TCONS_00049262 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049262
Unique NameTCONS_00049262
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3411

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049262 ID=TCONS_00049262|Name=TCONS_00049262|organism=Clytia hemisphaerica|type=transcript|length=3411bp
CAGAACACTTCAACTGGATTTCGCACCTATTCTTTGCTACCCCGAATAAG
attttactgtctataaaaaaacacaaaagagATGTGTCGATGGTGGCTAA
TGGTGACTTTGGTCACTCTTTGCTTTTATATTGCAAATGCAGGCAAGCAA
AAGGAAAAAGCAGCATCAAGGGAGGGTGGTGATGTGATGAAACAACCAGA
AGTACTGGCAGCTTTagagaaaatcaagaaagatGCTATCGCTCAAGTCA
CCTCAGCTTTCATCAAagcacaaaaacaaaagaaaaagataactGCTGCT
TCATCTTCATCATCNTCACCTCAGCTTTCATTAAAGcgcaacaacaaaag
aaaaagataactgctgcttcatcttcatcatcgaAACGAAGTGAGATTCA
AGGAAGTGGTGATTCTGCAGAATCAGGAGAATCATCGGGATCCGGCCAAT
CGGACGACGTCGAGACAGACGTCATGCAAATTCATCACGCTTCTGCAAAG
AAAAACAATGTGTTGAAATCTAAAGACAAAGCCAATGCTGACAAGCGAAC
CAATAGTAAAGAAGAAAGCGATAAAGCTAAACTTGAAACAATGGCAGCTA
AGATCGAATCCAAAACTGGACATACAGAAGCTATGACGGGAAAAATGGAA
GCCAAGGCTGCTAATACTGAGTCGAAGACAGGAGAGCAAGAAGCCAAAGC
ATCTGAAATTGAAACCAAGACAGCTCCAGTAGAATTAAAAGCTGTGAAAT
TAGAAACGAAAGCTGGCAAAATTGAATCTGTTAAAGGCAATGGGGGTCAA
CAAGAGGCAAAAGATGCCAAAGTGCAAAACGCACAAAAGAAGGATGAGCA
GAAAAAGCCTGAATTGAAGACAGAAGTAAAGAAAATGAAGGAGGAACCCC
CTAAGAAAGTGGAGGAAGCCCCTAAAAAGGGAGAGGAAACCTATAAAAAA
ACTGAGGAAGTCAAAAAAGTTGAGGATGCTCCAAAGAAGCAGGAAGAAGT
AAAGAATTTGACAGAGGATGCTTCGAAACAAGTGGATGTTGCCAAGAAAT
TGAAGGAGGAAGCACCAAAGAAACAAGAGGAAGCCCCAAAAAAATTGGAG
GATGCTAAAAAGGCTGCTACAGGTGATGCACCAAAGAAAGAAGCCGAGAC
AAAGAAAATAGAAGGCGACGGTAAGAAGGCTTCCAAGAAAGAAAAAGTGG
CAGCTCCTTCCAGTAAGAAGCAGGAGAAAGGAGATAAGAGGCATCACCAC
CATCACCATCATCATCACCATCACCACCATCATCATGGGGATGCGGACAA
GAAAAGCAAGGCTCCTGACAGCAAATCTAATACCCCTGACCCTAAGGTAG
CCATGGCTGCAGCTCAGTACCTCCAACAACAACAGATGGCTGCTACCTAC
CAGAATGCTATGATGCAGGGAATGCTCACCCAAAACCCTACTTTACAAAC
TTTGAATAGTTTTCAACAGAATCTTGCTTTCATGGGAGCTCCTGGAGCCC
CTAATGGTGGACAGATGTTTCAGCAACAACCTGGTACCCAAGGTGCAGGT
GCTGTTCCTGCAGGTGGAACCGTGCCCTTCCAAGATGGAAGTAACCCACA
GTTGAATGCTGCCTTCTTGGAAAAACTCGACTGGGACAGGATCAAGAATG
ATAAAAACACACAGGAAGATTTTGCTAAGAAAGGTAACATACCTCTTccg
aaattgaaagaaattttcgctAAAGGAGCTACACGATCAGATATTGAGAA
GGAAACACTGGCTTTGTTAACTAAAACCATCAAAACTCAAGATAATTTGG
CAGAATTGTTCAAGTATGAAATGGGAGCAGTGGTAGAGGAAAGCAAAGGG
AATAGCTTCACGTCTCAAAGACATGATTTGACAAGTGACAGTAAAAGTGT
CCCTGGAGAATTGGAATTTGGACAACCAGAAAACGTTACCAGTCATGCTA
AAGatttcaaaactCCAAAGGTCATACCAGACAGCTGCTCAAAGTATTTG
AAGATGTACACAAACGGTGAACTAACATTACCGGACTACGTCAAACAGAT
CAAGATCTGCAAACAAAATGAAGTGATTGCCAAACAGATTGCTAGAACAA
CACCACAACAACGAGAAGCGGTGGCAACTATGAAGCGAATTCAAGAAGAA
GCCTACAAATATGCTCTTCATACTATGAAAAACTATACCCTGACTGCTCG
AGAGCAAGCCAATGCGGTCATGTCACAGTGGCGCTCTACAAGTTTCAGTG
GTAAAAACGCAACAGCCGGTGGCATCATTCCAGATGCAGTCAAGATGTTT
ATGacccaacaaaacaaaacaatcccACAAGATTCGAATCTTGATTTCGT
CAGCAAAAAATCAACGGATCCTCTTGCTCTTTTCAATTCCCAGCAACAAA
AAGCTTTAAACCCGGTCAAGAAGACAGTGACACCTGCGGCACCAAAGATT
CTATTAGCGACACCAAACGCTGGCGGAGCCGCTTTACCTCTCACTAACTC
CTTAGTTGAAGCCATCAAAGCTAGCAGTAAGGAAGATCCCTTAGCTTCTA
TTTTCCCAGGGCAGATACCAAAATCAGTAGCAGCTTTAGAATCCAAACCT
ACGGTCACCGATGATGCGATCGCAGCAGAAGAATTCATGGCGAGCCTTGC
GAATCCCTTATTCAAACAGATGCCTGTTGACAAATCACTTGTTGCCGCCC
TCAGAAGCATGGGCGGAGTTAGCATCAATACCCCAAATCCAAAATACCAG
CTTTTGCCTGGTCTACAAAAACGACGAAAACGCTCCCTCAGTTCTGCAGA
CACACACAGacattttgtttctaaagttttgaaaaagcaTCTGCGAAGGA
GACGTGAAGCAGCCGGGATCACGAAACCAATGGAACGCTCCAGCATGGAG
ACTCCTGTTCGTATGACGTCACAAGAAGGTCCAAAGCTTTTGGATAAGAT
CAGAGATATGGGGCGTGTTATAGCTACCCCTTAGATGAATATTTTGGATA
TATATTTTACGCTTTATTTGTATAAAGCTTAATTTTGGTGCGATAAAATT
CAGCCGGGCATAATGTTTTTAGGTTTCAAAGTAATTGGCAGCTCTTTATA
AAACACATTAGGTATAATGTGCTAATCTTGAAGAGCTTTAGACAAACTGA
AACAAAATcgaaaatattattgaaatctTGTGTATAATCAACACCGCAGT
ATGCTCATGTCAGAGCTCAAAATATCTGAATAGCAGATTTAGGAGACCTT
TTTTCAGCATTTGTAATGTTGTGTCATTGTCATTCATAAATTTAGACGAA
ATCTTTATTCAAGAGAAAATTTTATGTTGTAAATATATTGAACTGTGTTA
GTTATTTTAAAgagaaatattaaaaacaaaacaactttTAGATGTTTTTC
AAGATGATTGA
Run BLAST on NCBI

transcript from alignment at scaffold_154:249033..262614-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049262 ID=TCONS_00049262|Name=TCONS_00049262|organism=Clytia hemisphaerica|type=transcript|length=13582bp|location=Sequence derived from alignment at scaffold_154:249033..262614- (Clytia hemisphaerica)
CAGAACACTTCAACTGGATTTCGCACCTATTCTTTGCTACCCCGAATAAG
GTATTTTGCTTTTCTGTTCGTTTTTGTGTCCCTTTTTTTATACCCTGGGT
TATTATAAAGTAGTAGACGAAATTTTCTCCTTTGAAACCTTAATTTCATA
AATTTTATTGTTTAAACTGTTTAGTTTATCATTTGATTAAGAACAAATGA
GCTCTATTTGAGTATGAAACAGTTAATTTGGAACGAATTTTAGTTCGTTT
TGGTTCGTTTTAGTTTGGTTGGTTGAAAAAAGTATTCTGCACTTTGTTCA
AATTTTTCTTCATCGACCTGGACGAGCTGAGCTTTCTTGCAGAATTTCTG
TCTGAAAAAAAAGAGAATTAAAAAAATTGACAAACTTTTGACCAAGGTTT
ATAGTAAGAATTTAAGATTCAATTTTCTTTTTCGTTTTTAGATTTTACTG
TCTATAAAAAAACACAAAAGAGATGTGTCGATGGTGGCTAATGGTGACTT
TGGTCACTCTTTGCTTTTATATTGCAAATGCAGGCAAGCAAAAGGAAAAA
GGTAAGATTTTTGGTATTTATCATTAGACATTCAAAATGTCCATGTTGAG
GGGACTTTTTTTGGAATATCAGAGATCCTACCTGGGTTTGTTTTTATTTT
TGAGGTATTCATCTGGATTTTGATCATGAAATTTCTTTGATACCCTAGAC
TTTATAGCTTTTTTTTCTGAACAGAAATTCTCTTCGAAGTAGGGGCATTT
GTTTTTCTGAAATAGCCGGCCTATTTGAGGGTTTGCACTTATACTCATGT
CGAACTAAAACCCCTATTATATACCGGGTGTCCCAGAAAAAAGTTCCGCT
CTTTGAAGTGAATTTTCTCCAGTTCTATGAATTTCTAAACAATCAATCCT
TTTGCATTGGAAAGAGGAAGGATAAAATTAAATTTTGAGGGGTCATTTAT
CAAATTTAGTCGACTGGATCAAAATGAATAAAAATTCTTTTTTTTGTAAT
TCCTCAAAAACGTTGAAAATCGACCTATCAAATTGTTATAGAAGCATAAT
TGCATGGAGCATGATTTTCATTGTTGAAGCAATAAAAACCTAATGGAAGT
ATCTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTGAAAAACTGAA
AAATTTGATAATTCCAACCGATATTTGACTTCAATAGCTACACTGATGAA
ATCAGCGCTACTTTTGACTTTAGGGGTCCTTAAGCCAAAATTTGAAGCTG
AATTCCATAGAAAATAATTGGAAATGACCCAATTGAAACTTTTTAGTCCT
TTAGAGAATTATTTCAAGCATTTTTTGTTTTCATGTCCACTTTAAACTCT
TTATTCCTGCAAAAAAGTAATAATTAGGTTATAAAATTTGATAGGTCGAT
TTTCAACGTTTTTGAGCCTTTTCAAAATGAAATTTTTATTCATTTCAGCA
TAATTTTTGATCTAGTTGACCAAATTTGATAAATGACCCCTCAAAATTTA
AGTTTATCTTTCATCTTTCCTATGCAAAAGAATTGATCTTTTAAAAATTC
ATAGAACTCGAGAAAATTCACTTCAAAGAGCAGAACTTTTTTCTGGGACA
CCCGGTATAAAAAACATGTGGCTCTCATAAGTTATCTCGGTAACTGGCTT
TTCAAAACTGAAAAATACAATCTTCCCAACAAATATCAAACTTGTAAACA
ATACTGTTTTTTTTCCATGAAGAGCCTCTACCTCCACTCTTTATATCTTC
TTTTAAACCTTGAATCTTCTCTTATAAGACTTCTAGAGACATTTAGTTTG
GATATTATCTCATGTTCTCGGCAGTGCTGGGTGCAGGTTTTATCAAATAT
ATTGTTTAAATTTATTATTATTTTTTCATCAGCAGCATCAAGGGAGGGTG
GTGATGTGATGAAACAACCAGAAGTACTGGCAGCTTTAGAGAAAATCAAG
AAAGATGCTATCGCTCAAGTCACCTCAGCTTTCATCAAAGCACAAAAACA
AAAGAAAAAGATAACTGCTGCTTCATCTTCATCATCNTCACCTCAGCTTT
CATTAAAGCGCAACAACAAAAGAAAAAGATAACTGCTGCTTCATCTTCAT
CATCGAAACGAAGTGAGATTCAAGGAAGTGGTGATTCTGCAGAATCAGGT
ATGTTTAACCATTACAGAGTTTGTATTTGCATCATCACTTTTGAGGAAAG
CGGAGTGACTGAAGCGGTTTAGAATAACCTGACCCGTAAAATAGAGGACG
GTAAAAGTGCTCAGTCAGTTAGGATCTAAATCAAAAGCTAACCGTCTCCG
CCACGGAAAAAAATACATTAGCTCGGAGGAAAACTTCATGGATTTTGTGA
TATTACCCGTCAGGCACGATATTTTGAAGTATTGAGAATTTAATGTTCAC
CCAAGTACTTATTTGCATATTTAACTGTCATTCTTCTAAATCAGTTTTTG
TTTCCATTGAAGGAGAATCATCGGGATCCGGCCAATCGGACGACGTCGAG
ACAGACGTCATGCAAATTCATCACGCTTCTGCAAAGAAAAACAATGTGTT
GAAATCTAAAGACAAAGCCAATGCTGACAAGCGAACCAATAGTAAAGAAG
AAAGCGATAAAGCTAAACTTGAAACAATGGCAGCTAAGGTACTTTGCTAT
ATATTTATTCATTTTCCTAATTAATTACAATATCAAAATATCCTTCACGA
NACTACATATTTATTCATTTTCCTAATCAATTACAATATCAAAATATCCT
TCACGAAAAATTTAAAACTGTTTCCTTTCAGATCGAATCCAAAACTGGAC
ATACAGAAGCTATGACGGGAAAAATGGAAGCCAAGGCTGCTAATACTGAG
TCGAAGACAGGAGAGCAAGAAGCCAAAGCATCTGAAATTGAAACCAAGAC
AGCTCCAGTAGAATTAAAAGCTGTGAAATTAGAAACGAAAGCTGGCAAAA
TTGAATCTGTTAAAGGCAATGGGGGTCAACAAGAGGCAAAAGATGCCAAA
GTGCAAAACGCACAAAAGAAGGATGAGCAGAAAAAGCCTGAATTGAAGAC
AGAAGTAAAGAAAATGAAGGAGGAACCCCCTAAGAAAGTGGAGGAAGCCC
CTAAAAAGGGAGAGGAAACCTATAAAAAAACTGAGGAAGTCAAAAAAGTT
GAGGATGCTCCAAAGAAGCAGGAAGAAGTAAAGAATTTGACAGAGGATGC
TTCGAAACAAGTGGATGTTGCCAAGAAATTGAAGGAGGAAGCACCAAAGA
AACAAGAGGAAGCCCCAAAAAAATTGGAGGATGCTAAAAAGGCTGCTACA
GGTGATGCACCAAAGAAAGAAGCCGAGACAAAGAAAATAGAAGGCGACGG
TAAGAAGGCTTCCAAGAAAGAAAAAGTGGCAGCTCCTTCCAGTAAGAAGC
AGGAGAAAGGAGATAAGAGGCATCACCACCATCACCATCATCATCACCAT
CACCACCATCATCATGGGGATGCGGACAAGAAAAGCAAGGCTCCTGACAG
CAAATCTAATACCCCTGACCCTAAGGTAGCCATGGCTGCAGCTCAGTACC
TCCAACAACAACAGATGGCTGCTACCTACCAGAATGCTATGATGCAGGGA
ATGCTCACCCAAAACCCTACTTTACAAACTTTGAATAGTTTTCAACAGAA
TCTTGCTTTCATGGGAGCTCCTGGAGCCCCTAATGGTGGACAGATGTTTC
AGCAACAACCTGGTACCCAAGGTGCAGGTGCTGTTCCTGCAGGTGGAACC
GTGCCCTTCCAAGATGGAAGTAACCCACAGTTGAATGCTGCCTTCTTGGA
AAAACTCGACTGGGACAGGATCAAGAATGATAAAAACACACAGGAAGATT
TTGCTAAGAAAGGTAACATACCTCTTCCGAAATTGAAAGAAATTTTCGCT
AAAGGAGCTACACGATCAGATATTGAGAAGGAAACACTGGCTTTGTTAAC
TAAAACCATCAAAACTCAAGATAATTTGGCAGAATTGTTCAAGTATGAAA
TGGGAGCAGTGGTAGAGGAAAGCAAAGGGAATAGTGAGTATCTTTTTGTG
TTTTTATCTGTGTACAAAGTTCTTTCGTCTCAGAGTGTGTTTCCGTCTAA
TAGAGATACAAAAAAAGGGGCTTTTCCTTTCAACAAAGTTCTGCAAAAAT
TCTGCAAAAATTAAAGAATCTTGTCTAATTTTTTGTTAAAAGTCCATTTC
GATCTGAGACAATCTCTACAAACTACTGATGCTTTCTTGTACATCGATTC
TTTAATCTTTCTGAATCCAGTGGTTAGGGTTTCACCCGTAAACTTAGGTC
CCAGCTGAAATTTGAATAGGCATTATTTGTTATCATTGTTTCAAAAATCA
CTTGTCAAAATGTTAGTACGTCAGCATCAAGGAACAACCAACATGCATAA
AAATAATAAAAATAGAGTGGGATTTCCATTAATCGAACTTATTATTCAAA
TCTTTTTATAACCGGAACACAAAACTCCGTCCCCGTCAAGGGGAGACTCT
GGTAAATTAATAATCTCTACAATTTTAATTTCTCTGCAATTCGAACACTT
CAGGAGTCCAGTGCGAATTCGAATTTGCGAAATTCAACTATATTATCATT
CTAATTGTGCTACAGTATCGGCTACATTATTTTATTTCATCAAATTATAA
AGTTAAATTTGAATAATTACTACATTGTCAAGTGGCAGTCGACGTCAAGA
CAATCCCCAACTCCCGGACTATAAAAATAATTTTGGAATTTTAGTTCGAC
CTAAGGAATAGTTTTTACCATGAAATACATTTTTCATTAATATTAAATTT
GAATAATTACTACCTCGCAAAGTGGCAGTTGACTTTTACTCATTCCTTAG
CTCCCGGACTATAAAGATAATCTTAGAATTTCTGTTCGACCTAAACAATA
GTTTTCACCATTTAATACATTTTTCTTCAGGCTTCACGTCTCAAAGACAT
GATTTGACAAGTGACAGTAAAAGTGTCCCTGGAGAATTGGAATTTGGACA
ACCAGAAAACGTTACCAGTCATGCTAAAGGTCAGTGTCACCTCTCTTCAT
GATATTATGACGTAATGTTACATACGGAAGCACCCACAAATGACCGGGTA
TTAATTGTCATTAGTTTTGAATTTAAACAATGAAACTAATGGCAAACGCC
TGGGCTATTTTAAGAGCTTCCGTATGAAATATTTCATCACGAATAATCAT
TCTTTCTTTAATTTTCTTGACTACTTTTAGTCTCTAGTAATCTTGGATTC
CTTAATTCAGACGGGGATCTGGATAAAGAAATGGCGGATTAGGTTTTTTC
AAAAACAGATAGTTCCAAGACAAAAATTCTTTGTATGAGTCACTGAAGGC
TAACCCAAAATTAATTTTAAATTGCTTTGGAGAAATTCTTCAAGGCCATA
GAGTAGGTCTTCTAAAAAACTGTGCGATATAGTTTAATAATGATACGCTT
TCTCTAATTTGCCCAAGATACCCGAAAATCGCAAAATGTTTCTGCCCTCA
GAGTACGATCTCTCTTATTTTGAAAAGGTAAATATTAAAAATACAGTTGT
GTATGAGATGTTTTTTTTTTTGAAAACGACGAAACGACGTATTTTGAAAA
TATATTGATATCTCACACAAGATTAACTGTGAAACCTTTTCGTCGTTTTT
GTCATTTTTAGATTTCAAAACTCCAAAGGTCATACCAGACAGCTGCTCAA
AGTATTTGAAGATGTACACAAACGGTGAACTAACATTACCGGACTACGTC
AAACAGATCAAGATCTGCAAACAAAATGAAGTGATTGCCAAACAGATTGC
TAGAACAAGTATGTCTGTGTTTATTTTGCACTTTCTTTTTTTCACACTGT
AGTACTAGATATTTACAGTCGATATGTAATTTTGATATTCGTAATTTCTT
TTCCAACAAACTCATCCCGGAGAATCACGGTTAATGAGGGTGTTTTTGTA
AATAAAATGATATACGCAAATCAAGAATTCTTCAGCCGTGTAATAATTCT
CTTAATGGAAACATCCCGCAAAAACGAAAGTCGCCCTATTTTCAAGTGAA
ATATTGAAGTTTGGTTCTAGCGCTTTCTGTTTTTGTTCTAAAATATAACC
ATTAAAAGATATTTGTCAAAATCAAAATGATCTTTTCCATAAAATATTCG
TTTTAGATTGAGGCTCTCTAATTTGACGATCTAGTATTATGAACACTCCA
TTATTCGATCATGTTGAAAGTCACCGCAAACAAAGAACCATTATATACGC
TTTACCATTCTATATATGCTCCCTTATTCGATGAAAGTAAAATTTATCTT
GAAAATCGACTTTGAGAGTAGCGTCAATTGTAGATCTTGAAAATGGATTT
TTACTTATGATTCTAGCACCACAACAACGAGAAGCGGTGGCAACTATGAA
ACGAATTCAAGAAGAAGCCTACAAATATGCTCTTCATACTATGAAAAACT
ATACCCTGACTGCTCGAGAGGTATTATAATTCAACCCTTTAAGNGACTTA
CGCAAATCAAGAATTCTTCAGCCGTGTAATAATTCTCTTAATGGAAACAT
CCCGCAAAAACGAAAGTCGCCCTATTTTCAAGTGAAATATTGAAGTTTGG
TTCTAGCGCTTTCTGTTTTTGTTCTAAAATATAACCATTAAAAGATATTT
GTCAAAATCAAAATGATCTTTTCCATAAAATATCCGTTTTAGATTGAGGC
TCTCTAATTTGACGATCTAGTATTATGAACACTCCATTATTCGATTGTAT
TGAAAGTCACCGCAAACAAAGAACCATTATATACGCTTTACCGTTCTATA
TATGCTCCCTTATTCGATGAAAGTAAAATTTATCTTGAAAATCGACTTTG
AGAGTAGCGTCAATTGTAGATCTTGAAAATGGATTCTTACTTATAATTCT
AGCACCACAACAACGAGAAGCGGTGGCAACTATGAAGCGAATTCAAGAAG
AAGCCTACAAATATGCTCTTCATACTATGAAAAACTATACCCTGACTGCT
CGAGAGGTATTATAATTCAACCCTTTAAGTATAATTTAACCCCTTTAACA
ACCCTCCCTTCGTCGGTGACTTAAATTCTTTTTGGACCTACCCCGGTGGG
GTGGAGGTCCTATAAATTAACCTGTGTTCGTTCGTTCGTCCGTTCGTCCG
TTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTT
CGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCG
TCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTC
CGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCTGTTACCAAC
TTTTCTCAGGATTGAATCATAGGAATCTTTTGATTTTTGGTCCAAGGGTG
CAAAATGGTGGTGGCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAAA
TTTCTTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGG
ACTTTGTGAAAAATTGGATCGTTAATTTTTTCTGATTTTTTGCATGAAAG
TAGGGTACCATCATATAAAGTCAGATCGGTGTCAAAATCAAAAGGTCAGG
TCGTCGGGTCGAACCGTCGGGTCGTAATATCAAAGGGTCGGGTCGTAATA
TCAAAAGGTCAGGTCGTCGGGTCGAACCGTCGGGTCGTAATATCAAAGGG
TCGGGTCGTAATATCAAAGGGTCGGGTCGTAATGTCAAAAGGTCAGGTCG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCGAACGGTCGGATCGAAGCGTCGA
GCCAGACCGCCGGGATCCAATGCCGGTTTATCGGGATATTTAACATCGTT
CTGTAAAATATCATTTTTTAAAGGGACAATCCAATACTAAGCAAATCAAA
ATATTATGGTCACGTGTCTGGAATTTGATTGGTCGAGCGCGATAAAAGTT
TACAATTTGATTGGTCGAACGGGATTCTCACTTTCGTTTTCGTAATCTAA
ACAAACCGAAAAATACTTTGTGAATGAAAAATGAAAAATCTTTCGTGTAA
TTTCTTCTGTCTTGTATCATACTTATACGAAGGAAATTTTCTGTTTTGCT
ATGCCAAAATTGATTCACAAATGTAAATACTACACAAGAGTTTTTCTATA
CAGAAAGAGATTGTGAGATGAGAAGATATAAAAAGTTCTTTTTTGTTTTC
CTGTGTTCTTTGTGTTTCATCAAGAGCAGATGAACAAAATAACAAATAGT
AAATAATGCATAAAACATTTTTTGAAAAAAATANGTTTTCCTGTGTTCTT
TGTGTTTCATCAAGAGCAGATGAACAAAATAACAAATGGTAAATAAAGCA
TAAAACATTTTTTGAAAAAAATAACATACATTACAAAATTCCTGTATAAA
CATTTGGAAATACTTTATGGCTTCACTTTTAACAAGAGTGATGCAAAAGT
ATTTGAATAATAATATGACCTCCTCTTTGAAGTTGCCTTCCAAAATATTT
CTTTCCATTCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAATATTCCACGTTCACTCAAGTTAACAAC
GTAAATAAAATGTAAACAGTTCTTCTTACAGCAGCATATCCATAATACCA
CTGTAAAAAATGCAGCTATGTCCATCAATCACGAAACAAACTGGTACATG
AAAAATATGTTCAACTGTTCCCAAATCATAGCATGTACGAGGACTTTAAA
AAAGGGTGCAGAGATATGTAGCTTTAGAGTCGAACCATGCCAGAAGCACA
AGAAGACTAAGTCCCTTGATCGATGGTTTGATCTTAATTTTCAATGATAG
TCACAGGATTTTAAATTTAATCAAATCAATGTGTCCTACTGCTACTTCCT
CAACATTATTATTTCATAAAATTCCAAATCAGTACAATATGATGCTCAGA
ACCTCAAAAGCTCAGAGTTTTTCGTTCATCGTAGAGTTACTTTTCACTTC
ATTTTATTTATTTGGTTCATGCAAAATCTCATGATACAGTGCTTTTATCG
AGAAAATAATATACGCGTTCCATGATTCTATCGAAGTATTCTGAAGTTAT
GTAGACTACAGTCTCCAGAGTTGATTTTTCAAGTCATTGGATGAACAAAA
ATGTCCCATATTTTGAAGTACGAACCATGAAAATCTTCTTTGAAAAAGGC
TTTCTTGTCTTGATGAGTTTCATACACTTCTCAGATCCATATATGCACAC
TTTCAAGAGATGAAGTCTTTCTTGTCTCTTGTTGATGAGTTACATTTCAC
TTCTCAGATCCATATGCACACTTTCGAGAGAAAATAGAAATCTCTTTCTC
CTCTTGAGTGTTCAAAATTGACTACATTGTTATTTAACTGAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGAAAGAAGC
AAGAGAAGAGATAGTTCTGTATAAATTGGTTAGCAAAAGAATTCAGCCTT
GTTGGAAATATCTTCTTGTATCTTCAGCATCATAGAAATATGAACATTGA
AACTTTGCACAAAGATAGTTGAATAAGAACACTTCATGATTTTGATAATA
TAAACATGTTATAGACACCTGAAAGTATAATTATTTAAATCAGTGGTAAA
AATATAAACATTTCACTGATCGAATTATTTCGCTTCCATTTTGCTTTCAC
TTTTGTTCTTAGTATTATAGTATTTAGTTTATAGTATTCTGCGGAACGAG
ATTTTAACTAATCTGATAAGCCCGATAAACCCGATAATCCGGCATTGTAT
CCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
CCGGCAGTCTGGTTCGACGCTACGACCCGGCCGTTCGACATCACGACCCG
ACCTTTTGATATTACGACCTGACCCTTCGATATTACGACCTGACCTTTTG
ACATCACGACCCGACGGTTCGACCCGATGACCTGACCTTTTGAGATTACG
ACCCGGCGGTTCGACCCGACGATCTGACAGTTTGACATTACGACCCGACG
GTTCGACCCGACGATCTGACAGTTTGACANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCGCATGTTTATCTATAAGAATCACTATTAATAAGCATATATCAAT
GTTCTTAGTCAAATTACTCAATTTTTTCATGAGATAGATGTTTTTTTTTG
CTCATTGGGGCTTACTTTTGATAAATATTAGTGTTTCGACATGAAATTTT
GGCTGCTTGGCGTTTTTTTATAGAAAAACTGGCCAAATTCGATATTTTTT
TATAAGCACATTATCAATTACTTAGGTATTGCCTTTTTTCGAGATTGGCT
CTTTCATTCTTTATGAATTTTTGCACAAAGATACATAACTATAAGCCCTC
GAATGTGACGCAGCCCGATTTCGAAAAAAAATGTTTTTGGGCAAATTTGG
GCCAAAAAACAGCTAAAAAACGGGTTTTTTGGACTTTGTGAAATATTGGA
TCATTGTTTTTTTCTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCATCTCTAT
CTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGCCAAATTA
CTCAATTTTTTTGATGAGATAGATGTTTTTTTTGCTCACGAAGTCTTGAA
TATGAAAGAATATTTCAAGAGCATGAAATTTTGTTTTCTAAACGTTTTTT
TTATAAGAAACAAACGACTAATTTTGATAGATCGTCACTGTTTATGTTCT
GAATGATTGTTTAATGGTCACGTCACGTAGATATCAATTATATATGTGTT
AATACATAACCAGGTAGGTCCATAAAAGTATCACTTGTTCTTTGACTATT
TTGGGTGACCTACACAATTGGAATTAGAGAAGAGAGAAGGTTTTCAGGGC
CACTTTTGCAGCAAAATTTGACAACAACCCCCCCTTGTTAGTTACTTGAA
GTCTTTGACACTTTTGGGATTCTATACAATTGTAATTAGAGAAGGGAGAA
AGCTTTAAAGGCCACTTTTGCAGCATGGATATTGTCCAGAATACCCCCAT
TCTTGTCGGTGACTTGAGGCCTAATTAAAGAAGGTTGAAGGTTATTTTGG
TCACTCTTGTAGCATGGATATTCCAAAAGGGATGTTTTGAGCATACCTGG
GAAAAAACTTTTTATATAGACTTCTCCTGAAGTTGGGCGCCTGATCTATA
ATTATGTCAAATTCCACGCTAATAACAACAGCACTTTGACAACAGTCTTT
GGCGAGATTATTGCATACTCGGGCGAGAAATCGTGTCAAACTCCTTCACG
TTTGTTTTCTTTCCTTATCCCTTAGCAAGCCAATGCGGTCATGTCACAGT
GGCGCTCTACAAGTTTCAGTGGTAAAAACGCAACAGCCGGTGGCATCATT
CCAGATGCAGTCAAGATGTTTATGACCCAACAAAACAAAACAATCCCACA
AGATTCGAATCTTGATTTCGTCAGCAAAAAATCAACGGATCCTCTTGCTC
TTTTCAATTCCCAGCAACAAAAAGCTTTAAACCCGGTCAAGAAGACAGTG
ACACCTGCGGCACCAAAGATTCTATTAGCGACACCAAACGCTGGCGGAGC
CGCTTTACCTCTCACTAACTCCTTAGTTGAAGCCATCAAAGCTAGCAGTA
AGGAAGATCCCTTAGCTTCTATTTTCCCAGGGCAGATACCAAAATCAGTA
GCAGCTTTAGAATCCAAACCTACGGTCACCGATGATGCGATCGCAGCAGA
AGAATTCATGGCGAGCCTTGCGAATCCCTTATTCAAACAGATGCCTGTTG
ACAAATCACTTGTTGCCGCCCTCAGAAGCATGGGCGGAGTTAGCATCAAT
ACCCCAAATCCAAAATACCAGCTTTTGCCTGGTCTACAAAAACGACGAAA
ACGCTCCCTCAGTTCTGCAGACACACACAGACATTTTGTTTCTAAAGTTT
TGAAAAAGCATCTGCGAAGGAGACGTGAAGCAGCCGGGATCACGAAACCA
ATGGAACGCTCCAGCATGGAGACTCCTGTTCGTATGACGTCACAAGAAGG
TCCAAAGCTTTTGGATAAGATCAGAGATATGGGGCGTGTTATAGCTACCC
CTTAGATGAATATTTTGGATATATATTTTACGCTTTATTTGTATAAAGCT
TAATTTTGGTGCGATAAAATTCAGCCGGGCATAATGTTTTTAGGTTTCAA
AGTAATTGGCAGCTCTTTATAAAACACATTAGGTATAATGTGCTAATCTT
GAAGAGCTTTAGACAAACTGAAACAAAATCGAAAATATTATTGAAATCTT
GTGTATAATCAACACCGCAGTATGCTCATGTCAGAGCTCAAAATATCTGA
ATAGCAGATTTAGGAGACCTTTTTTCAGCATTTGTAATGTTGTGTCATTG
TCATTCATAAATTTAGACGAAATCTTTATTCAAGAGAAAATTTTATGTTG
TAAATATATTGAACTGTGTTAGTTATTTTAAAGAGAAATATTAAAAACAA
AACAACTTTTAGATGTTTTTCAAGATGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031272XLOC_031272Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049262-exon-scaffold_154-1575043694:262565..262614TCONS_00049262-exon-scaffold_154-1575043694:262565..262614Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1575043694:262064..262173TCONS_00049262-exon-scaffold_154-1575043694:262064..262173Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1575043694:260317..260582TCONS_00049262-exon-scaffold_154-1575043694:260317..260582Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1575043694:259827..260002TCONS_00049262-exon-scaffold_154-1575043694:259827..260002Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1575043694:258432..259683TCONS_00049262-exon-scaffold_154-1575043694:258432..259683Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1575043694:257436..257534TCONS_00049262-exon-scaffold_154-1575043694:257436..257534Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1575043694:256657..256803TCONS_00049262-exon-scaffold_154-1575043694:256657..256803Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1575043694:255459..255562TCONS_00049262-exon-scaffold_154-1575043694:255459..255562Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1575043694:249033..250239TCONS_00049262-exon-scaffold_154-1575043694:249033..250239Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1510915933:262565..262614TCONS_00049262-exon-scaffold_154-1510915933:262565..262614Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1510915933:262064..262173TCONS_00049262-exon-scaffold_154-1510915933:262064..262173Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1510915933:260317..260582TCONS_00049262-exon-scaffold_154-1510915933:260317..260582Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1510915933:259827..260002TCONS_00049262-exon-scaffold_154-1510915933:259827..260002Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1510915933:258432..259683TCONS_00049262-exon-scaffold_154-1510915933:258432..259683Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1510915933:257436..257534TCONS_00049262-exon-scaffold_154-1510915933:257436..257534Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1510915933:256657..256803TCONS_00049262-exon-scaffold_154-1510915933:256657..256803Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1510915933:255459..255562TCONS_00049262-exon-scaffold_154-1510915933:255459..255562Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1510915933:249033..250239TCONS_00049262-exon-scaffold_154-1510915933:249033..250239Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1491911889:262565..262614TCONS_00049262-exon-scaffold_154-1491911889:262565..262614Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1491911889:262064..262173TCONS_00049262-exon-scaffold_154-1491911889:262064..262173Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1491911889:260317..260582TCONS_00049262-exon-scaffold_154-1491911889:260317..260582Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1491911889:259827..260002TCONS_00049262-exon-scaffold_154-1491911889:259827..260002Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1491911889:258432..259683TCONS_00049262-exon-scaffold_154-1491911889:258432..259683Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1491911889:257436..257534TCONS_00049262-exon-scaffold_154-1491911889:257436..257534Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1491911889:256657..256803TCONS_00049262-exon-scaffold_154-1491911889:256657..256803Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1491911889:255459..255562TCONS_00049262-exon-scaffold_154-1491911889:255459..255562Clytia hemisphaericaexon
TCONS_00049262-exon-scaffold_154-1491911889:249033..250239TCONS_00049262-exon-scaffold_154-1491911889:249033..250239Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:249033..262614 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.390325	1.2772	0.94089	0.736411	0.119325	0.0943446	8.3384	2.20826	4.87874	3.46484	10.602	6.95792	13.1715	10.3722	7.99626	24.367	12.7708	19.599	0.0588039	0.0615739	9.74448	10.8489	11.2938	9.89275	0.194205	0.0542581	2.31564	1.49008	0.000364988	0.689123
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049262 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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