TCONS_00049263 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049263
Unique NameTCONS_00049263
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3428

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049263 ID=TCONS_00049263|Name=TCONS_00049263|organism=Clytia hemisphaerica|type=transcript|length=3428bp
AACAATAGACGGGAAATCAGAACACTTCAACTGGATTTCGCACCTATTCT
TTGCTACCCCGAATAAGattttactgtctataaaaaaacacaaaagagAT
GTGTCGATGGTGGCTAATGGTGACTTTGGTCACTCTTTGCTTTTATATTG
CAAATGCAGGCAAGCAAAAGGAAAAAGCAGCATCAAGGGAGGGTGGTGAT
GTGATGAAACAACCAGAAGTACTGGCAGCTTTagagaaaatcaagaaaga
tGCTATCGCTCAAGTCACCTCAGCTTTCATCAAagcacaaaaacaaaaga
aaaagataactGCTGCTTCATCTTCATCATCNTCACCTCAGCTTTCATTA
AAGcgcaacaacaaaagaaaaagataactgctgcttcatcttcatcatcg
aAACGAAGTGAGATTCAAGGAAGTGGTGATTCTGCAGAATCAGGAGAATC
ATCGGGATCCGGCCAATCGGACGACGTCGAGACAGACGTCATGCAAATTC
ATCACGCTTCTGCAAAGAAAAACAATGTGTTGAAATCTAAAGACAAAGCC
AATGCTGACAAGCGAACCAATAGTAAAGAAGAAAGCGATAAAGCTAAACT
TGAAACAATGGCAGCTAAGATCGAATCCAAAACTGGACATACAGAAGCTA
TGACGGGAAAAATGGAAGCCAAGGCTGCTAATACTGAGTCGAAGACAGGA
GAGCAAGAAGCCAAAGCATCTGAAATTGAAACCAAGACAGCTCCAGTAGA
ATTAAAAGCTGTGAAATTAGAAACGAAAGCTGGCAAAATTGAATCTGTTA
AAGGCAATGGGGGTCAACAAGAGGCAAAAGATGCCAAAGTGCAAAACGCA
CAAAAGAAGGATGAGCAGAAAAAGCCTGAATTGAAGACAGAAGTAAAGAA
AATGAAGGAGGAACCCCCTAAGAAAGTGGAGGAAGCCCCTAAAAAGGGAG
AGGAAACCTATAAAAAAACTGAGGAAGTCAAAAAAGTTGAGGATGCTCCA
AAGAAGCAGGAAGAAGTAAAGAATTTGACAGAGGATGCTTCGAAACAAGT
GGATGTTGCCAAGAAATTGAAGGAGGAAGCACCAAAGAAACAAGAGGAAG
CCCCAAAAAAATTGGAGGATGCTAAAAAGGCTGCTACAGGTGATGCACCA
AAGAAAGAAGCCGAGACAAAGAAAATAGAAGGCGACGGTAAGAAGGCTTC
CAAGAAAGAAAAAGTGGCAGCTCCTTCCAGTAAGAAGCAGGAGAAAGGAG
ATAAGAGGCATCACCACCATCACCATCATCATCACCATCACCACCATCAT
CATGGGGATGCGGACAAGAAAAGCAAGGCTCCTGACAGCAAATCTAATAC
CCCTGACCCTAAGGTAGCCATGGCTGCAGCTCAGTACCTCCAACAACAAC
AGATGGCTGCTACCTACCAGAATGCTATGATGCAGGGAATGCTCACCCAA
AACCCTACTTTACAAACTTTGAATAGTTTTCAACAGAATCTTGCTTTCAT
GGGAGCTCCTGGAGCCCCTAATGGTGGACAGATGTTTCAGCAACAACCTG
GTACCCAAGGTGCAGGTGCTGTTCCTGCAGGTGGAACCGTGCCCTTCCAA
GATGGAAGTAACCCACAGTTGAATGCTGCCTTCTTGGAAAAACTCGACTG
GGACAGGATCAAGAATGATAAAAACACACAGGAAGATTTTGCTAAGAAAG
GTAACATACCTCTTccgaaattgaaagaaattttcgctAAAGGAGCTACA
CGATCAGATATTGAGAAGGAAACACTGGCTTTGTTAACTAAAACCATCAA
AACTCAAGATAATTTGGCAGAATTGTTCAAGTATGAAATGGGAGCAGTGG
TAGAGGAAAGCAAAGGGAATAGCTTCACGTCTCAAAGACATGATTTGACA
AGTGACAGTAAAAGTGTCCCTGGAGAATTGGAATTTGGACAACCAGAAAA
CGTTACCAGTCATGCTAAAGatttcaaaactCCAAAGGTCATACCAGACA
GCTGCTCAAAGTATTTGAAGATGTACACAAACGGTGAACTAACATTACCG
GACTACGTCAAACAGATCAAGATCTGCAAACAAAATGAAGTGATTGCCAA
ACAGATTGCTAGAACAACACCACAACAACGAGAAGCGGTGGCAACTATGA
AACGAATTCAAGAAGAAGCCTACAAATATGCTCTTCATACTATGAAAAAC
TATACCCTGACTGCTCGAGAGCAAGCCAATGCGGTCATGTCACAGTGGCG
CTCTACAAGTTTCAGTGGTAAAAACGCAACAGCCGGTGGCATCATTCCAG
ATGCAGTCAAGATGTTTATGacccaacaaaacaaaacaatcccACAAGAT
TCGAATCTTGATTTCGTCAGCAAAAAATCAACGGATCCTCTTGCTCTTTT
CAATTCCCAGCAACAAAAAGCTTTAAACCCGGTCAAGAAGACAGTGACAC
CTGCGGCACCAAAGATTCTATTAGCGACACCAAACGCTGGCGGAGCCGCT
TTACCTCTCACTAACTCCTTAGTTGAAGCCATCAAAGCTAGCAGTAAGGA
AGATCCCTTAGCTTCTATTTTCCCAGGGCAGATACCAAAATCAGTAGCAG
CTTTAGAATCCAAACCTACGGTCACCGATGATGCGATCGCAGCAGAAGAA
TTCATGGCGAGCCTTGCGAATCCCTTATTCAAACAGATGCCTGTTGACAA
ATCACTTGTTGCCGCCCTCAGAAGCATGGGCGGAGTTAGCATCAATACCC
CAAATCCAAAATACCAGCTTTTGCCTGGTCTACAAAAACGACGAAAACGC
TCCCTCAGTTCTGCAGACACACACAGacattttgtttctaaagttttgaa
aaagcaTCTGCGAAGGAGACGTGAAGCAGCCGGGATCACGAAACCAATGG
AACGCTCCAGCATGGAGACTCCTGTTCGTATGACGTCACAAGAAGGTCCA
AAGCTTTTGGATAAGATCAGAGATATGGGGCGTGTTATAGCTACCCCTTA
GATGAATATTTTGGATATATATTTTACGCTTTATTTGTATAAAGCTTAAT
TTTGGTGCGATAAAATTCAGCCGGGCATAATGTTTTTAGGTTTCAAAGTA
ATTGGCAGCTCTTTATAAAACACATTAGGTATAATGTGCTAATCTTGAAG
AGCTTTAGACAAACTGAAACAAAATcgaaaatattattgaaatctTGTGT
ATAATCAACACCGCAGTATGCTCATGTCAGAGCTCAAAATATCTGAATAG
CAGATTTAGGAGACCTTTTTTCAGCATTTGTAATGTTGTGTCATTGTCAT
TCATAAATTTAGACGAAATCTTTATTCAAGAGAAAATTTTATGTTGTAAA
TATATTGAACTGTGTTAGTTATTTTAAAgagaaatattaaaaacaaaaca
actttTAGATGTTTTTCAAGATGATTGA
Run BLAST on NCBI

transcript from alignment at scaffold_154:249033..262631-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049263 ID=TCONS_00049263|Name=TCONS_00049263|organism=Clytia hemisphaerica|type=transcript|length=13599bp|location=Sequence derived from alignment at scaffold_154:249033..262631- (Clytia hemisphaerica)
AACAATAGACGGGAAATCAGAACACTTCAACTGGATTTCGCACCTATTCT
TTGCTACCCCGAATAAGGTATTTTGCTTTTCTGTTCGTTTTTGTGTCCCT
TTTTTTATACCCTGGGTTATTATAAAGTAGTAGACGAAATTTTCTCCTTT
GAAACCTTAATTTCATAAATTTTATTGTTTAAACTGTTTAGTTTATCATT
TGATTAAGAACAAATGAGCTCTATTTGAGTATGAAACAGTTAATTTGGAA
CGAATTTTAGTTCGTTTTGGTTCGTTTTAGTTTGGTTGGTTGAAAAAAGT
ATTCTGCACTTTGTTCAAATTTTTCTTCATCGACCTGGACGAGCTGAGCT
TTCTTGCAGAATTTCTGTCTGAAAAAAAAGAGAATTAAAAAAATTGACAA
ACTTTTGACCAAGGTTTATAGTAAGAATTTAAGATTCAATTTTCTTTTTC
GTTTTTAGATTTTACTGTCTATAAAAAAACACAAAAGAGATGTGTCGATG
GTGGCTAATGGTGACTTTGGTCACTCTTTGCTTTTATATTGCAAATGCAG
GCAAGCAAAAGGAAAAAGGTAAGATTTTTGGTATTTATCATTAGACATTC
AAAATGTCCATGTTGAGGGGACTTTTTTTGGAATATCAGAGATCCTACCT
GGGTTTGTTTTTATTTTTGAGGTATTCATCTGGATTTTGATCATGAAATT
TCTTTGATACCCTAGACTTTATAGCTTTTTTTTCTGAACAGAAATTCTCT
TCGAAGTAGGGGCATTTGTTTTTCTGAAATAGCCGGCCTATTTGAGGGTT
TGCACTTATACTCATGTCGAACTAAAACCCCTATTATATACCGGGTGTCC
CAGAAAAAAGTTCCGCTCTTTGAAGTGAATTTTCTCCAGTTCTATGAATT
TCTAAACAATCAATCCTTTTGCATTGGAAAGAGGAAGGATAAAATTAAAT
TTTGAGGGGTCATTTATCAAATTTAGTCGACTGGATCAAAATGAATAAAA
ATTCTTTTTTTTGTAATTCCTCAAAAACGTTGAAAATCGACCTATCAAAT
TGTTATAGAAGCATAATTGCATGGAGCATGATTTTCATTGTTGAAGCAAT
AAAAACCTAATGGAAGTATCTTTTTANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNATCTGAAAAACTGAAAAATTTGATAATTCCAACCGATATTTGACTTCA
ATAGCTACACTGATGAAATCAGCGCTACTTTTGACTTTAGGGGTCCTTAA
GCCAAAATTTGAAGCTGAATTCCATAGAAAATAATTGGAAATGACCCAAT
TGAAACTTTTTAGTCCTTTAGAGAATTATTTCAAGCATTTTTTGTTTTCA
TGTCCACTTTAAACTCTTTATTCCTGCAAAAAAGTAATAATTAGGTTATA
AAATTTGATAGGTCGATTTTCAACGTTTTTGAGCCTTTTCAAAATGAAAT
TTTTATTCATTTCAGCATAATTTTTGATCTAGTTGACCAAATTTGATAAA
TGACCCCTCAAAATTTAAGTTTATCTTTCATCTTTCCTATGCAAAAGAAT
TGATCTTTTAAAAATTCATAGAACTCGAGAAAATTCACTTCAAAGAGCAG
AACTTTTTTCTGGGACACCCGGTATAAAAAACATGTGGCTCTCATAAGTT
ATCTCGGTAACTGGCTTTTCAAAACTGAAAAATACAATCTTCCCAACAAA
TATCAAACTTGTAAACAATACTGTTTTTTTTCCATGAAGAGCCTCTACCT
CCACTCTTTATATCTTCTTTTAAACCTTGAATCTTCTCTTATAAGACTTC
TAGAGACATTTAGTTTGGATATTATCTCATGTTCTCGGCAGTGCTGGGTG
CAGGTTTTATCAAATATATTGTTTAAATTTATTATTATTTTTTCATCAGC
AGCATCAAGGGAGGGTGGTGATGTGATGAAACAACCAGAAGTACTGGCAG
CTTTAGAGAAAATCAAGAAAGATGCTATCGCTCAAGTCACCTCAGCTTTC
ATCAAAGCACAAAAACAAAAGAAAAAGATAACTGCTGCTTCATCTTCATC
ATCNTCACCTCAGCTTTCATTAAAGCGCAACAACAAAAGAAAAAGATAAC
TGCTGCTTCATCTTCATCATCGAAACGAAGTGAGATTCAAGGAAGTGGTG
ATTCTGCAGAATCAGGTATGTTTAACCATTACAGAGTTTGTATTTGCATC
ATCACTTTTGAGGAAAGCGGAGTGACTGAAGCGGTTTAGAATAACCTGAC
CCGTAAAATAGAGGACGGTAAAAGTGCTCAGTCAGTTAGGATCTAAATCA
AAAGCTAACCGTCTCCGCCACGGAAAAAAATACATTAGCTCGGAGGAAAA
CTTCATGGATTTTGTGATATTACCCGTCAGGCACGATATTTTGAAGTATT
GAGAATTTAATGTTCACCCAAGTACTTATTTGCATATTTAACTGTCATTC
TTCTAAATCAGTTTTTGTTTCCATTGAAGGAGAATCATCGGGATCCGGCC
AATCGGACGACGTCGAGACAGACGTCATGCAAATTCATCACGCTTCTGCA
AAGAAAAACAATGTGTTGAAATCTAAAGACAAAGCCAATGCTGACAAGCG
AACCAATAGTAAAGAAGAAAGCGATAAAGCTAAACTTGAAACAATGGCAG
CTAAGGTACTTTGCTATATATTTATTCATTTTCCTAATTAATTACAATAT
CAAAATATCCTTCACGANACTACATATTTATTCATTTTCCTAATCAATTA
CAATATCAAAATATCCTTCACGAAAAATTTAAAACTGTTTCCTTTCAGAT
CGAATCCAAAACTGGACATACAGAAGCTATGACGGGAAAAATGGAAGCCA
AGGCTGCTAATACTGAGTCGAAGACAGGAGAGCAAGAAGCCAAAGCATCT
GAAATTGAAACCAAGACAGCTCCAGTAGAATTAAAAGCTGTGAAATTAGA
AACGAAAGCTGGCAAAATTGAATCTGTTAAAGGCAATGGGGGTCAACAAG
AGGCAAAAGATGCCAAAGTGCAAAACGCACAAAAGAAGGATGAGCAGAAA
AAGCCTGAATTGAAGACAGAAGTAAAGAAAATGAAGGAGGAACCCCCTAA
GAAAGTGGAGGAAGCCCCTAAAAAGGGAGAGGAAACCTATAAAAAAACTG
AGGAAGTCAAAAAAGTTGAGGATGCTCCAAAGAAGCAGGAAGAAGTAAAG
AATTTGACAGAGGATGCTTCGAAACAAGTGGATGTTGCCAAGAAATTGAA
GGAGGAAGCACCAAAGAAACAAGAGGAAGCCCCAAAAAAATTGGAGGATG
CTAAAAAGGCTGCTACAGGTGATGCACCAAAGAAAGAAGCCGAGACAAAG
AAAATAGAAGGCGACGGTAAGAAGGCTTCCAAGAAAGAAAAAGTGGCAGC
TCCTTCCAGTAAGAAGCAGGAGAAAGGAGATAAGAGGCATCACCACCATC
ACCATCATCATCACCATCACCACCATCATCATGGGGATGCGGACAAGAAA
AGCAAGGCTCCTGACAGCAAATCTAATACCCCTGACCCTAAGGTAGCCAT
GGCTGCAGCTCAGTACCTCCAACAACAACAGATGGCTGCTACCTACCAGA
ATGCTATGATGCAGGGAATGCTCACCCAAAACCCTACTTTACAAACTTTG
AATAGTTTTCAACAGAATCTTGCTTTCATGGGAGCTCCTGGAGCCCCTAA
TGGTGGACAGATGTTTCAGCAACAACCTGGTACCCAAGGTGCAGGTGCTG
TTCCTGCAGGTGGAACCGTGCCCTTCCAAGATGGAAGTAACCCACAGTTG
AATGCTGCCTTCTTGGAAAAACTCGACTGGGACAGGATCAAGAATGATAA
AAACACACAGGAAGATTTTGCTAAGAAAGGTAACATACCTCTTCCGAAAT
TGAAAGAAATTTTCGCTAAAGGAGCTACACGATCAGATATTGAGAAGGAA
ACACTGGCTTTGTTAACTAAAACCATCAAAACTCAAGATAATTTGGCAGA
ATTGTTCAAGTATGAAATGGGAGCAGTGGTAGAGGAAAGCAAAGGGAATA
GTGAGTATCTTTTTGTGTTTTTATCTGTGTACAAAGTTCTTTCGTCTCAG
AGTGTGTTTCCGTCTAATAGAGATACAAAAAAAGGGGCTTTTCCTTTCAA
CAAAGTTCTGCAAAAATTCTGCAAAAATTAAAGAATCTTGTCTAATTTTT
TGTTAAAAGTCCATTTCGATCTGAGACAATCTCTACAAACTACTGATGCT
TTCTTGTACATCGATTCTTTAATCTTTCTGAATCCAGTGGTTAGGGTTTC
ACCCGTAAACTTAGGTCCCAGCTGAAATTTGAATAGGCATTATTTGTTAT
CATTGTTTCAAAAATCACTTGTCAAAATGTTAGTACGTCAGCATCAAGGA
ACAACCAACATGCATAAAAATAATAAAAATAGAGTGGGATTTCCATTAAT
CGAACTTATTATTCAAATCTTTTTATAACCGGAACACAAAACTCCGTCCC
CGTCAAGGGGAGACTCTGGTAAATTAATAATCTCTACAATTTTAATTTCT
CTGCAATTCGAACACTTCAGGAGTCCAGTGCGAATTCGAATTTGCGAAAT
TCAACTATATTATCATTCTAATTGTGCTACAGTATCGGCTACATTATTTT
ATTTCATCAAATTATAAAGTTAAATTTGAATAATTACTACATTGTCAAGT
GGCAGTCGACGTCAAGACAATCCCCAACTCCCGGACTATAAAAATAATTT
TGGAATTTTAGTTCGACCTAAGGAATAGTTTTTACCATGAAATACATTTT
TCATTAATATTAAATTTGAATAATTACTACCTCGCAAAGTGGCAGTTGAC
TTTTACTCATTCCTTAGCTCCCGGACTATAAAGATAATCTTAGAATTTCT
GTTCGACCTAAACAATAGTTTTCACCATTTAATACATTTTTCTTCAGGCT
TCACGTCTCAAAGACATGATTTGACAAGTGACAGTAAAAGTGTCCCTGGA
GAATTGGAATTTGGACAACCAGAAAACGTTACCAGTCATGCTAAAGGTCA
GTGTCACCTCTCTTCATGATATTATGACGTAATGTTACATACGGAAGCAC
CCACAAATGACCGGGTATTAATTGTCATTAGTTTTGAATTTAAACAATGA
AACTAATGGCAAACGCCTGGGCTATTTTAAGAGCTTCCGTATGAAATATT
TCATCACGAATAATCATTCTTTCTTTAATTTTCTTGACTACTTTTAGTCT
CTAGTAATCTTGGATTCCTTAATTCAGACGGGGATCTGGATAAAGAAATG
GCGGATTAGGTTTTTTCAAAAACAGATAGTTCCAAGACAAAAATTCTTTG
TATGAGTCACTGAAGGCTAACCCAAAATTAATTTTAAATTGCTTTGGAGA
AATTCTTCAAGGCCATAGAGTAGGTCTTCTAAAAAACTGTGCGATATAGT
TTAATAATGATACGCTTTCTCTAATTTGCCCAAGATACCCGAAAATCGCA
AAATGTTTCTGCCCTCAGAGTACGATCTCTCTTATTTTGAAAAGGTAAAT
ATTAAAAATACAGTTGTGTATGAGATGTTTTTTTTTTTGAAAACGACGAA
ACGACGTATTTTGAAAATATATTGATATCTCACACAAGATTAACTGTGAA
ACCTTTTCGTCGTTTTTGTCATTTTTAGATTTCAAAACTCCAAAGGTCAT
ACCAGACAGCTGCTCAAAGTATTTGAAGATGTACACAAACGGTGAACTAA
CATTACCGGACTACGTCAAACAGATCAAGATCTGCAAACAAAATGAAGTG
ATTGCCAAACAGATTGCTAGAACAAGTATGTCTGTGTTTATTTTGCACTT
TCTTTTTTTCACACTGTAGTACTAGATATTTACAGTCGATATGTAATTTT
GATATTCGTAATTTCTTTTCCAACAAACTCATCCCGGAGAATCACGGTTA
ATGAGGGTGTTTTTGTAAATAAAATGATATACGCAAATCAAGAATTCTTC
AGCCGTGTAATAATTCTCTTAATGGAAACATCCCGCAAAAACGAAAGTCG
CCCTATTTTCAAGTGAAATATTGAAGTTTGGTTCTAGCGCTTTCTGTTTT
TGTTCTAAAATATAACCATTAAAAGATATTTGTCAAAATCAAAATGATCT
TTTCCATAAAATATTCGTTTTAGATTGAGGCTCTCTAATTTGACGATCTA
GTATTATGAACACTCCATTATTCGATCATGTTGAAAGTCACCGCAAACAA
AGAACCATTATATACGCTTTACCATTCTATATATGCTCCCTTATTCGATG
AAAGTAAAATTTATCTTGAAAATCGACTTTGAGAGTAGCGTCAATTGTAG
ATCTTGAAAATGGATTTTTACTTATGATTCTAGCACCACAACAACGAGAA
GCGGTGGCAACTATGAAACGAATTCAAGAAGAAGCCTACAAATATGCTCT
TCATACTATGAAAAACTATACCCTGACTGCTCGAGAGGTATTATAATTCA
ACCCTTTAAGNGACTTACGCAAATCAAGAATTCTTCAGCCGTGTAATAAT
TCTCTTAATGGAAACATCCCGCAAAAACGAAAGTCGCCCTATTTTCAAGT
GAAATATTGAAGTTTGGTTCTAGCGCTTTCTGTTTTTGTTCTAAAATATA
ACCATTAAAAGATATTTGTCAAAATCAAAATGATCTTTTCCATAAAATAT
CCGTTTTAGATTGAGGCTCTCTAATTTGACGATCTAGTATTATGAACACT
CCATTATTCGATTGTATTGAAAGTCACCGCAAACAAAGAACCATTATATA
CGCTTTACCGTTCTATATATGCTCCCTTATTCGATGAAAGTAAAATTTAT
CTTGAAAATCGACTTTGAGAGTAGCGTCAATTGTAGATCTTGAAAATGGA
TTCTTACTTATAATTCTAGCACCACAACAACGAGAAGCGGTGGCAACTAT
GAAGCGAATTCAAGAAGAAGCCTACAAATATGCTCTTCATACTATGAAAA
ACTATACCCTGACTGCTCGAGAGGTATTATAATTCAACCCTTTAAGTATA
ATTTAACCCCTTTAACAACCCTCCCTTCGTCGGTGACTTAAATTCTTTTT
GGACCTACCCCGGTGGGGTGGAGGTCCTATAAATTAACCTGTGTTCGTTC
GTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGT
TCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTC
GTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGT
CCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCC
GTTCGTCTGTTACCAACTTTTCTCAGGATTGAATCATAGGAATCTTTTGA
TTTTTGGTCCAAGGGTGCAAAATGGTGGTGGCCAAAATGTGACGGAGCCC
GATTTTCGAAAAAAAAATTTCTTGGGCAAATTTGGGCCAAAAAACGGCTA
AAAAACGGGTTTTTTGGACTTTGTGAAAAATTGGATCGTTAATTTTTTCT
GATTTTTTGCATGAAAGTAGGGTACCATCATATAAAGTCAGATCGGTGTC
AAAATCAAAAGGTCAGGTCGTCGGGTCGAACCGTCGGGTCGTAATATCAA
AGGGTCGGGTCGTAATATCAAAAGGTCAGGTCGTCGGGTCGAACCGTCGG
GTCGTAATATCAAAGGGTCGGGTCGTAATATCAAAGGGTCGGGTCGTAAT
GTCAAAAGGTCAGGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAACGG
TCGGATCGAAGCGTCGAGCCAGACCGCCGGGATCCAATGCCGGTTTATCG
GGATATTTAACATCGTTCTGTAAAATATCATTTTTTAAAGGGACAATCCA
ATACTAAGCAAATCAAAATATTATGGTCACGTGTCTGGAATTTGATTGGT
CGAGCGCGATAAAAGTTTACAATTTGATTGGTCGAACGGGATTCTCACTT
TCGTTTTCGTAATCTAAACAAACCGAAAAATACTTTGTGAATGAAAAATG
AAAAATCTTTCGTGTAATTTCTTCTGTCTTGTATCATACTTATACGAAGG
AAATTTTCTGTTTTGCTATGCCAAAATTGATTCACAAATGTAAATACTAC
ACAAGAGTTTTTCTATACAGAAAGAGATTGTGAGATGAGAAGATATAAAA
AGTTCTTTTTTGTTTTCCTGTGTTCTTTGTGTTTCATCAAGAGCAGATGA
ACAAAATAACAAATAGTAAATAATGCATAAAACATTTTTTGAAAAAAATA
NGTTTTCCTGTGTTCTTTGTGTTTCATCAAGAGCAGATGAACAAAATAAC
AAATGGTAAATAAAGCATAAAACATTTTTTGAAAAAAATAACATACATTA
CAAAATTCCTGTATAAACATTTGGAAATACTTTATGGCTTCACTTTTAAC
AAGAGTGATGCAAAAGTATTTGAATAATAATATGACCTCCTCTTTGAAGT
TGCCTTCCAAAATATTTCTTTCCATTCAAAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATTCCACGT
TCACTCAAGTTAACAACGTAAATAAAATGTAAACAGTTCTTCTTACAGCA
GCATATCCATAATACCACTGTAAAAAATGCAGCTATGTCCATCAATCACG
AAACAAACTGGTACATGAAAAATATGTTCAACTGTTCCCAAATCATAGCA
TGTACGAGGACTTTAAAAAAGGGTGCAGAGATATGTAGCTTTAGAGTCGA
ACCATGCCAGAAGCACAAGAAGACTAAGTCCCTTGATCGATGGTTTGATC
TTAATTTTCAATGATAGTCACAGGATTTTAAATTTAATCAAATCAATGTG
TCCTACTGCTACTTCCTCAACATTATTATTTCATAAAATTCCAAATCAGT
ACAATATGATGCTCAGAACCTCAAAAGCTCAGAGTTTTTCGTTCATCGTA
GAGTTACTTTTCACTTCATTTTATTTATTTGGTTCATGCAAAATCTCATG
ATACAGTGCTTTTATCGAGAAAATAATATACGCGTTCCATGATTCTATCG
AAGTATTCTGAAGTTATGTAGACTACAGTCTCCAGAGTTGATTTTTCAAG
TCATTGGATGAACAAAAATGTCCCATATTTTGAAGTACGAACCATGAAAA
TCTTCTTTGAAAAAGGCTTTCTTGTCTTGATGAGTTTCATACACTTCTCA
GATCCATATATGCACACTTTCAAGAGATGAAGTCTTTCTTGTCTCTTGTT
GATGAGTTACATTTCACTTCTCAGATCCATATGCACACTTTCGAGAGAAA
ATAGAAATCTCTTTCTCCTCTTGAGTGTTCAAAATTGACTACATTGTTAT
TTAACTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNACTGAAAGAAGCAAGAGAAGAGATAGTTCTGTATAAATTGGTTAG
CAAAAGAATTCAGCCTTGTTGGAAATATCTTCTTGTATCTTCAGCATCAT
AGAAATATGAACATTGAAACTTTGCACAAAGATAGTTGAATAAGAACACT
TCATGATTTTGATAATATAAACATGTTATAGACACCTGAAAGTATAATTA
TTTAAATCAGTGGTAAAAATATAAACATTTCACTGATCGAATTATTTCGC
TTCCATTTTGCTTTCACTTTTGTTCTTAGTATTATAGTATTTAGTTTATA
GTATTCTGCGGAACGAGATTTTAACTAATCTGATAAGCCCGATAAACCCG
ATAATCCGGCATTGTATCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCCCGGCAGTCTGGTTCGACGCTACGACCCGGCCG
TTCGACATCACGACCCGACCTTTTGATATTACGACCTGACCCTTCGATAT
TACGACCTGACCTTTTGACATCACGACCCGACGGTTCGACCCGATGACCT
GACCTTTTGAGATTACGACCCGGCGGTTCGACCCGACGATCTGACAGTTT
GACATTACGACCCGACGGTTCGACCCGACGATCTGACAGTTTGACANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCGCATGTTTATCTATAAGAATCACTATT
AATAAGCATATATCAATGTTCTTAGTCAAATTACTCAATTTTTTCATGAG
ATAGATGTTTTTTTTTGCTCATTGGGGCTTACTTTTGATAAATATTAGTG
TTTCGACATGAAATTTTGGCTGCTTGGCGTTTTTTTATAGAAAAACTGGC
CAAATTCGATATTTTTTTATAAGCACATTATCAATTACTTAGGTATTGCC
TTTTTTCGAGATTGGCTCTTTCATTCTTTATGAATTTTTGCACAAAGATA
CATAACTATAAGCCCTCGAATGTGACGCAGCCCGATTTCGAAAAAAAATG
TTTTTGGGCAAATTTGGGCCAAAAAACAGCTAAAAAACGGGTTTTTTGGA
CTTTGTGAAATATTGGATCATTGTTTTTTTCTGATTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCGCATCTCTATCTATAAGAATCACTATTAATAAGCATACATCAA
TGTTCTTAGCCAAATTACTCAATTTTTTTGATGAGATAGATGTTTTTTTT
GCTCACGAAGTCTTGAATATGAAAGAATATTTCAAGAGCATGAAATTTTG
TTTTCTAAACGTTTTTTTTATAAGAAACAAACGACTAATTTTGATAGATC
GTCACTGTTTATGTTCTGAATGATTGTTTAATGGTCACGTCACGTAGATA
TCAATTATATATGTGTTAATACATAACCAGGTAGGTCCATAAAAGTATCA
CTTGTTCTTTGACTATTTTGGGTGACCTACACAATTGGAATTAGAGAAGA
GAGAAGGTTTTCAGGGCCACTTTTGCAGCAAAATTTGACAACAACCCCCC
CTTGTTAGTTACTTGAAGTCTTTGACACTTTTGGGATTCTATACAATTGT
AATTAGAGAAGGGAGAAAGCTTTAAAGGCCACTTTTGCAGCATGGATATT
GTCCAGAATACCCCCATTCTTGTCGGTGACTTGAGGCCTAATTAAAGAAG
GTTGAAGGTTATTTTGGTCACTCTTGTAGCATGGATATTCCAAAAGGGAT
GTTTTGAGCATACCTGGGAAAAAACTTTTTATATAGACTTCTCCTGAAGT
TGGGCGCCTGATCTATAATTATGTCAAATTCCACGCTAATAACAACAGCA
CTTTGACAACAGTCTTTGGCGAGATTATTGCATACTCGGGCGAGAAATCG
TGTCAAACTCCTTCACGTTTGTTTTCTTTCCTTATCCCTTAGCAAGCCAA
TGCGGTCATGTCACAGTGGCGCTCTACAAGTTTCAGTGGTAAAAACGCAA
CAGCCGGTGGCATCATTCCAGATGCAGTCAAGATGTTTATGACCCAACAA
AACAAAACAATCCCACAAGATTCGAATCTTGATTTCGTCAGCAAAAAATC
AACGGATCCTCTTGCTCTTTTCAATTCCCAGCAACAAAAAGCTTTAAACC
CGGTCAAGAAGACAGTGACACCTGCGGCACCAAAGATTCTATTAGCGACA
CCAAACGCTGGCGGAGCCGCTTTACCTCTCACTAACTCCTTAGTTGAAGC
CATCAAAGCTAGCAGTAAGGAAGATCCCTTAGCTTCTATTTTCCCAGGGC
AGATACCAAAATCAGTAGCAGCTTTAGAATCCAAACCTACGGTCACCGAT
GATGCGATCGCAGCAGAAGAATTCATGGCGAGCCTTGCGAATCCCTTATT
CAAACAGATGCCTGTTGACAAATCACTTGTTGCCGCCCTCAGAAGCATGG
GCGGAGTTAGCATCAATACCCCAAATCCAAAATACCAGCTTTTGCCTGGT
CTACAAAAACGACGAAAACGCTCCCTCAGTTCTGCAGACACACACAGACA
TTTTGTTTCTAAAGTTTTGAAAAAGCATCTGCGAAGGAGACGTGAAGCAG
CCGGGATCACGAAACCAATGGAACGCTCCAGCATGGAGACTCCTGTTCGT
ATGACGTCACAAGAAGGTCCAAAGCTTTTGGATAAGATCAGAGATATGGG
GCGTGTTATAGCTACCCCTTAGATGAATATTTTGGATATATATTTTACGC
TTTATTTGTATAAAGCTTAATTTTGGTGCGATAAAATTCAGCCGGGCATA
ATGTTTTTAGGTTTCAAAGTAATTGGCAGCTCTTTATAAAACACATTAGG
TATAATGTGCTAATCTTGAAGAGCTTTAGACAAACTGAAACAAAATCGAA
AATATTATTGAAATCTTGTGTATAATCAACACCGCAGTATGCTCATGTCA
GAGCTCAAAATATCTGAATAGCAGATTTAGGAGACCTTTTTTCAGCATTT
GTAATGTTGTGTCATTGTCATTCATAAATTTAGACGAAATCTTTATTCAA
GAGAAAATTTTATGTTGTAAATATATTGAACTGTGTTAGTTATTTTAAAG
AGAAATATTAAAAACAAAACAACTTTTAGATGTTTTTCAAGATGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031272XLOC_031272Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049263-exon-scaffold_154-1575043694:262565..262631TCONS_00049263-exon-scaffold_154-1575043694:262565..262631Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1575043694:262064..262173TCONS_00049263-exon-scaffold_154-1575043694:262064..262173Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1575043694:260317..260582TCONS_00049263-exon-scaffold_154-1575043694:260317..260582Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1575043694:259827..260002TCONS_00049263-exon-scaffold_154-1575043694:259827..260002Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1575043694:258432..259683TCONS_00049263-exon-scaffold_154-1575043694:258432..259683Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1575043694:257436..257534TCONS_00049263-exon-scaffold_154-1575043694:257436..257534Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1575043694:256657..256803TCONS_00049263-exon-scaffold_154-1575043694:256657..256803Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1575043694:255995..256098TCONS_00049263-exon-scaffold_154-1575043694:255995..256098Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1575043694:249033..250239TCONS_00049263-exon-scaffold_154-1575043694:249033..250239Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1510915933:262565..262631TCONS_00049263-exon-scaffold_154-1510915933:262565..262631Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1510915933:262064..262173TCONS_00049263-exon-scaffold_154-1510915933:262064..262173Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1510915933:260317..260582TCONS_00049263-exon-scaffold_154-1510915933:260317..260582Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1510915933:259827..260002TCONS_00049263-exon-scaffold_154-1510915933:259827..260002Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1510915933:258432..259683TCONS_00049263-exon-scaffold_154-1510915933:258432..259683Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1510915933:257436..257534TCONS_00049263-exon-scaffold_154-1510915933:257436..257534Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1510915933:256657..256803TCONS_00049263-exon-scaffold_154-1510915933:256657..256803Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1510915933:255995..256098TCONS_00049263-exon-scaffold_154-1510915933:255995..256098Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1510915933:249033..250239TCONS_00049263-exon-scaffold_154-1510915933:249033..250239Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1491911889:262565..262631TCONS_00049263-exon-scaffold_154-1491911889:262565..262631Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1491911889:262064..262173TCONS_00049263-exon-scaffold_154-1491911889:262064..262173Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1491911889:260317..260582TCONS_00049263-exon-scaffold_154-1491911889:260317..260582Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1491911889:259827..260002TCONS_00049263-exon-scaffold_154-1491911889:259827..260002Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1491911889:258432..259683TCONS_00049263-exon-scaffold_154-1491911889:258432..259683Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1491911889:257436..257534TCONS_00049263-exon-scaffold_154-1491911889:257436..257534Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1491911889:256657..256803TCONS_00049263-exon-scaffold_154-1491911889:256657..256803Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1491911889:255995..256098TCONS_00049263-exon-scaffold_154-1491911889:255995..256098Clytia hemisphaericaexon
TCONS_00049263-exon-scaffold_154-1491911889:249033..250239TCONS_00049263-exon-scaffold_154-1491911889:249033..250239Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:249033..262631 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.000208666	0.000112684	3.12929	6.09897	0.00464178	1.78705	0.651292	0.303834	2.33742	3.02421	2.11351	4.13681	4.4646	0.0160033	8.63453e-05	5.07653e-05	0.00132093	0.316859	0.418467	0.0025363	6.09925	11.9465	0	0.00160939	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049263 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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