TCONS_00049452 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049452
Unique NameTCONS_00049452
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2921

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049452 ID=TCONS_00049452|Name=TCONS_00049452|organism=Clytia hemisphaerica|type=transcript|length=2921bp
CATTATTCCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGTTATTTGG
ATAGGAGTGGTGTATCTTTTTTTGGAGGATGTTTTCCACACCCTTGCTGC
TTATACTTTTTACACATCTTTGTGGTAAGGTGATTTCAACGGCCAACGGC
GACAAAGAGTCAGTTCATGTGCGCATAAAGCGGCAACAAGCGCCACAAAA
CTACCAACTTCCACCACACCTTCGACAGCCTCAACCAAACAATAGACAAC
ATTTCAGACTTCCAGCTTATCTGAGACAACCACAAACCAACCCTTATCTT
AGACAACCTCGACCTGATCCACGATATGCACCCAACCGACCAAGACCAAA
TCCACGTTTTCCCAATCCGCCGAGTCCTAATACTCGCTTCCCTCAAAATC
AGCCTCGACCTGACCCAAGGTATCAGCCTCGCCCTGACCCAAGGTACCAG
CCTCGTCCTAATCCTCGTTATCCAAACCAGCCACGCCCTACTTCGAATAG
GGGTCAACCACCACGTAGACCTGGACCATTTCGTCCGCCTCCTTTAAGAG
ATTTGCATGGTTACCAACAATCACCAACAAGACCTGGAGAAATCTCCATC
AATTTCATCAACAAATCTGGCAGGAGAATCAACATGTTCCAGTCCCTGCC
TTACGGTCACGAGACACGCTTCACTTTCACTTTACGACCGAACGAGCCGC
GAAGGGTGAGCGTACAACCAGATAATTCTTTCTGGCAAGCATATGATATG
ACGACAAGCTTTCCTCTCTACATCAATGGTCAGCCGAGCCTTGAAACATA
TCTTCTTCGACAAGGAACGAGTGTAGATGCACGAATTACTTCACCCAACT
TACGAGCAGAGCCAGTGAAGCGCGATCGAAGTGTTCCACGCTTTATCGAA
ACACAGGTGGTGGTGGACAAATCAATGCTGGACCACCATGGTGAACAGAA
AGTCATGAATTACACCATCATGCTCATGAATTCGGTGACGCGGACGTTTT
TGCATCGATCGTTCGGAGCGCCCATCTACGTTTCTGTTGTCAACATTCAC
CTTATGAAGAACAAACCGTCGTATTACCGTATCGTGACCAATCGTCCGGA
AATCAGCGTTCCCGGAGCATGTCGGTATTCAAGAGAAGTTGCTCAACGTA
ACAACTCGGTGGATTTTCATCTCATCTTGACAAGggaGGATATTGGACCA
GCAGGGTTTGCAGCTATGTATACAATGTGTAGTCGCAGAAGTTGTGCATT
AGTCAAGGAGAACGGACCCGACACTTCTTTCGTCATCACTCATGAACTTG
CACACGCTTTGGGTATCGATCATGACGAGGACGATGGTTGTGGAAGAGAG
AATTTGTCCGGTGGAAATATTATGGTCAAAAAGTTGTATGCTACCTCTTC
CAATTTTCGATGGTCCAAATGTAGTGCGAAAAtgatttggcaaaatttga
aATACTTCACGTGTTTAAAGAACAAACCAAAAATGCTTCCCACATTCAAA
AAAAGCATGGATTGGCTACCAGGGGAGCTGATGGGAATTAAAGATCAATG
TCGAAGCTATCATGGTTCCTCCGCTCTTCCTTGCACACCCAGGAATCCAT
TGACGGCGTGCAGATATTTATGGTGTCGACCCAATCAGAGTGCACCTTGT
CAACCTGTATGGTGGCATGCTCCTTTGGAAGGCTCAACGTGTGCCAAATC
AAAGTGGTGCAAAAGAGGGCGTTGTGTGACCAAGATGAAGATCAAACCAG
TTAACGGTGGGTGGTCCAAATATTCGGAATTCACACCACCCTGCAACCGA
AAGTCCACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCACCAATCC
CAAGCCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAATATC
GTATTTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATGCGA
CAATTGCTCTTAAGCGGAGAAATCGATTGGGAAAACATACGACAGAACGG
GTGCAGTTATAAGAATGATAACGTCACTAAATGGAGAGTTTATCGCGAAA
GCGAGCAACGTAGACAAGTAAAGTCGTTAAATTTAACGTGCGATTTTGAA
AGCCCTGGATGCGGATGGAAGAATTCAAAGAAGGGCGTCAAAGGGTGGAA
TATTGGCAAAGGAGCAACGCCCTCACACCGAACAGGTCCTTCCGTTGATA
ACACCATCAAGACCAAGACAGGGAAATATCTTTACTTTGAGGCGTCATGG
GTGTCAGGTACCACCCCTCTGAGGAGAGGGTCACGTGTCATTTTGGAATC
ACCTATCATCTTCTCATCACAAGTGTGTATGAAATTCGCTTATCACATGT
ATGGAAAGGGTGTTGGCTCGTTAGAAATACACATTCGAAGGGGCAAGCAT
TCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCA
AGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGATCACGATCGAAG
CAGTGCGTGGTAATTCATATTACGGAGATATAGCAATTgatgatattcaa
ttttcttacGGGCTGTGTAATGCAAAGTCAAGTCAAGACGATAAACAGAT
CTGTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGGA
GACTTCCTGATGGCTATCCCTGTAAATtaccaaaatcgaaaaataatgTT
TGCTTTAGACAAGTTTGTCAGcccGTTAACTGTCATGGTGTTATAAATGG
CCGAAAATGCTGACgttacaaaaatgatttttgagaaaatttaatgTATT
TAATCagttttatttgtaaaacttatatttttatgaaagaGAATAGAAAA
AGTTTAGACCTGAATAGAACGCTGGAAATATAAATAATATACTGTACATC
ATTGACCACAAAATGATCAAA
Run BLAST on NCBI

transcript from alignment at scaffold_159:135402..144425-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049452 ID=TCONS_00049452|Name=TCONS_00049452|organism=Clytia hemisphaerica|type=transcript|length=9024bp|location=Sequence derived from alignment at scaffold_159:135402..144425- (Clytia hemisphaerica)
CATTATTCCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGTTATTTGG
ATAGGAGTGGTGTATCTTTTTTTGGAGGATGTTTTCCACACCCTTGCTGC
TTATACTTTTTACACATCTTTGTGGTGTAAGTTTCATCTACACTGTATTT
CACTGTATATCATGTNGTTTTAGGCTGAAAGCTGAAATACAGATATAGCT
GACCAGGAACAGACCCAATGGTATGCAGTACTCATTTTGTCTTGTGCAAA
ACAAATACAAACAGAAGAAGATAATCTCCAAGTCTCCGAATGTTTACACT
CACCCAAAATAAAGCTCAAAGAAATTATTGTACTTGATTGATATCACGGT
GAGAAGTTGGAAAAGCCATGCTAAAAGACACGAAAATGGTGATGGAAATA
CGCGTTAACAAAGATAAGTAACGCTTAATAAACGCTGGCTGATTTGATAA
ATATTGACAATCACTTCAAACAAAGAATTTCACACTCACAAAAAATCGCA
CAGAGAGAGCTTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCAGCGT
GGTTTGGAGGAGCAGAGAGAAAAAAAGAAAATGTGAAAGGATTTTTTTGC
GAAGGGTTTGAGTCATGATAATAAAACGCGTTTGTTGAGTATTTTCGTTT
CAACAAGTGATATTATTTATTATTGTACCATGAGCAAGTTGTTCGGGATT
CAATGTAAGATGATTCTTTTGCAAAACATCAATCACTTCTCATGTCATAC
TACACTGTGTACTACAAAAAAGAAAGCAAGAAAAAAAAGTTTTGAAAAAT
TGATGTGTTGTTGAATTGAAAAAGCTGGAAGTTTGAAACTCGAGATTTTT
ATTGGCAATTCAGTGGTTTCGAAGTTGATGATTCTAATTATTGTGTAAAA
CTTTCAACCTTGTTCCTTTCTTTCTTAGACATTAAAAGAATATTTGGTCT
TTGGTTTATGAACATTATCCCACCAAATGCTGAGTTTAGAATAAAGTGAT
CGTGTTATTTGGATAGGAGTGGTGTATCTTTTTTTGGGAGGATGTTTTCC
ACACCCTTGCTGCTTATACTTTTTACACATCTTTGTGGTGTAAGTTTCAT
CTACACTGTATTTCACTGTATATCATGTCACTTATTATTAAGTAGTATGT
TTGAACGTTAATTAGTACAAATAACCTAAAGTTTAGGCAACACTTTGTTT
CTAAACAATTCACTTTATTTTAGAAGGTGATTTCAACGGCCAACGGCGAC
AAAGGTATGAGTCATTCCTAATACAAACTTTATACTATGCTGCTTTCTAT
GACGGAAGGGTTTTTGCGGTGATGAATATTTTGTTCTTAAAACAAACAAT
AATGACACCCTTCATTTCATTTTTACAGAGTCAGTTCATGTGCGCATAAA
GCGGCAACAAGCGCCACAAAACTACCAACTTCCACCACACCTTCGACAGC
CTCAACCAAACAATAGACAACATTTCAGACTTCCAGCTTATCTGAGACAA
CCACAAACCAACCCTTATCTTAGACAACCTCGACCTGATCCACGATATGC
ACCCAACCGACCAAGACCAAATCCACGTTTTCCCAATCCGCCGAGTCCTA
ATACTCGCTTCCCTCAAAATCAGCCTCGACCTGACCCAAGGTATCAGCCT
CGCCCTGACCCAAGGTACCAGCCTCGTCCTAATCCTCGTTATCCAAACCA
GCCACGCCCTACTTCGAATAGGGGTCAACCACCACGTAGACCTGGACCAT
TTCGTCCGCCTCCTTTAAGAGATTTGCATGGTTACCAACAATCACCAACA
AGACCTGGAGAAATCTCCATCAATTTCATCAACAAATCTGGCAGGAGAAT
CAACGTAAGTTTAACAACAAAGTCTTCTTATTCACCATTCAAAACGTGAC
CGAGATGAGCACGTAATTCCCTTTCCACCTTCTTTCATTACAGATGTTCC
AGTCCCTGCCTTACGGTCACGAGACACGCTTCACTTTCACTTTACGACCG
AACGAGCCGCGAAGGGTGAGCGTACAACCAGATAATTCTTTCTGGCAAGC
ATATGATATGACGACAAGCTTTCCTCTCTACATCAATGGTCAGCCGAGCC
TTGAAACATATCTTCTTCGACAAGGAACGAGTGTAGATGCACGAATTACT
TCACGTAAGAAGGCTCTCTCAGTGGAAACAATTCAATATCTATTTAACAA
GTAATTTGAAAAATATTTAGTGTACAGCAATTCTTCTCAAATATCTAATT
TTAACTTTAATTCCTTGCAGCCAACTTACGAGCAGAGCCAGTGAAGCGCG
ATCGAAGTGTTCCACGCTTTATCGAAACACAGGTGGTGGTGGACAAATCA
ATGCTGGACCACCATGGTGAACAGAAAGTCATGAATTACACCATCATGCT
CATGAATTCGGTACGTTAGAGTGCAAAACCTTCTTCAAAGTATAATGAAA
ATCTTAAGAAGGTGATTGTTACCATTTTTCATCTTCATCTACAGGTGACG
CGGACGTTTTTGCATCGATCGTTCGGAGCGCCCATCTACGTTTCTGTTGT
CAACATTCACCTTATGAAGAACAAACCGGTCAGTACAACATATATTGTCT
CAACACCACACACAGTACCAGACCCCTTCATTCACATTGTATTCTTCCCT
TTCACATTTTCAGTCGTATTACCGTATCGTGACCAATCGTCCGGAAATCA
GCGTTCCCGGAGCATGTCGGTATTCAAGAGAAGTTGCTCAACGTAACAAC
TCGGTGGATTTTCATCTCATCTTGACAAGGTATACATATTGCAGCATTTT
CTCTAACCATTCATTATTTTACATCCCTACATCAATTTCTAATAATTGAT
CAAGGTATTTTCCTAAGATTTTCCAAACCTTCTCTTCAATGGCAGATTTA
TATAAAAAGTTGTTTATTCCTTTTCCAAGCTCTATCTCTTGAACTGGAGC
AAGAATCATCATTTTTAAAAGAGATTTATTTTATTTTCAGGGAGGATATT
GGACCAGCAGGTAAGTTGATTTCTTGAAAAAATTCTCCACCAGTGATTTG
CTTATATAGATTTTGTACTGCTCAAAAACCTTCTTCACTCAATTTTATCT
TTCCAACACACACAGGGTTTGCAGCTATGTATACAATGTGTAGTCGCAGA
AGTTGTGCATTAGTCAAGGAGAACGGACCCGACACTTCTTTCGTCATCAC
TCATGAACTTGCACACGCGTAAGTTATACAACAGAGATAGGAGATCTTTA
TTTATTAGCTGTTACCCGTTATATTTTCTAACGTTGACCATGTCTACAAC
ACTGTGTTTTCACACCTTGGTAAAGTTTAAGCAACCGACACTAAGGTTTG
CTGGCTGTTACTTATGATAATAGTTTCCCGATTACCCGATTACCGTAATC
CGTTTTTGTGATTCAGTTTGGGTATCGATCATGACGAGGACGATGGTTGT
GGAAGAGAGAATTTGTCCGGTGGAAATATTATGGTCAAAAAGTTGTATGC
TACCTCTTCCAATTTTCGATGGTCCAAATGTAGTGCGAAAATGATTTGGC
AAAATTTGAAGTAAGCAAATGTGTCAAAAGAGAACTAATTTTATTGATGA
ATATTGCTTTGAAAGAGGTAAATAGAATAAATACCGTAGATAACTAGATA
AATAGCAATTTCTTTTTCCATTGTTTAGATACTTCACGTGTTTAAAGAAC
AAACCAAAAATGCTTCCCACATTCAAAAAAAGCATGGATTGGCTACCAGG
GGAGCTGATGGGAATTAAAGATCAATGTCGAAGCTATCATGGTTCCTCCG
CTCTTCCTTGCACACCCAGGGTTTGTTCCATCATTTTTGTTTTTCATGTA
TTCTATAACAGATATACTCTACTAGAATCGTAAGTTGACATAATTCGATG
TGAACTCATCATCGAAGGACGATTTGTAGTGTACTCTTTCACAATTTCAG
AATCCATTGACGGCGTGCAGATATTTATGGTGTCGACCCAATCAGAGTGC
ACCTTGTCAACCTGTATGGTGGCATGCTCCTTTGGAAGGCTCAACGTGTG
CCAAATCAAAGGTGAGATTTCTTTTGGAGTTTATGTGTCTTATTTAAAGC
TTACAGACAAAGAGGTAATTAATCATAAAGTTTCTCATAAAAACATGAAT
TTATCGAACAATTTGTGGCTAATTTGGCTAACCATCATCTCTTTTTGGAC
AGTGGTGCAAAAGAGGGCGTTGTGTGACCAAGATGAAGATCAAACCAGTT
AACGGTGGGTGGTCCAAATATTCGGAATTCACACCACCCTGCAACCGAAA
GTCCACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCACCAATCCCA
AGTAAGACCCAAAATAAATCTCTTCGAAGCTTCCATTCCAAACCCAGCCT
TGACAGTATATTCACAACTGACTATCATACTTTATTCTGATTCTCTTTAA
CAGGCCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAATATC
GTATTTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATGCGA
CAATTGGTAAGCAATCTTCAACAAGAGAAAGTAGAAGGCACCATGATGGA
AGAAACAAACTATTCTTCTCATCACCTTTTTATTCTTCTGATTCAGCTCT
TAAGCGGAGAAATCGATTGGGAAAACATACGACAGAACGGGTGCAGTTAT
AAGAATGATAACGTCACTAAATGGAGAGTTTATCGCGAAAGCGAGCAACG
TAGACAAGGTAAGATCATTATGTTTTACGTTCTTTCATTGGATTCGTCAA
TGTAAAACAACAATCTCCTTAAGAAAATGAAAGTGAACAGGCCTTTGGTG
CATCTCATCTATAATTTTTATTTTGCAGTAAAGTCGTTAAATTTAACGTG
CGATTTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAAGAAGGGCGTCA
AAGGGTGGAATATTGGCAAAGGAGCAACGCCCTCACACCGAACAGGTCCT
TCCGTTGATAACACCATCAAGACCAAGACAGGGAAATATCTTTACTTTGA
GGCGTCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGTCACGTGTCA
TTTTGGAATCACCTATCATCTTCTCATCACAAGTGTGTATGAAATTCGCT
TATCACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATACACATTCGAAG
GGGCAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATA
AGTGGTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGGTT
GGTCACCAAACAATATAATAACTCACTTTAAGTCCATTCATTCCATCAAA
GGGTTGACTGTTGGGATTGTTACCATTATTCTGTTTCTCAGTTATGTCGA
TCAGGATGGTCAGAACACTTGCTCCTTTCTTGATGATGAAAAGAAGGACT
TACCGACCATGACCAATATATCTCTGTTTCTTATTAGATCACGATCGAAG
CAGTGCGTGGTAATTCATATTACGGAGATATAGCAATTGATGATATTCAA
TTTTCTTACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCGAA
GGGAAAAGTGGGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAGATA
AAATAAGTCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAAAC
CTTACCTGTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATAAA
CAGATCTGTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCG
AAGGAGACTTCCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAAATA
ATGTTTGCTTTAGACAAGTTTGTCAGGTAAATAAACATTTTATTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATCAAA
CCAGTTAACGGTGGGTGGTCCAAGTATTCGGAATTCACACCACCCTGCAA
CCGAAAGTCCACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCACCA
ATCCCAAGTAAGACCCAAAATAAATCTCTTCGAAGCTTCCATTCCAAACC
CAGCCTTGACAGTATATTCACAACTGACTATCATACTTTATTCTGATTCT
CTTTAACAGGCCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAATC
AATATCGTATTTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAAC
ATGCGACAATTGGTAAGCAATCTTCAACAAGAGAAAGTAGAAGGCACCAT
GATGGAAGAAACAAACTATTCTTCTCATCACCTTTTTATTCTTCTGATTC
AGCTCTTAAGCGGAGAAATCGATTGGGAAAACATACGACAGAACGGGTGC
AGTTATAAGAATGATAACGTCACTAAATGGAGAGTTTATCGAGAAAGCGA
GCAACGTAGACAAGGTAAGATCATTATGTTTTACGTTCTTTCATTGGATT
CGTCAATGTAAAACATCAATCCCCTTAAGAAAATGAAAGTGAACAGGCCT
TTGGTGCATCTCATCTATAATTTTTATTTTGCAGTAAAGTCGTTGAATTT
AACGTGCGATTTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAAGAAGG
GCGTCAAAGGGTGGAATATTGGCAAAGGAGCAACGCCCTCACACCGAACA
GGTCCTTCCGTTGATAACACCATCAAGACCAAGACAGGGAAATATCTTTA
CTTTGAGGCGTCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGTCAC
GTGTCATTTTGGAATCACCTATCATCTTCTCATCACAAGTGTGTATGAAA
TTCGCTTATCACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATACACAT
TCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATCAAG
GTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAGTAT
AAGGTTGGTCACCAAACAATATAATAACTCACTTTAAGTCCATTCATTCC
ATCAAAGGGTTGACTGTTGGGATTGTTACCATTATTCTGTTTCTCAGTTA
TGTCGATCAGGATGGTCAGAACACTTGCTCCTTTCTTGATGATGAAAAGA
AGGACTTACCGACCATGACCAATATATCTCTGTTTCTTATTAGATCACGA
TCGAAGCAGTGCGTGGTAATTCATATTACGGAGATATAGCAATTGATGAT
ATTCAATTTTCTTACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTA
TTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTATTTTCTCAAACAACGT
CAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTG
AAAAACCTTACCTGTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGAC
GATAAACAGATCTGTACTAACGTGTGTATTACCCAAGATAATTCAAAGAT
GGTTCGAAGGAGACTTCCTGATGGCTATCCCTGTAAATTACCAAAATCGA
AAAATAATGTTTGCTTTAGACAAGTTTGTCAGGTAAATAAACATTTTATT
NGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGA
AAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATC
AACATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCACTTTAAG
TCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTATTCT
GTTTCTCAGTTATGTCGATCAGGATGGTCAGAATACTTGCTCCTTTCTTG
ATGATGAAAAGAAGGAATTACCGACCATGACCAATATATCTCAATATGTT
TCTTATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGA
TATAGCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGT
CAAGTCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTA
TTTTCTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAA
ATGGTCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTT
CTTTTCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTACCC
AAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGT
AAATTACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGT
AAATAAACATTTTATTGCAAATGATCCAGATAAAGGTATTGAACCGCATT
GAATATCTTTAATCTTTATTCTCATTCACCAAAGAATGAGAGATAATGAC
AATTTATCATTCTTAATTTTTCAGCCCGTTAACTGTCATGGTGTTATAAA
TGGCCGAAAATGCTGACGTTACAAAAATGATTTTTGAGAAAATTTAATGT
ATTTAATCAGTTTTATTTGTAAAACTTATATTTTTATGAAAGAGAATAGA
AAAAGTTTAGACCTGAATAGAACGCTGGAAATATAAATAATATACTGTAC
ATCATTGACCACAAAATGATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031382XLOC_031382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049452-exon-scaffold_159-1575043694:144300..144425TCONS_00049452-exon-scaffold_159-1575043694:144300..144425Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:143172..143202TCONS_00049452-exon-scaffold_159-1575043694:143172..143202Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:142572..143047TCONS_00049452-exon-scaffold_159-1575043694:142572..143047Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:142272..142482TCONS_00049452-exon-scaffold_159-1575043694:142272..142482Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:142016..142155TCONS_00049452-exon-scaffold_159-1575043694:142016..142155Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:141848..141931TCONS_00049452-exon-scaffold_159-1575043694:141848..141931Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:141647..141762TCONS_00049452-exon-scaffold_159-1575043694:141647..141762Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:141416..141435TCONS_00049452-exon-scaffold_159-1575043694:141416..141435Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:141208..141310TCONS_00049452-exon-scaffold_159-1575043694:141208..141310Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:140866..141009TCONS_00049452-exon-scaffold_159-1575043694:140866..141009Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:140606..140747TCONS_00049452-exon-scaffold_159-1575043694:140606..140747Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:140365..140475TCONS_00049452-exon-scaffold_159-1575043694:140365..140475Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:140075..140223TCONS_00049452-exon-scaffold_159-1575043694:140075..140223Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:139870..139972TCONS_00049452-exon-scaffold_159-1575043694:139870..139972Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:139668..139779TCONS_00049452-exon-scaffold_159-1575043694:139668..139779Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:139129..139547TCONS_00049452-exon-scaffold_159-1575043694:139129..139547Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:136733..136832TCONS_00049452-exon-scaffold_159-1575043694:136733..136832Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:135728..135861TCONS_00049452-exon-scaffold_159-1575043694:135728..135861Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1575043694:135402..135601TCONS_00049452-exon-scaffold_159-1575043694:135402..135601Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:144300..144425TCONS_00049452-exon-scaffold_159-1510915933:144300..144425Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:143172..143202TCONS_00049452-exon-scaffold_159-1510915933:143172..143202Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:142572..143047TCONS_00049452-exon-scaffold_159-1510915933:142572..143047Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:142272..142482TCONS_00049452-exon-scaffold_159-1510915933:142272..142482Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:142016..142155TCONS_00049452-exon-scaffold_159-1510915933:142016..142155Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:141848..141931TCONS_00049452-exon-scaffold_159-1510915933:141848..141931Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:141647..141762TCONS_00049452-exon-scaffold_159-1510915933:141647..141762Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:141416..141435TCONS_00049452-exon-scaffold_159-1510915933:141416..141435Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:141208..141310TCONS_00049452-exon-scaffold_159-1510915933:141208..141310Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:140866..141009TCONS_00049452-exon-scaffold_159-1510915933:140866..141009Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:140606..140747TCONS_00049452-exon-scaffold_159-1510915933:140606..140747Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:140365..140475TCONS_00049452-exon-scaffold_159-1510915933:140365..140475Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:140075..140223TCONS_00049452-exon-scaffold_159-1510915933:140075..140223Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:139870..139972TCONS_00049452-exon-scaffold_159-1510915933:139870..139972Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:139668..139779TCONS_00049452-exon-scaffold_159-1510915933:139668..139779Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:139129..139547TCONS_00049452-exon-scaffold_159-1510915933:139129..139547Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:136733..136832TCONS_00049452-exon-scaffold_159-1510915933:136733..136832Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:135728..135861TCONS_00049452-exon-scaffold_159-1510915933:135728..135861Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1510915933:135402..135601TCONS_00049452-exon-scaffold_159-1510915933:135402..135601Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:144300..144425TCONS_00049452-exon-scaffold_159-1491911889:144300..144425Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:143172..143202TCONS_00049452-exon-scaffold_159-1491911889:143172..143202Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:142572..143047TCONS_00049452-exon-scaffold_159-1491911889:142572..143047Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:142272..142482TCONS_00049452-exon-scaffold_159-1491911889:142272..142482Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:142016..142155TCONS_00049452-exon-scaffold_159-1491911889:142016..142155Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:141848..141931TCONS_00049452-exon-scaffold_159-1491911889:141848..141931Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:141647..141762TCONS_00049452-exon-scaffold_159-1491911889:141647..141762Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:141416..141435TCONS_00049452-exon-scaffold_159-1491911889:141416..141435Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:141208..141310TCONS_00049452-exon-scaffold_159-1491911889:141208..141310Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:140866..141009TCONS_00049452-exon-scaffold_159-1491911889:140866..141009Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:140606..140747TCONS_00049452-exon-scaffold_159-1491911889:140606..140747Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:140365..140475TCONS_00049452-exon-scaffold_159-1491911889:140365..140475Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:140075..140223TCONS_00049452-exon-scaffold_159-1491911889:140075..140223Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:139870..139972TCONS_00049452-exon-scaffold_159-1491911889:139870..139972Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:139668..139779TCONS_00049452-exon-scaffold_159-1491911889:139668..139779Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:139129..139547TCONS_00049452-exon-scaffold_159-1491911889:139129..139547Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:136733..136832TCONS_00049452-exon-scaffold_159-1491911889:136733..136832Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:135728..135861TCONS_00049452-exon-scaffold_159-1491911889:135728..135861Clytia hemisphaericaexon
TCONS_00049452-exon-scaffold_159-1491911889:135402..135601TCONS_00049452-exon-scaffold_159-1491911889:135402..135601Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:135402..144425 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.38205e-06	2.06145e-05	0	2.03256e-05	0	0	0.21949	0.459925	0.641504	0.576455	7.37739e-05	0.340242	2.84282	3.12672	0	0	0	0	0	0	2.24932e-10	4.93314e-10	0	0	0.492366	2.20053	3.87426e-09	7.38662e-09	0	1.61507e-08
Blast
[Close]
BLAST of TCONS_00049452 vs. Swiss-Prot (Human)
Match: ATS14 (A disintegrin and metalloproteinase with thrombospondin motifs 14 OS=Homo sapiens GN=ADAMTS14 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 1.797e-43
Identity = 112/335 (33.43%), Postives = 172/335 (51.34%), Query Frame = 1 
Query:  937 HGEQKVMNYTIMLMNSVTRTFLHRSFGAPIYVSVVNIHLMKNKPSYYRIVTNRPEISVPGACRYSREVAQRNNSVDFH----LILTREDIGPAGFAAMYTMC-SRRSCALVKENGPDTSFVITHELAHALGIDHD-EDDGCGRENLSGGNIMVKKLYATSSNFRWSKCSAKMIWQNLKYFTCLKNKPKMLPTFKKSMDWLPGELMGIKDQCRSYHGSSALPCTPRNPLTACRYLWCRPNQSAPCQPVWWHA----PLEGSTCAKSKWCKRGRCVTKMKIKPV--NGGWSKYSEFTPPCNRKSTRWIVQHRNRSCTNPKPRLSGKKCQGSPNQYRI 1905
            HG++ V NY + LMN V   +   S G  I +++V + ++  + S   I    P  S+   CR++    +++ S   H    + LTR+D GP+G+A +  MC   RSCAL  E+G  ++FVI HE  H LG++HD + +GC  E  S G++M   + A    F WS+CS   + + L  + CL + P   P + +  + LPG    + +QCR   GS    C        C+ LWC    S P  P +       PL+G+ CA  KWC +G C+ K   +    +GGWS +++F   C+R S    V+ R+RSC NP P   G+ C G   +Y++
Sbjct:  275 HGKEHVQNYVLTLMNIVDEIYHDESLGVHINIALVRLIMVGYRQSLSLIERGNPSRSLEQVCRWAHSQQRQDPSHAEHHDHVVFLTRQDFGPSGYAPVTGMCHPLRSCALNHEDGFSSAFVIAHETGHVLGMEHDGQGNGCADET-SLGSVMAPLVQAAFHRFHWSRCSKLELSRYLPSYDCLLDDP-FDPAWPQPPE-LPGINYSMDEQCRFDFGSGYQTCLAFRTFEPCKQLWC----SHPDNPYFCKTKKGPPLDGTECAPGKWCFKGHCIWKSPEQTYGQDGGWSSWTKFG-SCSR-SCGGGVRSRSRSCNNPSPAYGGRLCLGPMFEYQV 600
The following BLAST results are available for this feature:
BLAST of TCONS_00049452 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATS141.797e-4333.43A disintegrin and metalloproteinase with thrombosp... [more]
back to top