TCONS_00049485 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049485
Unique NameTCONS_00049485
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2150

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049485 ID=TCONS_00049485|Name=TCONS_00049485|organism=Clytia hemisphaerica|type=transcript|length=2150bp
ACTGGGCGAACAATGAAAATCGGGGAAAGTAAACCGGTCTCAAATAATCC
TTCCAATCATTTACCCATGATTCCACAGGCTAATGTTCAAAAATATAGCC
CTAGACCTGCACGTAAAGCATCGCAAAGTTCCTACGTGCCGACTATTTCA
AATAAACAACCGCGACCACCGAGTCAAGAGAAGAAACAACGACCCGTTGC
CGgtaaaatgatggaatcgaaCTTAAGAAAGTTTTCAGCAGCAAACCGAC
CTCGTTTTGTACCTGATCAACATTTCAAATCACCACCCCAAATCAAACAC
CCTGTGCTCAACACTCGGCCCTCAGACCAACGCCCTTCTTCACCAGGAAA
TCAGCAAAACCATTTGAATGTACATTTGACGCTNCTCCAATCATAATAGA
GCAAACCGAAACTGGGCGAACAATGAAAATCGGGGAAAGTAAACCGGTCT
CAAATAATCCTTCCAATCATTTACCCATGATTCCACAGGCTAATGTTCAA
AAATATAGCCCTAGACCTGCACGTAAAGCATCGCAAAGTTCCTACGTGCC
GACTATTTCAAATAAACAACCGCGACCACCGAGTCAAGAGAAGAAACAAC
GACCCGTTGCCGgtaaaatgatggaatcgaaCTTAAGAAAGTTTTCAGCA
GCAAACCGACCTCGTTTTGTACCTGATCAACATTTCAAATCACCACCCCA
AATCAAACACCCTGTGCTCAACACTCGGCCCTCAGACCAACGCCCTTCTT
CACCAGGAAATCAGCAAAACCATTTGAATGTACATTTGACGCTTGCATCT
CAACGCCCCACATCGCCCGGTCCTAAGGGTGCTGGGGTTGGCGAAGAAAA
GAAAGTTCGAAGAATTTCCCTAATTAAGAGTCCAAGACCGTTATCACCAA
ACCCACATGGAATGAGTGCAGTGGGAGCAATAGCTGAGCAGCCGGAAGAT
GAAGAAAAACCAGTTGTCATAGAGATAGAAGAAGAACGTATCAACAAACC
TTGGAATAACTGGATCAAAGCTGTCACTGTAGAAGCAGACACAGACGTGG
AAAGTGGTGGAGAACGCCCAATGACGCCCGATCCAGAGGGTGGTTCATCA
AACAGTACACTTCAAGTACAACAACAGGGTAACGCTAGAAAGAAATCATT
CGATCGATGGGTACAAGAGAAAGCACAGGaggaacaagaaaaagaattac
aaaagaTGAGAGAAGCTTATGAAAAAGAAAGAGAGGAGGAAGAGAAGAAG
GCATCACATCACGGCAAGAGTTTTGACGATTGGATGCGTGAAAAAGAAGA
TCGCGCTcgacaagaaaaagaaaaacatgaacaagaacaaaaagaaaagg
aaagaaaagaagCTGAAGAAAAGGCTAAACAACAAGGTAAATCATTCGAG
AAATGGGTGAAAGAGAAGGCAGAGTATGACCGTCTATTGAAACAACAACA
TGAACAAGACgctaaagaaaatcaaaagcaaCAGAAGACGTTGAAAGGGA
AAACTTTTGAAGATTGGCAAAAAGAAATGGAAGTAAAACGAAAGCAGGAT
attgaagaaaagaaaacgAAAGAGACCAAGgaaaaggAAAAGCAAGAAGA
AGCAAAAGTACGGCGCCGAAAAGAATCATCGGCAAAATTCCAACAATGGT
TACTGGATAAAGAGAAATTAGCTTTGGAAAAAGAAATGCAAGAATTGAAG
AAACGAAAAGTATCGACCGCTAAAAATGCTACACGTAAAGCAAGTACAAT
GAAAAAGCCTGCTCCGAAATAATAACATTGTGTCTTCAtcaaagagaaaa
ttttgatttcataggAATCCACTGAAACATGTAGAACCTTGACTGCTAAT
CTGCTTAATCGATCAACGGCTAAGTCAAAGTAAGGTATTGAACCATACAG
GTTTTACTGTAAATAAATATTACTGATTTTAAGAATTCGATTCCTTCATT
ATCAACTACTGTTTGTTACCTTCTGGTGTCATGGTAGCACCTAATTCCCT
AAACTGGTACGGTGAAAATGTAGAGCTTTTCAGTTTGTGACGATTTTTTC
CAATAGCAAATATCGATGCACCAAAAGGAAGAAAATCATTTCATAAGCTA
AATTTATTCTGCTTTATGCAGTGGCCAAAGCGAAGTTCTTTTTGTCTCAG
Run BLAST on NCBI

protein sequence of TCONS_00049485-protein

>TCONS_00049485-protein ID=TCONS_00049485-protein|Name=TCONS_00049485-protein|organism=Clytia hemisphaerica|type=polypeptide|length=449bp
MKIGESKPVSNNPSNHLPMIPQANVQKYSPRPARKASQSSYVPTISNKQP
RPPSQEKKQRPVAGKMMESNLRKFSAANRPRFVPDQHFKSPPQIKHPVLN
TRPSDQRPSSPGNQQNHLNVHLTLASQRPTSPGPKGAGVGEEKKVRRISL
IKSPRPLSPNPHGMSAVGAIAEQPEDEEKPVVIEIEEERINKPWNNWIKA
VTVEADTDVESGGERPMTPDPEGGSSNSTLQVQQQGNARKKSFDRWVQEK
AQEEQEKELQKMREAYEKEREEEEKKASHHGKSFDDWMREKEDRARQEKE
KHEQEQKEKERKEAEEKAKQQGKSFEKWVKEKAEYDRLLKQQHEQDAKEN
QKQQKTLKGKTFEDWQKEMEVKRKQDIEEKKTKETKEKEKQEEAKVRRRK
ESSAKFQQWLLDKEKLALEKEMQELKKRKVSTAKNATRKASTMKKPAPK
Run BLAST on NCBI

transcript from alignment at scaffold_16:254830..262191+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049485 ID=TCONS_00049485|Name=TCONS_00049485|organism=Clytia hemisphaerica|type=transcript|length=7362bp|location=Sequence derived from alignment at scaffold_16:254830..262191+ (Clytia hemisphaerica)
ACTGGGCGAACAATGAAAATCGGGGAAAGTAAACCGGTCTCAAATAATCC
TTCCAATCATTTACCCATGATTCCACAGGCTAATGTTCAAAAATATAGCC
CTAGACCTGCACGTAAAGCATCGCAAAGTTCCTACGTGCCGACTATTTCA
AATAAACAACCGCGACCACCGAGTCAAGAGAAGAAACAACGACCCGTTGC
CGgtaaaatgatggaatcgaaCTTAAGAAAGTTTTCAGCAGCAAAGTAAG
ATATATGATATGAAACAATGGTTTCAATGGGGTTGGATCACTGATTTCTA
GCTGCTTGACTGGATTGAGCTTTCCATATAAGGAAGCGTATTCAGTTTTA
GAGCTGACTAGTCCatcatcttgttttcaattctggttGTCACAGCGAGA
TTCGAACGAAGGTCCACTTAGAAAACAACATGGTTGACTAGTCAACTTCA
AAACTGGAAACACTTCCATGGGAAATCTTCGAGCAGTAAGCCTATCTAGG
GTATAAAATAATGTGATGTCTATGATTTGGAAAGGCTTTGTCATTACTAG
CACCTTAGAaacaaaaactgacaaaaacgTTACCGAGAGGTGAATTCTAG
CTTTGGACAGTCTCCTGTGAAGACCACATTCagcgattttctgaaaattt
ggtTTTAAAGACACACAAAGAGCCTTTTTAATCATCATATTAATCTACGA
TTGATTATTATGCCTCCGTCAAATGCGATCTTTGAGAACCCTTGCTTGGG
TACCAGTTAGGCTTTAATTTGTCGAAgttcaaaaaaattctcttgGATGT
TTGTAACCTATAATCTTATATTATACATCTTTTATACTTTACCTTTTAGC
CGACCTCGTTTTGTACCTGATCAACATTTCAAATCACCACCCCAAATCAA
ACACCCTGTGCTCAACACTCGGCCCTCAGACCAACGCCCTTCTTCACCAG
GAAATCAGCAAAACCATTTGAATGTACATTTGACGCTNCTCCAATCATAA
TAGAGCAAACCGAAACTGGGCGAACAATGAAAATCGGGGAAAGTAAACCG
GTCTCAAATAATCCTTCCAATCATTTACCCATGATTCCACAGGCTAATGT
TCAAAAATATAGCCCTAGACCTGCACGTAAAGCATCGCAAAGTTCCTACG
TGCCGACTATTTCAAATAAACAACCGCGACCACCGAGTCAAGAGAAGAAA
CAACGACCCGTTGCCGgtaaaatgatggaatcgaaCTTAAGAAAGTTTTC
AGCAGCAAAGTAAGATATATGATACGAAACAATGGTTTCAATGGGGTTGA
ATCACTGATTTCTAGCTGCTTGACTGGATTGAGCTTTCCATATAAGGAAG
CGTATTCAGTTTTAGAGCTGACTAGTCTatcatcttgttttcaattctgg
ttGTCACAGCGAGATTCGAACGAAGGTCCACTTAGAAAACAACATGGTTG
ACTAGTCAACTTCAAAACTGGAAACACTTCCATGGGAAATCTTCGAGCAG
TAAGCCTATCTAGGGTATAAAATAATGTGATGTCTATGATTTGGAAAGGC
TTTGTCATTACTAGCACCTTAGAaacaaaaactgacaaaaacgTTACCGA
GAGGTGAATTCTAGCTTTGGACAGTCTCCTGTGAAGACCACATTCagcga
ttttctgaaaatttggtTTTAAAGACACACAAAGAGCCTTTTTAATCATC
ATATTAATCTACGATTGATTATTATGCCTCCGTCAAATGCGATCTTTGAG
AACCCTTGCTTGGGTACCAGTTAGGCTTTAATTTGTCGAAgttcaaaaaa
attctcttgGATGTTTGTAACCTATAATCTTATATTATACATCTTTTATA
CTTTACCTTTTAGCCGACCTCGTTTTGTACCTGATCAACATTTCAAATCA
CCACCCCAAATCAAACACCCTGTGCTCAACACTCGGCCCTCAGACCAACG
CCCTTCTTCACCAGGAAATCAGCAAAACCATTTGAATGTACATTTGACGC
TTGCATCTCAACGCCCCACATCGCCCGGTCCTAAGGGTGCTGGGGTTGGC
GAAGAAAAGAAAGTTCGAAGAATTTCCCTAATTAAGAGTCCAAGACCGTT
ATCACCAAAGTGAgtacaaaataaatattttcattaattaCGGAAAATAG
GGAATTGGCTTTGGATCGAGAGAGCTAATTAATTTAAAACGTAGATGCAA
TAGTTCAGAAATTCTCTGAGATGAAAAAACTTTCGAGAATTTGTGGGTGC
TTTTTTGCCTcgaattcaaaaaatatattttttgcatATCTACCTCGATA
GCCCACATGGAATGAGTGCAGTGGGAGCAATAGCTGAGCAGCCGGAAGAT
GAAGAAAAACCAGTTGTCATAGAGATAGAAGAAGAACGTATCAACAAACC
TTGGAATAACTGGATCAAAGCTGTCACTGTAGAAGCAGACACAGACGTGG
AAAGTGGTTAGTAAAACCTTTAGTACACAAAATACTGTTATTTGGAATCA
CGATAAATGAAGAAACTAAACATTTAATATAGAAGAGGCTTCTTTTAGGC
CTTTACAACCAAACATAATTTGGCGAGAAACTAATCGGAAAAAAATACTT
GATCTTTTGACAAATCCTTTTAACTCATTCTCTTCAGAGCCTCTTAATCC
TACTTCTTAACCTTAATTACGAATCAATCCTATCCTGGAGATTTCAATGG
CTTTCAGGGTCCATTGGCTCCCCTTTTTCTGTTCCGGGGATTAAAGGCTT
TAAAATGCAGTTAAAAAAGAGGACTTGCTTTAAAATGGTCTGCGAATTAG
TAGATAACTGGGTTAATGACATTGGGCGTTTGTGGTTTTCTGAAAAATNG
CGAATTAGTAGATAACTGGGTTAATGACATTGGGCGTTTGTGGTTTTATG
AAAAACACCATTTCCTTTTCAAGGTGGAGAACGCCCAATGACGCCCGATC
CAGAGGGTGGTTCATCAAACAGTACACTTCAAGTACAACAACAGGGTAAC
GCTAGAAAGAAATCATTCGATCGATGGGTACAAGAGAAAGCACAGGagga
acaagaaaaagaattacaaaagaTGAGAGAAGCTTATGAAAAAGAAAGAG
AGGAGGTATGGGAACTTTCTATTTTCTCAATTAGCACCCCTTTACTCACC
ATCAACCTCGCTCCCTGTGTATTATCGACTTTTTTATGCttaccatggcg
ttctaaatctacaaAACTTCTCGCTGCgttagttttttttcatttttttc
actccgtttcaatgcaacgacttcgaaATTTGAAACCCCACAAAATTGAC
GTTGCTGCACGCTTACTAGGTTTGTAGATTTGAAACGCCATGAtgtttac
tgatagcgctagataatacccttgTATTGTCTGCTTTCAGAATGctaaag
attacgtaattcgaTAACAAAatgtcagatttcatttgttccttGATTTA
AAACCTTTACGCACGTCACGTAAGAATTATGAAGTATTGctttgagaagt
tccccctctcagaggaGGAACTCTTACATCAGCCTTCTCTGTTGTTTAta
cagtaacgtaaataaagcctgggatacacggggaccaTATTGAGATCACC
TGCACCAAATGTTTTCATCAAATAGATGCCGaactttaaaattcaaaaat
atgatCTAAAAAAAGCATGGCGCGGTAATTAGCTTGAGGAAACATAGTAT
TAAAACTCCGGACACAGGCAAAGGCATCATTTCTAATAATATCAAAAAAC
GAGGCATTTGAGGCTGAAACTTCCTGAACTAAAGTCATATTCCATGGGAT
CTCTCACCTAAATTTATCCCCAATGGAAAAACCACATGATGCATTAAATT
GAAACCTTTTATTGAGAAGTTTATTGGAAACACTTGCATTTAATAATTAT
TTAAATTCAATACAATGTAACTATATCATACCACATACAGGAAGAGAAGA
AGGCATCACATCACGGCAAGAGTTTTGACGATTGGATGCGTGAAAAAGAA
GATCGCGCTcgacaagaaaaagaaaaacatgaacaagaacaaaaagaaaa
ggaaagaaaagaagCTGAAGAAAAGGCTAAACAACAAGGTTGGTGGCTGT
CTGTAGACCTCTGTTTATAGCCTACTTGCAAGGTTTTGTGGCTGCCTGTA
GACCATTGTTTGTAGCCTACTCGTATAGGTTTAGTGAATGTCTGTAGAAC
TTTGTTTGTAACCTACTTGCATAGGTTTTGTGGCTGCCTGTAGACCTTTG
TTTGTAGCCTACTCGTATAAGTTTAGTGCTGCCTGTAGACCTTTGTTTCT
AGCCTACTTACAAGGTTTTGTGGCTGCCTGTAGACCATTGTCTGTAGCCT
ACTCGTAAAGGTTTAGTGAATGTCTGTAGACATTTGTTTATAACCTACTT
GCATAGGTTTTGTGGCTGCATGTAGACATTTGTTTATAGCCTACTTGTAA
AGGTTTGCAAGACTATGTCAGGTAGGTTAGATATTACAACAGTTATGAAC
TGTGATGTTTTAAGAAAATACTTAGTCAAGGGTAAATTTNATGATCTAAA
AAAAGCATGGCGCGGTAATTAGCTTGAGGAAACATAGTATTAAAACTCCG
GACACAGGCAAAGGCATCATTTCTAATAATATCAAAGAGAGAGGCATCTG
AGGCTGAAACTTCCTGAACTAAAGTCATATTCCATGGGATCTCTCACCTA
AATTTATCCCCAATGGAAAAACCACATGATGCATTAAATTGAAGCCTTTT
AGTGAGAAGTTTATTGGAAACACTTGCATTTAATAATTATTTAAATTCAA
TACAATGTAACTATATCATACCACATACAGGAAGAGAAGAAGGCATCACA
TCACGGCAAGAGTTTTGACGATTGGATGCGTGAAAAAGAAGATCGCGCTc
gacaagaaaaagaaaaacatgaacaagaacaaaaagaaaaggaaagaaaa
gaagCTGAAGAAAAGGCTAAACAACAAGGTTGGTGGCTGTCTGTAGACCT
CTGTTTATAGCCTACTTGCAAGGTTTTGTGGCTGCCTGTAGACCATTGTT
TGTAGCCTACTCGTATAGGTTTAGTGAATGTCTGTAGAACTTTGTTTGTA
ACCTACTTGCATAGGTTTTGTGGCTGCCTGTAGACCTTTGTTTGTAGCCT
ACTCGTATAAGTTTAGTGCTGCCTGTAGACCTTTGTTTCTAGCCTACTTA
CAAGGTTTTGTGGCTGCCTGTAGACCATTGTCTGTAGCCTACTCGTAAAG
GTTTAGTGAATGTCTGTAGACATTTGTTTATAACCTACTTGCATAGGTTT
TGTGGCTGCATGTAGACATTTGTTTATAGCCTACTTGTAAAGGTTTGCAA
GACTATGTCAGGTAGGTTAGATATTACAACAGTTATGAACTGTGATGTTT
TAAGAAAATACTTAGTCAAGGGTAAATTTGATATTGATTATGGTAATATC
AGCAGGTAATCTGTCAAATGTAAAAGACCCCTATAAAGCGCAGAGAAGAG
GGTTAGTGGTTTTATTCCAAAGTTTGTATAGAATGGTAATGTCCTTTctt
tctaaatattttcaaaaaagtaccCGAgtaataacttttgacttattttt
tatctttacaACCCTCGACTACCAGTACACTGGGGTCGTTTATTACATCC
GTTTTATACAGTAATGTGCATGTTATTTGATAATGCGACATATGCCACGT
GAAAATGTTAATAGTTTATACAATAGTGATATTATTAACGTCATAAGTTC
TCCTTGCCATACCCCTCTCTTTCTCTTATATTAAGCCGTCCAGCGTGCTA
GACTACCCTTCAAGGGACTTCCTAAAGAAGGTGAAAGCCTTGGTTAGGGA
TCTCTAGATTCCATTCTCCAGGGGTGAAAACATAAGTATCTCAACAATGA
TTATTATCATCTTAAGGTAAATCATTCGAGAAATGGGTGAAAGAGAAGGC
AGAGTATGACCGTCTATTGAAACAACAACATGAACAAGACgctaaagaaa
atcaaaagcaaCAGAAGACGTTGAAAGGGAAAACTTTTGAAGATTGGCAA
AAAGAAATGGAAGTAAAACGAAAGCAGGATattgaagaaaagaaaacgAA
AGAGACCAAGGTATAAAACaggaatctttaacctttctcaagcaagaaaa
agtgaagccttaaaaagaTTTGCGCTGTATTTAGAATGACGTATTGAATC
TAGACTTTTCTCcgtttttacatatttttcagAATCTGACGAtaggtttt
actttcaatctggtgtttgtgtgaaaaccacgcgggtcacATGTTTTTGA
TGGGAAAGTGGATTCATTTCCCATCTAACAGTTTCGGATCTAGCCCCTTC
GGAGCTTTGAGATCAATGGTCAGAGCAAAGTTCTTTGTCTCAGACGGGAA
AGGAGTTTAAGGCAAAACTCTTCAAATTTTACAGACTGTTTTTTCATTTG
GAGATAGAAAAGCTCCTTTTTGCTTAGACGGAAATCCGTTTGACACGGGA
GACTGATAAAACGACATCATTCTCTACCGTAGAATTGACGTTGGACCCTA
AACTGATCGTTTATGACTTAAAAGAAATcgtaataaaaacattttcctaA
AAGATTGAACGTTCTCAGCAGCGTAGATACGAGTGAAGGAACATATTGCT
TAGGAGAGCAGATTGAAACGACAGAGTAATTATGTTTTTATACTACGAAT
AGGTAAGTGCTTTGttgtaaaaatctgctctcctacgcagatcgttcttc
acccctgtctacgctTCCGGTTCTtttcctaaatattttcaggaaaaggA
AAAGCAAGAAGAAGCAAAAGTACGGCGCCGAAAAGAATCATCGGCAAAAT
TCCAACAATGGTTACTGGATAAAGAGAAATTAGCTTTGGAAAAAGAAATG
CAAGAATTGAAGAAACGAAAAGTATCGACCGCTAAAAATGCTACACGTAA
AGCAAGTACAATGAAAAAGCCTGCTCCGAAATAATAACATTGTGTCTTCA
tcaaagagaaaattttgatttcataggAATCCACTGAAACATGTAGAACC
TTGACTGCTAATCTGCTTAATCGATCAACGGCTAAGTCAAAGTAAGGTAT
TGAACCATACAGGTTTTACTGTAAATAAATATTACTGATTTTAAGAATTC
GATTCCTTCATTATCAACTACTGTTTGTTACCTTCTGGTGTCATGGTAGC
ACCTAATTCCCTAAACTGGTACGGTGAAAATGTAGAGCTTTTCAGTTTGT
GACGATTTTTTCCAATAGCAAATATCGATGCACCAAAAGGAAGAAAATCA
TTTCATAAGCTAAATTTATTCTGCTTTATGCAGTGGCCAAAGCGAAGTTC
TTTTTGTCTCAG

Coding sequence (CDS) from alignment at scaffold_16:254830..262191+

>TCONS_00049485 ID=TCONS_00049485|Name=TCONS_00049485|organism=Clytia hemisphaerica|type=CDS|length=9450bp|location=Sequence derived from alignment at scaffold_16:254830..262191+ (Clytia hemisphaerica)
ATGAAAATCGGGGAAAGTAAACCGGTCTCAAATAATCCTTCCAATCATTT
ACCCATGATTCCACAGGCTAATGTTCAAAAATATAGCCCTAGACCTGCAC
GTAAAGCATCGCAAAGTTCCTACGTGCCGACTATTTCAAATAAACAACCG
CGACCACCGAGTCAAGAGAAGAAACAACGACCCGTTGCCGgtaaaatgat
ggaatcgaaCTTAAGAAAGTTTTCAGCAGCAAACCGACCTCGTTTTGTAC
CTGATCAACATTTCAAATCACCACCCCAAATCAAACACCCTGTGCTCAAC
ACTCGGCCCTCAGACCAACGCCCTTCTTCACCAGGAAATCAGCAAAACCA
TTTGAATGTACATTTGACGCTTGCATCTCAACGCCCCACATCGCCCGGTC
CTAAGGGTGCTGGGGTTGGCGAAGAAAAGAAAGTTCGAAGAATTTCCCTA
ATTAAGAGTCCAAGACCGTTATCACCAAACCCACATGGAATGAGTGCAGT
GGGAGCAATAGCTGAGCAGCCGGAAGATGAAGAAAAACCAGTTGTCATAG
AGATAGAAGAAGAACGTATCAACAAACCTTGGAATAACTGGATCAAAGCT
GTCACTGTAGAAGCAGACACAGACGTGGAAAGTGGTGGAGAACGCCCAAT
GACGCCCGATCCAGAGGGTGGTTCATCAAACAGTACACTTCAAGTACAAC
AACAGGGTAACGCTAGAAAGAAATCATTCGATCGATGGGTACAAGAGAAA
GCACAGGaggaacaagaaaaagaattacaaaagaTGAGAGAAGCTTATGA
AAAAGAAAGAGAGGAGGAAGAGAAGAAGGCATCACATCACGGCAAGAGTT
TTGACGATTGGATGCGTGAAAAAGAAGATCGCGCTcgacaagaaaaagaa
aaacatgaacaagaacaaaaagaaaaggaaagaaaagaagCTGAAGAAAA
GGCTAAACAACAAGGTAAATCATTCGAGAAATGGGTGAAAGAGAAGGCAG
AGTATGACCGTCTATTGAAACAACAACATGAACAAGACgctaaagaaaat
caaaagcaaCAGAAGACGTTGAAAGGGAAAACTTTTGAAGATTGGCAAAA
AGAAATGGAAGTAAAACGAAAGCAGGATattgaagaaaagaaaacgAAAG
AGACCAAGgaaaaggAAAAGCAAGAAGAAGCAAAAGTACGGCGCCGAAAA
GAATCATCGGCAAAATTCCAACAATGGTTACTGGATAAAGAGAAATTAGC
TTTGGAAAAAGAAATGCAAGAATTGAAGAAACGAAAAGTATCGACCGCTA
AAAATGCTACACGTAAAGCAAGTACAATGAAAAAGCCTGCTCCGAAATAA
ATGAAAATCGGGGAAAGTAAACCGGTCTCAAATAATCCTTCCAATCATTT
ACCCATGATTCCACAGGCTAATGTTCAAAAATATAGCCCTAGACCTGCAC
GTAAAGCATCGCAAAGTTCCTACGTGCCGACTATTTCAAATAAACAACCG
CGACCACCGAGTCAAGAGAAGAAACAACGACCCGTTGCCGgtaaaatgat
ggaatcgaaCTTAAGAAAGTTTTCAGCAGCAAACCGACCTCGTTTTGTAC
CTGATCAACATTTCAAATCACCACCCCAAATCAAACACCCTGTGCTCAAC
ACTCGGCCCTCAGACCAACGCCCTTCTTCACCAGGAAATCAGCAAAACCA
TTTGAATGTACATTTGACGCTTGCATCTCAACGCCCCACATCGCCCGGTC
CTAAGGGTGCTGGGGTTGGCGAAGAAAAGAAAGTTCGAAGAATTTCCCTA
ATTAAGAGTCCAAGACCGTTATCACCAAACCCACATGGAATGAGTGCAGT
GGGAGCAATAGCTGAGCAGCCGGAAGATGAAGAAAAACCAGTTGTCATAG
AGATAGAAGAAGAACGTATCAACAAACCTTGGAATAACTGGATCAAAGCT
GTCACTGTAGAAGCAGACACAGACGTGGAAAGTGGTGGAGAACGCCCAAT
GACGCCCGATCCAGAGGGTGGTTCATCAAACAGTACACTTCAAGTACAAC
AACAGGGTAACGCTAGAAAGAAATCATTCGATCGATGGGTACAAGAGAAA
GCACAGGaggaacaagaaaaagaattacaaaagaTGAGAGAAGCTTATGA
AAAAGAAAGAGAGGAGGAAGAGAAGAAGGCATCACATCACGGCAAGAGTT
TTGACGATTGGATGCGTGAAAAAGAAGATCGCGCTcgacaagaaaaagaa
aaacatgaacaagaacaaaaagaaaaggaaagaaaagaagCTGAAGAAAA
GGCTAAACAACAAGGTAAATCATTCGAGAAATGGGTGAAAGAGAAGGCAG
AGTATGACCGTCTATTGAAACAACAACATGAACAAGACgctaaagaaaat
caaaagcaaCAGAAGACGTTGAAAGGGAAAACTTTTGAAGATTGGCAAAA
AGAAATGGAAGTAAAACGAAAGCAGGATattgaagaaaagaaaacgAAAG
AGACCAAGgaaaaggAAAAGCAAGAAGAAGCAAAAGTACGGCGCCGAAAA
GAATCATCGGCAAAATTCCAACAATGGTTACTGGATAAAGAGAAATTAGC
TTTGGAAAAAGAAATGCAAGAATTGAAGAAACGAAAAGTATCGACCGCTA
AAAATGCTACACGTAAAGCAAGTACAATGAAAAAGCCTGCTCCGAAATAA
ATGAAAATCGGGGAAAGTAAACCGGTCTCAAATAATCCTTCCAATCATTT
ACCCATGATTCCACAGGCTAATGTTCAAAAATATAGCCCTAGACCTGCAC
GTAAAGCATCGCAAAGTTCCTACGTGCCGACTATTTCAAATAAACAACCG
CGACCACCGAGTCAAGAGAAGAAACAACGACCCGTTGCCGgtaaaatgat
ggaatcgaaCTTAAGAAAGTTTTCAGCAGCAAACCGACCTCGTTTTGTAC
CTGATCAACATTTCAAATCACCACCCCAAATCAAACACCCTGTGCTCAAC
ACTCGGCCCTCAGACCAACGCCCTTCTTCACCAGGAAATCAGCAAAACCA
TTTGAATGTACATTTGACGCTTGCATCTCAACGCCCCACATCGCCCGGTC
CTAAGGGTGCTGGGGTTGGCGAAGAAAAGAAAGTTCGAAGAATTTCCCTA
ATTAAGAGTCCAAGACCGTTATCACCAAACCCACATGGAATGAGTGCAGT
GGGAGCAATAGCTGAGCAGCCGGAAGATGAAGAAAAACCAGTTGTCATAG
AGATAGAAGAAGAACGTATCAACAAACCTTGGAATAACTGGATCAAAGCT
GTCACTGTAGAAGCAGACACAGACGTGGAAAGTGGTGGAGAACGCCCAAT
GACGCCCGATCCAGAGGGTGGTTCATCAAACAGTACACTTCAAGTACAAC
AACAGGGTAACGCTAGAAAGAAATCATTCGATCGATGGGTACAAGAGAAA
GCACAGGaggaacaagaaaaagaattacaaaagaTGAGAGAAGCTTATGA
AAAAGAAAGAGAGGAGGAAGAGAAGAAGGCATCACATCACGGCAAGAGTT
TTGACGATTGGATGCGTGAAAAAGAAGATCGCGCTcgacaagaaaaagaa
aaacatgaacaagaacaaaaagaaaaggaaagaaaagaagCTGAAGAAAA
GGCTAAACAACAAGGTAAATCATTCGAGAAATGGGTGAAAGAGAAGGCAG
AGTATGACCGTCTATTGAAACAACAACATGAACAAGACgctaaagaaaat
caaaagcaaCAGAAGACGTTGAAAGGGAAAACTTTTGAAGATTGGCAAAA
AGAAATGGAAGTAAAACGAAAGCAGGATattgaagaaaagaaaacgAAAG
AGACCAAGgaaaaggAAAAGCAAGAAGAAGCAAAAGTACGGCGCCGAAAA
GAATCATCGGCAAAATTCCAACAATGGTTACTGGATAAAGAGAAATTAGC
TTTGGAAAAAGAAATGCAAGAATTGAAGAAACGAAAAGTATCGACCGCTA
AAAATGCTACACGTAAAGCAAGTACAATGAAAAAGCCTGCTCCGAAATAA
ATGAAAATCGGGGAAAGTAAACCGGTCTCAAATAATCCTTCCAATCATTT
ACCCATGATTCCACAGGCTAATGTTCAAAAATATAGCCCTAGACCTGCAC
GTAAAGCATCGCAAAGTTCCTACGTGCCGACTATTTCAAATAAACAACCG
CGACCACCGAGTCAAGAGAAGAAACAACGACCCGTTGCCGgtaaaatgat
ggaatcgaaCTTAAGAAAGTTTTCAGCAGCAAACCGACCTCGTTTTGTAC
CTGATCAACATTTCAAATCACCACCCCAAATCAAACACCCTGTGCTCAAC
ACTCGGCCCTCAGACCAACGCCCTTCTTCACCAGGAAATCAGCAAAACCA
TTTGAATGTACATTTGACGCTTGCATCTCAACGCCCCACATCGCCCGGTC
CTAAGGGTGCTGGGGTTGGCGAAGAAAAGAAAGTTCGAAGAATTTCCCTA
ATTAAGAGTCCAAGACCGTTATCACCAAACCCACATGGAATGAGTGCAGT
GGGAGCAATAGCTGAGCAGCCGGAAGATGAAGAAAAACCAGTTGTCATAG
AGATAGAAGAAGAACGTATCAACAAACCTTGGAATAACTGGATCAAAGCT
GTCACTGTAGAAGCAGACACAGACGTGGAAAGTGGTGGAGAACGCCCAAT
GACGCCCGATCCAGAGGGTGGTTCATCAAACAGTACACTTCAAGTACAAC
AACAGGGTAACGCTAGAAAGAAATCATTCGATCGATGGGTACAAGAGAAA
GCACAGGaggaacaagaaaaagaattacaaaagaTGAGAGAAGCTTATGA
AAAAGAAAGAGAGGAGGAAGAGAAGAAGGCATCACATCACGGCAAGAGTT
TTGACGATTGGATGCGTGAAAAAGAAGATCGCGCTcgacaagaaaaagaa
aaacatgaacaagaacaaaaagaaaaggaaagaaaagaagCTGAAGAAAA
GGCTAAACAACAAGGTAAATCATTCGAGAAATGGGTGAAAGAGAAGGCAG
AGTATGACCGTCTATTGAAACAACAACATGAACAAGACgctaaagaaaat
caaaagcaaCAGAAGACGTTGAAAGGGAAAACTTTTGAAGATTGGCAAAA
AGAAATGGAAGTAAAACGAAAGCAGGATattgaagaaaagaaaacgAAAG
AGACCAAGgaaaaggAAAAGCAAGAAGAAGCAAAAGTACGGCGCCGAAAA
GAATCATCGGCAAAATTCCAACAATGGTTACTGGATAAAGAGAAATTAGC
TTTGGAAAAAGAAATGCAAGAATTGAAGAAACGAAAAGTATCGACCGCTA
AAAATGCTACACGTAAAGCAAGTACAATGAAAAAGCCTGCTCCGAAATAA
ATGAAAATCGGGGAAAGTAAACCGGTCTCAAATAATCCTTCCAATCATTT
ACCCATGATTCCACAGGCTAATGTTCAAAAATATAGCCCTAGACCTGCAC
GTAAAGCATCGCAAAGTTCCTACGTGCCGACTATTTCAAATAAACAACCG
CGACCACCGAGTCAAGAGAAGAAACAACGACCCGTTGCCGgtaaaatgat
ggaatcgaaCTTAAGAAAGTTTTCAGCAGCAAACCGACCTCGTTTTGTAC
CTGATCAACATTTCAAATCACCACCCCAAATCAAACACCCTGTGCTCAAC
ACTCGGCCCTCAGACCAACGCCCTTCTTCACCAGGAAATCAGCAAAACCA
TTTGAATGTACATTTGACGCTTGCATCTCAACGCCCCACATCGCCCGGTC
CTAAGGGTGCTGGGGTTGGCGAAGAAAAGAAAGTTCGAAGAATTTCCCTA
ATTAAGAGTCCAAGACCGTTATCACCAAACCCACATGGAATGAGTGCAGT
GGGAGCAATAGCTGAGCAGCCGGAAGATGAAGAAAAACCAGTTGTCATAG
AGATAGAAGAAGAACGTATCAACAAACCTTGGAATAACTGGATCAAAGCT
GTCACTGTAGAAGCAGACACAGACGTGGAAAGTGGTGGAGAACGCCCAAT
GACGCCCGATCCAGAGGGTGGTTCATCAAACAGTACACTTCAAGTACAAC
AACAGGGTAACGCTAGAAAGAAATCATTCGATCGATGGGTACAAGAGAAA
GCACAGGaggaacaagaaaaagaattacaaaagaTGAGAGAAGCTTATGA
AAAAGAAAGAGAGGAGGAAGAGAAGAAGGCATCACATCACGGCAAGAGTT
TTGACGATTGGATGCGTGAAAAAGAAGATCGCGCTcgacaagaaaaagaa
aaacatgaacaagaacaaaaagaaaaggaaagaaaagaagCTGAAGAAAA
GGCTAAACAACAAGGTAAATCATTCGAGAAATGGGTGAAAGAGAAGGCAG
AGTATGACCGTCTATTGAAACAACAACATGAACAAGACgctaaagaaaat
caaaagcaaCAGAAGACGTTGAAAGGGAAAACTTTTGAAGATTGGCAAAA
AGAAATGGAAGTAAAACGAAAGCAGGATattgaagaaaagaaaacgAAAG
AGACCAAGgaaaaggAAAAGCAAGAAGAAGCAAAAGTACGGCGCCGAAAA
GAATCATCGGCAAAATTCCAACAATGGTTACTGGATAAAGAGAAATTAGC
TTTGGAAAAAGAAATGCAAGAATTGAAGAAACGAAAAGTATCGACCGCTA
AAAATGCTACACGTAAAGCAAGTACAATGAAAAAGCCTGCTCCGAAATAA
ATGAAAATCGGGGAAAGTAAACCGGTCTCAAATAATCCTTCCAATCATTT
ACCCATGATTCCACAGGCTAATGTTCAAAAATATAGCCCTAGACCTGCAC
GTAAAGCATCGCAAAGTTCCTACGTGCCGACTATTTCAAATAAACAACCG
CGACCACCGAGTCAAGAGAAGAAACAACGACCCGTTGCCGgtaaaatgat
ggaatcgaaCTTAAGAAAGTTTTCAGCAGCAAACCGACCTCGTTTTGTAC
CTGATCAACATTTCAAATCACCACCCCAAATCAAACACCCTGTGCTCAAC
ACTCGGCCCTCAGACCAACGCCCTTCTTCACCAGGAAATCAGCAAAACCA
TTTGAATGTACATTTGACGCTTGCATCTCAACGCCCCACATCGCCCGGTC
CTAAGGGTGCTGGGGTTGGCGAAGAAAAGAAAGTTCGAAGAATTTCCCTA
ATTAAGAGTCCAAGACCGTTATCACCAAACCCACATGGAATGAGTGCAGT
GGGAGCAATAGCTGAGCAGCCGGAAGATGAAGAAAAACCAGTTGTCATAG
AGATAGAAGAAGAACGTATCAACAAACCTTGGAATAACTGGATCAAAGCT
GTCACTGTAGAAGCAGACACAGACGTGGAAAGTGGTGGAGAACGCCCAAT
GACGCCCGATCCAGAGGGTGGTTCATCAAACAGTACACTTCAAGTACAAC
AACAGGGTAACGCTAGAAAGAAATCATTCGATCGATGGGTACAAGAGAAA
GCACAGGaggaacaagaaaaagaattacaaaagaTGAGAGAAGCTTATGA
AAAAGAAAGAGAGGAGGAAGAGAAGAAGGCATCACATCACGGCAAGAGTT
TTGACGATTGGATGCGTGAAAAAGAAGATCGCGCTcgacaagaaaaagaa
aaacatgaacaagaacaaaaagaaaaggaaagaaaagaagCTGAAGAAAA
GGCTAAACAACAAGGTAAATCATTCGAGAAATGGGTGAAAGAGAAGGCAG
AGTATGACCGTCTATTGAAACAACAACATGAACAAGACgctaaagaaaat
caaaagcaaCAGAAGACGTTGAAAGGGAAAACTTTTGAAGATTGGCAAAA
AGAAATGGAAGTAAAACGAAAGCAGGATattgaagaaaagaaaacgAAAG
AGACCAAGgaaaaggAAAAGCAAGAAGAAGCAAAAGTACGGCGCCGAAAA
GAATCATCGGCAAAATTCCAACAATGGTTACTGGATAAAGAGAAATTAGC
TTTGGAAAAAGAAATGCAAGAATTGAAGAAACGAAAAGTATCGACCGCTA
AAAATGCTACACGTAAAGCAAGTACAATGAAAAAGCCTGCTCCGAAATAA
ATGAAAATCGGGGAAAGTAAACCGGTCTCAAATAATCCTTCCAATCATTT
ACCCATGATTCCACAGGCTAATGTTCAAAAATATAGCCCTAGACCTGCAC
GTAAAGCATCGCAAAGTTCCTACGTGCCGACTATTTCAAATAAACAACCG
CGACCACCGAGTCAAGAGAAGAAACAACGACCCGTTGCCGgtaaaatgat
ggaatcgaaCTTAAGAAAGTTTTCAGCAGCAAACCGACCTCGTTTTGTAC
CTGATCAACATTTCAAATCACCACCCCAAATCAAACACCCTGTGCTCAAC
ACTCGGCCCTCAGACCAACGCCCTTCTTCACCAGGAAATCAGCAAAACCA
TTTGAATGTACATTTGACGCTTGCATCTCAACGCCCCACATCGCCCGGTC
CTAAGGGTGCTGGGGTTGGCGAAGAAAAGAAAGTTCGAAGAATTTCCCTA
ATTAAGAGTCCAAGACCGTTATCACCAAACCCACATGGAATGAGTGCAGT
GGGAGCAATAGCTGAGCAGCCGGAAGATGAAGAAAAACCAGTTGTCATAG
AGATAGAAGAAGAACGTATCAACAAACCTTGGAATAACTGGATCAAAGCT
GTCACTGTAGAAGCAGACACAGACGTGGAAAGTGGTGGAGAACGCCCAAT
GACGCCCGATCCAGAGGGTGGTTCATCAAACAGTACACTTCAAGTACAAC
AACAGGGTAACGCTAGAAAGAAATCATTCGATCGATGGGTACAAGAGAAA
GCACAGGaggaacaagaaaaagaattacaaaagaTGAGAGAAGCTTATGA
AAAAGAAAGAGAGGAGGAAGAGAAGAAGGCATCACATCACGGCAAGAGTT
TTGACGATTGGATGCGTGAAAAAGAAGATCGCGCTcgacaagaaaaagaa
aaacatgaacaagaacaaaaagaaaaggaaagaaaagaagCTGAAGAAAA
GGCTAAACAACAAGGTAAATCATTCGAGAAATGGGTGAAAGAGAAGGCAG
AGTATGACCGTCTATTGAAACAACAACATGAACAAGACgctaaagaaaat
caaaagcaaCAGAAGACGTTGAAAGGGAAAACTTTTGAAGATTGGCAAAA
AGAAATGGAAGTAAAACGAAAGCAGGATattgaagaaaagaaaacgAAAG
AGACCAAGgaaaaggAAAAGCAAGAAGAAGCAAAAGTACGGCGCCGAAAA
GAATCATCGGCAAAATTCCAACAATGGTTACTGGATAAAGAGAAATTAGC
TTTGGAAAAAGAAATGCAAGAATTGAAGAAACGAAAAGTATCGACCGCTA
AAAATGCTACACGTAAAGCAAGTACAATGAAAAAGCCTGCTCCGAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031395XLOC_031395Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049485-proteinTCONS_00049485-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049485-exon-scaffold_16-1491911889:254830..255074TCONS_00049485-exon-scaffold_16-1491911889:254830..255074Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1510915933:254830..255074TCONS_00049485-exon-scaffold_16-1510915933:254830..255074Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1575043694:254830..255074TCONS_00049485-exon-scaffold_16-1575043694:254830..255074Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1491911889:255679..256088TCONS_00049485-exon-scaffold_16-1491911889:255679..256088Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1510915933:255679..256088TCONS_00049485-exon-scaffold_16-1510915933:255679..256088Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1575043694:255679..256088TCONS_00049485-exon-scaffold_16-1575043694:255679..256088Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1491911889:256693..256938TCONS_00049485-exon-scaffold_16-1491911889:256693..256938Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1510915933:256693..256938TCONS_00049485-exon-scaffold_16-1510915933:256693..256938Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1575043694:256693..256938TCONS_00049485-exon-scaffold_16-1575043694:256693..256938Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1491911889:257131..257285TCONS_00049485-exon-scaffold_16-1491911889:257131..257285Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1510915933:257131..257285TCONS_00049485-exon-scaffold_16-1510915933:257131..257285Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1575043694:257131..257285TCONS_00049485-exon-scaffold_16-1575043694:257131..257285Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1491911889:257753..257934TCONS_00049485-exon-scaffold_16-1491911889:257753..257934Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1510915933:257753..257934TCONS_00049485-exon-scaffold_16-1510915933:257753..257934Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1575043694:257753..257934TCONS_00049485-exon-scaffold_16-1575043694:257753..257934Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1491911889:259660..259807TCONS_00049485-exon-scaffold_16-1491911889:259660..259807Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1510915933:259660..259807TCONS_00049485-exon-scaffold_16-1510915933:259660..259807Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1575043694:259660..259807TCONS_00049485-exon-scaffold_16-1575043694:259660..259807Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1491911889:260746..260939TCONS_00049485-exon-scaffold_16-1491911889:260746..260939Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1510915933:260746..260939TCONS_00049485-exon-scaffold_16-1510915933:260746..260939Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1575043694:260746..260939TCONS_00049485-exon-scaffold_16-1575043694:260746..260939Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1491911889:261622..262191TCONS_00049485-exon-scaffold_16-1491911889:261622..262191Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1510915933:261622..262191TCONS_00049485-exon-scaffold_16-1510915933:261622..262191Clytia hemisphaericaexon
TCONS_00049485-exon-scaffold_16-1575043694:261622..262191TCONS_00049485-exon-scaffold_16-1575043694:261622..262191Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:254830..262191 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.191676	0.277046	0.0200174	0.388375	0.43863	0.30251	1.65549	1.7328	0	0	0.172214	0.477678	4.82877	0.255472	0.523942	0.0120743	0	0.000172457	0.245902	0.0738727	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049485 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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