ATGGCAACTGATGCACGGAATGTAGGAGTAGACTGCACCACATTTATCTT
ATATATGTATTCGATCGTAAGTATTTTCTGATTAATCTTTAGAAGTTGGT
CCATACTGTCCATAAAGCTTATGATTATGGTTTCTCTGGAAGTCGGGAAC
CTTTGCAGCTAAACACCAAAGGCTTAATTTCTTTTCAATCGCAAGGTGAT
AACCTACTCTGGGTGTACCAGAGGCCAAGTTTTCAGAGATATTGATTCAA
GCTGCGCTACCCACGGTAGGGACAACTACGTGGAATACACACACAGGCGC
CTCCTATGTGTAATAACTTAAGGCGGAAGTTTTTTTCATCATCATCATGA
GATGTAATAAATCACTGAGGGAGGAGCACTTTAGGTTTCCCAATTCCCAT
GTTGCTTTGAGAATTTTGGTTTTGTTGTGAGAATTTTGATATTGTAGTGA
AAGTTTGTAATATTGTTGTGAGAATTAGGATATTGTTGTGAGAATTTTGA
TATTGTAGTGAAAGTTTGTAATATTGTTGTGAGAATTAGGATATTGTTGT
GAGAATTTTGATATTGTTGTGAAAGTTTGTAATATTGTTGTGAAAATTTT
GATATTGTTGTGAGGGTTTGAAATATTGTTGTGAGTGATTTATATTGTTG
TGAGAAATGTTGTTGATGTGGCCGCTCAGGGCTTCCGTAGATTTTAGCTT
TTTGAGTTTTCTTGTTTTCTAAAAGTTTACATTGAGGTTTCCCCAGCAGT
ACCAGTAACTTTGATTACGATATCACACAATGTTTTCTGAAGAAACTATT
TCCAAATCACTTTAACCAGACAGTGTCAATCGAACAACTTTGAACAAAAA
TTGCAATCAAGGTAATGGAACGCGATCGAATAATTGAACAGCTGATTCCT
GGGTAATATTATAGTAAGGTTAGATTGGTTTGATTGAAATTTGACTATGT
TCGATTAGTTCGATTAAATTGGATCACAACGTTAGGGCTTTTTAGCGTGG
ACGGCCAAGCGCTTAATAAGTACCGTACCAAAGCCGAATACCATCGAACG
AAATCAAAGCAATCAAGCAGCAAATCCTGGGTAATATTCCATTGCGTTCA
ATTGATTCAGCATTCGATTTGTTTGATTGACACCGTCTGGACATAATCAC
TCTAGAAAAAAGTCCCTATTATAAAATCACGCAAACTGCTTCGGGGGCCT
CTTGCAATGTTCAGCAGGTGATCTCAATCTGTAGAGGTGCCAACCAACTC
TCACACGTAAATTGAGGTGTGAGATCCACATTCTCTCACGTAATTTTTGA
AAAGTTTGAAATTCCCTGGAAAATTTCCCTTTTCCTAATATTCTGCATTT
TGGAATTATCTGATTGAAGTTCCACTTTCAATTACGCAATATAATCTCAA
TCGAACACGGAATTCTACCGGGTGACCCACGAAAAAGTTCAGACGTTTCC
CGGCGTCTAGAGGCCGAACAAATGTCCCAAAGTGCTTGGAGTTTTGATAT
TTAGAAAGTAGATATCCTAACTTAAAATTTGAGCCATCACTTTTTAAATT
CGACCAACTTGCTCTCTACTTATGAGCTTTTAAAGTGGGTCACCTGGTAG
GTATCAATTGATTTGATTGAGATTGTTGCATTTGATTGAGATTCAATCAG
ATTTGATGTTCCTGACGTCATTTGTATTTCATTTCTGCCAATGAAGTTTC
ATACCCATTGATTATTTTTTTTATGCTAGCTGGTTTGCTAGCTAGGCTGT
AAAATAATTGGCATAAGGCCAAAATTTACAGGTATAATATACCGTAAGTT
GGTCATTTCTAACCACAAAATGATATCCATAGCACCCTTATTATATAATA
TCAACAGTATGAACTTTGAGATGATTTGTTTCAAAGTTATCAGCAAAATG
AAACCTTTAAACTTGAAAAATGGATTTATAAGTTTGTCTTGCACATTGGA
TACAGGAATTTCCAAATGAATCATTTTCAAAATATCAGTCCCTTTTGCAG
GAATTAAAAAAGCCAAAAAAATCTAGACAAAGAGGGTGGGGGTAAATAAT
TGAACAGCAAACCATTAAGTAAGACTTTTAGTGCTCAAAATACAAAAATT
ATATAAATTAATCTCATAGCAAAGAAGTGCCAGAATTTCTGATAAGAATC
GGGCCTTTGCAGCAAATCAAAGCAACCAGCGGCCTTGGTTATACATCTGC
CATTTGATGTTTTTTATTTGGGGACATCATATTTTAGGGAAGGGGGCCTT
TCTTTAAAGTTTTTATATATAACATAAGATTTTCTATGCAAATTTTTTTT
GGCTTTTCATTAAGTTGCCGTTATTGATTTTGTTTCCTAAATTTTTATCT
GGTCTCACTTAACGACTCTTTTACACTCTTTTCTAGGTTGAAGCTGCATT
ACTGATTGATGAAAATAATGAAGACCTTCTGAAATTAAAACAAGATCTAC
TGGTAAGCTAAAAAAATTCAGTCAATGCTCTCACAATTAAAATCTTAGTT
GTCCATTACTAACAATACGATTTCTGTATAAACAAAGTTGAAAAAAAAAC
TCAAGATCAAAGTGCTGTGGGAATTGGTGGTACATTTTTGACCAAATAGT
CATATTTTAAATCCAAGGCAGAGACTTTCAATTTTTAGTTGATTTGTTTT
AATAAAAGTTCTTTTTGTAATTTCACTTTAATTATTATTTAAATGTTTAT
TCTCATCTATTTCAGGAAGTGATCTCTTTGTCAGAAGAATTGGAAGAGAT
TAATGAGGTTTTTAAAATTATATTTATTTTGCTGTAAATGTTTTTATCTT
TCCTCCTGTGCTTGATAATATCAAAGTCTATAAGTCTATACTTTGTGAAC
ATAATTTTTCAAAATTTTGCTTTGTAATTTTGAACCTTTTTGCAAAGGTT
GTCTTGAAAATGCTCATGGTCCTATTCTAGAAAATTTATGCTTTTCTATT
TTTTATAGAATTCAACCCCTAGATGGTACTACCTCTCTAATGAAAAATAT
TTTGATGTTTTTTTTTTGCTATCGCACCCTGTTGTATAGTAATGTTGTTT
TCATATAGAATTTTCTTTGAAATTAGATACCAGAAGGTACAAGCTATGAA
GAACCAAAGAAAGAAGAAAAGCATAAATGGAAGCAGGGTGATCGTGTTCA
AGCTGAAAGAAAAGCTGATGGAAAGTAAGTCCCTCTATCCATCAATTTTT
TTCATTTCATTTATCAATTTGCCATCACTGTTATGTTGTTGAATTCAATT
GGAAAATTATAGTAGGTTTTTTCTACATTTAGAAAATTTTTGCCAATTAA
TACACACTTCTTGAAGTGCATAAAATCCTTGAGCTTTATTTTTAAGATAT
TGTCACCAAGATTCTATTATATTATTAAAAAATTAAATCAAAAAATACTT
CTTGCTATCGTATCAAAATTGATAACCATGTATTGGCTATACATATTTAG
TTTTTAAAAGTTGTTTGGCTGCAATGATTTTGTAATGCCTGCCTTGGTTG
TCTTTCCATTTGTTTAGTTACAAATTTTTTTTCTAATAAAACAGGGCTTG
ATTAATTGGAAAAAGTACACATTGTATTTTTCATTATTGACCCTTATCCT
GAAGAATAGTTCTTTCTTTTATGGATTTCACGAGATCTTTTGGATTTATT
TCAGGCCGAGTTGCGATTTAAAATGTCTTCTATTGTCCATTGTTTAATTG
ATGTAAGTATCCAGAAATATCTCAGTCCCTTCTTCCAGCAGGATTGTGTT
CATTGTTATAAGTTCTTACAAAAGCACAAAAACAAATATTTCCTTCTTGA
GATTCACCAATTTTCAAATTTCTTGTGTAAGGAAAACTTTGCTTTAATCA
CACTGAATGATTTGACATTAAAGGAGTTGACTTTTAAGACACTTTGGCTC
ATAACCACCTTATTCTCTTTAAATATATTTTTAATTATGAAATTTAGGCT
GGAGGATGCCTTGCCTTTTTAAAAGCTCTTTTTATTCACTGACGTGTAAA
AAAACAAAATATCTCCTGGCCAAATTTTGAAATAAATTCATCTCGAATGA
CTTTCTATATGTATCTATCATTACGCTTTTCTTCCAGGGTGCACAATGCG
AAGATTGAAATGATTGCTGATGATGGATTAACATGTGTTGTTAAATTTGA
TAATATCGGTGCCGTTGAAGTTGTCCAGGTCGGTTTGAAATCTCATCTCA
TGATATCCTCATAATTAGAAATCACTTAGATACTCTTTACTATTAAAACA
AGGGTTTTATTTTATGTTGCAGTCGCCTGGCTTTTTATTTCACCACTGTC
CAGTCCTATCAGATTACTTACATAATCGATTGGTAACTATCATTCTCTTG
ATCATCACCCCAGGAATTCTTTCTGCTCTACAATATGTATATTAGGACAA
TATGCACATTCTATGAGGACTGGAAGTGGTGTCTTTTAATGTGATGTAAG
ATCCAGTTTTTCACCTTTTTCTTTTCCACTATAGATCACAGGTCTACAGG
CAGCAACTGAATCAACGGAACCTTCGCAAGAAGCATCTTCATCAACAACC
AACCCTCAAGGTCAACAAAATAATACACAAAAACAAGGAAAACTTACAAG
GTTTGATGAAATTATTATAGCTGGTTCACAATCAACCCTTTCTACTTTTT
TTCAAATATCGATTGAAGTTATAAATATATTCCTGCATTTGACGTTTCAA
GTCAATGTTTGCTCCCTCAAGTGATGCACAGGGCCCTACTTAGGCTATCC
TCTACTTGAAAATGAGTTGACGGTCTTACACAGCTTCATGAATAACGTAA
TGATTTAGCCTGGTGCAGAATAAATCATAGTAGATGTGACAACCAAACAC
AACAAAATATTACCAACATTTTTCTATAGGGAAGAATTAGAAAGGCGAAA
GGAAATTAAGAAAAAGAAATTATTGAAGAAAAAGCAAAGGATGAAGGTAC
AAATTTTCAATCTTTAGTAAAGTTTTCAGTAGTGTATTCTATTGAAACTT
CATCCTATAATGATATCCTGTTCCCATTTGGCTGACATTTATGAGGAGCT
GCATCGTGGGTCACGTTGGCTTTAGCCAGAATACCTTTTTTTCAAAGTAA
AACATTGTATACAGTTTATACAGTAGTACTACTGTAGTTAAAGGGGCATT
AAATAAATTAGTAAAATGTAAACATTGCGCGAACCACGTGTCATTAAAGA
GAATAATTAAAACTTGTCCAAAACAAAACAATTGAACAATCAAAATTAGC
CACATTTGGTTTTATTTTTTATCCGCTGCATACAGTTTGTTTACAAATTT
CGTAAGTACTGTTATGTCCCTTTAAGTAATTTTGCTTTAAAATCCTGAAA
ATTCTTGATAGGCAATATAAACGGTCTAAAACTTGAAAAAATTTACCGTG
GTGGTACTACCTTAGTTAATCAAGTAATATTATTTTTCGCTTACGCTTTT
CTTTTCAAAGGATTTCGAGGAGAAACGTGAATCAGAGAAGAACAGATGGC
AATCCTTCTTCAAGAAAGGAACTTCAGGGAAAGGCAAAGGCAAAGTCAAG
GGGTTGAACAAAAAAAGTATATTTGCATCACGTGAAGATGGCAAAGGAAA
GGTCAGGCAATTCTTTTTCATGATTTATTTAGATTCTTATCTACATCAAA
GATAACTAACTAGTATATGCTTTCAGGTAGCTTTTAAAAACTCTTAGTAA
GTCTGCGACCTCAGTCGGAGGCGACCTGAAGGCTCCTTTTTCGATAGCTA
TCTACCCGAAGTTAGGGGAGGGCGCCACTCTTTCTCCCTAGATTGCTCCA
CTTATCCTTGATCCTTCTGTTGATTGCTGAGCATCAAGCAGAGAGGCATC
AAGTACCATTTTTGGGAATCTATGGTATGACCCGGCTGGGGGGTTGAACC
TACAACCTTGCGAACCGTAGTCGGATGTTCTACCACTGCACTACGCTTAA
AGACTCTTAACTGTGTTCACTGTTGCCAGAGTGCTCTATCTGTAATGAAA
CAAATGAACCTTCATCTGCATTTCGTCCCTAACCACTGTCAGAGGGTGAA
AGAGGGCAAGGTTTCATGTATTTGCTGGGATATTTGTAATAATTAGAAAT
ACTTTTTGTTATAGATTGGCGTTGGGACATGTGGTACATCTGGTAAACAA
ATGACATCCTATACACCAGCCTCACAATACATGTACAAGAAATAGAGGAA
TCACAGTCTAGTCTGTAACTAAGGGTCTACTTAAATTGTCGAAATGTAAA
GTAGGGATTTCTTCCATTCAAATCTTTATGGTCAATTAAGTACAACACCA
GTTGCTTGTGGATATACATAATGTAAAAATGGTTTGTGATTGTGGAGATA
CAAAGGCTTGAGAAATTTGGAATTTTCAGAGCTTTGTCATTGTGCTTGGG
ACACTTGTGTACAAAAAGCATTGTTAAAAAACCGAGACGATGTGAAAATC
TTGATTTATAGATTTATAGATTATTTGCACATTATGACCAATTACATAAT
CCCAGAACGGGGACATAAGGTTTTTTCTCAAATGCTAAATAACCAGAAAG
AGAAATTTTTCATCTATTTTCCAAGTTTTTATTGGTTTTTAATAAAGTCA
ATTACCATCGAAAAAAGGTCTTAAGTCCTCTAGAATTTTGAAATTACTGT
ACTTATGTATATGGGATTTTGAATTTTTATAAGCAAACCTTTGTAAATCA
GACATATTCAGATTCAAAAAGGAAGATTTTGTACCAGATTTAACTACGGT
TTATTATATAGCAACAGTATTTTATTATGATCTGGATTTTCAGGTAGTAT
AATTTCGAGTCATACAATATGCACACACTCCTTTTATTCATTCATTCACT
CCAGTGACCTTCCCTTTTCCCAAAGGTAATTTCTAGACGACTGC

Coding sequence (CDS) from alignment at scaffold_161:208825..218468-

>TCONS_00049608 ID=TCONS_00049608|Name=TCONS_00049608|organism=Clytia hemisphaerica|type=CDS|length=2988bp|location=Sequence derived from alignment at scaffold_161:208825..218468- (Clytia hemisphaerica)
ATTGGCGTTGGGACATGTGGTACATCTGGTAAACAAATGACATCCTATAC
ACCAGCCTCACAATACATGTACAAGAAATAGGATTTCGAGGAGAAACGTG
AATCAGAGAAGAACAGATGGCAATCCTTCTTCAAGAAAGGAACTTCAGGG
AAAGGCAAAGGCAAAGTCAAGGGGTTGAACAAAAAAAGTATATTTGCATC
ACGTGAAGATGGCAAAGGAAAGGGAAGAATTAGAAAGGCGAAAGGAAATT
AAGAAAAAGAAATTATTGAAGAAAAAGCAAAGGATGAAGATCACAGGTCT
ACAGGCAGCAACTGAATCAACGGAACCTTCGCAAGAAGCATCTTCATCAA
CAACCAACCCTCAAGGTCAACAAAATAATACACAAAAACAAGGAAAACTT
ACAAGGGTGCACAATGCGAAGATTGAAATGATTGCTGATGATGGATTAAC
ATGTGTTGTTAAATTTGATAATATCGGTGCCGTTGAAGTTGTCCAGATAT
TGGCGTTGGGACATGTGGTACATCTGGTAAACAAATGACATCCTATACAC
CAGCCTCACAATACATGTACAAGAAATAGGATTTCGAGGAGAAACGTGAA
TCAGAGAAGAACAGATGGCAATCCTTCTTCAAGAAAGGAACTTCAGGGAA
AGGCAAAGGCAAAGTCAAGGGGTTGAACAAAAAAAGTATATTTGCATCAC
GTGAAGATGGCAAAGGAAAGGGAAGAATTAGAAAGGCGAAAGGAAATTAA
GAAAAAGAAATTATTGAAGAAAAAGCAAAGGATGAAGATCACAGGTCTAC
AGGCAGCAACTGAATCAACGGAACCTTCGCAAGAAGCATCTTCATCAACA
ACCAACCCTCAAGGTCAACAAAATAATACACAAAAACAAGGAAAACTTAC
AAGGGTGCACAATGCGAAGATTGAAATGATTGCTGATGATGGATTAACAT
GTGTTGTTAAATTTGATAATATCGGTGCCGTTGAAGTTGTCCAGATATTG
GCGTTGGGACATGTGGTACATCTGGTAAACAAATGACATCCTATACACCA
GCCTCACAATACATGTACAAGAAATAGGATTTCGAGGAGAAACGTGAATC
AGAGAAGAACAGATGGCAATCCTTCTTCAAGAAAGGAACTTCAGGGAAAG
GCAAAGGCAAAGTCAAGGGGTTGAACAAAAAAAGTATATTTGCATCACGT
GAAGATGGCAAAGGAAAGGGAAGAATTAGAAAGGCGAAAGGAAATTAAGA
AAAAGAAATTATTGAAGAAAAAGCAAAGGATGAAGATCACAGGTCTACAG
GCAGCAACTGAATCAACGGAACCTTCGCAAGAAGCATCTTCATCAACAAC
CAACCCTCAAGGTCAACAAAATAATACACAAAAACAAGGAAAACTTACAA
GGGTGCACAATGCGAAGATTGAAATGATTGCTGATGATGGATTAACATGT
GTTGTTAAATTTGATAATATCGGTGCCGTTGAAGTTGTCCAGATATTGGC
GTTGGGACATGTGGTACATCTGGTAAACAAATGACATCCTATACACCAGC
CTCACAATACATGTACAAGAAATAGGATTTCGAGGAGAAACGTGAATCAG
AGAAGAACAGATGGCAATCCTTCTTCAAGAAAGGAACTTCAGGGAAAGGC
AAAGGCAAAGTCAAGGGGTTGAACAAAAAAAGTATATTTGCATCACGTGA
AGATGGCAAAGGAAAGGGAAGAATTAGAAAGGCGAAAGGAAATTAAGAAA
AAGAAATTATTGAAGAAAAAGCAAAGGATGAAGATCACAGGTCTACAGGC
AGCAACTGAATCAACGGAACCTTCGCAAGAAGCATCTTCATCAACAACCA
ACCCTCAAGGTCAACAAAATAATACACAAAAACAAGGAAAACTTACAAGG
GTGCACAATGCGAAGATTGAAATGATTGCTGATGATGGATTAACATGTGT
TGTTAAATTTGATAATATCGGTGCCGTTGAAGTTGTCCAGATATTGGCGT
TGGGACATGTGGTACATCTGGTAAACAAATGACATCCTATACACCAGCCT
CACAATACATGTACAAGAAATAGGATTTCGAGGAGAAACGTGAATCAGAG
AAGAACAGATGGCAATCCTTCTTCAAGAAAGGAACTTCAGGGAAAGGCAA
AGGCAAAGTCAAGGGGTTGAACAAAAAAAGTATATTTGCATCACGTGAAG
ATGGCAAAGGAAAGGGAAGAATTAGAAAGGCGAAAGGAAATTAAGAAAAA
GAAATTATTGAAGAAAAAGCAAAGGATGAAGATCACAGGTCTACAGGCAG
CAACTGAATCAACGGAACCTTCGCAAGAAGCATCTTCATCAACAACCAAC
CCTCAAGGTCAACAAAATAATACACAAAAACAAGGAAAACTTACAAGGGT
GCACAATGCGAAGATTGAAATGATTGCTGATGATGGATTAACATGTGTTG
TTAAATTTGATAATATCGGTGCCGTTGAAGTTGTCCAGATATTGGCGTTG
GGACATGTGGTACATCTGGTAAACAAATGACATCCTATACACCAGCCTCA
CAATACATGTACAAGAAATAGGATTTCGAGGAGAAACGTGAATCAGAGAA
GAACAGATGGCAATCCTTCTTCAAGAAAGGAACTTCAGGGAAAGGCAAAG
GCAAAGTCAAGGGGTTGAACAAAAAAAGTATATTTGCATCACGTGAAGAT
GGCAAAGGAAAGGGAAGAATTAGAAAGGCGAAAGGAAATTAAGAAAAAGA
AATTATTGAAGAAAAAGCAAAGGATGAAGATCACAGGTCTACAGGCAGCA
ACTGAATCAACGGAACCTTCGCAAGAAGCATCTTCATCAACAACCAACCC
TCAAGGTCAACAAAATAATACACAAAAACAAGGAAAACTTACAAGGGTGC
ACAATGCGAAGATTGAAATGATTGCTGATGATGGATTAACATGTGTTGTT
AAATTTGATAATATCGGTGCCGTTGAAGTTGTCCAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031451XLOC_031451Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049608-proteinTCONS_00049608-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049608-exon-scaffold_161-1575043694:218193..218468TCONS_00049608-exon-scaffold_161-1575043694:218193..218468Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1575043694:213267..213332TCONS_00049608-exon-scaffold_161-1575043694:213267..213332Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1575043694:212962..213003TCONS_00049608-exon-scaffold_161-1575043694:212962..213003Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1575043694:212545..212642TCONS_00049608-exon-scaffold_161-1575043694:212545..212642Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1575043694:212017..212064TCONS_00049608-exon-scaffold_161-1575043694:212017..212064Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1575043694:211541..211631TCONS_00049608-exon-scaffold_161-1575043694:211541..211631Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1575043694:211119..211234TCONS_00049608-exon-scaffold_161-1575043694:211119..211234Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1575043694:210773..210839TCONS_00049608-exon-scaffold_161-1575043694:210773..210839Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1575043694:210118..210258TCONS_00049608-exon-scaffold_161-1575043694:210118..210258Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1575043694:208825..209604TCONS_00049608-exon-scaffold_161-1575043694:208825..209604Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1510915933:218193..218468TCONS_00049608-exon-scaffold_161-1510915933:218193..218468Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1510915933:213267..213332TCONS_00049608-exon-scaffold_161-1510915933:213267..213332Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1510915933:212962..213003TCONS_00049608-exon-scaffold_161-1510915933:212962..213003Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1510915933:212545..212642TCONS_00049608-exon-scaffold_161-1510915933:212545..212642Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1510915933:212017..212064TCONS_00049608-exon-scaffold_161-1510915933:212017..212064Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1510915933:211541..211631TCONS_00049608-exon-scaffold_161-1510915933:211541..211631Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1510915933:211119..211234TCONS_00049608-exon-scaffold_161-1510915933:211119..211234Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1510915933:210773..210839TCONS_00049608-exon-scaffold_161-1510915933:210773..210839Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1510915933:210118..210258TCONS_00049608-exon-scaffold_161-1510915933:210118..210258Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1510915933:208825..209604TCONS_00049608-exon-scaffold_161-1510915933:208825..209604Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1491911889:218193..218468TCONS_00049608-exon-scaffold_161-1491911889:218193..218468Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1491911889:213267..213332TCONS_00049608-exon-scaffold_161-1491911889:213267..213332Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1491911889:212962..213003TCONS_00049608-exon-scaffold_161-1491911889:212962..213003Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1491911889:212545..212642TCONS_00049608-exon-scaffold_161-1491911889:212545..212642Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1491911889:212017..212064TCONS_00049608-exon-scaffold_161-1491911889:212017..212064Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1491911889:211541..211631TCONS_00049608-exon-scaffold_161-1491911889:211541..211631Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1491911889:211119..211234TCONS_00049608-exon-scaffold_161-1491911889:211119..211234Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1491911889:210773..210839TCONS_00049608-exon-scaffold_161-1491911889:210773..210839Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1491911889:210118..210258TCONS_00049608-exon-scaffold_161-1491911889:210118..210258Clytia hemisphaericaexon
TCONS_00049608-exon-scaffold_161-1491911889:208825..209604TCONS_00049608-exon-scaffold_161-1491911889:208825..209604Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_161supercontigscaffold_161:208825..218468 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
40.7052	41.0532	23.1536	25.5193	26.6928	23.0951	27.0137	27.8595	13.5946	10.7126	16.9532	16.026	14.7781	16.2666	15.4818	16.3731	14.5559	16.1109	7.71125	7.45241	29.2759	21.6519	30.1321	27.8989	26.965	21.5641	25.3467	21.4258	18.365	21.2096
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049608 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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