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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049247 ID=TCONS_00049247|Name=TCONS_00049247|organism=Clytia hemisphaerica|type=transcript|length=1563bp
AAAATCACTGTCATCTAATGATAAGTACTGTAAATGAACATAAAAAAGTC
ATGTAGCTCTATCATTTGACTGATAGAAAAGGATACAAAATGGCTTCTTA
TGCATCTCAAATAGTTTTCATGTTTATTGGTATATTTTGTTCGGTTATCA
TTCAAAAATGGGATCAGAAATATTTATTTGATGCTTTGGTATGGTTACAG
AATTACTACATGCCAAATTCAACATCTGTTGGTACTTCAATAGCTTTATT
AACATTGGTTGAACAGAAAAAGAAATCGTTTAGTGTGGCTGTATTACCGA
CAAAAGAAGTAGCTACTGAAACAGATTGGATTCTAAATAATGAAGTACAA
TCCATTCTAAACAAGGCAATCATGTACAAAAACCAAGGCAAAACTGAAAA
AGcattaaaacttttgaaacagtGTAAAGCTCTGAACCCAAAACATCCTG
ATGTATTGAATTTTTACGGTGAAGGAATTGAATCGAAAGATGTTATCACA
GCTGAGCACCATTATGCTTTAGCATTGGTGATACAGCCAGGGCATTTAAA
AGCTACTGCTAATAGACGTCGATGCTTACCAAGAGTGAAAGAATTAGATT
TGAAAATGTTGAGACGTATCGAACAGAAACGTGAAGCTCTAATGAAAATA
CCTGAAGGAAATTCAGCGTTAAAAAGAGCAAAGCTGGAATCATACTACAA
ACATATTTATCATTCAAATGGTATTGAAGGTAATACAATGACTCTATCCA
TGACTCGATCaattttagaaaccaaaatggCAGTCGGAGGAAAAAGCGTC
TTAGAGCATAATGAAGTCTTAGGGATGGATGCTGCGTTACAATATATTAA
TATCACGTTGCTGAACGAAATTGGACCTGTTACTATTCAACATATGCTAC
AAATTCATAAGAGAGTATTAGGTTATGCGCAACCGTTAGATGCCGGGCTC
TTTCGAGATTCTCAAGTTTACGTTGGAGAACATATCCCACCTAGTCCAGT
TGATGTGCACCAATATATGGAAGCTTTCCAGCGCTGGTTATTGTCGACAG
ATGTTGAACATTTGCATCCTATAGAACTAGCAGCTTTGGCGCATTATAAA
TTGGTATATATACATCCATTTACTGATGGCAATGGTAGAACTTCACGATT
ATTAATGAATTTGTTTTTAATGCGGGCTGGTTACCCGCCTGTTATTATTC
GTAAGGAAGACCGTTTTAAATATTACCAACATTTGCAGACAGCTAATATT
GGGGATGTGAGACCATTCATAAGATTCGTGGCCACATGTACTGAGGaaac
tttagatgaatacttatCTTCAGTAACTGTTGGTAAATTACAAATGCAAG
ATCCATCAGATTCGGCAAAGAAACGGACTGATATTATAGACTATAAAGAA
GAATGTTTTAATCCATTCCACCAAGCTTCATCATTGACAGATCCAGAGGA
CCTTGAATTGAAAGGACGATGTGAAGAAATtatgaaaagtgaaaattatG
AGGAATAGTTTTGACtacttttttaagttttcccttgacccattcaacga
atttaggtgggcc Run BLAST on NCBI protein sequence of TCONS_00049247-protein >TCONS_00049247-protein ID=TCONS_00049247-protein|Name=TCONS_00049247-protein|organism=Clytia hemisphaerica|type=polypeptide|length=472bp
MASYASQIVFMFIGIFCSVIIQKWDQKYLFDALVWLQNYYMPNSTSVGTS
IALLTLVEQKKKSFSVAVLPTKEVATETDWILNNEVQSILNKAIMYKNQG
KTEKALKLLKQCKALNPKHPDVLNFYGEGIESKDVITAEHHYALALVIQP
GHLKATANRRRCLPRVKELDLKMLRRIEQKREALMKIPEGNSALKRAKLE
SYYKHIYHSNGIEGNTMTLSMTRSILETKMAVGGKSVLEHNEVLGMDAAL
QYINITLLNEIGPVTIQHMLQIHKRVLGYAQPLDAGLFRDSQVYVGEHIP
PSPVDVHQYMEAFQRWLLSTDVEHLHPIELAALAHYKLVYIHPFTDGNGR
TSRLLMNLFLMRAGYPPVIIRKEDRFKYYQHLQTANIGDVRPFIRFVATC
TEETLDEYLSSVTVGKLQMQDPSDSAKKRTDIIDYKEECFNPFHQASSLT
DPEDLELKGRCEEIMKSENYEE Run BLAST on NCBI transcript from alignment at scaffold_154:875987..884487+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049247 ID=TCONS_00049247|Name=TCONS_00049247|organism=Clytia hemisphaerica|type=transcript|length=8501bp|location=Sequence derived from alignment at scaffold_154:875987..884487+ (Clytia hemisphaerica)
AAAATCACTGTCATCTAATGATAAGGTTTGTATTTTTGAATTCAGGCAAA
CCGAGTGTAATATGTAAAAATTGATCAGTCAATCGAGTTTAATGGACGGT
TTTTACAATCCAGAccacccccgcgctcgataggatcgatcatcggaacg
gctcgatgacggatcgatatgtgatcgatggNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNcctatccggatcgttaagtaatccatcgatcacatatcgatccgt
catcgagccgttccgatgatcgatcctatcgagcgcaggGGTCTGGTACA
ATACAATCAATAGGACCAgcccaggggatgtcaatcgaaaaattcgatta
ccgaatcaatcgaacttaatcgaagccaatcgaatgattgattttcgatt
agccgatttgatcgaacgccaatcgaatttcacatcttttttttgattgg
attcgattaccgttcgattggtgttcgattgacgttcgattagtttcgat
tagCTTCGATTGCGTATACTTTTCGATTGATTTGATTAgttcaatacacc
gtttaggagtgtcgactgcgcacgcgccaatccaattttccattgttttg
attttagcgatcacggaaaattcacgCACTcatcactctcctccgtaaaa
aaacggtaggtaaacatctggttctcataaggaaacatagcagaaaaacg
gtaggtaaagaactccttttaatcataacttcttttcctcttgatgaatt
tttgtgaaattttcaggagagacttataaaattatcattgatatccatgt
tcaaatatctaaatcattctctttaaaggagagacaaaaattcacaatgt
ttacattcctctaacctttcacagtactaaagtgcgcatttttacctacc
atttttaccgggcctctgcaatggagtaccgtgaaatggcgagactccta
aactGTGTATTAATGTTCGATCAATTCGATTTatgttcgattggcattcg
attaattcgatttatGTTCGATTGGCATTAGTTTTATCCAAACTACTCCC
ACGCAGCAATTTATACTCCGGATTTCCCCctttcagttagtcacactagc
gtcccgccaaaatgcgtatcaaagattaatgctgcgaaagcgctatatcg
tttacttgactcgcaagtTATAagatgcgccgcaaaacttctaaagggat
ttatgaaaaaataacccggtgctttttaatgaaattaacattttcaaaaa
ctatgagaaatagcctaaaatttgagctatggatgaaaaaatttgagcca
agccaaccttgaaaactaatttgaagatcaacttcccaagaaaaagatct
acgagGGAGACGGAACCCTCCtggatccgcgcaccgccggataggctact
tcccggaaattttgccggccctcaaacactgacccatttacatgtgcgga
atttattttactttagcgtataaacaaggccttaaaaaatcgaagcgctg
cctcgggaattgaatgacaaaatttggttggttgatattctggttACTGC
ACGTTCACAATCggtcattttgtcattttgatttcctagtgtgactaact
gcctagTTCCGGTTTTTCTCCGATTTCTGAATACAGTAAAACAACCGTag
tacctcttttttacgtgttttttacacttttcgaaaagtgaattttgact
ttaaaagctcataagtagagaacaagttggtcaaatttaaaaagtgatgg
ctcaaattttaagttaggatatctactttctaaatatcaaaactccaagc
actttaggacatttgttcggcctcaagacgtcgggaaacgtctgaacttt
ttcgtgggtcaccagGTATAGTGCTGGttgacaaagataaacaaacatcg
actgtaaaaAATCATACGAGAAGAGAGTTTGTCTTTATTAAAGGAATCTG
ATCtacatgaaaaaatttaaagtaacgtttataccgcaattgcagtatac
cgcaattgagggatatCCCTGACTgattaatgaaattgaatttgtcacat
tatATTTGAAAGCATCACTGGTCGAAATATCGAATAAAGTAAAAAATGTG
AGGTTTCACTTCCATGAGTCAGctcattttaaaaaaatatgcgTGTGCGC
AGCTAGTTTTCACATGATTAGCACGGCGAGCGCTATCGTTATTTATATTA
CGGATATTATTATATTGCGGATATCTTGCTCCGAAACACCAGAAGTGCTG
TGGAATCTTCCGGTGTTCCGGAGCACGAAAAGAACGGCACGGACGTTTCC
AGAGTGCCAGGAGGGTCCTCATTCGattaaattcaacaaaaaatattaaa
gtTTGACAAATTTGCAGCCTACCTAAAGTACTGCTTCTGGAAAGTGCaac
aaaaatcagatttttgaagtttgcagAAAAAACGCCAGAAATTCAGtaca
gtatgtgaatagagcagtgaaaaatacaacttttctatttttctttattt
tagaagttctagaaatgaaaataaaaagctataccttattacacgaatat
taccaGTCATAGACGTGgtgtggtgtccttgaaaaagcaaatacaatttg
tgttaattttttgtgtgTTAAATTCAAGGCCATTGAATACTTtcctagta
atatttgtgtaataaggtaatcaCTTTGCGTATcctttgcttgagaaaat
gattaacagattaaaaaatttccaccGGTGAATAAGTTCCCAGGCTTTCT
GCAGGGGTTTTTTTTCAACTTGGCCTCAATCCTTGAACCCTGACTcatga
gttttgattttttttaaatagtagCACAGTTGCGGCAGATCTTTTTATTG
GAAGTTGTTTGAATGTTTACAAGGTTCTTGatagaaaatcttttatgtGA
TTGTCAAAGGATGACAGTATTAATTTTGTTACAtctgaaaaattgatgtt
tgtgagtGAGTGCACTTTATATAGTTTTGATTTCTATTGAAGAATTATAA
TCTGATTTTCATGTCACTAGATGCTATGGGTATTAGGTGgaggatgtcaa
cattagaccaaattACGGTAATAAAAACATAATGAACACTAGCCAGAAAA
GAgctgtttcattttcaaaaatgtcaaatacacaaaatttaaaaaacatg
tccCTATTCTCGCTCAcagatttattttgttttctgaagtgcaataattc
aaaacatatctttttattttttattttatttttttaatactGTTTCTGTT
GTTATTGTTAATGACATTTTTCGACATCTTCTTGTACATAAAAATAATGG
TAGCTCTGTATAATTGTTTTTGGTATATAATTCAAAACATAGTTTAGATG
CTATTGGTATCTTTTTATTGCATCATTTTGAAAGGTTTTGTTTCAGTTTG
CATGATTTGGAGAAATTCAAATAATTTATGGAGCCTCAGAATTCTGTTTC
AGGGAAATTCATTCACTGATAAACTTAGATTTGAATTCTTTCTTTTAGTA
CTGTAAATGAACATAAAAAAGTCATGTAGCTCTATCATTTGACTGATAGA
AAAGGATACAAAATGGCTTCTTATGCATCTCAAATAGTTTTCATGTTTAT
TGGTATATTTTGTTCGGTTATCATTCAAAAATGGGATCAGAAATATTTAT
TTGATGCTTTGGTATGGTTACAGAATTACTACATGCCAAATTCAACATCT
GTTGGTACTTCAATAGCTTTATTAACATTGGTTGAACAGAAAAAGAAATC
GTTTAGTGTGGCTGTATTACCGACAAAAGAAGTAGCTACTGAAACAGGTA
TGTCAATATATTTTGTATCAATTAGCCGgaactaaagtctatttcaaatt
agctggcagtgttttttcaaacctcaataattTTTGAGAGAGTTTGAATC
AGAGGtattgtgctcgttaaaaagataatccggagtgAAATaacaatatt
ccactcctgtttgtctttttaCCCCCCGCCTCCCCCAGTACTAAGTGCAT
TTGACTATTGGCAGGTTGACACCACACCCTATTCTGCCCTGTTTAGTTGT
CTTGAGTAACTGGCACTCAAGGTAATCACTATTTGAAACATGTTAATACA
CTacagggccggcgaatcggttttaaaagtgagggggccaaatgatgtag
tgactaaggagggctcaccatggttggggccgatgGGCgggaaaaatgtt
gaaattatgGTACTCTACATTGGCCTAGAAGTggtctaaatttaattttt
gtgaagttattggaatgaaaaaatcaaaaaagttaggCGTTTTTATACTG
ATAATCACCAAAGAAAATACTACtatataataactaggtcacagtgtgga
tctaaacacactgaaacgaccgccttccttCACGCATCAcgcacgctcgc
gaaagagcgcgcgcacattgttaacgcctacatgtcatctccagtacatt
ttagatNcaatatagtcatttttcacgtctcgattattcaattacgaata
aaagacattcagggaagaaaaagagaaacacctgggtaatctagttaaaa
aaaccgaaagtaaatggtagacaaagtaatgagcccaggcaaaacgagat
tagcgtaccactatgaaaaaaaccgcctccggcggtcgataacaAAATGA
AACCTTTAAGTAAATAAAGCGGACTTTTATATGTTCAAAATTCATAACTT
AATAGTGTATGGATTGGTTTCCCGCTACGGTGGCTCTTATGGTGGCCGAC
TCGTGCTATTTGGCGAGTTATTAAGTTTTATTGGAACTCGAATGCGAgtt
aaaagataaacaaaagaaatcaaagtgaagacattCCAGTGTCAGACGGA
TTCCATTTTGCCACAGGCACgccttttcgaatgtttcttttattttcgaa
tgatttttttctattttcgattgtttttctattttcgaatgttttgatat
tagagtcaacgaatttgaatttctcaaaaactttgaaagaaaatttcact
ATAATTATTTGTTTCTAAAGAACCTCTTCAGGTTAGTTAAATGAGACCAG
AGATTTGGGTTTTATCAATGAAACTGTTTCCAACATTCTTCCCGTCCCTG
TCAAAGTCtaacaaaacaaagaataaCAAAATCTGCTGCTGCACTTTTCA
AACAACTTTAAGTAGACAAAGTAAAAGGGAAGAAGGCTCTCTGGAAAGAG
ATAAAGCCACAAAATAATATTACTATTAGATACTTACAACAACAATCTTT
CCCTATCATAAGCTTCTAAAATAACCACATACCTGTCAAGACCTGTTATT
GTATCTTTTCTACATTCGTTCAAAACGAACAAAATGTccaccaaaacaaa
tcaaaattccaCATTATAAGCTTGATAACAAATGTTCTAGACGGTATTTT
TTTTCTTGGTACACATATCTTATACTCTAAAACTTGTAATTGTATTAACA
AAACTTCTTTCGCCTTAAACAAACTACCCAAAATCAAAAACGAGTACTCG
AGCTTGACGAAAACCACTTCCCACTTCGAcggccatcttgaatttgaacA
GCGAAAGCTATGCTACTTCGTAACAGGTAGAGTACCTTTGCAAACTAATC
ATCATAAGCACTCGCCAGCAAAAATAGCCCTCTCGCCGAATTTCGGCGAG
AAGTGGCATTTTGTGGGAAAGAGGATTTACCGAGTATTAAgcagcctcta
taagaaacttttttcgctagaggatgagcagaagcctaattGAGAGTATG
CTTTAACAGTAAGTATacagtaataaaaattaaaattgtccaAAGTAATT
AAAGCAATGCTCTCGAGTCGACACAAACTCTCTACCAACTTAGATTTTTA
TATGGATATGGAGCAAAGAAAGATTGCTAAACCGTTTTGGCTTCATTGTT
GAACGTAGCCAAGTCTTTTTTCTCACCCTCTCACTCTTTttgttttgcaa
aaaagtgggggggggctACAGCACCATTTGATTGAGTTAAATTTATAGTA
CACCACCCCTTACAGCCTACAAGGTTCTAACTGCAAATTCCAAAAATCAA
ATATGAACCGTCATGATGTCTGGTACCAACTGCCTGACTGTATCAAGAGT
TATTGAAGTTTGAAAAAACACTGCCAGCTAATTTGAGATAGACTTTAATT
GACAGATTTAAGTTTCGCAGTTACCACTCATCTTTTGCCGTTCTCCTATA
GCAACTTTTATGCAGATTGTAAGTATAATGAATATAATCAAAGAAATGAT
GATTGCAGTAGACAACTTAGGTTTAGGGCTACATACACTACACAATATAT
TGTCAGACAATATATTGATGATATATTGCTGAGTGCCGGCAATATATTGA
AAAGTTGCAATATTCTAACAATATAGGAGGATTgtttatagaaaaaaact
ttctttttataatagattACCTGctatttacttcgtacattacggtccga
aaaggatattgtcaaatattgttcgtcaatatattgNaaactttcttttt
ataatagattACCTGctatttacttcgtacattacggtccgaaaaggata
ttgtcaaatattgttcgtcaatatattgtggagtctaagtagccctttag
GTTCCTAAAGGGTTAACGAGTGTTAGACCTTTGCTATAGTGTGACTTATT
TCCTATGACAATTTATGATTAAAAGAATTACCTTAATTAAATTGGTCGGA
ATAATTGATGGACTCCTCATGattggaaaagaaagaaaattagtttcaat
cagcgattccgaccttcctatcaTTCCTATTTTTAAAGAAGAGTGACGAA
ATTGGAAGAGGGATATCGACATtggaccaacttacggtagcgACACCAGT
GAAATCTCTGTTGTTATTAAGTTTTTCCACCTAGTGTGCCAGCATAAAAA
TAAATCCAATGATCCTATTTctctattattttttaaataaatttaatttc
attttttaacagATTGGATTCTAAATAATGAAGTACAATCCATTCTAAAC
AAGGCAATCATGTACAAAAACCAAGGCAAAACTGAAAAAGcattaaaact
tttgaaacagtGTAAAGCTCTGAACCCAAAACATCCTGATGTATTGAATT
TTTACGGTGAAGGAATTGAATCGAAAGATGTTATCACAGCTGAGCACCAT
TATGCTTTAGCATTGGTGATACAGCCAGGGCATTTAAAAGCTACTGCTAA
TAGACGTCGATGCTTACCAAGAGTGAAAGAATTAGATTTGAAAATGTTGA
GACGTATCGAACAGAAACGTGAAGCTCTAATGAAAATACCTGAAGGAAAT
TCAGCGTTAAAAAGAGCAAAGCTGGAATCATACTACAAACATATTTATCA
TTCAAATGGTATTGAAGGTAATACAATGACTCTATCCATGACTCGATCaa
ttttagaaaccaaaatggCAGTCGGAGGAAAAAGCGTCTTAGAGCATAAT
GAAGTCTTAGGGATGGATGCTGCGTTACAATATATTAATATCACGTTGCT
GAACGAAATTGGACCTGTTACTATTCAACATATGCTACAAATTCATAAGA
GAGTATTAGGTTATGCGCAACCGTTAGATGCCGGGCTCTTTCGAGATTCT
CAAGTTTACGTTGGAGAACATATCCCACCTAGTCCAGTTGATGTGCACCA
ATATATGGAAGCTTTCCAGCGCTGGTTATTGTCGACAGATGTTGAACATT
TGCATCCTATAGAACTAGCAGCTTTGGCGCATTATAAATTGGTATATATA
CATCCATTTACTGATGGCAATGGTAGAACTTCACGATTATTAATGAATTT
GTTTTTAATGCGGGCTGGTTACCCGCCTGTTATTATTCGTAAGGAAGACC
GTTTTAAATATTACCAACATTTGCAGACAGCTAATATTGGGGATGTGAGA
CCATTCATAAGATTCGTGGCCACATGTACTGAGGaaactttagatgaata
cttatCTTCAGTAACTGTTGGTAAATTACAAATGCAAGATCCATCAGATT
CGGCAAAGAAACGGACTGATATTATAGACTATAAAGAAGAATGTTTTAAT
CCATTCCACCAAGCTTCATCATTGACAGATCCAGAGGACCTTGAATTGAA
AGGACGATGTGAAGAAATtatgaaaagtgaaaattatGAGGAATAGTTTT
GACtacttttttaagttttcccttgacccattcaacgaatttaggtgggc
c Coding sequence (CDS) from alignment at scaffold_154:875987..884487+ >TCONS_00049247 ID=TCONS_00049247|Name=TCONS_00049247|organism=Clytia hemisphaerica|type=CDS|length=2838bp|location=Sequence derived from alignment at scaffold_154:875987..884487+ (Clytia hemisphaerica)
ATGGCTTCTTATGCATCTCAAATAGTTTTCATGTTTATTGGTATATTTTG
TTCGGTTATCATTCAAAAATGGGATCAGAAATATTTATTTGATGCTTTGG
TATGGTTACAGAATTACTACATGCCAAATTCAACATCTGTTGGTACTTCA
ATAGCTTTATTAACATTGGTTGAACAGAAAAAGAAATCGTTTAGTGTGGC
TGTATTACCGACAAAAGAAGTAGCTACTGAAACAGATTGGATTCTAAATA
ATGAAGTACAATCCATTCTAAACAAGGCAATCATGTACAAAAACCAAGGC
AAAACTGAAAAAGcattaaaacttttgaaacagtGTAAAGCTCTGAACCC
AAAACATCCTGATGTATTGAATTTTTACGGTGAAGGAATTGAATCGAAAG
ATGTTATCACAGCTGAGCACCATTATGCTTTAGCATTGGTGATACAGCCA
GGGCATTTAAAAGCTACTGCTAATAGACGTCGATGCTTACCAAGAGTGAA
AGAATTAGATTTGAAAATGTTGAGACGTATCGAACAGAAACGTGAAGCTC
TAATGAAAATACCTGAAGGAAATTCAGCGTTAAAAAGAGCAAAGCTGGAA
TCATACTACAAACATATTTATCATTCAAATGGTATTGAAGGTAATACAAT
GACTCTATCCATGACTCGATCaattttagaaaccaaaatggCAGTCGGAG
GAAAAAGCGTCTTAGAGCATAATGAAGTCTTAGGGATGGATGCTGCGTTA
CAATATATTAATATCACGTTGCTGAACGAAATTGGACCTGTTACTATTCA
ACATATGCTACAAATTCATAAGAGAGTATTAGGTTATGCGCAACCGTTAG
ATGCCGGGCTCTTTCGAGATTCTCAAGTTTACGTTGGAGAACATATCCCA
CCTAGTCCAGTTGATGTGCACCAATATATGGAAGCTTTCCAGCGCTGGTT
ATTGTCGACAGATGTTGAACATTTGCATCCTATAGAACTAGCAGCTTTGG
CGCATTATAAATTGGTATATATACATCCATTTACTGATGGCAATGGTAGA
ACTTCACGATTATTAATGAATTTGTTTTTAATGCGGGCTGGTTACCCGCC
TGTTATTATTCGTAAGGAAGACCGTTTTAAATATTACCAACATTTGCAGA
CAGCTAATATTGGGGATGTGAGACCATTCATAAGATTCGTGGCCACATGT
ACTGAGGaaactttagatgaatacttatCTTCAGTAACTGTTGGTAAATT
ACAAATGCAAGATCCATCAGATTCGGCAAAGAAACGGACTGATATTATAG
ACTATAAAGAAGAATGTTTTAATCCATTCCACCAAGCTTCATCATTGACA
GATCCAGAGGACCTTGAATTGAAAGGACGATGTGAAGAAATtatgaaaag
tgaaaattatGAGGAATAGATGGCTTCTTATGCATCTCAAATAGTTTTCA
TGTTTATTGGTATATTTTGTTCGGTTATCATTCAAAAATGGGATCAGAAA
TATTTATTTGATGCTTTGGTATGGTTACAGAATTACTACATGCCAAATTC
AACATCTGTTGGTACTTCAATAGCTTTATTAACATTGGTTGAACAGAAAA
AGAAATCGTTTAGTGTGGCTGTATTACCGACAAAAGAAGTAGCTACTGAA
ACAGATTGGATTCTAAATAATGAAGTACAATCCATTCTAAACAAGGCAAT
CATGTACAAAAACCAAGGCAAAACTGAAAAAGcattaaaacttttgaaac
agtGTAAAGCTCTGAACCCAAAACATCCTGATGTATTGAATTTTTACGGT
GAAGGAATTGAATCGAAAGATGTTATCACAGCTGAGCACCATTATGCTTT
AGCATTGGTGATACAGCCAGGGCATTTAAAAGCTACTGCTAATAGACGTC
GATGCTTACCAAGAGTGAAAGAATTAGATTTGAAAATGTTGAGACGTATC
GAACAGAAACGTGAAGCTCTAATGAAAATACCTGAAGGAAATTCAGCGTT
AAAAAGAGCAAAGCTGGAATCATACTACAAACATATTTATCATTCAAATG
GTATTGAAGGTAATACAATGACTCTATCCATGACTCGATCaattttagaa
accaaaatggCAGTCGGAGGAAAAAGCGTCTTAGAGCATAATGAAGTCTT
AGGGATGGATGCTGCGTTACAATATATTAATATCACGTTGCTGAACGAAA
TTGGACCTGTTACTATTCAACATATGCTACAAATTCATAAGAGAGTATTA
GGTTATGCGCAACCGTTAGATGCCGGGCTCTTTCGAGATTCTCAAGTTTA
CGTTGGAGAACATATCCCACCTAGTCCAGTTGATGTGCACCAATATATGG
AAGCTTTCCAGCGCTGGTTATTGTCGACAGATGTTGAACATTTGCATCCT
ATAGAACTAGCAGCTTTGGCGCATTATAAATTGGTATATATACATCCATT
TACTGATGGCAATGGTAGAACTTCACGATTATTAATGAATTTGTTTTTAA
TGCGGGCTGGTTACCCGCCTGTTATTATTCGTAAGGAAGACCGTTTTAAA
TATTACCAACATTTGCAGACAGCTAATATTGGGGATGTGAGACCATTCAT
AAGATTCGTGGCCACATGTACTGAGGaaactttagatgaatacttatCTT
CAGTAACTGTTGGTAAATTACAAATGCAAGATCCATCAGATTCGGCAAAG
AAACGGACTGATATTATAGACTATAAAGAAGAATGTTTTAATCCATTCCA
CCAAGCTTCATCATTGACAGATCCAGAGGACCTTGAATTGAAAGGACGAT
GTGAAGAAATtatgaaaagtgaaaattatGAGGAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049247-exon-scaffold_154-1491911889:875987..876011 | TCONS_00049247-exon-scaffold_154-1491911889:875987..876011 | Clytia hemisphaerica | exon |
| TCONS_00049247-exon-scaffold_154-1510915933:875987..876011 | TCONS_00049247-exon-scaffold_154-1510915933:875987..876011 | Clytia hemisphaerica | exon |
| TCONS_00049247-exon-scaffold_154-1575043694:875987..876011 | TCONS_00049247-exon-scaffold_154-1575043694:875987..876011 | Clytia hemisphaerica | exon |
| TCONS_00049247-exon-scaffold_154-1491911889:879785..880083 | TCONS_00049247-exon-scaffold_154-1491911889:879785..880083 | Clytia hemisphaerica | exon |
| TCONS_00049247-exon-scaffold_154-1510915933:879785..880083 | TCONS_00049247-exon-scaffold_154-1510915933:879785..880083 | Clytia hemisphaerica | exon |
| TCONS_00049247-exon-scaffold_154-1575043694:879785..880083 | TCONS_00049247-exon-scaffold_154-1575043694:879785..880083 | Clytia hemisphaerica | exon |
| TCONS_00049247-exon-scaffold_154-1491911889:883249..884487 | TCONS_00049247-exon-scaffold_154-1491911889:883249..884487 | Clytia hemisphaerica | exon |
| TCONS_00049247-exon-scaffold_154-1510915933:883249..884487 | TCONS_00049247-exon-scaffold_154-1510915933:883249..884487 | Clytia hemisphaerica | exon |
| TCONS_00049247-exon-scaffold_154-1575043694:883249..884487 | TCONS_00049247-exon-scaffold_154-1575043694:883249..884487 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_154 | supercontig | scaffold_154:875987..884487 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00049247 vs. Swiss-Prot (Human)
Match: FICD (Adenosine monophosphate-protein transferase FICD OS=Homo sapiens GN=FICD PE=1 SV=2) HSP 1 Score: 365.54 bits (937), Expect = 2.149e-120 Identity = 191/349 (54.73%), Postives = 240/349 (68.77%), Query Frame = 3
Query: 342 EVQSILNKAIMYKNQGKTEXXXXXXXXXXXXNPKHPDVLNFYG-EGIESKDVITAEHHYALALVIQPGHLKATANRRRCLPRVKELDLKMLRRIEQKREALMKIPEGNSALKRAKLESYYKHIYHSNGIEGNTMTLSMTRSILETKMAVGGKSVLEHNEVLGMDAALQYINITLLNEIGPVTIQHMLQIHKRVLGYAQPLDAGLFRDSQVYVGEHIPPSPVDVHQYMEAFQRWLLSTDVEHLHPIELAALAHYKLVYIHPFTDGNGRTSRLLMNLFLMRAGYPPVIIRKEDRFKYYQHLQTANIGDVRPFIRFVATCTEETLDEYLSSVTVGKLQMQD--PSDSAKKRT 1379
E ++ LN+A+ K QGK EKA KL ++P D L +G E KD+I A++ Y AL I P H KA NR R LP V+E+D + I+ K + +M IP+GNSAL+R E+YY HIYH+ IEGNT+TLS R ILET+ AV GKS+ E NEV+GM AA++YIN TL++ IG VTI +L+IH+RVLGY P++AG FR +QV VG HIPP P DV + M+ F +WL S + +LHP+E AALAHYKLVYIHPF DGNGRTSRLLMNL LM+AGYPP+ IRKE R YY L+ AN GDVRPFIRF+A CTE TLD L + T + + + P+ S K T
Sbjct: 105 EARAALNQALEMKRQGKREKAQKLFMHALKMDPDFVDALTEFGIFSEEDKDIIQADYLYTRALTISPYHEKALVNRDRTLPLVEEIDQRYFSIIDSKVKKVMSIPKGNSALRRVMEETYYHHIYHTVAIEGNTLTLSEIRHILETRYAVPGKSLEEQNEVIGMHAAMKYINTTLVSRIGSVTISDVLEIHRRVLGYVDPVEAGRFRTTQVLVGHHIPPHPQDVEKQMQEFVQWLNSEEAMNLHPVEFAALAHYKLVYIHPFIDGNGRTSRLLMNLILMQAGYPPITIRKEQRSDYYHVLEAANEGDVRPFIRFIAKCTETTLDTLLFATTEYSVALPEAQPNHSGFKET 453
The following BLAST results are available for this feature:
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